Psyllid ID: psy3349

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
Protein Sequence
MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHccccccccccccccHHHHHHccccccccHHHHHccccccccccccccccccccccHHHcccccccccccccccccHHHHccccccEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHccHHHccccccccHHHHHccccHccccHHHHHHcccccccccccccccccccccHHHcccccccccccccccccHHHHHHHccccEEcccc
Coil and Loop (DISEMBL)
mddkrfvgEVGLERWKELLRknperrlgsserdaeDVKKQAFFRHIQWEELLhrrvkppfvptvtdvgdvsnfdeeftsekpeltppkdprpltddeqnlfKDFTYMADWC
Flexible Loop (DISEMBL)
mddkrfvgevglerwkellrknperrlgsserdaedvkKQAFFRHIQweellhrrvkppfvptvtdvgdvsnfdeeftsekpeltppkdprpltddeqnlfKDFTYMADWC
Low Complexity Region (SEG)
MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC
Disordered region (IsUnstruct)
***************************************QAFFRHIQWEELLHRRVKPPFVPTVTDVGDV********************************DFTYM****
Disordered Region (DISOPRED)
*DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPK*********QNLFKDFTYMADWC
Disordered Region (DISEMBL)
MDDKRFVGEVGLERWKELLRKNPE***********DVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE***************RPLTDDEQNLFKDFTYMADWC
Disordered Region (DISPRO)
MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	111	2.2.26 [Sep-21-2011]
A1Z7T0	1190	Serine/threonine-protein	no	N/A	0.963	0.089	0.691	9e-39
Q16513	984	Serine/threonine-protein	yes	N/A	0.963	0.108	0.588	1e-33
Q16512	942	Serine/threonine-protein	no	N/A	0.963	0.113	0.616	2e-32
O08874	985	Serine/threonine-protein	yes	N/A	0.963	0.108	0.588	2e-32
A1A4I4	944	Serine/threonine-protein	no	N/A	0.963	0.113	0.607	3e-32
A7MBL8	977	Serine/threonine-protein	no	N/A	0.963	0.109	0.570	4e-32
Q8BWW9	983	Serine/threonine-protein	yes	N/A	0.963	0.108	0.579	6e-32
Q63433	946	Serine/threonine-protein	no	N/A	0.936	0.109	0.605	5e-31
P70268	946	Serine/threonine-protein	no	N/A	0.936	0.109	0.605	5e-31
Q8K045	878	Serine/threonine-protein	no	N/A	0.936	0.118	0.480	1e-22

>sp|A1Z7T0|PKN_DROME Serine/threonine-protein kinase N OS=Drosophila melanogaster GN=Pkn PE=1 SV=1

 Score =  158 bits (399), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 89/107 (83%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNPERRLGSSERDAEDVKKQAFFR I W++LL R+VKPPFVPT+
Sbjct: 1084 RFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTI 1143

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              + DVSNFDEEFTSEK +LTPPK+PR LT++EQ LF+DF+Y A+WC
Sbjct: 1144 NHLEDVSNFDEEFTSEKAQLTPPKEPRHLTEEEQLLFQDFSYTAEWC 1190

Pkc-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. May play a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion and transcription activation signaling processes (By similarity). Plays a role in regulating Rho-mediated dorsal closure during embryogenesis.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|Q16513|PKN2_HUMAN Serine/threonine-protein kinase N2 OS=Homo sapiens GN=PKN2 PE=1 SV=1

 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 83/107 (77%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLG+SE+DAEDVKK  FFR I W  L+ ++VKPPF+PT+
Sbjct: 878 RFLSTEAISIMRRLLRRNPERRLGASEKDAEDVKKHPFFRLIDWSALMDKKVKPPFIPTI 937

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
               DVSNFD+EFTSE P LTPP++PR L+++EQ +F+DF Y+ADWC
Sbjct: 938 RGREDVSNFDDEFTSEAPILTPPREPRILSEEEQEMFRDFDYIADWC 984

PKC-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. Plays a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion, tumor cell invasion and transcription activation signaling processes. Phosphorylates CTTN in hyaluronan-induced astrocytes and hence decreases CTTN ability to associates with filamentous actin. Phosphorylates HDAC5, therefore lead to impair HDAC5 import. Direct RhoA target required for the regulation of the maturation of primordial junctions into apical junction formation in bronchial epithelial cells. Required for G2/M phases of the cell cycle progression and abscission during cytokinesis in a ECT2-dependent manner. Stimulates FYN kinase activity that is required for establishment of skin cell-cell adhesion during keratinocytes differentiation. Regulates epithelial bladder cells speed and direction of movement during cell migration and tumor cell invasion. Inhibits Akt pro-survival-induced kinase activity. Mediates Rho protein-induced transcriptional activation via the c-fos serum response factor (SRF). Phosphorylates HCV NS5B leading to stimulation of HCV RNA replication.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 78/107 (72%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLGSSERDAEDVKKQ FFR + WE LL RR+ PPFVPT+
Sbjct: 836 RFLSAEAIGIMRRLLRRNPERRLGSSERDAEDVKKQPFFRTLGWEALLARRLPPPFVPTL 895

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
           +   DVSNFDEEFT E P L+PP+D RPLT  EQ  F DF ++A  C
Sbjct: 896 SGRTDVSNFDEEFTGEAPTLSPPRDARPLTAAEQAAFLDFDFVAGGC 942

PKC-related serine/threonine-protein kinase involved in various processes such as regulation of the intermediate filaments of the actin cytoskeleton, cell migration, tumor cell invasion and transcription regulation. Regulates the cytoskeletal network by phosphorylating proteins such as VIM and neurofilament proteins NEFH, NEFL and NEFM, leading to inhibit their polymerization. Phosphorylates 'Ser-575', 'Ser-637' and 'Ser-669' of MAPT/Tau, lowering its ability to bind to microtubules, resulting in disruption of tubulin assembly. Acts as a key coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-11' of histone H3 (H3T11ph), a specific tag for epigenetic transcriptional activation that promotes demethylation of histone H3 'Lys-9' (H3K9me) by KDM4C/JMJD2C. Phosphorylates HDAC5, HDAC7 and HDAC9, leading to impair their import in the nucleus. Phosphorylates 'Thr-38' of PPP1R14A, 'Ser-159', 'Ser-163' and 'Ser-170' of MARCKS, and GFAP. Able to phosphorylate RPS6 in vitro.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|O08874|PKN2_RAT Serine/threonine-protein kinase N2 OS=Rattus norvegicus GN=Pkn2 PE=1 SV=2

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 80/107 (74%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR   W  LL ++VKPPFVPT+
Sbjct: 879 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALLDKKVKPPFVPTI 938

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
               DVSNFD+EFTSE P LTPP++PR L ++EQ +F+DF Y+ADWC
Sbjct: 939 RGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFRDFDYVADWC 985

PKC-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. Plays a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion, tumor cell invasion and transcription activation signaling processes. Phosphorylates CTTN in hyaluronan-induced astrocytes and hence decreases CTTN ability to associates with filamentous actin. Phosphorylates HDAC5, therefore lead to impair HDAC5 import. Direct RhoA target required for the regulation of the maturation of primordial junctions into apical junction formation in bronchial epithelial cells. Required for G2/M phases of the cell cycle progression and abscission during cytokinesis in a ECT2-dependent manner. Stimulates FYN kinase activity that is required for establishment of skin cell-cell adhesion during keratinocytes differentiation. Regulates epithelial bladder cells speed and direction of movement during cell migration and tumor cell invasion. Inhibits Akt pro-survival-induced kinase activity. Mediates Rho protein-induced transcriptional activation via the c-fos serum response factor (SRF).

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|A1A4I4|PKN1_BOVIN Serine/threonine-protein kinase N1 OS=Bos taurus GN=PKN1 PE=2 SV=1

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/107 (60%), Positives = 78/107 (72%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLGSSERDAEDVKKQ FFR + W+ LL RR+ PPFVPT+
Sbjct: 838 RFLSAEAIGIMRRLLRRNPERRLGSSERDAEDVKKQPFFRTLGWDALLARRLPPPFVPTL 897

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
               DVSNFDEEFT E P L+PP+D RPLT  EQ  F+DF ++A  C
Sbjct: 898 AGRTDVSNFDEEFTGEAPTLSPPRDARPLTATEQAAFRDFDFVAGSC 944

PKC-related serine/threonine-protein kinase involved in various processes such as regulation of the intermediate filaments of the actin cytoskeleton, cell migration, tumor cell invasion and transcription regulation. Regulates the cytoskeletal network by phosphorylating proteins such as VIM and neurofilament proteins NEFH, NEFL and NEFM, leading to inhibit their polymerization. Phosphorylates 'Ser-575', 'Ser-637' and 'Ser-669' of MAPT/Tau, lowering its ability to bind to microtubules, resulting in disruption of tubulin assembly. Acts as a key coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-11' of histone H3 (H3T11ph), a specific tag for epigenetic transcriptional activation that promotes demethylation of histone H3 'Lys-9' (H3K9me) by KDM4C/JMJD2C. Phosphorylates HDAC5, HDAC7 and HDAC9, leading to impair their import in the nucleus. Phosphorylates 'Thr-38' of PPP1R14A, 'Ser-159', 'Ser-163' and 'Ser-170', and GFAP. Able to phosphorylate RPS6 in vitro.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|A7MBL8|PKN2_DANRE Serine/threonine-protein kinase N2 OS=Danio rerio GN=pkn2 PE=2 SV=1

 Score =  136 bits (342), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 81/107 (75%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           +++    +   + LLR+NPERRLG+ ERDAE+VK+  FFR + W  LL ++++PPFVPT+
Sbjct: 871 KYLSTEAISIMRRLLRRNPERRLGAGERDAEEVKRHPFFRDMDWPGLLAKKIRPPFVPTI 930

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
           T   DVSNFD+EFTSE P LTPP++PR LT  EQ+LF DF Y+ADWC
Sbjct: 931 TSREDVSNFDDEFTSEAPILTPPREPRILTLGEQDLFADFDYIADWC 977

Pkc-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. May play a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion and transcription activation signaling processes.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q8BWW9|PKN2_MOUSE Serine/threonine-protein kinase N2 OS=Mus musculus GN=Pkn2 PE=1 SV=3

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 79/107 (73%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR   W  L+ ++VKPPFVPT+
Sbjct: 877 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALMDKKVKPPFVPTI 936

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
               DVSNFD+EFTSE P LTPP++PR L ++EQ +F DF Y+ADWC
Sbjct: 937 RGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFHDFDYVADWC 983

PKC-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. Plays a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion, tumor cell invasion and transcription activation signaling processes. Phosphorylates CTTN in hyaluronan-induced astrocytes and hence decreases CTTN ability to associates with filamentous actin. Phosphorylates HDAC5, therefore lead to impair HDAC5 import. Direct RhoA target required for the regulation of the maturation of primordial junctions into apical junction formation in bronchial epithelial cells. Required for G2/M phases of the cell cycle progression and abscission during cytokinesis in a ECT2-dependent manner. Stimulates FYN kinase activity that is required for establishment of skin cell-cell adhesion during keratinocytes differentiation. Regulates epithelial bladder cells speed and direction of movement during cell migration and tumor cell invasion. Inhibits Akt pro-survival-induced kinase activity. Mediates Rho protein-induced transcriptional activation via the c-fos serum response factor (SRF).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q63433|PKN1_RAT Serine/threonine-protein kinase N1 OS=Rattus norvegicus GN=Pkn1 PE=1 SV=2

 Score =  132 bits (333), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/104 (60%), Positives = 78/104 (75%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLGS+ERDAEDVKKQ FFR + W+ LL RR+ PPFVPT+
Sbjct: 840 RFLSAEAIGIMRRLLRRNPERRLGSTERDAEDVKKQPFFRTLDWDALLARRLPPPFVPTL 899

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
           +   DVSNFDEEFT E P L+PP+D RPLT  EQ  F+DF ++A
Sbjct: 900 SGRTDVSNFDEEFTGEAPTLSPPRDARPLTAAEQAAFRDFDFVA 943

PKC-related serine/threonine-protein kinase involved in various processes such as regulation of the intermediate filaments of the actin cytoskeleton, cell migration, tumor cell invasion and transcription regulation. Regulates the cytoskeletal network by phosphorylating proteins such as VIM and neurofilament proteins NEFH, NEFL and NEFM, leading to inhibit their polymerization. Phosphorylates 'Ser-575', 'Ser-637' and 'Ser-669' of MAPT/Tau, lowering its ability to bind to microtubules, resulting in disruption of tubulin assembly. Acts as a key coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-11' of histone H3 (H3T11ph), a specific tag for epigenetic transcriptional activation that promotes demethylation of histone H3 'Lys-9' (H3K9me) by KDM4C/JMJD2C. Phosphorylates HDAC5, HDAC7 and HDAC9, leading to impair their import in the nucleus. Phosphorylates 'Thr-38' of PPP1R14A, 'Ser-159', 'Ser-163' and 'Ser-170', and GFAP. Able to phosphorylate RPS6 in vitro.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P70268|PKN1_MOUSE Serine/threonine-protein kinase N1 OS=Mus musculus GN=Pkn1 PE=1 SV=3

 Score =  132 bits (333), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 63/104 (60%), Positives = 78/104 (75%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLGS+ERDAEDVKKQ FFR + W+ LL RR+ PPFVPT+
Sbjct: 840 RFLSAEAIGIMRRLLRRNPERRLGSTERDAEDVKKQPFFRSLGWDVLLARRLPPPFVPTL 899

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
           +   DVSNFDEEFT E P L+PP+D RPLT  EQ  F+DF ++A
Sbjct: 900 SGRTDVSNFDEEFTGEAPTLSPPRDARPLTAAEQAAFRDFDFVA 943

PKC-related serine/threonine-protein kinase involved in various processes such as regulation of the intermediate filaments of the actin cytoskeleton, cell migration, tumor cell invasion and transcription regulation. Regulates the cytoskeletal network by phosphorylating proteins such as VIM and neurofilament proteins NEFH, NEFL and NEFM, leading to inhibit their polymerization. Phosphorylates 'Ser-575', 'Ser-637' and 'Ser-669' of MAPT/Tau, lowering its ability to bind to microtubules, resulting in disruption of tubulin assembly. Acts as a key coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-11' of histone H3 (H3T11ph), a specific tag for epigenetic transcriptional activation that promotes demethylation of histone H3 'Lys-9' (H3K9me) by KDM4C/JMJD2C. Phosphorylates HDAC5, HDAC7 and HDAC9, leading to impair their import in the nucleus. Phosphorylates 'Thr-38' of PPP1R14A, 'Ser-159', 'Ser-163' and 'Ser-170', and GFAP. Able to phosphorylate RPS6 in vitro.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q8K045|PKN3_MOUSE Serine/threonine-protein kinase N3 OS=Mus musculus GN=Pkn3 PE=1 SV=1

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 70/104 (67%)

Query: 6   FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVT 65
           F+   GLE  ++LL+K+PE+RLG+ ERDAE++K Q FFR   W+ LL R V+PPFVPT+ 
Sbjct: 770 FLSVQGLELIQKLLQKSPEKRLGAGERDAEEIKVQPFFRTTNWQALLARTVQPPFVPTLC 829

Query: 66  DVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
              D+  F+ EFTS  P LTPP     LT  +Q  F+DF ++++
Sbjct: 830 GPADLRYFEGEFTSLPPTLTPPVSQSSLTARQQAAFRDFDFVSE 873

Contributes to invasiveness in malignant prostate cancer.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
340716554	1712	PREDICTED: hypothetical protein LOC10064	0.963	0.062	0.766	3e-42
350404415	1689	PREDICTED: hypothetical protein LOC10074	0.963	0.063	0.766	3e-42
380014132	1775	PREDICTED: LOW QUALITY PROTEIN: serine/t	0.963	0.060	0.766	4e-42
307177860	1747	Serine/threonine-protein kinase N2 [Camp	0.963	0.061	0.766	5e-42
383860305	1758	PREDICTED: serine/threonine-protein kina	0.963	0.060	0.766	7e-42
321477444	1068	hypothetical protein DAPPUDRAFT_305606 [	0.963	0.100	0.747	8e-42
345488814	1831	PREDICTED: hypothetical protein LOC10011	0.963	0.058	0.757	1e-41
328777943	1556	PREDICTED: hypothetical protein LOC72592	0.864	0.061	0.833	2e-41
189235408	1066	PREDICTED: similar to protein kinase N2	0.963	0.100	0.747	9e-41
328714740	1065	PREDICTED: serine/threonine-protein kina	0.954	0.099	0.754	9e-41

>gi|340716554|ref|XP_003396762.1| PREDICTED: hypothetical protein LOC100648635 [Bombus terrestris]

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 92/107 (85%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNP+RRLGSSERDAEDVKKQAFFRHI W++LL RRVKPPFVP +
Sbjct: 1606 RFLSLEAIAIMRRLLRKNPDRRLGSSERDAEDVKKQAFFRHIAWDDLLLRRVKPPFVPVI 1665

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              V DVSNFDEEFTSEKP+LTPPKDPRPL+D EQ+LFKDFTYMADWC
Sbjct: 1666 HSVEDVSNFDEEFTSEKPQLTPPKDPRPLSDLEQSLFKDFTYMADWC 1712

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350404415|ref|XP_003487097.1| PREDICTED: hypothetical protein LOC100743934 [Bombus impatiens]

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 92/107 (85%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNP+RRLGSSERDAEDVKKQAFFRHI W++LL RRVKPPFVP +
Sbjct: 1583 RFLSLEAIAIMRRLLRKNPDRRLGSSERDAEDVKKQAFFRHIAWDDLLLRRVKPPFVPVI 1642

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              V DVSNFDEEFTSEKP+LTPPKDPRPL+D EQ+LFKDFTYMADWC
Sbjct: 1643 HSVEDVSNFDEEFTSEKPQLTPPKDPRPLSDLEQSLFKDFTYMADWC 1689

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014132|ref|XP_003691095.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase N-like [Apis florea]

 Score =  174 bits (442), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 92/107 (85%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNP+RRLGSSERDAEDVKKQAFFRHI W++LL RRVKPPFVP +
Sbjct: 1669 RFLSLEAIAIMRRLLRKNPDRRLGSSERDAEDVKKQAFFRHIAWDDLLLRRVKPPFVPVI 1728

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              V DVSNFDEEFTSEKP+LTPPKDPRPL+D EQ+LFKDFTYMADWC
Sbjct: 1729 HSVEDVSNFDEEFTSEKPQLTPPKDPRPLSDLEQSLFKDFTYMADWC 1775

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177860|gb|EFN66820.1| Serine/threonine-protein kinase N2 [Camponotus floridanus]

 Score =  174 bits (441), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 90/107 (84%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNP+RRLGSSERDAEDVKKQAFFRHI W++LL RRVKPPFVP +
Sbjct: 1641 RFLSLEAIAIMRRLLRKNPDRRLGSSERDAEDVKKQAFFRHIAWDDLLLRRVKPPFVPVI 1700

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              V DVSNFDEEFTSEKP LTPPKDPRPL+D EQ LFKDFTYMADWC
Sbjct: 1701 HSVEDVSNFDEEFTSEKPHLTPPKDPRPLSDLEQGLFKDFTYMADWC 1747

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860305|ref|XP_003705631.1| PREDICTED: serine/threonine-protein kinase N-like [Megachile rotundata]

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 91/107 (85%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNP+RRLGSSERDAEDVKKQAFFRHI W++LL RRVKPPFVP +
Sbjct: 1652 RFLSLEAIAIMRRLLRKNPDRRLGSSERDAEDVKKQAFFRHIAWDDLLLRRVKPPFVPVI 1711

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              V DVSNFDEEFTSEKP+LTPPKDPRPL+D EQ LFKDFTYMADWC
Sbjct: 1712 HSVEDVSNFDEEFTSEKPQLTPPKDPRPLSDLEQMLFKDFTYMADWC 1758

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321477444|gb|EFX88403.1| hypothetical protein DAPPUDRAFT_305606 [Daphnia pulex]

 Score =  174 bits (440), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 92/107 (85%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNPERRLG+SERDAEDVKKQAFFRH+ WE+LL RR+KPPFVPT+
Sbjct: 962  RFLSLEAIAIMRRLLRKNPERRLGASERDAEDVKKQAFFRHVHWEDLLARRLKPPFVPTI 1021

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              + DVSNFDEEFTSEKP LTPPKDPR L+DD+Q+LFKDFTYMADWC
Sbjct: 1022 RSMEDVSNFDEEFTSEKPVLTPPKDPRILSDDDQSLFKDFTYMADWC 1068

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345488814|ref|XP_001599463.2| PREDICTED: hypothetical protein LOC100114442 [Nasonia vitripennis]

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/107 (75%), Positives = 91/107 (85%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNP+RRLGSSERDAEDVKKQAFFRHI W++LL RRVKPPFVP +
Sbjct: 1725 RFLSLEAIAIMRRLLRKNPDRRLGSSERDAEDVKKQAFFRHIAWDDLLLRRVKPPFVPVI 1784

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              V DVSNFDEEFTSEKP+LTPPKDPRPL+D EQ LF+DFTYMADWC
Sbjct: 1785 HSVEDVSNFDEEFTSEKPQLTPPKDPRPLSDLEQALFRDFTYMADWC 1831

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777943|ref|XP_001121710.2| PREDICTED: hypothetical protein LOC725923 [Apis mellifera]

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/96 (83%), Positives = 88/96 (91%)

Query: 16   KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
            + LLRKNP+RRLGSSERDAEDVKKQAFFRHI W++LL RRVKPPFVP +  V DVSNFDE
Sbjct: 1461 RRLLRKNPDRRLGSSERDAEDVKKQAFFRHIAWDDLLLRRVKPPFVPVIHSVEDVSNFDE 1520

Query: 76   EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
            EFTSEKP+LTPPKDPRPL+D EQ+LFKDFTYMADWC
Sbjct: 1521 EFTSEKPQLTPPKDPRPLSDLEQSLFKDFTYMADWC 1556

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235408|ref|XP_971016.2| PREDICTED: similar to protein kinase N2 [Tribolium castaneum]

 Score =  170 bits (431), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 80/107 (74%), Positives = 91/107 (85%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRK P+RRLGSSERDAEDVKKQAFFRHIQW+ELLHRRV PPFVPTV
Sbjct: 960  RFLSLESIAIMRRLLRKIPDRRLGSSERDAEDVKKQAFFRHIQWDELLHRRVPPPFVPTV 1019

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
              + DVSNFDEEFTSEKP LTPPK+PRPLT+ +Q LF+DFTY+ADWC
Sbjct: 1020 HSMEDVSNFDEEFTSEKPHLTPPKEPRPLTEQDQYLFRDFTYIADWC 1066

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328714740|ref|XP_003245439.1| PREDICTED: serine/threonine-protein kinase N2-like isoform 2 [Acyrthosiphon pisum]

 Score =  170 bits (431), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 80/106 (75%), Positives = 89/106 (83%)

Query: 5    RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
            RF+    +   + LLRKNPERRLGSSERDAEDVKKQAFFR + W++LLHR++KPPFVPTV
Sbjct: 959  RFLSLEAIAIMRRLLRKNPERRLGSSERDAEDVKKQAFFRQVVWDDLLHRKIKPPFVPTV 1018

Query: 65   TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADW 110
              V DVSNFDEEFTSEKP+LTPPKDPR L DDEQ LFKDFTY ADW
Sbjct: 1019 NSVEDVSNFDEEFTSEKPQLTPPKDPRLLNDDEQQLFKDFTYTADW 1064

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
FB|FBgn0020621	1190	Pkn "Protein kinase related to	0.963	0.089	0.691	7.5e-36
UNIPROTKB|O44393	963	PRK2 "Protein kinase C-related	0.963	0.111	0.675	1e-35
ZFIN|ZDB-GENE-061207-42	983	pkn2 "protein kinase N2" [Dani	0.864	0.097	0.677	2.3e-32
UNIPROTKB|Q16513	984	PKN2 "Serine/threonine-protein	0.963	0.108	0.588	6.1e-32
UNIPROTKB|F1PHU4	845	PKN2 "Uncharacterized protein"	0.963	0.126	0.588	9.2e-32
UNIPROTKB|F1S4D4	969	PKN2 "Uncharacterized protein"	0.963	0.110	0.598	9.7e-32
UNIPROTKB|F1MFK1	981	PKN2 "Uncharacterized protein"	0.963	0.109	0.588	1.3e-31
UNIPROTKB|F1LPA4	983	Pkn2 "Serine/threonine-protein	0.963	0.108	0.588	4.4e-31
RGD|620146	985	Pkn2 "protein kinase N2" [Ratt	0.963	0.108	0.588	4.4e-31
UNIPROTKB|O08874	985	Pkn2 "Serine/threonine-protein	0.963	0.108	0.588	4.4e-31

FB|FBgn0020621 Pkn "Protein kinase related to protein kinase N" [Drosophila melanogaster (taxid:7227)]

 Score = 399 (145.5 bits), Expect = 7.5e-36, P = 7.5e-36
 Identities = 74/107 (69%), Positives = 89/107 (83%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLRKNPERRLGSSERDAEDVKKQAFFR I W++LL R+VKPPFVPT+
Sbjct:  1084 RFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTI 1143

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
               + DVSNFDEEFTSEK +LTPPK+PR LT++EQ LF+DF+Y A+WC
Sbjct:  1144 NHLEDVSNFDEEFTSEKAQLTPPKEPRHLTEEEQLLFQDFSYTAEWC 1190

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0006468 "protein phosphorylation" evidence=ISS;NAS

GO:0004697 "protein kinase C activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0007391 "dorsal closure" evidence=IMP;TAS

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0007472 "wing disc morphogenesis" evidence=IMP

UNIPROTKB|O44393 PRK2 "Protein kinase C-related kinase" [Pisaster ochraceus (taxid:7612)]

 Score = 396 (144.5 bits), Expect = 1.0e-35, P = 1.0e-35
 Identities = 73/108 (67%), Positives = 84/108 (77%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLGSS RDAEDVKKQAFFR++QWEELL R+  PPFVP +
Sbjct:   856 RFLSTEAIAIMRRLLRRNPERRLGSSRRDAEDVKKQAFFRNVQWEELLMRKTTPPFVPNI 915

Query:    65 TDVGDVSNFDEEFTSEKPELTPP-KDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFDEEFT E+P LTPP +DPR +TD EQNLFKDF Y ADWC
Sbjct:   916 NHPEDVSNFDEEFTQERPVLTPPTRDPRAITDQEQNLFKDFNYTADWC 963

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0071320 "cellular response to cAMP" evidence=IDA

GO:2000767 "positive regulation of cytoplasmic translation" evidence=IDA

ZFIN|ZDB-GENE-061207-42 pkn2 "protein kinase N2" [Danio rerio (taxid:7955)]

 Score = 365 (133.5 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 65/96 (67%), Positives = 78/96 (81%)

Query:    16 KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
             + LLR+NPERRLG++ERDAEDVKK  FFR I W+ LL ++VKPPFVPT+    DVSNFD+
Sbjct:   888 RRLLRRNPERRLGAAERDAEDVKKHLFFRDIDWDGLLAKKVKPPFVPTIQCSSDVSNFDD 947

Query:    76 EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
             EFTSE P LTPP++PRPL   EQ+LF DF Y+ADWC
Sbjct:   948 EFTSEAPVLTPPREPRPLNQHEQDLFTDFDYIADWC 983

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

UNIPROTKB|Q16513 PKN2 "Serine/threonine-protein kinase N2" [Homo sapiens (taxid:9606)]

 Score = 361 (132.1 bits), Expect = 6.1e-32, P = 6.1e-32
 Identities = 63/107 (58%), Positives = 83/107 (77%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLG+SE+DAEDVKK  FFR I W  L+ ++VKPPF+PT+
Sbjct:   878 RFLSTEAISIMRRLLRRNPERRLGASEKDAEDVKKHPFFRLIDWSALMDKKVKPPFIPTI 937

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFD+EFTSE P LTPP++PR L+++EQ +F+DF Y+ADWC
Sbjct:   938 RGREDVSNFDDEFTSEAPILTPPREPRILSEEEQEMFRDFDYIADWC 984

GO:0007165 "signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0042826 "histone deacetylase binding" evidence=IDA

GO:0032154 "cleavage furrow" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0030496 "midbody" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0030027 "lamellipodium" evidence=IDA

GO:0043297 "apical junction assembly" evidence=IMP

GO:0043296 "apical junction complex" evidence=IDA

GO:0010631 "epithelial cell migration" evidence=IDA

GO:2000145 "regulation of cell motility" evidence=IMP

GO:0004672 "protein kinase activity" evidence=TAS

UNIPROTKB|F1PHU4 PKN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 358 (131.1 bits), Expect = 9.2e-32, P = 9.2e-32
 Identities = 63/107 (58%), Positives = 82/107 (76%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR I W  L+ ++VKPPFVPT+
Sbjct:   739 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLIDWSALMDKKVKPPFVPTI 798

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFD+EFTSE P LTPP++PR L+++EQ +F+DF Y+ADWC
Sbjct:   799 RGREDVSNFDDEFTSEAPILTPPREPRILSEEEQEMFRDFDYIADWC 845

GO:2000145 "regulation of cell motility" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0043297 "apical junction assembly" evidence=IEA

GO:0043296 "apical junction complex" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0010631 "epithelial cell migration" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1S4D4 PKN2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 359 (131.4 bits), Expect = 9.7e-32, P = 9.7e-32
 Identities = 64/107 (59%), Positives = 82/107 (76%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR I W  L+ ++VKPPFVPTV
Sbjct:   863 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLIDWSALMDKKVKPPFVPTV 922

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFD+EFTSE P LTPP++PR L+++EQ +F+DF Y+ADWC
Sbjct:   923 RGREDVSNFDDEFTSEAPILTPPREPRILSEEEQEMFRDFDYIADWC 969

GO:2000145 "regulation of cell motility" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0043297 "apical junction assembly" evidence=IEA

GO:0043296 "apical junction complex" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0010631 "epithelial cell migration" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1MFK1 PKN2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 358 (131.1 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 63/107 (58%), Positives = 82/107 (76%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR I W  L+ ++VKPPFVPT+
Sbjct:   875 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLIDWSALMDKKVKPPFVPTI 934

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFD+EFTSE P LTPP++PR L+++EQ +F+DF Y+ADWC
Sbjct:   935 RGREDVSNFDDEFTSEAPILTPPREPRILSEEEQEMFRDFDYIADWC 981

GO:2000145 "regulation of cell motility" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0043297 "apical junction assembly" evidence=IEA

GO:0043296 "apical junction complex" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0010631 "epithelial cell migration" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1LPA4 Pkn2 "Serine/threonine-protein kinase N2" [Rattus norvegicus (taxid:10116)]

 Score = 353 (129.3 bits), Expect = 4.4e-31, P = 4.4e-31
 Identities = 63/107 (58%), Positives = 80/107 (74%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR   W  LL ++VKPPFVPT+
Sbjct:   877 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALLDKKVKPPFVPTI 936

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFD+EFTSE P LTPP++PR L ++EQ +F+DF Y+ADWC
Sbjct:   937 RGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFRDFDYVADWC 983

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0010631 "epithelial cell migration" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0042826 "histone deacetylase binding" evidence=IEA

GO:0043296 "apical junction complex" evidence=IEA

GO:0043297 "apical junction assembly" evidence=IEA

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=IEA

GO:2000145 "regulation of cell motility" evidence=IEA

RGD|620146 Pkn2 "protein kinase N2" [Rattus norvegicus (taxid:10116)]

 Score = 353 (129.3 bits), Expect = 4.4e-31, P = 4.4e-31
 Identities = 63/107 (58%), Positives = 80/107 (74%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR   W  LL ++VKPPFVPT+
Sbjct:   879 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALLDKKVKPPFVPTI 938

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFD+EFTSE P LTPP++PR L ++EQ +F+DF Y+ADWC
Sbjct:   939 RGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFRDFDYVADWC 985

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO;ISS;IDA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS

GO:0006915 "apoptotic process" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0010631 "epithelial cell migration" evidence=ISO;ISS

GO:0016020 "membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=ISO;ISS

GO:0030496 "midbody" evidence=ISO;ISS

GO:0032154 "cleavage furrow" evidence=ISO;ISS

GO:0042826 "histone deacetylase binding" evidence=ISO;ISS

GO:0043296 "apical junction complex" evidence=ISO;ISS

GO:0043297 "apical junction assembly" evidence=ISO;ISS

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISO;ISS

GO:0051301 "cell division" evidence=IEA

GO:0071777 "positive regulation of cell cycle cytokinesis" evidence=ISO;ISS

GO:2000145 "regulation of cell motility" evidence=ISO;ISS

UNIPROTKB|O08874 Pkn2 "Serine/threonine-protein kinase N2" [Rattus norvegicus (taxid:10116)]

 Score = 353 (129.3 bits), Expect = 4.4e-31, P = 4.4e-31
 Identities = 63/107 (58%), Positives = 80/107 (74%)

Query:     5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
             RF+    +   + LLR+NPERRLG+ E+DAEDVKK  FFR   W  LL ++VKPPFVPT+
Sbjct:   879 RFLSTEAISIMRRLLRRNPERRLGAGEKDAEDVKKHPFFRLTDWSALLDKKVKPPFVPTI 938

Query:    65 TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
                 DVSNFD+EFTSE P LTPP++PR L ++EQ +F+DF Y+ADWC
Sbjct:   939 RGREDVSNFDDEFTSEAPILTPPREPRILLEEEQEMFRDFDYVADWC 985

GO:0005524 "ATP binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O08874	PKN2_RAT	2, ., 7, ., 1, 1, ., 1, 3	0.5887	0.9639	0.1086	yes	N/A
Q16513	PKN2_HUMAN	2, ., 7, ., 1, 1, ., 1, 3	0.5887	0.9639	0.1087	yes	N/A
Q8BWW9	PKN2_MOUSE	2, ., 7, ., 1, 1, ., 1, 3	0.5794	0.9639	0.1088	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	111
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	6e-48
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-30
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-24
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-23
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-21
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	7e-20
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-19
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	4e-19
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-19
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-19
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-18
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	8e-18
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-17
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-17
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-17
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	4e-17
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-17
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-16
smart00133	64	smart00133, S_TK_X, Extension to Ser/Thr-type prot	1e-16
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-16
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	5e-16
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-15
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	9e-15
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-14
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-14
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-13
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-12
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-12
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	3e-12
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	5e-12
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	5e-11
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	7e-11
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-10
pfam00433	47	pfam00433, Pkinase_C, Protein kinase C terminal do	2e-10
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-09
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-09
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	6e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-07
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-07
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-07
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-07
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	5e-07
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	6e-07
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-06
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	7e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	9e-06
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-05
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	5e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-05
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	8e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-04
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.001
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.001
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.002

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  155 bits (393), Expect = 6e-48
 Identities = 64/102 (62%), Positives = 79/102 (77%)

Query: 5   RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV 64
           RF+    +   + LLR+NPERRLGS E+DAEDVKKQ FFR I W++LL R++KPPFVPT+
Sbjct: 222 RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTI 281

Query: 65  TDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTY 106
               DVSNFDEEFTSE P LTPP++PR LT++EQ LF+ F Y
Sbjct: 282 KGPEDVSNFDEEFTSEAPVLTPPREPRLLTEEEQELFRGFDY 323

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  108 bits (272), Expect = 4e-30
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K  L KNPE+RLG      +D+K   FFR I W++L  + +KPPF P +    DVSNFD+
Sbjct: 228 KSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDD 287

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
           EFT EKP LTPP +   + + +Q  F+ F+Y+
Sbjct: 288 EFTKEKPVLTPPDEAI-IRNIDQEEFRGFSYI 318

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 94.5 bits (235), Expect = 1e-24
 Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K+LL++NP  RLG+   DA +V+   FFRH+ W++LL R+V+PPF P +    DVS FD 
Sbjct: 232 KKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDS 291

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
           +FT + P  +P  D   L++    +F  FTY+A
Sbjct: 292 KFTRQTPVDSP--DDSTLSESANQIFLGFTYVA 322

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 90.6 bits (225), Expect = 4e-23
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K LL K+P +RLG       D+++ AFFR I WE+L  R ++PPF P V       NFD+
Sbjct: 233 KGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRSAENFDK 292

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            FT E P LTPP D   + + +Q+ F+ F+++
Sbjct: 293 FFTREPPVLTPP-DKLVIANIDQSEFQGFSFV 323

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 85.2 bits (211), Expect = 3e-21
 Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA+++ +  FF  I W++++ ++++PPF P VT   D   FDEEF
Sbjct: 229 LLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEF 288

Query: 78  TSEKPELTPPKDPRPLT---DDEQNLFKDFTYMAD 109
           T++   +TPP     L     +E+  F  F+Y A 
Sbjct: 289 TAQSITITPPDRYDSLGLLQLEERPHFPQFSYSAS 323

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 81.8 bits (202), Expect = 7e-20
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
            +L  ++P +RLG       D+++  FFR I WE L  R + PPF P V    D SNFD 
Sbjct: 228 SKLFERDPTKRLGV----DGDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDR 283

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
           EFT+EK  L+ P D + L   +Q  F+ F++ 
Sbjct: 284 EFTNEKVRLS-PVDKKLLASMDQEQFRGFSFT 314

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 81.2 bits (200), Expect = 1e-19
 Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 4/103 (3%)

Query: 6   FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVT 65
           F+G    +   +LLRK+P++RLG+  + A ++K+  FF+ + WE L  R+V PPF P++ 
Sbjct: 233 FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSIR 292

Query: 66  DVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
           +  DV NF EEFT+ +P  +P   P P       +F+ ++++A
Sbjct: 293 NELDVGNFAEEFTNLEPVYSPAGTP-PSGA---RVFQGYSFVA 331

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 79.9 bits (197), Expect = 4e-19
 Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 3/93 (3%)

Query: 16  KELLRKNPERRLG--SSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNF 73
           K  + KNP +RLG  +S+   + +K+  FF+ I W  L  R++KPPF P +    DV+NF
Sbjct: 228 KAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNF 287

Query: 74  DEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTY 106
           D++FT E+P LT P DP  +    Q  F+ F++
Sbjct: 288 DQDFTKEEPVLT-PVDPAVIKQINQEEFRGFSF 319

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 79.3 bits (195), Expect = 6e-19
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K L+ K+P +RLG       D+K+ AFFR+I WE+L  + V+PP+ P      D  NFD+
Sbjct: 233 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKACG-RDAENFDK 291

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            FT   P LTPP D   + + +Q+ F+ F+Y+
Sbjct: 292 FFTRHPPVLTPP-DQEVIMNLDQSEFEGFSYV 322

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 79.1 bits (195), Expect = 6e-19
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + L ++NP  RLG+     E++K+  FF  I W +L  R +KPPF P V    D   FD 
Sbjct: 230 RALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFDP 289

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
           EFTS  P+ +P     P + +   LF+ F+++
Sbjct: 290 EFTSRTPKDSPGI---PPSANAHQLFRGFSFV 318

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 77.6 bits (191), Expect = 2e-18
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 16  KELLRKNPERRLGSSERDAED-VKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  + KNP  RLGS     E+ + +  FF+ + WE+L  R+++PPF P +    DVSNFD
Sbjct: 228 KAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFD 287

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
            +F  E P LT P +   L    Q+ F++F+Y A
Sbjct: 288 PDFIKEDPVLT-PIEESLLPMINQDEFRNFSYTA 320

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 76.2 bits (187), Expect = 8e-18
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           L  + PERRLG       D+++  FFR I W  L  R ++PPF P V    D SNFD+EF
Sbjct: 230 LFVREPERRLGVKG----DIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEF 285

Query: 78  TSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +EKP L+   D   +   +QN+F++F+++
Sbjct: 286 LNEKPRLS-VTDRMLINSMDQNMFENFSFI 314

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 74.5 bits (184), Expect = 2e-17
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +RLG+ +    D+K   +F  I W  LL R+++ PF+P V   GD SNFD+
Sbjct: 230 RNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDD 289

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 74.6 bits (183), Expect = 3e-17
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 12/114 (10%)

Query: 4   KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT 63
           K  + + G +  K LL +NP+ RLG+  RDA ++K+  FF  I W+ L  +++ PPF P 
Sbjct: 218 KNVLSDEGRQFVKGLLNRNPQHRLGAH-RDAVELKEHPFFADIDWDLLSKKQITPPFKPI 276

Query: 64  VTDVGDVSNFDEEFTSEK-------PELTPPKDP----RPLTDDEQNLFKDFTY 106
           V    DVSNFD EFT+         P    P  P     PL+   Q  F+ FT+
Sbjct: 277 VDSDEDVSNFDPEFTNSSLLNAGIVPWEDVPGLPGANSTPLSSSVQENFRGFTF 330

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 74.4 bits (183), Expect = 3e-17
 Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 6/96 (6%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+K+  +RLG+ + D  ++K   FF  I W++L+++++ PPF P V+   D+ +FD 
Sbjct: 228 EGLLQKDRTKRLGAKD-DFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDP 286

Query: 76  EFTSEK--PELTPPKDPRPLT---DDEQNLFKDFTY 106
           EFT E     +    D   ++    +  + F  F+Y
Sbjct: 287 EFTEEPVPNSVGKSPDSVLVSASVKEADDAFLGFSY 322

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 74.2 bits (182), Expect = 4e-17
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 3/89 (3%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL ++P RRLG +   A+++K   FF  + W++LL + ++PPF P V+   D SNFDEEF
Sbjct: 227 LLSRDPTRRLGYN--GAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEF 284

Query: 78  TSEKPELTPPKDPRPLTDDEQNLFKDFTY 106
           T EKP +    D   L++  Q  F  ++Y
Sbjct: 285 TREKP-IDSVVDDSHLSETVQQQFGGWSY 312

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 74.3 bits (182), Expect = 4e-17
 Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K L+ K+P +RLG       D+++ AFFR I W++L +R ++PPF P V   G   NFD+
Sbjct: 233 KGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPKVCGKG-AENFDK 291

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            FT  +P LTPP D   + + +Q  F+ F+Y+
Sbjct: 292 FFTRGQPVLTPP-DQLVIANIDQADFEGFSYV 322

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 72.7 bits (178), Expect = 1e-16
 Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 229 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 288

Query: 78  TSEKPELTPPKDPRPL---TDDEQNLFKDFTYMA 108
           T++   +TPP     L     D++  F  F+Y A
Sbjct: 289 TAQSITITPPDRYDSLGLLELDQRTHFPQFSYSA 322

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|214529 smart00133, S_TK_X, Extension to Ser/Thr-type protein kinases

 Score = 67.8 bits (166), Expect = 1e-16
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 44  RHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKD 103
           R I W++L ++ ++PPFVP +    D SNFD EFT E P LTP  D       +Q  F+ 
Sbjct: 1   RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDPEFTEETPVLTPV-DSPLSGGIQQEPFRG 59

Query: 104 FTYMA 108
           F+Y+ 
Sbjct: 60  FSYVF 64

Length = 64

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 72.5 bits (178), Expect = 2e-16
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D+K   FFR+I W+ L  ++V PP+ P +    D+ NFD
Sbjct: 237 KGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFD 296

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +FT E  +LT P DP  +   +Q+ F+ F Y+
Sbjct: 297 PQFTDEPVQLT-PDDPDVIARIDQSEFEGFEYI 328

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 71.2 bits (174), Expect = 5e-16
 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)

Query: 1   MDDKRFVGEVGLER---WKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVK 57
           M++ RF   +  E       LL+K+P++RLG    DA+++ +  FF  I W+++  +++ 
Sbjct: 210 MEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLV 269

Query: 58  PPFVPTVTDVGDVSNFDEEFTSEKPELTPP--KDPRPLTDDEQNL-FKDFTYMA 108
           PPF P VT   D   FDEEFT++   +TPP   D     D+E+   F  F+Y A
Sbjct: 270 PPFKPQVTSETDTRYFDEEFTAQMITITPPDQDDSMETVDNERRPHFPQFSYSA 323

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 3e-15
 Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 23  PERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP 82
           PE RLGS     E++K   FF+ I WE L     KPPFVP ++   D SNFD +F  +K 
Sbjct: 272 PEDRLGS----FEEIKSHPFFKGIDWENLRET--KPPFVPELSSPLDTSNFD-DFEDDKD 324

Query: 83  ELTPPKDPRPLTDDEQNL-FKDFTY 106
                       +  + L F  FTY
Sbjct: 325 LSDYLSQNSKKLNKGKQLAFVGFTY 349

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 67.5 bits (165), Expect = 9e-15
 Identities = 26/59 (44%), Positives = 40/59 (67%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K+LL  +  RRLG+ +  A+DVK   +F+ + W+++  R++KPP VP V+  GD SNFD
Sbjct: 230 KKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFD 288

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 67.0 bits (163), Expect = 2e-14
 Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D+K   FFR I W+ L  ++V PPF P +TD   + NFD
Sbjct: 235 KGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDDYGLENFD 294

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +FTSE  +LT P D   +   +Q+ F+ F Y+
Sbjct: 295 TQFTSEPVQLT-PDDEDVIKRIDQSEFEGFEYI 326

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 66.3 bits (161), Expect = 4e-14
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL K+P +RLG    DA+++ + +FF  + W+++  +++ PPF P VT   D   FDEEF
Sbjct: 229 LLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEF 288

Query: 78  TSEKPELTPPK----DPRPLTDDEQN-LFKDFTYMA 108
           T++   +TPP+    D     D+E+   F  F+Y A
Sbjct: 289 TAQTITITPPEKYDEDGMDCMDNERRPHFPQFSYSA 324

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 63.5 bits (154), Expect = 3e-13
 Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL K+  RRLG+ + D  ++K   FF  I W++L H+R+ PP+ P V    D+ +FD EF
Sbjct: 230 LLHKDQRRRLGA-KADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFDPEF 288

Query: 78  TSE 80
           T E
Sbjct: 289 TQE 291

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 61.6 bits (149), Expect = 1e-12
 Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           +ELL K+ +RRLG+ E D  ++++  FF  + W +L  +++ PPF P V    D+SNFD 
Sbjct: 228 EELLEKDRQRRLGAKE-DFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDA 286

Query: 76  EFTSE 80
            FT E
Sbjct: 287 VFTEE 291

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 61.0 bits (148), Expect = 3e-12
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 15/111 (13%)

Query: 3   DKRFVGEVGLERW---------KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLH 53
           +K   G +    W         K LL+ +  +RLG+ +    DVK   +F    W++L  
Sbjct: 225 EKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYA 284

Query: 54  RRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
           R    P    V   GD SNF+     + P+ +P     PLT  +Q  F  F
Sbjct: 285 RYYPAPIPVRVKSPGDTSNFE-----KYPD-SPVDRLPPLTAAQQAEFAGF 329

Length = 329

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 60.8 bits (148), Expect = 3e-12
 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 6   FVGEVGL-ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFV 61
           F  EV L    K+L+++     ERRLG+      ++K   FF+ + WE +  R    P +
Sbjct: 260 FPDEVPLSPEAKDLIKRLCCEAERRLGN--NGVNEIKSHPFFKGVDWEHI--RERPAPII 315

Query: 62  PTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTY 106
           P +  + D SNFD+    +    T P  PR     +   F  +TY
Sbjct: 316 PELKSITDTSNFDDFEEIDLDVPTSPGPPRGKIKSKDLAFIGYTY 360

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 60.0 bits (145), Expect = 5e-12
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           ++L  ++P RRLG       +++   FF+ I W  L  R + PPF P V    D SNFD 
Sbjct: 228 EKLFERDPTRRLGVVG----NIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
           EF SEKP L+   D   +   +Q+ F  F+++
Sbjct: 284 EFLSEKPRLS-YSDKNLIDSMDQSAFAGFSFI 314

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 57.4 bits (138), Expect = 5e-11
 Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D++   FFR++ W+ +  ++V PPF P ++    + NFD
Sbjct: 237 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFD 296

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +FT+E  +LTP  D   +   +Q+ F+ F Y+
Sbjct: 297 AQFTNEPVQLTPDDDD-IVRKIDQSEFEGFEYI 328

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 56.9 bits (138), Expect = 7e-11
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
           ++LL K+P +RLGS +R A ++K+  FFR + W   L R   PP +P   D  D
Sbjct: 266 RKLLVKDPSKRLGS-KRGAAEIKQHPFFRGVNWA--LIRHTTPPIIPRPDDGID 316

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 56.2 bits (135), Expect = 1e-10
 Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+  +RLG+ + D  ++K   FF  I W++L+++++ PPF P V+   D+ +FD EF
Sbjct: 230 LLQKDRTKRLGAKD-DFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDPEF 288

Query: 78  TSE 80
           T E
Sbjct: 289 TEE 291

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|215917 pfam00433, Pkinase_C, Protein kinase C terminal domain

 Score = 51.5 bits (124), Expect = 2e-10
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 69  DVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADW 110
           D SNFD EFTSE P+L+PP D   L+  +Q  F+ F+Y+   
Sbjct: 7   DTSNFDPEFTSEPPKLSPP-DSEVLSSIDQLEFRGFSYVNPE 47

Length = 47

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 53.1 bits (127), Expect = 2e-09
 Identities = 20/47 (42%), Positives = 32/47 (68%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           + LL K+P++RLG    DA+++KK  FF+ I W++L  ++V  PF P
Sbjct: 244 QRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAAKKVPAPFKP 290

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 52.5 bits (126), Expect = 2e-09
 Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 2/46 (4%)

Query: 17  ELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           +LL K+P++RLG++   A+++K   FF+ I W++L  +R+  PF P
Sbjct: 245 KLLEKDPKKRLGAN--GADEIKNHPFFQGIDWDDLAAKRIPAPFKP 288

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 51.7 bits (124), Expect = 4e-09
 Identities = 17/45 (37%), Positives = 29/45 (64%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           LL+K+PE+RLG     A++V++   F+ + W  L    ++PPF+P
Sbjct: 232 LLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 51.4 bits (123), Expect = 6e-09
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 16  KELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSN 72
           ++L+R+   N E RLG     A ++K   FFR + W+ +  R+++ PF+P +  + D S 
Sbjct: 280 EDLIRRLITNAENRLGRG--GAHEIKSHPFFRGVDWDTI--RQIRAPFIPQLKSITDTSY 335

Query: 73  FDEEFTSEKPELTPPKDP---RPLTDDEQNL-FKDFTY 106
           F  +   + PE    K     +     E +L F  +TY
Sbjct: 336 FPTDELEQVPEAPALKQAAPAQQEESVELDLAFIGYTY 373

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 49.2 bits (117), Expect = 4e-08
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
           E  K+L+++   + ERRLG  +   ED KK AFF  I WE +  R ++ P++P V+   D
Sbjct: 238 EEAKDLIQRLICSRERRLG--QNGIEDFKKHAFFEGIDWENI--RNLEAPYIPDVSSPSD 293

Query: 70  VSNFD-EEFTSEKPELTPP 87
            SNFD ++     PE+ PP
Sbjct: 294 TSNFDVDDDVLRNPEIAPP 312

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 7/58 (12%)

Query: 23  PERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE 80
           P RR GS     ED+K   FF+ + W EL  R +KPPFVP +    D   FD +F +E
Sbjct: 244 PSRRFGS----LEDIKNHPFFKEVDWNEL--RELKPPFVPELESEIDTGYFD-DFENE 294

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD- 74
           K+LL  +  +R G+ ++ A++VK+  +F +I W  LLH+ V+ P+ P   +V D SNF+ 
Sbjct: 260 KKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFER 319

Query: 75  -EEFTSEKPELTPPKDP 90
            +E  +   ++T   DP
Sbjct: 320 VQEDLTIADKITNENDP 336

Length = 340

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)

Query: 22  NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK 81
             E RLG +   A+++K   FF+ I +  L+ RR K P++P +T   D SNFD     EK
Sbjct: 285 GAEDRLGKNG--ADEIKAHPFFKGIDFASLI-RRQKAPYIPKITHPTDTSNFD-PVDPEK 340

Query: 82  PELTPPKDPRPLTDDEQNL-------FKDFTY 106
                  +  P  + + N        F +FT+
Sbjct: 341 LRSDDSGESSPDRNVKPNNRKRTEHAFYEFTF 372

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           ++LL K+P  RLG     AE+VK   FFR   ++ L    ++PPF P
Sbjct: 237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.1 bits (112), Expect = 2e-07
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
           E  K+L+R+   +PE RLG      +D K   FF  I W+ +  R    P+VP V+   D
Sbjct: 238 EEAKDLIRRLICSPETRLG--RNGLQDFKDHPFFEGIDWDNI--RNSTAPYVPEVSSPTD 293

Query: 70  VSNFD-EEFTSEKPELTPP 87
            SNFD ++      E  PP
Sbjct: 294 TSNFDVDDDDLRNTESLPP 312

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           LLR+NP  RLG+    A +VK+  FF  + W  LL  R K  F+P +    D S FD
Sbjct: 253 LLRQNPLERLGTG--GAFEVKQHRFFLGLDWNGLL--RQKAEFIPQLESEDDTSYFD 305

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 45.7 bits (108), Expect = 6e-07
 Identities = 21/47 (44%), Positives = 31/47 (65%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           K LL K+P++RLG  E  A +VK+  FFR++ ++ L    + PPFVP
Sbjct: 237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 43.7 bits (103), Expect = 4e-06
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
             + +L++      + RLG      E +    FF  I W  +  R   PPFVPT+    D
Sbjct: 238 SDFLDLIQSLLCGQKERLGY-----EGLCCHPFFSKIDWNNI--RNSLPPFVPTLKSDDD 290

Query: 70  VSNFDE 75
            SNFDE
Sbjct: 291 TSNFDE 296

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 43.1 bits (101), Expect = 5e-06
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
           E  K+L+R+   + E RLG  +   ED K+  FF  I W+ +  R  + P++P V+   D
Sbjct: 238 EDAKDLIRRLICSREHRLG--QNGIEDFKQHPFFTGIDWDNI--RNCEAPYIPEVSSPTD 293

Query: 70  VSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
            SNFD +    K   T P             F  FTY +
Sbjct: 294 TSNFDVDDDCLKNSETMPPPSHTAFSGHHLPFVGFTYTS 332

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 42.7 bits (100), Expect = 7e-06
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           + LL KNP+ RLG     A  VK+   F++I ++ L    ++PPF P
Sbjct: 237 RMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 42.2 bits (99), Expect = 9e-06
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
            L K PE RLGS E++ +D +K  FF+ I +  L    + PPFVP
Sbjct: 233 FLAKKPEDRLGSREKN-DDPRKHEFFKTINFPRLEAGLIPPPFVP 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 42.2 bits (99), Expect = 1e-05
 Identities = 17/47 (36%), Positives = 30/47 (63%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           + LL+++  RRLG   R A++VK+  FFR + W+ +  ++  PP +P
Sbjct: 231 EGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 41.0 bits (96), Expect = 3e-05
 Identities = 17/45 (37%), Positives = 27/45 (60%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           LL K+PE+RLG  + + + ++    FR + W +L    + PPFVP
Sbjct: 235 LLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 40.5 bits (95), Expect = 5e-05
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 24  ERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPE 83
           E RLG +    +++K   FF++ QW     R    P VP ++   D SNFD+    +K E
Sbjct: 290 EVRLGRN--GVDEIKSHPFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFDDIEDDDKNE 347

Query: 84  LTPPKDPRPLTDDEQNL-FKDFTY 106
            T P    P       L F  FTY
Sbjct: 348 ETFPL---PKAFAGNQLPFIGFTY 368

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 40.4 bits (94), Expect = 5e-05
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           K LL K+P+ RLG     A +VK+   F+ I ++ L    ++PPF P
Sbjct: 237 KMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKP 283

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 39.6 bits (92), Expect = 8e-05
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 15/79 (18%)

Query: 19  LRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFT 78
           L + PE RLG +   A+++K   FF+ I +   L R+   P++P +T   D SNFD    
Sbjct: 286 LCRGPEDRLGKN--GADEIKAHPFFKTIDFSSDL-RQQSAPYIPKITHPTDTSNFD---- 338

Query: 79  SEKPELTPPKDPRPLTDDE 97
                   P DP  L  D+
Sbjct: 339 --------PVDPDKLWSDD 349

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE 50
           K+LLR+NPE RLG+ +   +D+KK  +F    WE 
Sbjct: 228 KQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWEG 262

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 16/45 (35%), Positives = 30/45 (66%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           LL+++  +RLG   R A++VK+  FF+ I W+++  ++  PP +P
Sbjct: 233 LLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPLIP 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 24  ERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT-VTDVGDVSNFDEEFTSE-- 80
           E R+G+     E++K   FF  + WE   H R +P  +P  +  + D SNFDE   S+  
Sbjct: 279 EHRIGAP--GVEEIKTNPFFEGVDWE---HIRERPAAIPIEIKSIDDTSNFDEFPDSDIL 333

Query: 81  KPELTPPKDPRPLTDDEQNLFKDFTY 106
           KP +     P     ++  +F ++TY
Sbjct: 334 KPTVATSNHPETDYKNKDWVFINYTY 359

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 36.4 bits (84), Expect = 0.001
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)

Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           LL  +P +R G      +++K+   F  + WE L ++    PF+P   D  D S F+
Sbjct: 617 LLTMDPTKRAG-----LKELKQHPLFHGVDWENLQNQ--TMPFIPQPDDETDTSYFE 666

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT-VTDVG 68
           E+ K+L+ +   + E R+GS+    E++K   FF  + W    H R +P  +P  +  + 
Sbjct: 265 EKAKDLILRFCTDSENRIGSN--GVEEIKSHPFFEGVDWG---HIRERPAAIPIEIKSID 319

Query: 69  DVSNFDE 75
           D SNFDE
Sbjct: 320 DTSNFDE 326

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	111
KOG0694|consensus	694		99.96
KOG0690|consensus	516		99.93
KOG0696|consensus	683		99.92
KOG0598|consensus	357		99.9
KOG0695|consensus	593		99.89
KOG0605|consensus	550		99.85
KOG0612|consensus	1317		99.82
KOG0616|consensus	355		99.82
KOG0986|consensus	591		99.73
KOG0614|consensus	732		99.69
KOG0610|consensus	459		99.66
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.65
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.65
KOG0603|consensus	612		99.64
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.62
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.62
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.62
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.6
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.6
KOG0608|consensus	1034		99.59
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.58
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.58
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.57
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.56
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.54
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.53
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.53
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.5
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.46
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.46
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.45
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.44
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.44
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.43
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.42
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.39
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.39
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.36
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.34
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.33
KOG0592|consensus	604		99.33
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.3
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.26
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.26
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.26
smart00133	64	S_TK_X Extension to Ser/Thr-type protein kinases.	99.25
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.22
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.21
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.16
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.16
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.15
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.11
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.11
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.1
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.07
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.03
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.02
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.96
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.92
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.88
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.86
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.85
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.83
KOG0606|consensus	1205		98.82
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.8
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.78
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.72
PF00433	48	Pkinase_C: Protein kinase C terminal domain; Inter	98.69
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.62
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.57
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.46
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.39
KOG0588|consensus	786		98.36
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.31
KOG0575|consensus	592		98.29
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.27
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.26
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.23
KOG0033|consensus	355		98.2
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.17
KOG0615|consensus	475		98.17
KOG0606|consensus	1205		98.16
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.14
KOG0604|consensus	400		98.11
PTZ00036	440	glycogen synthase kinase; Provisional	98.07
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.02
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.01
KOG4717|consensus	864		97.98
KOG0583|consensus	370		97.97
KOG0585|consensus	576		97.96
KOG0603|consensus	612		97.95
KOG0580|consensus	281		97.94
KOG0599|consensus	411		97.94
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	97.91
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	97.88
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	97.87
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	97.85
PHA03209	357	serine/threonine kinase US3; Provisional	97.83
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	97.81
KOG0660|consensus	359		97.81
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	97.79
KOG0581|consensus	364		97.76
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	97.75
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	97.74
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	97.7
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	97.7
PHA03207	392	serine/threonine kinase US3; Provisional	97.7
PTZ00284	467	protein kinase; Provisional	97.7
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	97.68
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	97.67
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	97.65
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	97.65
KOG0607|consensus	463		97.63
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.61
KOG0032|consensus	382		97.61
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	97.61
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	97.59
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	97.58
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	97.57
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	97.56
PHA03210	501	serine/threonine kinase US3; Provisional	97.56
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	97.55
KOG0198|consensus	313		97.55
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	97.53
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	97.52
PLN00034	353	mitogen-activated protein kinase kinase; Provision	97.51
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	97.51
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	97.49
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	97.48
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	97.48
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	97.48
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	97.46
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	97.46
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	97.43
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	97.43
PHA03211	461	serine/threonine kinase US3; Provisional	97.42
PHA03212	391	serine/threonine kinase US3; Provisional	97.42
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	97.42
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	97.4
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	97.4
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	97.39
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	97.39
PLN00009	294	cyclin-dependent kinase A; Provisional	97.39
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	97.38
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	97.38
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	97.37
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	97.36
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	97.36
KOG0593|consensus	396		97.36
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	97.36
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	97.36
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	97.34
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	97.32
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	97.32
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	97.31
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	97.3
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	97.3
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	97.29
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	97.29
KOG0578|consensus	550		97.29
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	97.28
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	97.28
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	97.26
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	97.26
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	97.26
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	97.26
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	97.25
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	97.25
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	97.25
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	97.24
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	97.23
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	97.23
KOG0661|consensus	538		97.22
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	97.22
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	97.21
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	97.21
PTZ00024	335	cyclin-dependent protein kinase; Provisional	97.21
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	97.19
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	97.19
KOG0579|consensus	1187		97.19
KOG0663|consensus	419		97.18
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	97.17
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	97.17
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	97.16
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	97.15
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.14
KOG0597|consensus	808		97.13
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	97.13
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	97.13
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	97.12
KOG0671|consensus	415		97.12
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	97.11
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	97.11
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	97.09
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	97.07
KOG0668|consensus	338		97.07
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	97.06
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	97.06
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	97.04
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	97.04
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	97.04
KOG0659|consensus	318		97.03
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	97.03
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	97.03
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	97.01
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	97.01
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	97.01
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	97.01
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	97.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	96.96
KOG1167|consensus	418		96.96
KOG0665|consensus	369		96.95
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	96.88
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	96.88
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	96.86
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	96.85
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	96.84
KOG0666|consensus	438		96.83
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	96.82
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	96.82
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	96.77
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	96.7
KOG0669|consensus	376		96.7
KOG0658|consensus	364		96.69
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	96.68
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	96.67
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	96.66
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	96.63
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	96.61
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	96.59
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	96.58
KOG1027|consensus	903		96.57
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	96.56
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	96.55
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	96.54
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	96.51
KOG0596|consensus	677		96.5
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	96.5
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	96.44
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	96.43
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	96.4
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	96.39
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	96.39
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	96.35
KOG0594|consensus	323		96.35
KOG0662|consensus	292		96.33
KOG0586|consensus	596		96.33
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	96.31
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	96.3
PTZ00283	496	serine/threonine protein kinase; Provisional	96.18
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	96.17
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	96.15
KOG0667|consensus	586		96.03
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	96.03
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	96.0
KOG0582|consensus	516		95.95
KOG0670|consensus	752		95.94
KOG4236|consensus	888		95.93
KOG0600|consensus	560		95.92
PTZ00267	478	NIMA-related protein kinase; Provisional	95.8
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	95.75
KOG0201|consensus	467		95.55
KOG0574|consensus	502		95.11
KOG1290|consensus	590		94.86
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	94.76
KOG4645|consensus	1509		94.75
KOG0590|consensus	601		94.47
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	94.39
KOG0983|consensus	391		94.37
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	94.25
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	94.05
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	93.98
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	93.76
PTZ00266	1021	NIMA-related protein kinase; Provisional	93.64
PHA02988	283	hypothetical protein; Provisional	93.27
PLN00181	793	protein SPA1-RELATED; Provisional	93.17
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	92.99
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	92.95
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	92.92
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	92.91
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	92.63
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	92.2
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	92.19
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	92.14
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	92.02
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	91.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	91.93
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	91.89
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	91.87
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	91.83
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	91.75
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	91.64
KOG1151|consensus	775		91.57
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	91.46
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	91.25
KOG2345|consensus	302		91.25
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	91.22
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	91.2
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	91.19
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	90.97
KOG4279|consensus	1226		90.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	90.79
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	90.64
KOG0584|consensus	632		90.47
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	90.41
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	90.38
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	90.23
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	90.2
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	90.18
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	90.12
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	90.1
KOG0611|consensus	668		90.01
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	89.86
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	89.72
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	89.67
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	89.6
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	89.48
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	89.45
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	89.23
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	89.08
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	89.02
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	88.92
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	88.74
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	88.69
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	88.65
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	88.64
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	88.57
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	88.41
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	88.22
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	88.18
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	88.1
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	87.99
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	87.99
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	87.95
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	87.94
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	87.88
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	87.65
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	87.58
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	87.51
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	87.37
KOG0589|consensus	426		87.32
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	87.28
KOG1989|consensus	738		87.22
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	87.2
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	87.19
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	86.87
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	86.83
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	86.82
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	86.66
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	86.59
KOG1035|consensus	1351		86.39
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	85.89
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	85.84
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	85.68
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	85.13
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	84.98
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	84.78
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	84.64
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	84.42
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	84.14
KOG4158|consensus	598		82.71
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	82.29
KOG0577|consensus	948		81.09
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	80.65
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	80.59

>KOG0694|consensus

Probab=99.96  E-value=1e-29  Score=194.61  Aligned_cols=109  Identities=62%  Similarity=1.158  Sum_probs=104.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .||.++|.+|.+++++||.++|++|||++.+|+.+|+.||||+.|||+.|++|+++|||+|.+++..|.+|||.+|+.+.
T Consensus       586 ~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~eFt~e~  665 (694)
T KOG0694|consen  586 RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVSNFDEEFTSEK  665 (694)
T ss_pred             CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhcccchhhhcCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceeccCCC
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMADWC  111 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~~  111 (111)
                      +.+++ ..+..++..+|..|.||+|+++++
T Consensus       666 p~Lt~-~~~~~l~~~~q~~F~~Fs~~~~~~  694 (694)
T KOG0694|consen  666 PALTP-SDPRPLTEEEQEAFRDFSFVAEWC  694 (694)
T ss_pred             CccCC-CCccccchhhHHHhcCccccCCCC
Confidence            99998 566777889999999999999875

>KOG0690|consensus

Probab=99.93  E-value=2.3e-26  Score=166.04  Aligned_cols=109  Identities=33%  Similarity=0.639  Sum_probs=99.6

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      |+||+.+|++|+.|+.+||.++|++|||.++.++.+|+.|+||++|||+++..+++.|||.|++.++.|+++||.+|+.+
T Consensus       385 ~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~EFT~q  464 (516)
T KOG0690|consen  385 LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSETDTRYFDEEFTSQ  464 (516)
T ss_pred             ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccccchhhhhhhhhcc
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCC---hhhcCCCCCceeccC
Q psy3349          81 KPELTPPKDPRPLT---DDEQNLFKDFTYMAD  109 (111)
Q Consensus        81 ~~~~~~~~~~~~~~---~~~~~~F~~Fsy~~~  109 (111)
                      .+..+|++......   ...+..|..|||.+.
T Consensus       465 ~v~lTPP~r~~~~~~~~~e~~~~FpQFsy~~~  496 (516)
T KOG0690|consen  465 PVTLTPPDRYGSTVDEDEERRPHFPQFSYSAS  496 (516)
T ss_pred             eeEecCCCCCCcccchhhhhccCCcceeeecc
Confidence            99999886554442   235788999999864

>KOG0696|consensus

Probab=99.92  E-value=9.1e-26  Score=166.85  Aligned_cols=110  Identities=32%  Similarity=0.619  Sum_probs=100.4

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      +.||..+|.+|++++++||.+.|.+||||+..|-.+|+.||||+.|||+.+++++++|||.|.++...+++|||..|+.+
T Consensus       567 vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~~Ft~~  646 (683)
T KOG0696|consen  567 VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAENFDKFFTRE  646 (683)
T ss_pred             CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccccCCchhhhhHHHhcC
Confidence            46999999999999999999999999999998999999999999999999999999999999999989999999999999


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceeccCCC
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMADWC  111 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~~  111 (111)
                      .+..+|++. ..+...+|..|.||||++|-+
T Consensus       647 ~~~lTPpD~-~v~~nldq~eF~gFsfvNpef  676 (683)
T KOG0696|consen  647 PTDLTPPDK-LVMMNLDQSEFEGFSFVNPEF  676 (683)
T ss_pred             CCCCCCchH-HHHhcCchhhcCceeeeChhh
Confidence            999998643 333446899999999999853

>KOG0598|consensus

Probab=99.90  E-value=1.4e-23  Score=151.86  Aligned_cols=107  Identities=38%  Similarity=0.761  Sum_probs=92.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      .|..+|.+|+|||++||+++|++|+| +.+|+.+|++||||.+|||+.+.++++.|||.|.+....++++||.+|+...+
T Consensus       245 ~p~~ls~~ardll~~LL~rdp~~RLg-~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~~~~~~Fd~eft~~~~  323 (357)
T KOG0598|consen  245 PPGYLSEEARDLLKKLLKRDPRQRLG-GPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGLEDTSNFDNEFTSYTV  323 (357)
T ss_pred             CCccCCHHHHHHHHHHhccCHHHhcC-CCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCccccccccHHHHhccc
Confidence            45569999999999999999999999 56789999999999999999999999999999999999999999999999977


Q ss_pred             CCCCCCC-C-----CCCChhhcCCCCCceeccCC
Q psy3349          83 ELTPPKD-P-----RPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        83 ~~~~~~~-~-----~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      ..++... +     ...+......|.||||++++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~f~gft~~~~s  357 (357)
T KOG0598|consen  324 DYSPVDSSPDMSAFTAFSRTYNKIFPGFTYVASS  357 (357)
T ss_pred             cCCccccCcccccccccccccccccCCccccCCC
Confidence            6665431 2     22344567889999999875

>KOG0695|consensus

Probab=99.89  E-value=8.9e-24  Score=153.43  Aligned_cols=109  Identities=36%  Similarity=0.617  Sum_probs=100.7

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCC-ChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSER-DAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTS   79 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~-g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~   79 (111)
                      |.+|+.+|-.|..+++++|.+||++||||... |+.+|+.|+||+.|||+.++++.+.|||.|.+.+..+..|||..|++
T Consensus       476 iriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l~~fd~qft~  555 (593)
T KOG0695|consen  476 IRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGLDNFDTQFTS  555 (593)
T ss_pred             ccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccccCcccccccccc
Confidence            46899999999999999999999999999876 99999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          80 EKPELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      +.+.++|. ++..+...+|..|.||.|++|-
T Consensus       556 e~~qltpd-d~d~i~ridqsefegfeyinpl  585 (593)
T KOG0695|consen  556 EPVQLTPD-DEDAIKRIDQSEFEGFEYINPL  585 (593)
T ss_pred             CCcccCCC-CHHHHHhcchhhcCcceecchh
Confidence            99999985 4455566789999999999973

>KOG0605|consensus

Probab=99.85  E-value=2.2e-21  Score=145.92  Aligned_cols=102  Identities=31%  Similarity=0.581  Sum_probs=78.7

Q ss_pred             CCCCCC--CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCcccc
Q psy3349           1 MDDKRF--VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFT   78 (111)
Q Consensus         1 ~~~p~~--~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~   78 (111)
                      +.+|..  +|.+|+|||.+||+ ||.+|||+  +|++||+.||||++|+|+.|  +...|||+|.+.+..|+.|||. |.
T Consensus       407 l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~--~G~~EIK~HPfF~~v~W~~l--~~~~apfvP~v~~~~DT~yFdd-F~  480 (550)
T KOG0605|consen  407 LKFPEEVDLSDEAKDLITRLLC-DPENRLGS--KGAEEIKKHPFFKGVDWDHL--REMPAPFVPQVNSELDTQYFDD-FP  480 (550)
T ss_pred             ccCCCcCcccHHHHHHHHHHhc-CHHHhcCc--ccHHHHhcCCccccCCcchh--hcCCCCCCCCCCCccccccccc-Cc
Confidence            356754  88999999999999 99999995  79999999999999999999  5677999999999999999994 65


Q ss_pred             CCCCCCCCCCCC---CCCCh-------hhcCCCCCceecc
Q psy3349          79 SEKPELTPPKDP---RPLTD-------DEQNLFKDFTYMA  108 (111)
Q Consensus        79 ~~~~~~~~~~~~---~~~~~-------~~~~~F~~Fsy~~  108 (111)
                      .+..........   .....       ..+..|.||||.+
T Consensus       481 e~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~FvgfTyk~  520 (550)
T KOG0605|consen  481 EEDSMTPTADKSGPSRKMLSMVDTNNSSKDINFVGFTYKN  520 (550)
T ss_pred             ccccCcccccccccchhhhhcccccCCcccccccceeeec
Confidence            543322211111   11111       2355699999976

>KOG0612|consensus

Probab=99.82  E-value=2.5e-20  Score=149.42  Aligned_cols=103  Identities=31%  Similarity=0.453  Sum_probs=81.9

Q ss_pred             CCCC--CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCcccc
Q psy3349           1 MDDK--RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFT   78 (111)
Q Consensus         1 ~~~p--~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~   78 (111)
                      +.||  ..+|.+|+|||++||+ +|..|||.  ||+++|+.||||.|++|+.+  |...||++|.+.++.||+|||..-.
T Consensus       300 l~FP~~~~VSeeakdLI~~ll~-~~e~RLgr--ngiedik~HpFF~g~~W~~i--R~~~pP~vPevssd~DTsnFd~~~d  374 (1317)
T KOG0612|consen  300 LSFPDETDVSEEAKDLIEALLC-DREVRLGR--NGIEDIKNHPFFEGIDWDNI--RESVPPVVPEVSSDDDTSNFDVDED  374 (1317)
T ss_pred             cCCCcccccCHHHHHHHHHHhc-Chhhhccc--ccHHHHHhCccccCCChhhh--hhcCCCCCCcCCCCCcccccccccc
Confidence            4688  4599999999999998 89999995  89999999999999999998  7888999999999999999975444


Q ss_pred             CCCCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          79 SEKPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ......+.+......-.+.+-.|.||||+.
T Consensus       375 d~~~~e~~p~~~~~~f~Gn~LPFIGfTy~~  404 (1317)
T KOG0612|consen  375 DLRDAETFPPRIPKAFSGNHLPFIGFTYTH  404 (1317)
T ss_pred             ccchhhccCCCCCCCCcCCcCCeeeeeecc
Confidence            433333222111122236788999999985

>KOG0616|consensus

Probab=99.82  E-value=9.9e-21  Score=134.78  Aligned_cols=80  Identities=29%  Similarity=0.642  Sum_probs=74.0

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccc-ccCCCCCCCCCCccccC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP-TVTDVGDVSNFDEEFTS   79 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p-~~~~~~d~~~f~~~~~~   79 (111)
                      ++||+.+|.+++|||++||++|-++|+|+.++|..+|+.||||++++|+++.+++++||++| .+....|+++|+..-+.
T Consensus       258 v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~e~  337 (355)
T KOG0616|consen  258 VKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIHGPGDTSNFDDYEEE  337 (355)
T ss_pred             ccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCccccCCcccccccccccc
Confidence            57999999999999999999999999999999999999999999999999999999999998 67788999999975444


Q ss_pred             C
Q psy3349          80 E   80 (111)
Q Consensus        80 ~   80 (111)
                      .
T Consensus       338 ~  338 (355)
T KOG0616|consen  338 D  338 (355)
T ss_pred             c
Confidence            3

>KOG0986|consensus

Probab=99.73  E-value=2.5e-18  Score=128.31  Aligned_cols=73  Identities=33%  Similarity=0.634  Sum_probs=67.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccC-----CCCCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVT-----DVGDVSNFD   74 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~-----~~~d~~~f~   74 (111)
                      +||..+|++|++|++.||++||.+||||...|+.++++||||+++||..|+...+.|||+|...     +..|+.+|+
T Consensus       408 ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aVyakDv~DIeqFs  485 (591)
T KOG0986|consen  408 EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAKDVLDIEQFS  485 (591)
T ss_pred             hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCccccchhhhhhhhhcc
Confidence            5888999999999999999999999999989999999999999999999999999999999763     456777777

>KOG0614|consensus

Probab=99.69  E-value=1.4e-17  Score=125.79  Aligned_cols=75  Identities=36%  Similarity=0.665  Sum_probs=72.8

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCc
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE   75 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~   75 (111)
                      +.||+.+++.|.+||++|++.+|.+|||...+|+.||++|.||.++||+.+..+.++||++|.++++.|++|||.
T Consensus       638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~  712 (732)
T KOG0614|consen  638 IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDN  712 (732)
T ss_pred             hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccC
Confidence            468999999999999999999999999999999999999999999999999999999999999999999999996

>KOG0610|consensus

Probab=99.66  E-value=2.1e-16  Score=116.61  Aligned_cols=63  Identities=32%  Similarity=0.608  Sum_probs=54.8

Q ss_pred             CCCC--CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCC
Q psy3349           2 DDKR--FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDV   67 (111)
Q Consensus         2 ~~p~--~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~   67 (111)
                      +||.  .+|..|+|||++||.+||.+|||+. .|+.|||+||||+||+|.-+  +...||++|.....
T Consensus       353 ~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~-rGA~eIK~HpFF~gVnWaLi--r~~~PP~iP~~~d~  417 (459)
T KOG0610|consen  353 KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSK-RGAAEIKRHPFFEGVNWALI--RCARPPEIPKPVDG  417 (459)
T ss_pred             cCCCCCcchhHHHHHHHHHhccChhhhhccc-cchHHhhcCccccCCChhhe--eccCCCcCCCcccc
Confidence            4564  4899999999999999999999984 68999999999999999944  78899999986443

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.65  E-value=6e-16  Score=111.45  Aligned_cols=106  Identities=60%  Similarity=1.068  Sum_probs=94.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++.+||++||+++|.+|+++....+.++++|+||++++|..+..+.+.||+.|.+....|.++|+.++....
T Consensus       219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  298 (324)
T cd05589         219 RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDEEFTSEA  298 (324)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcchhhhcCccccccc
Confidence            36778999999999999999999999876667899999999999999999989999999999988889999999888888


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceec
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYM  107 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~  107 (111)
                      +..++......++...|..|.+|+|+
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (324)
T cd05589         299 PVLTPPREPRLLTEEEQELFRGFDYV  324 (324)
T ss_pred             cccCCCccccccchhhhcccCCcccC
Confidence            87777665556777899999999985

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.65  E-value=7.2e-16  Score=110.91  Aligned_cols=105  Identities=41%  Similarity=0.778  Sum_probs=91.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||..+|.+|+++......+++.||||+.++|..+..+.+.||+.|.+....+.++|+..+....
T Consensus       214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (318)
T cd05570         214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEK  293 (318)
T ss_pred             CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCchhccCc
Confidence            35777999999999999999999999975556699999999999999999999999999999998889999999888888


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceec
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYM  107 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~  107 (111)
                      +..++.... .+....|+.|+||+|+
T Consensus       294 ~~~~~~~~~-~~~~~~~~~~~~~~~~  318 (318)
T cd05570         294 PVLTPPDEA-IIRNIDQEEFRGFSYI  318 (318)
T ss_pred             ccCCCCccc-ccccccccccCCCCCC
Confidence            777765433 3555678999999995

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0603|consensus

Probab=99.64  E-value=1.8e-16  Score=121.48  Aligned_cols=106  Identities=30%  Similarity=0.597  Sum_probs=94.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++..|++++..|+.++|.+|+|.+..|+.+|++|+||..|+|..+..++..|||.|.+..+.++.+||.+|+...
T Consensus       205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~~~  284 (612)
T KOG0603|consen  205 EMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTSQV  284 (612)
T ss_pred             CCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhccCC
Confidence            47888999999999999999999999998889999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      +..+|...+   ...+...|.||+|++++
T Consensus       285 P~dsp~~~~---~~s~~~if~g~sfva~~  310 (612)
T KOG0603|consen  285 PADSPLLSA---SGSDHTIFSGPSFVAPG  310 (612)
T ss_pred             cccCCCCCC---CccccchhcCCCccChH
Confidence            887664321   22345799999999875

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.62  E-value=2.3e-15  Score=108.48  Aligned_cols=107  Identities=34%  Similarity=0.650  Sum_probs=88.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||++||.+|++.....+.++++|+||.+++|..+..+.+.||+.|.+....++.+|+.+++...
T Consensus       213 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T cd05571         213 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQS  292 (323)
T ss_pred             CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCC
Confidence            46788999999999999999999999765456899999999999999999999999999999988889999998888876


Q ss_pred             CCCCCCCCCCCC---ChhhcCCCCCceecc
Q psy3349          82 PELTPPKDPRPL---TDDEQNLFKDFTYMA  108 (111)
Q Consensus        82 ~~~~~~~~~~~~---~~~~~~~F~~Fsy~~  108 (111)
                      ...+++......   ....+..|.+|+|.+
T Consensus       293 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  322 (323)
T cd05571         293 ITITPPDRYDSLGLLQLEERPHFPQFSYSA  322 (323)
T ss_pred             cccCCCCcccccccccccccccCCCCeeeC
Confidence            666654332222   123467899999986

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.62  E-value=2.2e-15  Score=108.88  Aligned_cols=106  Identities=37%  Similarity=0.652  Sum_probs=88.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..++.++++||++||.++|.+|+++.. .++.+|+.|+||.+++|+.+..+.+.+|+.|.+....+.++|+..+..+
T Consensus       221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (327)
T cd05617         221 RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDDYGLENFDTQFTSE  300 (327)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCCCcchhhcCCccccC
Confidence            467789999999999999999999998643 3689999999999999999999999999999998888889999877776


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ....++ ++...+...++..|.||.|.+
T Consensus       301 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~  327 (327)
T cd05617         301 PVQLTP-DDEDVIKRIDQSEFEGFEYIN  327 (327)
T ss_pred             cccCCC-CCccccccccccccCCCcCCC
Confidence            555554 344444556788999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.62  E-value=2.6e-15  Score=108.20  Aligned_cols=106  Identities=35%  Similarity=0.667  Sum_probs=87.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..++.++++||++||++||.+|+++.. .|.++++.||||.+++|+.+..+.+.||+.|.+.+..+.++|+.++..+
T Consensus       214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (320)
T cd05590         214 VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKE  293 (320)
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccC
Confidence            467789999999999999999999999743 3668999999999999999999999999999999888999999888877


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      .+..++.... ......++.|++|+|.+
T Consensus       294 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~  320 (320)
T cd05590         294 DPVLTPIEES-LLPMINQDEFRNFSYTA  320 (320)
T ss_pred             CccCCCCccc-ccccccccCcCCCcccC
Confidence            6665543222 12334578999999964

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.60  E-value=4.4e-15  Score=106.92  Aligned_cols=102  Identities=36%  Similarity=0.733  Sum_probs=87.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      +|..++.++++||.+||+++|.+|++.    ..+++.||||..++|..+..+...+|+.|.+++..+.++|+.++.....
T Consensus       215 ~~~~~~~~~~~li~~~l~~~P~~R~~~----~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (316)
T cd05619         215 YPRWLTREAKDILVKLFVREPERRLGV----KGDIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKP  290 (316)
T ss_pred             CCccCCHHHHHHHHHHhccCHhhcCCC----hHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCccchhhcChhhhcCCc
Confidence            567799999999999999999999986    3599999999999999999899999999999999999999999887766


Q ss_pred             CCCCCCCCCCCChhhcCCCCCceeccC
Q psy3349          83 ELTPPKDPRPLTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~F~~Fsy~~~  109 (111)
                      .... .....+...++++|+||+|.+|
T Consensus       291 ~~~~-~~~~~~~~~~~~~~~~~~~~~~  316 (316)
T cd05619         291 RLSV-TDRMLINSMDQNMFENFSFINP  316 (316)
T ss_pred             ccCC-CcccccccccccccCCCcccCc
Confidence            6543 2333445678899999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.60  E-value=5.2e-15  Score=106.54  Aligned_cols=105  Identities=35%  Similarity=0.668  Sum_probs=84.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||+++|.+|+++...+..+|+.|+||+.++|..+..+.++||+.|... ..+..+++..+....
T Consensus       219 ~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  297 (323)
T cd05616         219 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKAC-GRDAENFDKFFTRHP  297 (323)
T ss_pred             CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCC-CchhhhcCchhccCC
Confidence            4678899999999999999999999998666789999999999999999999999999999864 367788887666554


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      +..++. ....+...++..|.||+|++
T Consensus       298 ~~~~~~-~~~~~~~~~~~~~~~~~~~~  323 (323)
T cd05616         298 PVLTPP-DQEVIMNLDQSEFEGFSYVN  323 (323)
T ss_pred             ccCCCC-CccccccccccccCCCcccC
Confidence            554443 23333444567999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0608|consensus

Probab=99.59  E-value=3e-15  Score=115.91  Aligned_cols=98  Identities=29%  Similarity=0.505  Sum_probs=73.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPEL   84 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~   84 (111)
                      ..+|++|.+||.+|++ ++..|||.  +|+++|+.||||++|||..|  |+..+||+|.+....||+|||..-. +....
T Consensus       896 ~~ls~e~~~li~kLc~-sad~RLGk--ng~d~vKaHpfFkgIDfssl--Rkq~ApYIP~ItHptDTSNFdpvdp-eklwn  969 (1034)
T KOG0608|consen  896 GNLSKEALDLIQKLCC-SADSRLGK--NGADQVKAHPFFKGIDFSSL--RKQRAPYIPRITHPTDTSNFDPVDP-EKLWN  969 (1034)
T ss_pred             cccCHHHHHHHHHHhc-Chhhhhcc--cchhhhhcCccccccchHhh--hhccCCcCccccCCCccccCCcCCc-ccccc
Confidence            3599999999999998 89999995  78999999999999999997  6777899999999999999997432 22221


Q ss_pred             CCCCCC---CCCChhhcCCCCCceecc
Q psy3349          85 TPPKDP---RPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        85 ~~~~~~---~~~~~~~~~~F~~Fsy~~  108 (111)
                      .-.+..   ...+....-.|..|||..
T Consensus       970 ddses~~~~~~~nkhpehaFyEFTfRr  996 (1034)
T KOG0608|consen  970 DDSESPNVRDTLNKHPEHAFYEFTFRR  996 (1034)
T ss_pred             ccccCCCcccccccCCccceeEeeeeh
Confidence            111110   111112235788898864

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.58  E-value=9.1e-15  Score=105.32  Aligned_cols=106  Identities=36%  Similarity=0.689  Sum_probs=87.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||.++|.+|+++......++++||||+.++|..+..+.+.+|+.|.+....+..+|+..+....
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (324)
T cd05587         219 SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFFTREP  298 (324)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCCcchhhhcCcccccCc
Confidence            46778999999999999999999999976556789999999999999999999999999999888788899998776665


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ...++. ....+....+..|.+|||++
T Consensus       299 ~~~~~~-~~~~~~~~~~~~~~~~~~~~  324 (324)
T cd05587         299 PVLTPP-DKLVIANIDQSEFQGFSFVN  324 (324)
T ss_pred             cccCCC-CccccccccccccCCCcccC
Confidence            555543 33334445678999999985

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.58  E-value=9.5e-15  Score=105.60  Aligned_cols=106  Identities=34%  Similarity=0.634  Sum_probs=87.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..++.++++||++||+.+|.+|+++.. .++.++++||||..++|..+..+...||+.|.+....+..+|+..+..+
T Consensus       223 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (329)
T cd05588         223 RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFDPQFTDE  302 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCccccCCCcchhhhcCCccccC
Confidence            467789999999999999999999998643 2579999999999999999998888899999988777888999888777


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ....+|. ........++..|.||.|.+
T Consensus       303 ~~~~~p~-~~~~~~~~~~~~~~~~~~~~  329 (329)
T cd05588         303 PVQLTPD-DPDVIARIDQSEFEGFEYIN  329 (329)
T ss_pred             ccccCCC-CccccccccccccCCCcccC
Confidence            6665543 33344556788999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.57  E-value=1.2e-14  Score=104.54  Aligned_cols=106  Identities=34%  Similarity=0.695  Sum_probs=87.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCC--ChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSER--DAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTS   79 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~--g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~   79 (111)
                      .+|..++.++++||++||.++|.+|+++...  .+.++++||||.+++|..+..+...+|+.|......+..+|+..++.
T Consensus       214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (321)
T cd05591         214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTK  293 (321)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCCCCcchhhhcCCcccc
Confidence            3577799999999999999999999976432  57999999999999999999999999999988877788889988887


Q ss_pred             CCCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          80 EKPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ..+..++. .+.......+..|.||+|.+
T Consensus       294 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  321 (321)
T cd05591         294 EEPVLTPV-DPAVIKQINQEEFRGFSFFN  321 (321)
T ss_pred             CccccCCC-CccccccccccccCCCcccC
Confidence            76666553 33344456788899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.56  E-value=2.2e-14  Score=103.49  Aligned_cols=105  Identities=33%  Similarity=0.681  Sum_probs=83.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||+++|.+|+++...+..++++|+||.+++|..+..+.+.+|+.|.... ....+|+..++...
T Consensus       219 ~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  297 (323)
T cd05615         219 SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPKVCG-KGAENFDKFFTRGQ  297 (323)
T ss_pred             CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCccCC-CchhhcCccccccC
Confidence            46788999999999999999999999976667899999999999999999999999999997544 35788888776654


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      +...++.. ..+...+...|.||+|++
T Consensus       298 ~~~~~~~~-~~~~~~~~~~~~~~~~~~  323 (323)
T cd05615         298 PVLTPPDQ-LVIANIDQADFEGFSYVN  323 (323)
T ss_pred             CCCCCCcc-cccccccccccCCCcccC
Confidence            54443222 223334567999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.54  E-value=3.1e-14  Score=102.45  Aligned_cols=102  Identities=35%  Similarity=0.709  Sum_probs=88.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      +|..++.++++||++||..+|.+|++.    ..+++.|+||..++|..+..+.+.||+.|..+...+..+|+.+++.+..
T Consensus       215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~----~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (316)
T cd05592         215 FPRWISKEAKDCLSKLFERDPTKRLGV----DGDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDREFTNEKV  290 (316)
T ss_pred             CCCCCCHHHHHHHHHHccCCHHHcCCC----hHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccccc
Confidence            567799999999999999999999986    4689999999999999999889999999999888889999999988877


Q ss_pred             CCCCCCCCCCCChhhcCCCCCceeccC
Q psy3349          83 ELTPPKDPRPLTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~F~~Fsy~~~  109 (111)
                      ..++.. .......++..|.+|.|.+|
T Consensus       291 ~~~~~~-~~~~~~~~~~~~~~~~~~~~  316 (316)
T cd05592         291 RLSPVD-KKLLASMDQEQFRGFSFTNP  316 (316)
T ss_pred             cCCCcc-ccccccccccccCCCcccCc
Confidence            776643 33445678899999999986

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.53  E-value=5.4e-14  Score=101.77  Aligned_cols=106  Identities=30%  Similarity=0.585  Sum_probs=84.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..++.++++||++||..+|.+|+++.. .|+.+|++||||++++|+.+..+++.||+.|.+....+..+|++.++.+
T Consensus       223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (329)
T cd05618         223 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNE  302 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCCCCCcccchhcCcccccC
Confidence            467889999999999999999999998643 2678999999999999999999999999999987777778888767666


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ....++... ..........|.||.|.+
T Consensus       303 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~  329 (329)
T cd05618         303 PVQLTPDDD-DIVRKIDQSEFEGFEYIN  329 (329)
T ss_pred             CccCCCCcc-cccccccccccCCCcccC
Confidence            555554322 222224567899998875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.53  E-value=4.7e-14  Score=101.49  Aligned_cols=103  Identities=33%  Similarity=0.672  Sum_probs=85.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||..||.+|++.    ..++++||||.+++|..+..+.+.+|+.|......+.++|+.++..+.
T Consensus       214 ~~~~~~~~~~~~li~~~l~~dP~~R~~~----~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (316)
T cd05620         214 HYPRWITKESKDILEKLFERDPTRRLGV----VGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDREFLSEK  289 (316)
T ss_pred             CCCCCCCHHHHHHHHHHccCCHHHcCCC----hHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCccccccC
Confidence            3567799999999999999999999985    478999999999999999989999999999888888999998887765


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceeccC
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~~  109 (111)
                      +..+.. .........+..|.||+|.+|
T Consensus       290 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~  316 (316)
T cd05620         290 PRLSYS-DKNLIDSMDQSAFAGFSFINP  316 (316)
T ss_pred             cccCCC-cccccccccccCcCCCcccCC
Confidence            555442 222334467889999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.50  E-value=1.5e-13  Score=99.46  Aligned_cols=109  Identities=30%  Similarity=0.602  Sum_probs=88.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||+++|.+|++.....+.+|++|+||.+++|..+..+.+.||+.|.+.+..++..|+.+++.+.
T Consensus       213 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (328)
T cd05593         213 KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQT  292 (328)
T ss_pred             cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCcccccCC
Confidence            46788999999999999999999999866667899999999999999999999999999999988888999999888876


Q ss_pred             CCCCCCCCCC-----CCChhhcCCCCCceeccCC
Q psy3349          82 PELTPPKDPR-----PLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        82 ~~~~~~~~~~-----~~~~~~~~~F~~Fsy~~~~  110 (111)
                      ...+++....     .........|.+|+|.+.+
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (328)
T cd05593         293 ITITPPEKYDEDGMDCMDNERRPHFPQFSYSASG  326 (328)
T ss_pred             cccCCccccccccccccccccccccCCceeeCCC
Confidence            5544332110     1111235679999998765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=3.4e-13  Score=96.71  Aligned_cols=102  Identities=35%  Similarity=0.614  Sum_probs=83.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+++++++||.+||..+|.+|++.  ..+.+++.||||..++|..+..+.+.+++.|.+.+..++++|+.+++...
T Consensus       211 ~~~~~~~~~~~~li~~~L~~dp~~R~~~--~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (312)
T cd05585         211 RFPDGFDRDAKDLLIGLLSRDPTRRLGY--NGAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEFTREK  288 (312)
T ss_pred             CCCCcCCHHHHHHHHHHcCCCHHHcCCC--CCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCccccccc
Confidence            4677899999999999999999999975  35799999999999999999999999999999888889999998888765


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCcee
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTY  106 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy  106 (111)
                      +..+.. .........+..|.+|+|
T Consensus       289 ~~~~~~-~~~~~~~~~~~~~~~~~~  312 (312)
T cd05585         289 PIDSVV-DDSHLSETVQQQFGGWSY  312 (312)
T ss_pred             cccCCC-ccccccchhccccCCCCC
Confidence            544332 122233445788999987

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.46  E-value=4.5e-13  Score=96.56  Aligned_cols=106  Identities=37%  Similarity=0.747  Sum_probs=86.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||+++|.+|+++....+.+++.||||...+|..+..+.+.+|+.+......+.+.|+..++...
T Consensus       218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (323)
T cd05584         218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDSKFTRQT  297 (323)
T ss_pred             CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCchhcccc
Confidence            46778999999999999999999999766667899999999999999999999999999988877778888888777766


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceeccC
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~~  109 (111)
                      +..++....  ........|.||+|.++
T Consensus       298 ~~~~~~~~~--~~~~~~~~~~~~~~~~~  323 (323)
T cd05584         298 PVDSPDDST--LSESANQIFLGFTYVAP  323 (323)
T ss_pred             cccCccccc--cccccccCcCCCeecCC
Confidence            555443221  22234579999999875

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.45  E-value=5.5e-13  Score=96.19  Aligned_cols=103  Identities=34%  Similarity=0.719  Sum_probs=84.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      +|..++..+++||++||..+|.+|+++....++++++||||.+++|..+..+.+.+|+.|......+..+|..++....+
T Consensus       230 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (332)
T cd05614         230 FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSIRNELDVGNFAEEFTNLEP  309 (332)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCCc
Confidence            56678999999999999999999998755568999999999999999999889999999998888888888877766655


Q ss_pred             CCCCCCCCCCCChhhcCCCCCceeccC
Q psy3349          83 ELTPPKDPRPLTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~F~~Fsy~~~  109 (111)
                      ..++...    .......|.||+|+.+
T Consensus       310 ~~~~~~~----~~~~~~~~~~~~~~~~  332 (332)
T cd05614         310 VYSPAGT----PPSGARVFQGYSFVAP  332 (332)
T ss_pred             ccCCCCC----CcccccccCCceecCC
Confidence            5444322    2234578999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.44  E-value=5.1e-13  Score=97.36  Aligned_cols=75  Identities=31%  Similarity=0.554  Sum_probs=67.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCcc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEE   76 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~   76 (111)
                      .+|..++.++++||++||+.+|.+|++....+++++++||||.+++|..+..+.+.+|+.|......+.++|...
T Consensus       246 ~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  320 (340)
T PTZ00426        246 YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERV  320 (340)
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCCcchhhcCCC
Confidence            467889999999999999999999997655578999999999999999999999999999998887778887653

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.44  E-value=6.3e-13  Score=95.72  Aligned_cols=104  Identities=30%  Similarity=0.577  Sum_probs=82.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      ++..++.++++||++||+++|.+|++.. ..+.++++||||..++|..+..+.+.+|+.|.+....+...|+.++.....
T Consensus       215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (323)
T cd05575         215 LKPNISVSARHLLEGLLQKDRTKRLGAK-DDFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDPEFTEEPV  293 (323)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHhCCCCC-CCHHHHHcCCCcCCCCHHHHhhccCCCCcCCCCCCcchhhhcCcccccccc
Confidence            5567899999999999999999999874 467899999999999999999999999999998887888888877776644


Q ss_pred             CCCCCCCCCC-----CChhhcCCCCCceec
Q psy3349          83 ELTPPKDPRP-----LTDDEQNLFKDFTYM  107 (111)
Q Consensus        83 ~~~~~~~~~~-----~~~~~~~~F~~Fsy~  107 (111)
                      ..+.+.....     ........|.||||.
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (323)
T cd05575         294 PNSVGKSPDSVLVSASVKEADDAFLGFSYA  323 (323)
T ss_pred             ccccCCCcccccccccccccccccCCCccC
Confidence            4332222111     123457899999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.43  E-value=8.4e-13  Score=95.24  Aligned_cols=107  Identities=34%  Similarity=0.628  Sum_probs=87.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+++++++||++||+++|.+|++.....+.++++|+||.+++|..+..+.+.||+.|...+..++..|+.+++...
T Consensus       213 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T cd05595         213 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQS  292 (323)
T ss_pred             CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCcccccCC
Confidence            46788999999999999999999999766567899999999999999999988899999999988888999998888877


Q ss_pred             CCCCCCCCCCCC---ChhhcCCCCCceecc
Q psy3349          82 PELTPPKDPRPL---TDDEQNLFKDFTYMA  108 (111)
Q Consensus        82 ~~~~~~~~~~~~---~~~~~~~F~~Fsy~~  108 (111)
                      ...+++......   ....-..|..|||..
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (323)
T cd05595         293 ITITPPDRYDSLGLLELDQRTHFPQFSYSA  322 (323)
T ss_pred             ccCCCCcccccccccccccccccCCCcccC
Confidence            655554322111   122346799999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.42  E-value=1.1e-12  Score=94.20  Aligned_cols=103  Identities=33%  Similarity=0.701  Sum_probs=80.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+++++++||++||+.+|.+|+++....+.+++.|+||..++|..+..+...||+.|......+...++..+....
T Consensus       216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (318)
T cd05582         216 GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFDPEFTSRT  295 (318)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCCCCCCcchhhhcCcccccCc
Confidence            35778999999999999999999999976556899999999999999999988899999888766666667776665443


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceec
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYM  107 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~  107 (111)
                      +...+.   ...+......|.||||+
T Consensus       296 ~~~~~~---~~~s~~~~~~~~~~~~~  318 (318)
T cd05582         296 PKDSPG---IPPSANAHQLFRGFSFV  318 (318)
T ss_pred             cccCCC---CccccccccccCCCEeC
Confidence            332221   11233456799999985

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.39  E-value=2.4e-12  Score=92.76  Aligned_cols=106  Identities=27%  Similarity=0.504  Sum_probs=81.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      ++...+.++.++|++||+++|.+|++.. ..+.+++.||||.+++|..+.++.+++|+.|......+.++|+..+..+..
T Consensus       215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~-~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (325)
T cd05604         215 LRPGASLTAWSILEELLEKDRQRRLGAK-EDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDAVFTEETV  293 (325)
T ss_pred             CCCCCCHHHHHHHHHHhccCHHhcCCCC-CCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCCccccCCc
Confidence            4567899999999999999999999863 357899999999999999999899999999988888888999877666543


Q ss_pred             CCCCCCCCC-----CCChhhcCCCCCceeccC
Q psy3349          83 ELTPPKDPR-----PLTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        83 ~~~~~~~~~-----~~~~~~~~~F~~Fsy~~~  109 (111)
                      ..+......     .....-+..|.||+|.+|
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (325)
T cd05604         294 PYSVCFSSDYSIVNASVLEADDAFVGFSYAPP  325 (325)
T ss_pred             ccCcccccccccccccccccccccCCCEecCC
Confidence            322211110     111234678999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.39  E-value=1.8e-12  Score=93.79  Aligned_cols=97  Identities=28%  Similarity=0.468  Sum_probs=75.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||+.||.+|+++....+.+|+.||||.+++|+.+..+.+.+|..+.+....++.+|... ... 
T Consensus       233 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s-  310 (329)
T PTZ00263        233 KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKY-PDS-  310 (329)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCcccchhccCC-ccc-
Confidence            467789999999999999999999999766778999999999999999999888888888777777778888742 211 


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCc
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDF  104 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~F  104 (111)
                      +.    .....+....+..|.||
T Consensus       311 ~~----~~~~~~~~~~~~~~~~~  329 (329)
T PTZ00263        311 PV----DRLPPLTAAQQAEFAGF  329 (329)
T ss_pred             cc----ccCCCCchhhhhhcCCC
Confidence            11    11122333456778776

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=3.9e-12  Score=91.78  Aligned_cols=100  Identities=39%  Similarity=0.716  Sum_probs=78.1

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .++.++++||++||..+|.+|+++. ..+.+++.||||..++|+.+..+.+.+|+.|......+.++|+.++........
T Consensus       220 ~~~~~~~~li~~~L~~~P~~R~~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (330)
T cd05586         220 VLSDEGRQFVKGLLNRNPQHRLGAH-RDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFDPEFTNSSLLNA  298 (330)
T ss_pred             cCCHHHHHHHHHHcCCCHHHCCCCC-CCHHHHhcCccccCCCHHHHHhCCCCCCccCCCCCCcchhhcCccccccccccc
Confidence            3799999999999999999999752 357899999999999999999899999999988887888888876665532211


Q ss_pred             -----------CCCCCCCCChhhcCCCCCcee
Q psy3349          86 -----------PPKDPRPLTDDEQNLFKDFTY  106 (111)
Q Consensus        86 -----------~~~~~~~~~~~~~~~F~~Fsy  106 (111)
                                 +.....+.+...++.|+||+|
T Consensus       299 ~~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~~  330 (330)
T cd05586         299 GIVPWEDVPGLPGANSTPLSSSVQENFRGFTF  330 (330)
T ss_pred             ccccccccccCCCCCCCcCCHHHHhhcCCCCC
Confidence                       111222334456889999997

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.34  E-value=7.9e-12  Score=90.10  Aligned_cols=108  Identities=31%  Similarity=0.628  Sum_probs=84.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+++++++||++||++||.+|++.....+.++++|+||.++.|..+..+...||+.|......++..|++.++...
T Consensus       214 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (325)
T cd05594         214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQM  293 (325)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCchhhcCc
Confidence            46778999999999999999999999755445899999999999999999888889999999888888999998887765


Q ss_pred             CCCCCCCCCCC---CChhhcCCCCCceeccC
Q psy3349          82 PELTPPKDPRP---LTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        82 ~~~~~~~~~~~---~~~~~~~~F~~Fsy~~~  109 (111)
                      ....+......   ..+.....|.+++|.+.
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (325)
T cd05594         294 ITITPPDQDDSMETVDNERRPHFPQFSYSAS  324 (325)
T ss_pred             cccCCCcccccccccccccccccCCceecCC
Confidence            44444322111   12233567888887654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=3.3e-12  Score=90.73  Aligned_cols=74  Identities=36%  Similarity=0.709  Sum_probs=67.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE   75 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~   75 (111)
                      .+|..++..+++||++||+.||.+|+++....+.+++.|+||..++|..+..+...||..|.+....++.+|+.
T Consensus       216 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  289 (291)
T cd05612         216 EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDD  289 (291)
T ss_pred             CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCccccccccC
Confidence            46778999999999999999999999876667899999999999999999999999999999988888998875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0592|consensus

Probab=99.33  E-value=2.4e-12  Score=97.92  Aligned_cols=49  Identities=29%  Similarity=0.498  Sum_probs=45.4

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHR   54 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~   54 (111)
                      +.||.++++.|+|||++||.+||.+|+|+     .+|++||||.+|||+.|.++
T Consensus       304 y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~-----~qIk~HpFF~~Vdw~nlw~~  352 (604)
T KOG0592|consen  304 YEFPEGFPEDARDLIKKLLVRDPSDRLTS-----QQIKAHPFFEGVDWENLWQQ  352 (604)
T ss_pred             ccCCCCCCHHHHHHHHHHHccCccccccH-----HHHhhCcccccCChhhhhhc
Confidence            46899999999999999999999999995     99999999999999998543

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.30  E-value=1.2e-11  Score=89.23  Aligned_cols=106  Identities=28%  Similarity=0.565  Sum_probs=80.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      ++..++.++++||++||+++|.+|++.. ..+.++++|+||..++|+.+..++..+|+.|.+....++.+|+..+.....
T Consensus       215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (325)
T cd05602         215 LKPNITNSARHLLEGLLQKDRTKRLGAK-DDFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPV  293 (325)
T ss_pred             CCCCCCHHHHHHHHHHcccCHHHCCCCC-CCHHHHhcCcccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcCCccccCCc
Confidence            4567899999999999999999999873 357799999999999999999999999999988877788888876665543


Q ss_pred             CCCCCCCCCC-----CChhhcCCCCCceeccC
Q psy3349          83 ELTPPKDPRP-----LTDDEQNLFKDFTYMAD  109 (111)
Q Consensus        83 ~~~~~~~~~~-----~~~~~~~~F~~Fsy~~~  109 (111)
                      ..+....+..     ........|.||+|-+|
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  325 (325)
T cd05602         294 PNSIGQSPDSILVTASVKEAAEAFLGFSYAPP  325 (325)
T ss_pred             ccccCCCchhhhhcccccccccccCCCccCCC
Confidence            3222211111     11234556899999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.26  E-value=2.9e-11  Score=88.32  Aligned_cols=96  Identities=24%  Similarity=0.442  Sum_probs=67.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTP   86 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~~   86 (111)
                      +|.++++||.+||. +|.+|++.  .++.+|++||||.+++|..+..+...+|+  .+.+..++++|+............
T Consensus       263 ~s~~~~~li~~l~~-~p~~R~~~--~~~~ei~~hp~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  337 (360)
T cd05627         263 ISEKAKDLILRFCT-DSENRIGS--NGVEEIKSHPFFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFPESDILQPAE  337 (360)
T ss_pred             CCHHHHHHHHHhcc-ChhhcCCC--CCHHHHhcCCCCCCCCHHHHhcCCCCCCc--cCCCcchhhhcCCCCcccccCCCc
Confidence            79999999999885 99999985  46899999999999999999877655553  456677888887532222111111


Q ss_pred             CCCCCCCChhhcCCCCCceecc
Q psy3349          87 PKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        87 ~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                       ..........+..|.+|+|..
T Consensus       338 -~~~~~~~~~~~~~~~~~~~~~  358 (360)
T cd05627         338 -NTIEPDYKSKDWVFLNYTYKR  358 (360)
T ss_pred             -cccccccCcCCcccCCceeec
Confidence             111111224567899999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=2.3e-11  Score=88.02  Aligned_cols=94  Identities=36%  Similarity=0.590  Sum_probs=72.0

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTP   86 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~~   86 (111)
                      +++++++||.+||. +|.+|+++    +.++++||||.+++|+.+.  ...+|++|.+.+..++.+|+..-.........
T Consensus       257 ~~~~~~~li~~ll~-dp~~R~~s----~~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (350)
T cd05573         257 VSPEAIDLICRLLC-DPEDRLGS----FEEIKSHPFFKGIDWENLR--ETKPPFVPELSSPLDTSNFDDFEDDKDLSDYL  329 (350)
T ss_pred             CCHHHHHHHHHHcc-ChhhcCCC----HHHHhcCCCcCCCCHHHHh--hCCCCcCCCCCCchhhhhcCCCCccccccccc
Confidence            59999999999997 99999984    6999999999999999885  66688999988888888888644443332222


Q ss_pred             CCCCCCCChhhcCCCCCceec
Q psy3349          87 PKDPRPLTDDEQNLFKDFTYM  107 (111)
Q Consensus        87 ~~~~~~~~~~~~~~F~~Fsy~  107 (111)
                      ...........+..|.||||.
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~  350 (350)
T cd05573         330 SQNSKKLNKGKQLAFVGFTYK  350 (350)
T ss_pred             ccccccccccccCccCCCccC
Confidence            222223344567889999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.26  E-value=8.4e-12  Score=88.30  Aligned_cols=62  Identities=31%  Similarity=0.531  Sum_probs=57.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      .++..++.++++||++||+.+|.+|+++...++.++++||||.+++|..+.++.+.|||.|.
T Consensus       223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05631         223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD  284 (285)
T ss_pred             cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence            35667999999999999999999999976667899999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>smart00133 S_TK_X Extension to Ser/Thr-type protein kinases

Probab=99.25  E-value=7.6e-12  Score=70.68  Aligned_cols=64  Identities=41%  Similarity=0.815  Sum_probs=49.9

Q ss_pred             CCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          44 RHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        44 ~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ++|||+.|+++++.|||+|.+.+..++++|+.+++.+.+..++... .......+..|.||+|+.
T Consensus         1 ~~idW~~l~~r~~~pP~~P~~~~~~d~s~fd~~~~~~~~~~s~~~~-~~~~~~~~~~F~gfsy~~   64 (64)
T smart00133        1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDDEFTEETPVLTPVDS-PASGGSQQEPFRGFSYVF   64 (64)
T ss_pred             CCCCHHHHHhCCCCCCcccccCCccHHhHcCCcCCCCCCCCCCCCc-cccccccccccCCCcccC
Confidence            4799999999999999999999999999999888888777665422 111212257899999963

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.22  E-value=8.3e-11  Score=84.56  Aligned_cols=105  Identities=30%  Similarity=0.551  Sum_probs=79.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|...+.++++||.+||+++|.+|++.. ..+.++++|+||..++|..+..+.+.+|+.|......+...++.+++...
T Consensus       214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (321)
T cd05603         214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK-ADFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFDPEFTQEA  292 (321)
T ss_pred             CCCCCCCHHHHHHHHHHccCCHhhcCCCC-CCHHHHhCCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCCcccccc
Confidence            45677899999999999999999999863 24679999999999999999989999999988877778888887777655


Q ss_pred             CCCCCCCCCC--CCChhhcCCCCCceec
Q psy3349          82 PELTPPKDPR--PLTDDEQNLFKDFTYM  107 (111)
Q Consensus        82 ~~~~~~~~~~--~~~~~~~~~F~~Fsy~  107 (111)
                      ...+....+.  ......-..|.||+|.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (321)
T cd05603         293 VSSSVGQTPDLTASSSSASSAFLGFSYA  320 (321)
T ss_pred             cccccCCCCcccccccccccccCCCccC
Confidence            4443322211  1111224458999885

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=5.8e-11  Score=86.61  Aligned_cols=98  Identities=27%  Similarity=0.476  Sum_probs=71.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .+|+++++||++||. +|.+|++.  .++.+++.||||++++|+.+.  ...+|++|...+..+.++|+...+.......
T Consensus       265 ~~s~~~~~li~~ll~-~p~~R~~~--~~~~~ll~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (364)
T cd05599         265 PLSPEAKDLIKRLCC-EAERRLGN--NGVNEIKSHPFFKGVDWEHIR--ERPAPIIPELKSITDTSNFDDFEEIDLDVPT  339 (364)
T ss_pred             CCCHHHHHHHHHHcc-CHhhcCCC--CCHHHHhcCCCcCCCCHHHHh--hcCCCCCCCCCCchhhhhccccccccccccC
Confidence            479999999999997 99999984  357999999999999999874  5568888988888888888752222211111


Q ss_pred             CCCCCCCCChhhcCCCCCceecc
Q psy3349          86 PPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        86 ~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      .+..........+..|.||+|.+
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~  362 (364)
T cd05599         340 SPGPPRGKIKSKDLAFIGYTYKR  362 (364)
T ss_pred             CCccccccccccCCCCCCCeeeC
Confidence            11112223345678899999975

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.16  E-value=2.1e-10  Score=83.96  Aligned_cols=101  Identities=24%  Similarity=0.381  Sum_probs=68.0

Q ss_pred             CCC--CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           3 DKR--FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         3 ~p~--~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      +|.  .+|.++++||.+||+ ++.+|++.  .++++|++||||.+++|+.+..+...+|+  .+.+..++++|+......
T Consensus       257 ~p~~~~~s~~~~~li~~l~~-~~~~r~~r--~~~~ei~~hp~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  331 (363)
T cd05628         257 FPPEVPISEKAKDLILRFCC-EWEHRIGA--PGVEEIKTNPFFEGVDWEHIRERPAAIPI--EIKSIDDTSNFDEFPDSD  331 (363)
T ss_pred             CCCcCCCCHHHHHHHHHHcC-ChhhcCCC--CCHHHHhCCCCCCCCCHHHHHhCCCCCCc--cCCCcchhhccCCCCccc
Confidence            454  379999999999997 78888763  36899999999999999999766555443  456667788888533322


Q ss_pred             CCCCCCCC--CCCCCChhhcCCCCCceecc
Q psy3349          81 KPELTPPK--DPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        81 ~~~~~~~~--~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ........  .+..........|.||+|..
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (363)
T cd05628         332 ILKPTVATSNHPETDYKNKDWVFINYTYKR  361 (363)
T ss_pred             cccccccccCCcccccCcCCcccCCceeec
Confidence            21111111  11122223466799999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.16  E-value=1.9e-10  Score=84.66  Aligned_cols=98  Identities=28%  Similarity=0.364  Sum_probs=71.2

Q ss_pred             CCC--CCCHHHHHHHHHhhccCccc--ccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCcccc
Q psy3349           3 DKR--FVGEVGLERWKELLRKNPER--RLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFT   78 (111)
Q Consensus         3 ~p~--~~s~~a~dli~~LL~~~p~~--Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~   78 (111)
                      +|.  .+|.++++||++||+.+|.+  |.+     +.+++.||||++.+|.....+...+|++|......++++|+....
T Consensus       268 ~~~~~~~s~~~~~li~~~L~~~p~r~~R~s-----~~ell~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  342 (370)
T cd05596         268 FPDDIEISKQAKDLICAFLTDREVRLGRNG-----VDEIKSHPFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFDDIED  342 (370)
T ss_pred             CCCcCCCCHHHHHHHHHHccChhhccCCCC-----HHHHhcCcccCCCChhhHHhcCCCcCccCcCCCcchhhhcCCccc
Confidence            454  47999999999999988876  665     699999999999999877778888999999888888888886544


Q ss_pred             CCCCCCCCCCCCCCCChhhcCCCCCceec
Q psy3349          79 SEKPELTPPKDPRPLTDDEQNLFKDFTYM  107 (111)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~F~~Fsy~  107 (111)
                      ......+. ..+.... ..+..|.||+|.
T Consensus       343 ~~~~~~~~-~~~~~~~-~~~~~~~~~~~~  369 (370)
T cd05596         343 DDKNEETF-PLPKAFA-GNQLPFIGFTYS  369 (370)
T ss_pred             cccccccC-CCccccc-cccCccCCCeec
Confidence            43222211 1111122 224459999986

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.15  E-value=1.8e-10  Score=82.98  Aligned_cols=94  Identities=28%  Similarity=0.422  Sum_probs=68.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .++.++++||++||+ +|.+|++     +.+++.||||..++|..+.  ...||+.|.+....+.++|+...........
T Consensus       235 ~~~~~~~~li~~ll~-~p~~R~t-----~~~l~~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (330)
T cd05601         235 KVSSDFLDLIQSLLC-GQKERLG-----YEGLCCHPFFSKIDWNNIR--NSLPPFVPTLKSDDDTSNFDEPEKNSTRRSQ  306 (330)
T ss_pred             CCCHHHHHHHHHHcc-ChhhCCC-----HHHHhCCCCcCCCCHHHHh--hCCCCccCcCCCcchhhhcCCCccccccccc
Confidence            479999999999997 9999998     4999999999999999885  4668888988888888888764444332221


Q ss_pred             CCCC--CCCCChhhcCCCCCceec
Q psy3349          86 PPKD--PRPLTDDEQNLFKDFTYM  107 (111)
Q Consensus        86 ~~~~--~~~~~~~~~~~F~~Fsy~  107 (111)
                      ....  ...-.......|.||+|.
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~  330 (330)
T cd05601         307 SSTTQLKPNGFSGKDLPFVGFSFI  330 (330)
T ss_pred             cccccCCCcCCCCCCCCccCceeC
Confidence            1111  011112456789999984

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.11  E-value=4.3e-10  Score=82.93  Aligned_cols=98  Identities=28%  Similarity=0.350  Sum_probs=68.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .++..+++||.+||+ ++.+|++.  .++.++++||||.+..|.....+...+|+.|.+....+.++|+..........+
T Consensus       273 ~~s~~~~~li~~~L~-~~~~r~~R--~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  349 (370)
T cd05621         273 EISKHAKNLICAFLT-DREVRLGR--NGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVET  349 (370)
T ss_pred             cCCHHHHHHHHHHcc-CchhccCC--CCHHHHhcCcccCCCCcChHhcCCCCCCcCCCCCCcchhhhcCCcccccccccc
Confidence            479999999999998 55555532  247999999999997776666677889999999888888898754333322222


Q ss_pred             CCCCCCCCChhhcCCCCCceecc
Q psy3349          86 PPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        86 ~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      .+......  ..+..|.||+|+.
T Consensus       350 ~~~~~~~~--~~~~~~~~~~~~~  370 (370)
T cd05621         350 FPIPKAFV--GNQLPFIGFTYYR  370 (370)
T ss_pred             CCCCcccc--ccccccCCCEecC
Confidence            22111122  2358899999973

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.11  E-value=3.6e-10  Score=83.18  Aligned_cols=68  Identities=32%  Similarity=0.563  Sum_probs=58.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF   77 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~   77 (111)
                      .+++++++||.+|+. +|.+|++.  .++.+|++||||++++|.... .+..+|+.|.+....++++|+...
T Consensus       274 ~~s~~~~~li~~l~~-~p~~R~~~--~~~~ei~~hp~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  341 (382)
T cd05625         274 KLSPEASDLIIKLCR-GPEDRLGK--NGADEIKAHPFFKTIDFSSDL-RQQSAPYIPKITHPTDTSNFDPVD  341 (382)
T ss_pred             cCCHHHHHHHHHHcc-CHhHcCCC--CCHHHHhcCCCcCCcChHHHH-hcCCCCccCcCCCcchhhhcCCCC
Confidence            589999999999875 99999983  468999999999999998765 456789999998888999998643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=6.1e-10  Score=81.80  Aligned_cols=98  Identities=24%  Similarity=0.524  Sum_probs=71.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .++.++++||++||+ +|.+|++.  .++.+++.||||.+++|+.+  +.+.+|++|......+..+|........+...
T Consensus       274 ~~s~~~~dli~~lL~-~~~~r~~r--~~~~~~l~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (377)
T cd05629         274 HLSVEAEDLIRRLIT-NAENRLGR--GGAHEIKSHPFFRGVDWDTI--RQIRAPFIPQLKSITDTSYFPTDELEQVPEAP  348 (377)
T ss_pred             CCCHHHHHHHHHHhc-CHhhcCCC--CCHHHHhcCCCcCCCCHHHH--ccCCCCcccCCCCccccccCCccccccCcccc
Confidence            478999999999997 89999863  35899999999999999988  67889999998887788777655443322211


Q ss_pred             C----CCCCCCCChhhcCCCCCceecc
Q psy3349          86 P----PKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        86 ~----~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      .    ...........+..|.||||..
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (377)
T cd05629         349 ALKQAAPAQQEESVELDLAFIGYTYKR  375 (377)
T ss_pred             ccccccccccccccccCcccccceecC
Confidence            1    0111122234567899999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.07  E-value=5.8e-10  Score=82.18  Aligned_cols=97  Identities=24%  Similarity=0.378  Sum_probs=66.9

Q ss_pred             CCCHHHHHHHHHhhccCccc--ccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPER--RLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPE   83 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~--Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~   83 (111)
                      .++.++++||.+||+..+.+  |++     +.+|++||||.+++|.... +..++|+.|.+....++++|+.........
T Consensus       274 ~~s~~~~dli~~ll~~~~~~~~R~~-----~~~~l~hp~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  347 (381)
T cd05626         274 KLSPEAVDLITKLCCSAEERLGRNG-----ADDIKAHPFFSEVDFSSDI-RTQPAPYVPKISHPMDTSNFDPVEEESPWN  347 (381)
T ss_pred             CCCHHHHHHHHHHccCcccccCCCC-----HHHHhcCcccCCCChhHHh-hcCCCCccCcCCCcchhhhcCCCCcccccc
Confidence            48999999999998754443  555     6999999999999998865 466789999998888899998644332211


Q ss_pred             CCCCCC-------CCCCChhhcCCCCCceecc
Q psy3349          84 LTPPKD-------PRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        84 ~~~~~~-------~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ....+.       .........+.|.||||..
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (381)
T cd05626         348 DASGDSTRTWDTLCSPNGKHPEHAFYEFTFRR  379 (381)
T ss_pred             cCCccchhhhccccCcccccccccccccEeec
Confidence            000000       0011112367899999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.03  E-value=7e-10  Score=78.47  Aligned_cols=74  Identities=32%  Similarity=0.652  Sum_probs=65.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE   75 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~   75 (111)
                      .+|..++...+++|+++|..+|.+|++.....+++++.||||..++|..+....+.+|+.|......+++.|+.
T Consensus       216 ~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (290)
T cd05580         216 RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDD  289 (290)
T ss_pred             cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCCCccccccccC
Confidence            36777899999999999999999999765567899999999999999999999999999998877777777763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.02  E-value=2e-09  Score=79.33  Aligned_cols=98  Identities=30%  Similarity=0.434  Sum_probs=68.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .++.++++||.+||. ++.+|++.  .++.+|++|+||.+..|.....+...+|++|......+.++|+..........+
T Consensus       273 ~~s~~~~~li~~~L~-~~~~r~~r--~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (371)
T cd05622         273 DISKEAKNLICAFLT-DREVRLGR--NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDIEEDKGEEET  349 (371)
T ss_pred             CCCHHHHHHHHHHcC-ChhhhcCC--CCHHHHhcCcccCCCChhHHhcCCCCCCCCCCCCCcchhhhcCCCccccccccc
Confidence            589999999999997 77777763  368999999999997776655578888999988777777777643322221111


Q ss_pred             CCCCCCCCChhhcCCCCCceecc
Q psy3349          86 PPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        86 ~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      .+. +..... .+..|.||+|++
T Consensus       350 ~~~-~~~~~~-~~~~~~~~~~~~  370 (371)
T cd05622         350 FPI-PKAFVG-NQLPFVGFTYYS  370 (371)
T ss_pred             CCC-Cccccc-cccccCCCeecC
Confidence            111 111122 247899999985

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.00  E-value=6e-10  Score=78.63  Aligned_cols=60  Identities=28%  Similarity=0.594  Sum_probs=53.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      +|..++.++++||.+||+.+|.+|++....-++++++||||++++|..+.....++|+.|
T Consensus       220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  279 (280)
T cd05608         220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP  279 (280)
T ss_pred             CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence            566789999999999999999999976544579999999999999999988888899887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.00  E-value=3e-09  Score=76.93  Aligned_cols=96  Identities=29%  Similarity=0.530  Sum_probs=64.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC--CCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE--KPE   83 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~--~~~   83 (111)
                      .+++++++||++||+. +..|++.  .++.++++||||.+++|+.+.  ...+|++|...+..++++++..-...  ...
T Consensus       235 ~~s~~~~~li~~ll~~-~~~r~~r--~~~~~~~~h~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (332)
T cd05623         235 DVSEDAKDLIRRLICS-REHRLGQ--NGIEDFKQHPFFTGIDWDNIR--NCEAPYIPEVSSPTDTSNFDVDDDCLKNSET  309 (332)
T ss_pred             cCCHHHHHHHHHHccC-hhhhcCC--CCHHHHhCCCCcCCCCHHHHh--hCCCCccCCCCCCcccccCCCCcccccccCC
Confidence            4799999999999985 4556552  358999999999999999984  56678888877776766664321111  111


Q ss_pred             CCCCCCCCCCChhhcCCCCCceecc
Q psy3349          84 LTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        84 ~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ..++.  ....+.-...|.+|||+.
T Consensus       310 ~~~~~--~~~~~~~~~~~~~~~~~~  332 (332)
T cd05623         310 MPPPS--HTAFSGHHLPFVGFTYTS  332 (332)
T ss_pred             CCCCC--ccccccCCCCcCCeeecC
Confidence            11111  112233467899999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.00  E-value=6.5e-10  Score=78.72  Aligned_cols=61  Identities=30%  Similarity=0.486  Sum_probs=54.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      ++..++.++++||++||+.+|.+|+++...++.++++||||..++|..+...+..|||.|.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05630         224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPD  284 (285)
T ss_pred             cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence            4556889999999999999999999975557899999999999999999988899999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.96  E-value=1.3e-09  Score=77.07  Aligned_cols=61  Identities=33%  Similarity=0.548  Sum_probs=54.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      +|..++..+++||.+||..||.+|+++....+.++++|+||...+|..+.++.++||+.|.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05605         224 YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCPD  284 (285)
T ss_pred             cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCCC
Confidence            4566899999999999999999999875556899999999999999999999999999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.92  E-value=2e-09  Score=75.59  Aligned_cols=61  Identities=28%  Similarity=0.622  Sum_probs=53.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      +|..++++++++|++||+.+|.+|++.....+.+++.||||..++|..+.+...+|||.|+
T Consensus       217 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~  277 (277)
T cd05577         217 YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIPD  277 (277)
T ss_pred             CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCCCCC
Confidence            4566899999999999999999999765556899999999999999999888889998874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.91  E-value=2.6e-09  Score=75.46  Aligned_cols=61  Identities=26%  Similarity=0.539  Sum_probs=53.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      +|..++.+++++|+++|.++|.+|+++....+.++++||||++++|..+...++.+|.+|.
T Consensus       218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  278 (279)
T cd05633         218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPLIPP  278 (279)
T ss_pred             CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcCCCCCCCCCC
Confidence            4567899999999999999999999865566899999999999999998877777776664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.88  E-value=1.3e-08  Score=73.74  Aligned_cols=65  Identities=42%  Similarity=0.761  Sum_probs=53.0

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCcc
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEE   76 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~   76 (111)
                      ++.++++||.+||+. +.+|++.  .+++++++|+||.+++|+.+  +...+|++|......+.++|+..
T Consensus       236 ~~~~~~~li~~ll~~-~~~~~~~--~~~~~~~~h~~f~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~  300 (331)
T cd05624         236 VSEEAKDLIQRLICS-RERRLGQ--NGIEDFKKHAFFEGIDWENI--RNLEAPYIPDVSSPSDTSNFDVD  300 (331)
T ss_pred             CCHHHHHHHHHHccC-chhhcCC--CCHHHHhcCCCcCCCCHHHH--hhCCCCccCCCCCcchhhhcCCc
Confidence            689999999999985 4566653  46899999999999999988  46778899987777777777644

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=1.4e-08  Score=73.59  Aligned_cols=97  Identities=29%  Similarity=0.491  Sum_probs=64.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .++.++++||++||+. +.+|.+.  ..+.++++||||.+++|..+.  ...+|+.|...+..++++|+..-.......+
T Consensus       235 ~~~~~~~~li~~ll~~-~~~r~~r--~~~~~~l~hp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (331)
T cd05597         235 DVSEEAKDLIRRLICS-PETRLGR--NGLQDFKDHPFFEGIDWDNIR--NSTAPYVPEVSSPTDTSNFDVDDDDLRNTES  309 (331)
T ss_pred             CCCHHHHHHHHHHccC-cccccCC--CCHHHHhcCCCCCCCCHHHHh--hCCCCccCcCCCcchhhhcCCcccccccccc
Confidence            4799999999999985 5666542  247999999999999999885  4567888888777777777654332221111


Q ss_pred             CCCCCCCCChhhcCCCCCceec
Q psy3349          86 PPKDPRPLTDDEQNLFKDFTYM  107 (111)
Q Consensus        86 ~~~~~~~~~~~~~~~F~~Fsy~  107 (111)
                      .+...........-.+.+|+|+
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~  331 (331)
T cd05597         310 LPPSSHGAFSGNHLPFVGFTYT  331 (331)
T ss_pred             cCCCCcCcCCcCCCCCCceeeC
Confidence            1111111122345678888885

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.85  E-value=4.2e-09  Score=74.23  Aligned_cols=57  Identities=37%  Similarity=0.624  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      .++.++++||++||+++|.+|+++.. ..++++.|+||.+++|..+..+.++|||.|.
T Consensus       221 ~~~~~~~~li~~~L~~~P~~R~~~~~-~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~  277 (277)
T cd05607         221 NFTEESKDICRLFLAKKPEDRLGSRE-KNDDPRKHEFFKTINFPRLEAGLIPPPFVPD  277 (277)
T ss_pred             cCCHHHHHHHHHHhccCHhhCCCCcc-chhhhhcChhhcCCCHHHHhcCcCCCCCCCC
Confidence            57999999999999999999999621 2378999999999999999999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.83  E-value=5.6e-09  Score=73.86  Aligned_cols=61  Identities=36%  Similarity=0.611  Sum_probs=56.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      ++..++.++.+||.++|..+|.+|+++...++.+++.|+||+.++|..+..+++.|||+|.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05632         224 YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPD  284 (285)
T ss_pred             cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence            4566889999999999999999999987677899999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0606|consensus

Probab=98.82  E-value=2.9e-09  Score=86.50  Aligned_cols=66  Identities=35%  Similarity=0.648  Sum_probs=60.3

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCcc
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEE   76 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~   76 (111)
                      +.+||+++|.+||+.+|..|+|.  .|+-+++.|+||..+||..|+.++  ..|+|+....+|+++||..
T Consensus       284 ~p~Ea~dli~~LL~qnp~~Rlgt--~ga~evk~h~ff~~LDw~~llRqk--aefvpql~~eddtsyfdTR  349 (1205)
T KOG0606|consen  284 LPPEAQDLIEQLLRQNPLCRLGT--GGALEVKQHGFFQLLDWKSLLRQK--AEFVPQLESEDDTSYFDTR  349 (1205)
T ss_pred             CCHHHHHHHHHHHHhChHhhccc--chhhhhhhccceeecccchhhhhh--ccccccccccccchhhccc
Confidence            78999999999999999999997  488999999999999999997555  7889999999999999964

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.80  E-value=3.1e-08  Score=72.67  Aligned_cols=67  Identities=33%  Similarity=0.582  Sum_probs=56.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCcc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEE   76 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~   76 (111)
                      .++.++++||.+|+. +|.+|++.  +.+.++++||||.+++|..+. +...+|++|.+....++++|+..
T Consensus       270 ~~s~~~~~li~~l~~-~p~~R~~~--~t~~ell~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  336 (376)
T cd05598         270 KLSREASDLILRLCC-GAEDRLGK--NGADEIKAHPFFKGIDFASLI-RRQKAPYIPKITHPTDTSNFDPV  336 (376)
T ss_pred             CCCHHHHHHHHHHhc-CHhhcCCC--CCHHHHhCCCCcCCCCHHHHh-hcCCCCCCCcCCCcchhhhcCCC
Confidence            589999999999874 99999964  347999999999999999887 67788899988877788888753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.78  E-value=1.1e-08  Score=72.11  Aligned_cols=58  Identities=31%  Similarity=0.713  Sum_probs=51.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      .|..++.+++++|.++|+.+|.+|++.  +++.++++|+||++++|+.+.++...|||.|
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~R~t~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  288 (288)
T cd05583         231 FPKTMSAEARDFIQKLLEKDPKKRLGA--NGADEIKNHPFFQGIDWDDLAAKRIPAPFKP  288 (288)
T ss_pred             CCcccCHHHHHHHHHHhcCCHhhccCc--chHHHHhcCcccccCCHHHHhhhccCCCCCC
Confidence            455688999999999999999999986  4688999999999999999999999998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.72  E-value=2.7e-08  Score=70.11  Aligned_cols=60  Identities=28%  Similarity=0.565  Sum_probs=52.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      +|..+|.++++||++||.++|.+|+.+....+.++++||||++++|..+..++.+++.+|
T Consensus       218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  277 (278)
T cd05606         218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYPPPLIP  277 (278)
T ss_pred             CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhcccCCCCCC
Confidence            456689999999999999999999976545689999999999999999988887777665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PF00433 Pkinase_C: Protein kinase C terminal domain; InterPro: IPR017892 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.69  E-value=2.2e-09  Score=57.67  Aligned_cols=47  Identities=49%  Similarity=0.757  Sum_probs=30.2

Q ss_pred             cCCCCCCCCCCccccCCCCCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          64 VTDVGDVSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        64 ~~~~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      +++..|++|||.+|+.+.+..++......+....+..|.||||++++
T Consensus         2 v~~~~DtsnFD~eFt~~~~~~t~~~~~~~~~~~~~~~F~GFTy~~~s   48 (48)
T PF00433_consen    2 VKSETDTSNFDPEFTEEPPVDTPPSDPSPLSSSMQENFQGFTYVNPS   48 (48)
T ss_dssp             -SSTT-GTTSCHHHHTSSSSS--S--HHHHCTSSGGGGTT-CEETCT
T ss_pred             CCchhhhhhcCcccccCCCCCCCcccCCcccccccCcCCCCeecCCC
Confidence            56788999999999999988877411112233345569999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain is found in a large variety of protein kinases with different functions and dependencies. Protein kinase C, for example, is a calcium-activated, phospholipid-dependent serine- and threonine-specific enzyme. It is activated by diacylglycerol which, in turn, phosphorylates a range of cellular proteins. This domain is most often found associated with IPR000719 from INTERPRO.; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3E8D_A 1MRV_A 3E88_A 1GZO_A 1GZK_A 2JDO_A 2JDR_A 1MRY_A 1GZN_A 1O6L_A ....

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.62  E-value=7.8e-08  Score=67.83  Aligned_cols=60  Identities=33%  Similarity=0.722  Sum_probs=52.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      +|..++...++||+++|..+|.+|+++....+.+++.||||..++|+.+..+..++|+.|
T Consensus       231 ~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  290 (290)
T cd05613         231 YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAAKKVPAPFKP  290 (290)
T ss_pred             CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHhhccCCCCCCC
Confidence            455688999999999999999999987767789999999999999999988888777754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.57  E-value=9.5e-08  Score=69.02  Aligned_cols=63  Identities=30%  Similarity=0.606  Sum_probs=53.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE   75 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~   75 (111)
                      .++.++++||++||..+|.+|.+     +.++++||||.+++|..+.  ...||+.|......+..+|+.
T Consensus       228 ~~s~~~~~li~~~l~~~~~rr~s-----~~~ll~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  290 (333)
T cd05600         228 NLSDEAWDLITKLINDPSRRFGS-----LEDIKNHPFFKEVDWNELR--ELKPPFVPELESEIDTGYFDD  290 (333)
T ss_pred             ccCHHHHHHHHHHhhChhhhcCC-----HHHHHhCcccCCCCHHHHh--hCCCCCCCCCCCcchhhhccC
Confidence            46899999999999988888887     5999999999999999885  777899998776666666653

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.46  E-value=4.3e-07  Score=64.73  Aligned_cols=65  Identities=35%  Similarity=0.610  Sum_probs=53.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD   74 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~   74 (111)
                      .++.++++||++||..+|.+|+++  .++.+++.||||.+.+|..+...  ...++|+.....+.++||
T Consensus       241 ~~~~~~~~li~~~l~~~P~~R~~~--~~~~~ll~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  305 (305)
T cd05609         241 ALPADAQDLISRLLRQNPLERLGT--GGAFEVKQHRFFLGLDWNGLLRQ--KAEFIPQLESEDDTSYFD  305 (305)
T ss_pred             cCCHHHHHHHHHHhccChhhccCc--cCHHHHHhCccccCCCHHHHhhc--CCCCCCCCCCccccccCC
Confidence            478999999999999999999986  35799999999999999987633  357788876666666553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.39  E-value=3.3e-07  Score=63.58  Aligned_cols=48  Identities=33%  Similarity=0.690  Sum_probs=42.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .+|..++.+++++|++||..+|.+|++.-..++.++++||||.+++|+
T Consensus       214 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~  261 (262)
T cd05572         214 EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE  261 (262)
T ss_pred             CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence            356667899999999999999999999655568999999999999996

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0588|consensus

Probab=98.36  E-value=5.5e-07  Score=70.73  Aligned_cols=41  Identities=15%  Similarity=0.324  Sum_probs=37.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      .+|..+|.+|+|||+++|.+||.+|++     .++|++|||+.+..
T Consensus       230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT-----~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  230 EMPSNISSEAQDLLRRMLDVDPSTRIT-----TEEILKHPFLSGYT  270 (786)
T ss_pred             cCCCcCCHHHHHHHHHHhccCcccccc-----HHHHhhCchhhcCC
Confidence            579999999999999999999999999     49999999998754

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.31  E-value=4.5e-07  Score=62.85  Aligned_cols=42  Identities=29%  Similarity=0.707  Sum_probs=38.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .++++++++|+++|..+|.+|+++  .++.++++||||.+++|+
T Consensus       219 ~~~~~~~~~i~~~l~~~p~~R~~~--~~~~~~l~~~~~~~~~~~  260 (260)
T cd05611         219 FCSPEAVDLINRLLCMDPAKRLGA--NGYQEIKSHPFFKSINWD  260 (260)
T ss_pred             cCCHHHHHHHHHHccCCHHHccCC--CcHHHHHcChHhhcCCCC
Confidence            478999999999999999999986  457999999999999996

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0575|consensus

Probab=98.29  E-value=8e-07  Score=68.81  Aligned_cols=38  Identities=24%  Similarity=0.431  Sum_probs=35.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+|..+|.+|+|||.+||+.||.+|++     +++|+.|+||.
T Consensus       236 ~~P~~ls~~A~dLI~~lL~~~P~~Rps-----l~~vL~h~Ff~  273 (592)
T KOG0575|consen  236 SMPSHLSAEAKDLIRKLLRPNPSERPS-----LDEVLDHPFFK  273 (592)
T ss_pred             ccccccCHHHHHHHHHHhcCCcccCCC-----HHHHhcCHhhh
Confidence            578999999999999999999999998     59999999995

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.27  E-value=9.3e-07  Score=60.93  Aligned_cols=42  Identities=33%  Similarity=0.546  Sum_probs=38.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+|..++.++++||++||+.||.+|++.+..++++++.||||
T Consensus       196 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         196 NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            367779999999999999999999999877778999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.26  E-value=1.1e-06  Score=62.68  Aligned_cols=55  Identities=35%  Similarity=0.735  Sum_probs=46.1

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccccc
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV   64 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~   64 (111)
                      ++.+++++|++||.++|.+|+++. .++.+++.|+||.+++|..+.  ...||-+|.+
T Consensus       257 ~~~~~~~li~~~l~~~p~~R~s~~-~~~~~ll~~~~~~~~~~~~~~--~~~~~~~~~~  311 (316)
T cd05574         257 VSSSARDLIRKLLVKDPSKRLGSK-RGAAEIKQHPFFRGVNWALIR--HTTPPIIPRP  311 (316)
T ss_pred             cCHHHHHHHHHHccCCHhHCCCch-hhHHHHHcCchhhcCChhhcc--cCCCCCCCCc
Confidence            689999999999999999999842 356999999999999999874  4566666654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.23  E-value=1.4e-06  Score=69.07  Aligned_cols=63  Identities=27%  Similarity=0.532  Sum_probs=53.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE   75 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~   75 (111)
                      .++..+.++|.+||..+|.+|++     +.+++.|+||..++|+.+.  ...+||.|...+..|+.+|+.
T Consensus       605 ~~~~~~~~~l~~lL~~dP~~R~t-----a~e~l~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  667 (669)
T cd05610         605 KLSVNAQNAIEILLTMDPTKRAG-----LKELKQHPLFHGVDWENLQ--NQTMPFIPQPDDETDTSYFEA  667 (669)
T ss_pred             cCCHHHHHHHHHHcccChhHCcC-----HHHHHhCHhhcCCCHHHhc--ccCCCCCCCCCCccccccccc
Confidence            46788999999999999999998     5999999999999999885  455788887766667777653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0033|consensus

Probab=98.20  E-value=1.3e-06  Score=62.14  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=33.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..+|++|++||++||..||++|++     +.|.++|||..+
T Consensus       236 w~~is~~Ak~LvrrML~~dP~kRIt-----a~EAL~HpWi~~  272 (355)
T KOG0033|consen  236 WDTVTPEAKSLIRRMLTVNPKKRIT-----ADEALKHPWICN  272 (355)
T ss_pred             cCcCCHHHHHHHHHHhccChhhhcc-----HHHHhCCchhcc
Confidence            3569999999999999999999999     499999999875

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.17  E-value=2.4e-06  Score=58.77  Aligned_cols=40  Identities=35%  Similarity=0.812  Sum_probs=36.7

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ++.++.++|++||+.+|.+|++.  ..+.++++||||.+|+|
T Consensus       226 ~~~~~~~~i~~~l~~~p~~Rpt~--~~~~~~l~~~~~~~~~~  265 (265)
T cd05579         226 VSDEAIDLISKLLVPDPEKRLGA--KSIEEIKNHPFFKGIDW  265 (265)
T ss_pred             CCHHHHHHHHHHhcCCHhhcCCC--ccHHHHhcCccccCCCC
Confidence            38999999999999999999986  45799999999999999

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0615|consensus

Probab=98.17  E-value=1e-06  Score=65.94  Aligned_cols=38  Identities=21%  Similarity=0.368  Sum_probs=34.8

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      ..+|.+|++||++||..||++|.+     +.++++||||+.+.
T Consensus       407 ~~Iseea~dlI~~mL~VdP~~R~s-----~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  407 DRISEEALDLINWMLVVDPENRPS-----ADEALNHPWFKDAP  444 (475)
T ss_pred             hhhhHHHHHHHHHhhEeCcccCcC-----HHHHhcChhhhccc
Confidence            358999999999999999999998     59999999999765

>KOG0606|consensus

Probab=98.16  E-value=2.2e-06  Score=70.21  Aligned_cols=73  Identities=32%  Similarity=0.572  Sum_probs=62.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKP   82 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~   82 (111)
                      ..+.+|++++..||..++.+|+|.  .|+.+++.|+||..++|+.|..+  ..+|+|+..+..|+++|.+.|..+..
T Consensus      1060 ~~s~~aq~~~~~ll~~~~~qr~~a--~~~~e~k~~~~~~~~~~~~l~~q--~~~~~p~~~s~~dtS~~~~r~~~~~~ 1132 (1205)
T KOG0606|consen 1060 EGSYEAQDLINRLLTEEPTQRLGA--KGAAEVKGHPFFQDVDWENLALQ--KAEFVPQPESTQDTSYFESRFSEESQ 1132 (1205)
T ss_pred             ccChhhhhhhhhhhccCchhccCc--ccccccccCCccCCCCccccccc--cCccCCCCCCCCccchhhcccccccc
Confidence            489999999999999999999997  56789999999999999999544  46779988888899999987774433

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.14  E-value=1.7e-06  Score=61.60  Aligned_cols=38  Identities=18%  Similarity=0.226  Sum_probs=34.0

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .+.++++||++||+.||++|++     +.++++||||.++.+.
T Consensus       260 ~~~~~~dli~~mL~~dp~~R~s-----~~~~l~h~~f~~~~~~  297 (303)
T cd07869         260 YVNHAEDLASKLLQCFPKNRLS-----AQAALSHEYFSDLPPR  297 (303)
T ss_pred             CChHHHHHHHHHhccCchhccC-----HHHHhcCcccccCChh
Confidence            4578999999999999999998     4999999999988753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0604|consensus

Probab=98.11  E-value=1.9e-06  Score=62.70  Aligned_cols=35  Identities=26%  Similarity=0.482  Sum_probs=32.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|++|||||++||+.+|++||+     +.+++.|||..+
T Consensus       293 ~VSe~aKdlIR~LLkt~PteRlT-----I~~~m~hpwi~~  327 (400)
T KOG0604|consen  293 CVSEAAKDLIRKLLKTEPTERLT-----IEEVMDHPWINQ  327 (400)
T ss_pred             HHHHHHHHHHHHHhcCCchhhee-----HHHhhcCchhcc
Confidence            49999999999999999999998     699999999885

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.07  E-value=1.5e-06  Score=65.56  Aligned_cols=41  Identities=15%  Similarity=0.229  Sum_probs=35.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      +|...+.++++||++||+++|.+|++     +.+++.||||..+..
T Consensus       319 ~p~~~~~~~~~li~~~L~~dP~~R~t-----a~e~l~hp~f~~~~~  359 (440)
T PTZ00036        319 FPKGTPDDAINFISQFLKYEPLKRLN-----PIEALADPFFDDLRD  359 (440)
T ss_pred             hccCCCHHHHHHHHHHCCCChhHCcC-----HHHHhCChhHHhhhc
Confidence            45567899999999999999999998     499999999987544

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.02  E-value=4.5e-06  Score=59.09  Aligned_cols=33  Identities=21%  Similarity=0.401  Sum_probs=31.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.+++|||++||+.||.+|++     ++++++||||
T Consensus       256 ~~~~~~~dll~~mL~~dp~~R~t-----~~~~l~hp~f  288 (288)
T cd07871         256 RLDTDGIDLLSSLLLYETKSRIS-----AEAALRHSYF  288 (288)
T ss_pred             CCCHHHHHHHHHhcCcCcccCCC-----HHHHhcCCCC
Confidence            47899999999999999999998     5999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.01  E-value=4.1e-06  Score=58.87  Aligned_cols=33  Identities=30%  Similarity=0.403  Sum_probs=30.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+|.++++||++||+.||++|+++     .++++||||
T Consensus       255 ~~s~~~~dll~~~L~~~P~~R~s~-----~~~l~hp~f  287 (287)
T cd07848         255 ILSGVLLDLMKNLLKLNPTDRYLT-----EQCLNHPAF  287 (287)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCH-----HHHhcCCCC
Confidence            478899999999999999999984     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG4717|consensus

Probab=97.98  E-value=5e-06  Score=64.42  Aligned_cols=42  Identities=12%  Similarity=0.235  Sum_probs=38.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ..|..+|.+|+|||..||.++|++|.+     .++|.+|+|.+.+|-
T Consensus       237 tvPshvS~eCrdLI~sMLvRdPkkRAs-----lEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  237 TVPSHVSKECRDLIQSMLVRDPKKRAS-----LEEIVSTSWLQAGDR  278 (864)
T ss_pred             cCchhhhHHHHHHHHHHHhcCchhhcc-----HHHHhccccccCCCC
Confidence            578999999999999999999999998     599999999998874

>KOG0583|consensus

Probab=97.97  E-value=5.4e-06  Score=61.73  Aligned_cols=40  Identities=10%  Similarity=0.292  Sum_probs=37.0

Q ss_pred             CCCCCCC-CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           1 MDDKRFV-GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         1 ~~~p~~~-s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +.+|.++ |++|++||++||..+|.+|++     +.+|+.|+||+.
T Consensus       240 ~~~p~~~~S~~~~~Li~~mL~~~P~~R~t-----~~~i~~h~w~~~  280 (370)
T KOG0583|consen  240 FKIPSYLLSPEARSLIEKMLVPDPSTRIT-----LLEILEHPWFQK  280 (370)
T ss_pred             ccCCCCcCCHHHHHHHHHHcCCCcccCCC-----HHHHhhChhhcc
Confidence            3588899 999999999999999999998     499999999995

>KOG0585|consensus

Probab=97.96  E-value=5.3e-06  Score=63.27  Aligned_cols=39  Identities=26%  Similarity=0.367  Sum_probs=34.8

Q ss_pred             CCCCCC--CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           1 MDDKRF--VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         1 ~~~p~~--~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      |.||..  +.++++|||++||++||.+|++     +.+|+.|||-.
T Consensus       336 L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~-----l~~ik~Hpwvt  376 (576)
T KOG0585|consen  336 LEFPENPEINEDLKDLIKRLLEKDPEQRIT-----LPDIKLHPWVT  376 (576)
T ss_pred             ccCCCcccccHHHHHHHHHHhhcChhheee-----hhhheecceec
Confidence            457765  8999999999999999999998     59999999965

>KOG0603|consensus

Probab=97.95  E-value=5.2e-06  Score=64.67  Aligned_cols=34  Identities=24%  Similarity=0.555  Sum_probs=32.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ..+|.+|||||++||+.+|.+|++.     .+|..|+||
T Consensus       533 ~~vS~~AKdLl~~LL~~dP~~Rl~~-----~~i~~h~w~  566 (612)
T KOG0603|consen  533 ECVSDEAKDLLQQLLQVDPALRLGA-----DEIGAHPWF  566 (612)
T ss_pred             cccCHHHHHHHHHhccCChhhCcCh-----hhhccCcch
Confidence            6799999999999999999999985     899999999

>KOG0580|consensus

Probab=97.94  E-value=5.8e-06  Score=58.32  Aligned_cols=39  Identities=21%  Similarity=0.251  Sum_probs=36.0

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +.+|..+|.+|+|||.+||.++|.+|+.     ..+++.|||..
T Consensus       239 ~~~p~~is~~a~dlI~~ll~~~p~~r~~-----l~~v~~hpwI~  277 (281)
T KOG0580|consen  239 LKFPSTISGGAADLISRLLVKNPIERLA-----LTEVMDHPWIV  277 (281)
T ss_pred             ccCCcccChhHHHHHHHHhccCcccccc-----HHHHhhhHHHH
Confidence            4689999999999999999999999998     49999999975

>KOG0599|consensus

Probab=97.94  E-value=2.9e-06  Score=61.20  Aligned_cols=36  Identities=19%  Similarity=0.374  Sum_probs=32.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .+|.++||||++||++||.+|+++     ++.+.||||..+
T Consensus       254 dis~~~KdLIsrlLqVdp~~Rita-----ke~LaHpff~q~  289 (411)
T KOG0599|consen  254 DISATVKDLISRLLQVDPTKRITA-----KEALAHPFFIQI  289 (411)
T ss_pred             hccccHHHHHHHHHeeCchhcccH-----HHHhcChHHHHH
Confidence            489999999999999999999995     999999999743

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=97.91  E-value=1.1e-05  Score=56.48  Aligned_cols=39  Identities=18%  Similarity=0.213  Sum_probs=34.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+..+|..+++||.+||+.+|.+|+++    ++++++||||.+
T Consensus       229 ~~~~~~~~~~~li~~~l~~~p~~R~~~----~~~~l~h~~~~~  267 (267)
T PHA03390        229 FIKNVSKNANDFVQSMLKYNINYRLTN----YNEIIKHPFLKI  267 (267)
T ss_pred             cccccCHHHHHHHHHHhccChhhCCch----HHHHhcCCcccC
Confidence            345689999999999999999999974    699999999974

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=97.88  E-value=9.5e-06  Score=57.95  Aligned_cols=32  Identities=19%  Similarity=0.430  Sum_probs=29.5

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+.++++||++||+.||.+|++     ++++++||||
T Consensus       286 ~~~~~~dli~~mL~~dP~~R~t-----~~e~l~hp~f  317 (317)
T cd07868         286 PDSKAFHLLQKLLTMDPIKRIT-----SEQAMQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccCCC-----HHHHhcCCCC
Confidence            4678999999999999999998     4999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=97.87  E-value=1.2e-05  Score=57.04  Aligned_cols=37  Identities=24%  Similarity=0.408  Sum_probs=33.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      .+++++++||.+||+.+|.+|++     +.++++||||..+.
T Consensus       257 ~~~~~~~~li~~ml~~dp~~R~t-----~~eil~h~~f~~~~  293 (301)
T cd07873         257 RLDSDGAELLSKLLQFEGRKRIS-----AEEAMKHPYFHCLG  293 (301)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcC-----HHHHhcCccccccc
Confidence            47889999999999999999998     49999999998643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=97.85  E-value=1e-05  Score=57.78  Aligned_cols=36  Identities=28%  Similarity=0.558  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++.++++||++||+.||.+|++     +.+++.||||+++
T Consensus       257 ~~~~~~~~li~~~L~~dp~~R~t-----~~e~l~h~~~~~~  292 (309)
T cd07872         257 RLDTEGIELLTKFLQYESKKRIS-----AEEAMKHAYFRSL  292 (309)
T ss_pred             CCCHHHHHHHHHhccCChhhCCC-----HHHHhcChhhhhc
Confidence            47899999999999999999998     5999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PHA03209 serine/threonine kinase US3; Provisional

Probab=97.83  E-value=1.1e-05  Score=59.07  Aligned_cols=36  Identities=17%  Similarity=0.154  Sum_probs=32.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++.++.+||++||+.||.+|++     +.++++||||+.+
T Consensus       322 ~~~~~~~~li~~mL~~dP~~Rpt-----a~e~l~hp~f~~~  357 (357)
T PHA03209        322 NLPIDGEFLVHKMLTFDAAMRPS-----AEEILNYPMFAQL  357 (357)
T ss_pred             CCCchHHHHHHHHHcCCcccCcC-----HHHHhcCchhccC
Confidence            36778999999999999999998     4999999999864

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=97.81  E-value=1.6e-05  Score=55.79  Aligned_cols=33  Identities=30%  Similarity=0.462  Sum_probs=30.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||.+||+.||.+|++     +.+++.||||
T Consensus       256 ~~~~~~~~li~~~L~~dP~~R~t-----~~~~l~hp~f  288 (288)
T cd07863         256 EIEESGAQLLLEMLTFNPHKRIS-----AFRALQHPFF  288 (288)
T ss_pred             CcCHHHHHHHHHHhccCcccCCC-----HHHHhcCCCC
Confidence            47889999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0660|consensus

Probab=97.81  E-value=1.8e-05  Score=58.23  Aligned_cols=35  Identities=14%  Similarity=0.373  Sum_probs=33.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+++|.||+.+||..||.+|++     +++.+.|||++.
T Consensus       281 ~a~p~AidLlekmL~fdP~kRit-----a~eAL~hPYl~~  315 (359)
T KOG0660|consen  281 NANPLAIDLLEKMLVFDPKKRIT-----AEEALAHPYLAP  315 (359)
T ss_pred             CCCHHHHHHHHHHhccCccccCC-----HHHHhcChhhhh
Confidence            68999999999999999999999     599999999985

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=97.79  E-value=4e-05  Score=56.26  Aligned_cols=39  Identities=13%  Similarity=0.227  Sum_probs=34.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ...+.++++||.+||+.||.+|++     +.+++.||||.+..+
T Consensus       258 ~~~~~~~~~li~~mL~~dP~~R~t-----~~e~l~hp~~~~~~~  296 (372)
T cd07853         258 SQATHEAVHLLCRMLVFDPDKRIS-----AADALAHPYLDEGRL  296 (372)
T ss_pred             CCCCHHHHHHHHHhCCCChhhCcC-----HHHHhcCHhhCCCcc
Confidence            456899999999999999999998     599999999998654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0581|consensus

Probab=97.76  E-value=1.8e-05  Score=58.33  Aligned_cols=39  Identities=18%  Similarity=0.127  Sum_probs=35.2

Q ss_pred             CCCCC-CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRF-VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~-~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|.. +|++.++||..+|++||.+|.+     +.++++|||+..
T Consensus       301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s-----~~qLl~Hpfi~~  340 (364)
T KOG0581|consen  301 RLPEGEFSPEFRSFVSCCLRKDPSERPS-----AKQLLQHPFIKK  340 (364)
T ss_pred             CCCcccCCHHHHHHHHHHhcCCcccCCC-----HHHHhcCHHHhh
Confidence            35666 9999999999999999999998     599999999984

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=97.75  E-value=2.8e-05  Score=54.51  Aligned_cols=33  Identities=27%  Similarity=0.502  Sum_probs=30.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||++||..+|.+|++     +.+++.||||
T Consensus       252 ~~~~~~~~li~~~l~~~P~~R~t-----~~~il~h~~f  284 (284)
T cd07839         252 KLNSTGRDLLQNLLVCNPVQRIS-----AEEALQHPYF  284 (284)
T ss_pred             cCCHHHHHHHHHHhcCChhhcCC-----HHHHhcCCCC
Confidence            47899999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=97.74  E-value=2.9e-05  Score=56.75  Aligned_cols=33  Identities=6%  Similarity=0.262  Sum_probs=30.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+.++++||.+||+.||.+|++     +.++++||||.
T Consensus       290 ~~~~~~dll~~mL~~dP~~R~t-----~~e~L~hp~~~  322 (364)
T cd07875         290 KASQARDLLSKMLVIDASKRIS-----VDEALQHPYIN  322 (364)
T ss_pred             ccHHHHHHHHHhcCcCcccCCC-----HHHHhcCcccc
Confidence            4578999999999999999998     59999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=97.70  E-value=4e-05  Score=54.12  Aligned_cols=44  Identities=20%  Similarity=0.155  Sum_probs=38.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELL   52 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~   52 (111)
                      +..++.++.+||+++|..+|.+|++     +.+|+.||||..++|....
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~il~~~~~~~~~~~~~~  281 (292)
T cd06644         238 PSKWSMEFRDFLKTALDKHPETRPS-----AAQLLEHPFVSSVTSNRPL  281 (292)
T ss_pred             CcccCHHHHHHHHHHhcCCcccCcC-----HHHHhcCccccccccchhH
Confidence            4457889999999999999999998     5999999999999998643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=97.70  E-value=2.9e-05  Score=54.62  Aligned_cols=34  Identities=24%  Similarity=0.395  Sum_probs=31.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +.++..+++||.+||+.+|++|++     +.++++||||
T Consensus       257 ~~~~~~~~~li~~~l~~~P~~R~s-----~~~~l~hp~f  290 (290)
T cd07862         257 TDIDELGKDLLLKCLTFNPAKRIS-----AYSALSHPYF  290 (290)
T ss_pred             cCCCHHHHHHHHHHhccCchhcCC-----HHHHhcCCCC
Confidence            357889999999999999999998     4999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PHA03207 serine/threonine kinase US3; Provisional

Probab=97.70  E-value=2.8e-05  Score=57.68  Aligned_cols=40  Identities=18%  Similarity=0.062  Sum_probs=36.9

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHH
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEEL   51 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l   51 (111)
                      ++.++++||++||+.+|.+|++     +.+++.||||....|+.+
T Consensus       347 ~~~~~~~li~~ml~~dp~~Rps-----a~e~l~~p~f~~~~~~~~  386 (392)
T PHA03207        347 MHMDVEYLIAKMLTFDQEFRPS-----AQDILSLPLFTKEPINLL  386 (392)
T ss_pred             cchhHHHHHHHHhccChhhCCC-----HHHHhhCchhhccchhhh
Confidence            5778999999999999999998     499999999999998876

>PTZ00284 protein kinase; Provisional

Probab=97.70  E-value=2.3e-05  Score=59.42  Aligned_cols=33  Identities=15%  Similarity=0.268  Sum_probs=29.8

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..++|||++||+.||.+|++     +.++++||||..
T Consensus       411 ~~~~~dli~~mL~~dP~~R~t-----a~e~L~Hp~~~~  443 (467)
T PTZ00284        411 DDLLCDLIYGLLHYDRQKRLN-----ARQMTTHPYVLK  443 (467)
T ss_pred             hHHHHHHHHHhCCcChhhCCC-----HHHHhcCccccc
Confidence            456789999999999999998     599999999984

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=97.68  E-value=3.4e-05  Score=54.07  Aligned_cols=33  Identities=24%  Similarity=0.484  Sum_probs=30.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||.+||+.||.+|++     +.+++.||||
T Consensus       252 ~~~~~~~~li~~~l~~~P~~Rpt-----~~~~l~~~~f  284 (284)
T cd07860         252 PLDEDGRDLLSQMLHYDPNKRIS-----AKAALAHPFF  284 (284)
T ss_pred             cCCHHHHHHHHHhcCCCcccCCC-----HHHHhcCCCC
Confidence            47889999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=97.67  E-value=4.2e-05  Score=54.94  Aligned_cols=38  Identities=21%  Similarity=0.336  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .+++++++||.+||..+|.+|++     +.++++||||.++..
T Consensus       261 ~~~~~~~~li~~~l~~~P~~Rpt-----~~e~l~hp~f~~~~~  298 (338)
T cd07859         261 NADPLALRLLERLLAFDPKDRPT-----AEEALADPYFKGLAK  298 (338)
T ss_pred             CCChHHHHHHHHHcCcCcccCCC-----HHHHhcCchhhhcCc
Confidence            36788999999999999999998     599999999997654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=97.65  E-value=3.3e-05  Score=55.06  Aligned_cols=34  Identities=29%  Similarity=0.546  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +++++++||++||+.||.+|++     +.+++.|+||.+
T Consensus       262 ~~~~~~~li~~ml~~dp~~R~t-----~~~il~h~~f~~  295 (309)
T cd07845         262 LSEAGLRLLNFLLMYDPKKRAT-----AEEALESSYFKE  295 (309)
T ss_pred             cCHHHHHHHHHHhcCChhhCcC-----HHHHhcChhhcc
Confidence            6899999999999999999998     599999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=97.65  E-value=5.2e-05  Score=53.04  Aligned_cols=33  Identities=24%  Similarity=0.521  Sum_probs=30.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||++||+.||.+|++     +.+|++||||
T Consensus       253 ~~~~~~~~li~~~l~~dP~~Rpt-----~~~ll~~~~~  285 (285)
T cd07861         253 NLDEDGLDLLEKMLIYDPAKRIS-----AKKALNHPYF  285 (285)
T ss_pred             CCCHHHHHHHHHHhcCChhhCCC-----HHHHhcCCCC
Confidence            47899999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0607|consensus

Probab=97.63  E-value=3.2e-05  Score=56.93  Aligned_cols=39  Identities=15%  Similarity=0.271  Sum_probs=35.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .+|.+|+|||+.||.+++..|+.+     ..+.+|||+.++--+
T Consensus       332 hIS~eakdlisnLlvrda~~rlsa-----~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  332 HISSEAKDLISNLLVRDAKQRLSA-----AQVLNHPWVQRCAPE  370 (463)
T ss_pred             HhhHHHHHHHHHHHhccHHhhhhh-----hhccCCccccccchh
Confidence            499999999999999999999984     899999999986543

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.61  E-value=4.3e-05  Score=59.75  Aligned_cols=37  Identities=19%  Similarity=0.291  Sum_probs=32.6

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..+.+||++||++||.+|++     +.++++||||.+.++..
T Consensus       424 ~~~~dLi~~mL~~dP~kR~t-----a~e~L~Hpff~~~~~~~  460 (566)
T PLN03225        424 GAGWELLKSMMRFKGRQRIS-----AKAALAHPYFDREGLLG  460 (566)
T ss_pred             hHHHHHHHHHccCCcccCCC-----HHHHhCCcCcCCCCccc
Confidence            45679999999999999998     49999999999988753

>KOG0032|consensus

Probab=97.61  E-value=5.5e-05  Score=56.63  Aligned_cols=38  Identities=21%  Similarity=0.342  Sum_probs=34.0

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ...+|..|++||++||..||.+|++     +.+++.|||..+.
T Consensus       262 w~~is~~akd~i~~ll~~dp~~R~t-----a~~~L~HpWi~~~  299 (382)
T KOG0032|consen  262 WDDISESAKDFIRKLLEFDPRKRLT-----AAQALQHPWIKSI  299 (382)
T ss_pred             ccccCHHHHHHHHHhcccCcccCCC-----HHHHhcCccccCC
Confidence            3458999999999999999999998     4999999998864

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=97.61  E-value=6.7e-05  Score=54.47  Aligned_cols=37  Identities=24%  Similarity=0.297  Sum_probs=33.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.++++||++||+.+|.+|++     +.+++.|+||+.+
T Consensus       270 ~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~h~~~~~~  306 (342)
T cd07854         270 PGVNPEALDFLEQILTFNPMDRLT-----AEEALMHPYMSCY  306 (342)
T ss_pred             cCCCHHHHHHHHHHhCCCchhccC-----HHHHhCCCccccc
Confidence            357899999999999999999998     5999999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=97.59  E-value=6.2e-05  Score=53.58  Aligned_cols=32  Identities=19%  Similarity=0.377  Sum_probs=29.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+..+++||.+||+.||.+|++     +.+++.||||
T Consensus       286 ~~~~~~~ll~~~l~~dP~~R~t-----~~e~l~hp~f  317 (317)
T cd07867         286 PDSKVFLLLQKLLTMDPTKRIT-----SEQALQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccccC-----HHHHhcCCCC
Confidence            4677999999999999999998     4999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=97.58  E-value=4.6e-05  Score=53.55  Aligned_cols=41  Identities=10%  Similarity=0.082  Sum_probs=36.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHH
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEEL   51 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l   51 (111)
                      .++.++++||+++|.++|.+|++     +.+|+.||||+...|...
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rpt-----~~~i~~~~~~~~~~~~~~  278 (288)
T cd06616         238 EFSPSFVNFINLCLIKDESKRPK-----YKELLEHPFIKDYEERNV  278 (288)
T ss_pred             ccCHHHHHHHHHHccCChhhCcC-----HHHHhcChhhhchhhcch
Confidence            47889999999999999999998     599999999998776554

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=97.57  E-value=5.6e-05  Score=55.19  Aligned_cols=34  Identities=9%  Similarity=0.322  Sum_probs=31.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++++++||.+||+.||.+|++     +.+++.||||..
T Consensus       287 ~~~~~~~li~~mL~~dP~~R~t-----~~e~l~hp~~~~  320 (359)
T cd07876         287 KTSQARDLLSKMLVIDPDKRIS-----VDEALRHPYITV  320 (359)
T ss_pred             cchhHHHHHHHHhccCcccCCC-----HHHHhcCchhhh
Confidence            5688999999999999999998     599999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=97.56  E-value=0.0001  Score=50.50  Aligned_cols=40  Identities=35%  Similarity=0.587  Sum_probs=34.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+|..++.+.+++|++||..+|.+|++...  +.++++||||
T Consensus       211 ~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~--~~~l~~~~~f  250 (250)
T cd05123         211 RFPEFLSPEARDLISGLLQKDPTKRLGSGG--AEEIKAHPFF  250 (250)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHhhCCCccc--HHHHHhCCCC
Confidence            466778999999999999999999998532  4899999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=97.56  E-value=6.4e-05  Score=57.78  Aligned_cols=60  Identities=18%  Similarity=0.111  Sum_probs=43.5

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCC-------CCCCcccccCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRR-------VKPPFVPTVTDVGDVS   71 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~-------~~pp~~p~~~~~~d~~   71 (111)
                      ++.+..++|.+||+.||.+|++     +.+++.||||.....+.+....       ...|+.|.+....|+.
T Consensus       426 ~~~~~~~li~kmL~~DP~~Rps-----a~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (501)
T PHA03210        426 LPADFEYPLVKMLTFDWHLRPG-----AAELLALPLFSAEEEEEILFIHGLKSGAAHFKPIKPACRIESDTA  492 (501)
T ss_pred             CChHHHHHHHHHhccCcccCcC-----HHHHhhChhhhcCCchHHHHHHhhhccccccccCCchheeccccc
Confidence            5678889999999999999998     4999999999987776543221       1335556555444443

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=97.55  E-value=6.1e-05  Score=54.69  Aligned_cols=39  Identities=13%  Similarity=0.282  Sum_probs=34.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .++.++++||++||+.+|.+|++     +.+++.||||.++...
T Consensus       268 ~~~~~~~~li~~~l~~dP~~R~~-----~~e~l~h~~f~~~~~~  306 (342)
T cd07879         268 KASPQAVDLLEKMLELDVDKRLT-----ATEALEHPYFDSFRDA  306 (342)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcC-----HHHHhcCcchhhcccc
Confidence            46788999999999999999998     5999999999987543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0198|consensus

Probab=97.55  E-value=6.8e-05  Score=54.79  Aligned_cols=39  Identities=15%  Similarity=0.399  Sum_probs=36.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|..+|.+|+++|.++|.++|.+|.+     +.+++.|||...
T Consensus       243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpt-----a~eLL~hpf~~~  281 (313)
T KOG0198|consen  243 EIPDSLSDEAKDFLRKCFKRDPEKRPT-----AEELLEHPFLKQ  281 (313)
T ss_pred             CCCcccCHHHHHHHHHHhhcCcccCcC-----HHHHhhChhhhc
Confidence            478899999999999999999999998     599999999985

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=97.53  E-value=5.8e-05  Score=54.36  Aligned_cols=37  Identities=19%  Similarity=0.332  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      .+++++++||+++|+.||.+|+++     .++.+||||+.+.
T Consensus       278 ~~~~~~~~li~~~l~~dP~~Rpt~-----~ell~~p~f~~~~  314 (327)
T cd08227         278 TFSPHFHHFVEQCLQRNPDARPSA-----STLLNHSFFKQIK  314 (327)
T ss_pred             ccCHHHHHHHHHHHhhCchhcCCH-----HHHhcChhhhhcc
Confidence            467899999999999999999984     9999999998754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=97.52  E-value=0.00011  Score=51.14  Aligned_cols=41  Identities=22%  Similarity=0.327  Sum_probs=34.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+|..+++...+||++||..+|.+|+++. .+.+++++||||
T Consensus       240 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~-~~~~~ll~~~~~  280 (280)
T cd05581         240 SFPPNFPPDAKDLIEKLLVLDPQDRLGVN-EGYDELKAHPFF  280 (280)
T ss_pred             CCCCccCHHHHHHHHHHhcCCHhhCCCcc-cCHHHHhcCCCC
Confidence            35677899999999999999999999852 134899999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=97.51  E-value=0.00012  Score=53.34  Aligned_cols=37  Identities=14%  Similarity=0.123  Sum_probs=33.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..++.++++||++||..+|.+|++     +.+|++||||.+
T Consensus       297 ~~~~~~~l~~li~~~l~~~P~~Rpt-----~~ell~hp~~~~  333 (353)
T PLN00034        297 PATASREFRHFISCCLQREPAKRWS-----AMQLLQHPFILR  333 (353)
T ss_pred             CCccCHHHHHHHHHHccCChhhCcC-----HHHHhcCccccc
Confidence            4568899999999999999999998     599999999996

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=97.51  E-value=0.00012  Score=51.65  Aligned_cols=32  Identities=31%  Similarity=0.666  Sum_probs=30.3

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +++.+++||+++|+.+|++|++     +.+++.|+||
T Consensus       262 ~~~~~~~li~~~l~~~p~~R~t-----~~ell~~~~f  293 (293)
T cd07843         262 LSDNGFDLLNRLLTYDPAKRIS-----AEDALKHPYF  293 (293)
T ss_pred             CChHHHHHHHHHhccCccccCC-----HHHHhcCCCC
Confidence            6899999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=97.49  E-value=6.7e-05  Score=54.34  Aligned_cols=37  Identities=11%  Similarity=0.375  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.++++||++||+.+|.+|++     +.++++||||..+
T Consensus       261 ~~~~~~~~~li~~~l~~~P~~Rps-----~~ell~h~~~~~~  297 (337)
T cd07858         261 PHANPLAIDLLEKMLVFDPSKRIT-----VEEALAHPYLASL  297 (337)
T ss_pred             ccCCHHHHHHHHHHhcCChhhccC-----HHHHHcCcchhhh
Confidence            357899999999999999999998     5999999999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=97.48  E-value=0.0001  Score=51.40  Aligned_cols=33  Identities=27%  Similarity=0.543  Sum_probs=30.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||++||.++|.+|++     +.+++.||||
T Consensus       250 ~~~~~~~~li~~~l~~~P~~R~~-----~~~~l~~~~~  282 (282)
T cd07831         250 NASAEGLDLLKKLLAYDPDERIT-----AKQALRHPYF  282 (282)
T ss_pred             cccHHHHHHHHHHhccCcccccC-----HHHHhhCCCC
Confidence            46899999999999999999998     5999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=97.48  E-value=0.00011  Score=51.68  Aligned_cols=34  Identities=24%  Similarity=0.519  Sum_probs=31.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .++.++++||.+||..+|.+|++     +.+++.||||.
T Consensus       262 ~~~~~~~~~i~~~l~~~P~~R~~-----~~eil~~~~~~  295 (295)
T cd07837         262 DLSPEGLDLLQKMLRYDPAKRIS-----AKAALTHPYFD  295 (295)
T ss_pred             ccCHHHHHHHHHHccCChhhcCC-----HHHHhcCCCcC
Confidence            47899999999999999999998     59999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=97.48  E-value=0.00015  Score=51.09  Aligned_cols=40  Identities=13%  Similarity=0.096  Sum_probs=34.3

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc------CCCCCCCCh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK------QAFFRHIQW   48 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~------h~ff~~i~w   48 (111)
                      |...+...+++|.++|+.+|.+|++.     .++.+      ||+|++|+|
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~-----~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         243 PDNCPERVTDLMRMCWQFNPKMRPTF-----LEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             CCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHHHHHhhcCCCCCCCCC
Confidence            45578899999999999999999984     55543      999999999

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=97.46  E-value=9.5e-05  Score=53.53  Aligned_cols=36  Identities=11%  Similarity=0.349  Sum_probs=32.1

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.+++||++||+.||.+|++     +.+++.||||...
T Consensus       269 ~~~~~~~~li~~mL~~dp~~R~s-----~~ell~hp~~~~~  304 (343)
T cd07878         269 GANPLAIDLLEKMLVLDSDKRIS-----ASEALAHPYFSQY  304 (343)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCC-----HHHHhcCcchhcc
Confidence            35778999999999999999998     5999999999853

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=97.46  E-value=7.6e-05  Score=53.96  Aligned_cols=35  Identities=20%  Similarity=0.180  Sum_probs=32.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++.++++||++||++||++|++     +.+|+.||||..
T Consensus       272 ~~~~~l~~li~~~L~~~P~~Rpt-----~~ell~h~~~~~  306 (331)
T cd06649         272 VFTPDFQEFVNKCLIKNPAERAD-----LKMLMNHTFIKR  306 (331)
T ss_pred             cccHHHHHHHHHHccCCcccCCC-----HHHHhcChHHhh
Confidence            37889999999999999999998     599999999985

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=97.43  E-value=0.00012  Score=51.14  Aligned_cols=34  Identities=26%  Similarity=0.444  Sum_probs=30.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      ..+.++++||++||..+|.+|++     +++++.||||.
T Consensus       253 ~~~~~~~~li~~~l~~~p~~R~~-----~~~~l~h~~~~  286 (286)
T cd07832         253 DASPEALDLLKGLLVYDPSKRLS-----AAEALRHPYFT  286 (286)
T ss_pred             CccHHHHHHHHHHhccChhhCCC-----HHHHhhCcCcC
Confidence            45789999999999999999998     49999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=97.43  E-value=0.00011  Score=53.56  Aligned_cols=34  Identities=9%  Similarity=0.305  Sum_probs=30.9

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+.++++||.+||+.||.+|++     +.+++.||||..
T Consensus       283 ~~~~~~~li~~mL~~dP~~Rps-----~~ell~hp~~~~  316 (355)
T cd07874         283 KASQARDLLSKMLVIDPAKRIS-----VDEALQHPYINV  316 (355)
T ss_pred             cchHHHHHHHHHhcCCchhcCC-----HHHHhcCcchhc
Confidence            5678999999999999999998     599999999973

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PHA03211 serine/threonine kinase US3; Provisional

Probab=97.42  E-value=8.9e-05  Score=56.68  Aligned_cols=34  Identities=15%  Similarity=0.043  Sum_probs=31.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++.++++||++||+.||.+|++     +.|+++||||+.
T Consensus       427 ~~~~~~dli~~mL~~DP~~RPs-----a~elL~hp~f~~  460 (461)
T PHA03211        427 LDLDVEYLVCRALTFDGARRPS-----AAELLRLPLFQS  460 (461)
T ss_pred             ccchHHHHHHHHcccChhhCcC-----HHHHhhCcccCC
Confidence            5679999999999999999998     499999999974

>PHA03212 serine/threonine kinase US3; Provisional

Probab=97.42  E-value=7.8e-05  Score=55.55  Aligned_cols=35  Identities=20%  Similarity=0.046  Sum_probs=31.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ++.++++||.+||+.||.+|++     +.+++.||||..+
T Consensus       348 ~~~~l~~Li~~mL~~dP~~Rpt-----a~elL~hp~f~~~  382 (391)
T PHA03212        348 LPIDLEYLICKMLAFDAHHRPS-----AEALLDFAAFQDI  382 (391)
T ss_pred             hhhhHHHHHHHHhcCChhhCCC-----HHHHhcChhhccC
Confidence            4678999999999999999998     5999999999853

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=97.42  E-value=7.4e-05  Score=53.21  Aligned_cols=36  Identities=22%  Similarity=0.306  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++.++++||.+||+.+|.+|++     +.++++||||+.+
T Consensus       266 ~~~~~~~~li~~~l~~~P~~Rpt-----~~~ll~~p~~~~~  301 (314)
T cd08216         266 TFSEHFHQFVELCLQRDPESRPS-----ASQLLNHSFFKQC  301 (314)
T ss_pred             HHHHHHHHHHHHHhhcCCCcCcC-----HHHHhcCchHhhh
Confidence            46688999999999999999998     5999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=97.40  E-value=0.00016  Score=49.97  Aligned_cols=38  Identities=24%  Similarity=0.538  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.++.++|++||..+|.+|.+..   ..++++||||
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~---~~~l~~~~~~  258 (258)
T cd05578         221 YPATWSTEAIDAINKLLERDPQKRLGDN---LKDLKNHPYF  258 (258)
T ss_pred             CcccCcHHHHHHHHHHccCChhHcCCcc---HHHHhcCCCC
Confidence            5667899999999999999999999841   4899999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=97.40  E-value=0.00011  Score=53.46  Aligned_cols=37  Identities=11%  Similarity=0.294  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.+++++|.+||..+|.+|+++     .+++.||||+.+
T Consensus       268 ~~~~~~~~~li~~~l~~dP~~R~t~-----~~~l~~~~~~~~  304 (343)
T cd07880         268 PNANPLAVNVLEKMLVLDAESRITA-----AEALAHPYFEEF  304 (343)
T ss_pred             cCCChHHHHHHHHHcCCChhhCCCH-----HHHhcCccHhhh
Confidence            3578899999999999999999984     999999999964

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=97.39  E-value=0.00017  Score=50.49  Aligned_cols=40  Identities=20%  Similarity=0.119  Sum_probs=35.5

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      |..++.++.+||.++|+.+|.+|++     +.++++|+||.+...
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~~~~~~~~~  270 (280)
T cd06611         231 PSKWSSSFNDFLKSCLVKDPDDRPT-----AAELLKHPFVSDQSD  270 (280)
T ss_pred             cccCCHHHHHHHHHHhccChhhCcC-----HHHHhcChhhcccch
Confidence            4568899999999999999999998     599999999997644

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=97.39  E-value=0.00019  Score=49.41  Aligned_cols=36  Identities=14%  Similarity=0.192  Sum_probs=32.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .|..++.+.+++|.+||+.+|.+|++     +.+|+.|+||
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~vl~~~~~  256 (256)
T cd08218         221 VSSHYSYDLRNLVSQLFKRNPRDRPS-----VNSILEKNFI  256 (256)
T ss_pred             CcccCCHHHHHHHHHHhhCChhhCcC-----HHHHhhCcCC
Confidence            34568899999999999999999998     5999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=97.39  E-value=8.5e-05  Score=52.42  Aligned_cols=37  Identities=19%  Similarity=0.508  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      .++.+++++|.+||+.+|.+|++     +.+++.|+||.+++
T Consensus       255 ~~~~~~~~~i~~~l~~~P~~Rps-----~~~~l~~~~~~~~~  291 (294)
T PLN00009        255 TLEPAGVDLLSKMLRLDPSKRIT-----ARAALEHEYFKDLG  291 (294)
T ss_pred             CCChHHHHHHHHHccCChhhCcC-----HHHHhcCchHhHHh
Confidence            47899999999999999999997     59999999998653

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=97.38  E-value=0.00016  Score=50.25  Aligned_cols=36  Identities=14%  Similarity=0.228  Sum_probs=32.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.++++||+++|..+|.+|++     +.+|..||||
T Consensus       233 ~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~ll~~~~~  268 (268)
T cd06624         233 IPESLSAEAKNFILRCFEPDPDKRAS-----AHDLLQDPFL  268 (268)
T ss_pred             CCcccCHHHHHHHHHHcCCCchhCCC-----HHHHHhCCCC
Confidence            56678899999999999999999998     5999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=97.38  E-value=0.00015  Score=50.69  Aligned_cols=36  Identities=25%  Similarity=0.432  Sum_probs=32.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.++++||+++|..+|.+|++     +.+|++|+||
T Consensus       253 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~~~f  288 (288)
T cd07833         253 YPGKVSSPALDFLKACLRMDPKERLT-----CDELLQHPYF  288 (288)
T ss_pred             cCCccchHHHHHHHHHhccCchhccc-----HHHHhcCCCC
Confidence            34456899999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=97.37  E-value=0.00014  Score=52.55  Aligned_cols=36  Identities=19%  Similarity=0.375  Sum_probs=32.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.+++++|++||+.+|.+|++     +.+++.||||.+
T Consensus       264 ~~~~~~~~~li~~~l~~~P~~Rpt-----~~~~l~~~~~~~  299 (334)
T cd07855         264 PKASPEALDLLSQMLQFDPEERIT-----VEQALQHPFLAQ  299 (334)
T ss_pred             ccCCHHHHHHHHHHccCChhhCcC-----HHHHHhChhhhh
Confidence            346899999999999999999998     599999999985

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=97.36  E-value=0.00014  Score=51.39  Aligned_cols=32  Identities=25%  Similarity=0.455  Sum_probs=29.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+..+++||.+||..+|.+|++     +.+++.||||
T Consensus       279 ~~~~~~dli~~~l~~~P~~R~t-----~~e~l~h~~f  310 (310)
T cd07865         279 KDPHALDLIDKLLVLDPAKRID-----ADTALNHDFF  310 (310)
T ss_pred             CCHHHHHHHHHHhcCChhhccC-----HHHHhcCCCC
Confidence            3678899999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=97.36  E-value=0.00016  Score=51.24  Aligned_cols=33  Identities=24%  Similarity=0.532  Sum_probs=30.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ..+.++.++|.+||..+|++|++     +.+++.||||
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps-----~~eil~~~~f  316 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRIT-----AEEALEHPYF  316 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcC-----HHHHhcCCCC
Confidence            56789999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0593|consensus

Probab=97.36  E-value=8e-05  Score=54.44  Aligned_cols=35  Identities=26%  Similarity=0.479  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|.-+.||++++|+.||.+|++|     ++++.|+||.+
T Consensus       255 ~~s~~~ld~~k~cL~~dP~~R~sc-----~qll~H~yFd~  289 (396)
T KOG0593|consen  255 KISNVLLDLLKKCLKMDPDDRLSC-----EQLLHHPYFDG  289 (396)
T ss_pred             cchHHHHHHHHHHhcCCccccccH-----HHHhcChHHHH
Confidence            477899999999999999999998     99999999964

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=97.36  E-value=0.00016  Score=50.57  Aligned_cols=34  Identities=24%  Similarity=0.489  Sum_probs=31.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ..++.++.+||.+||+.+|.+|++     +.+++.|+||
T Consensus       250 ~~~~~~~~~li~~~l~~~P~~Rpt-----~~~il~~~~~  283 (283)
T cd07835         250 PNLDEDGLDLLSKMLVYDPAKRIS-----AKAALQHPYF  283 (283)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcC-----HHHHhcCCCC
Confidence            457789999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=97.36  E-value=0.00017  Score=52.42  Aligned_cols=35  Identities=11%  Similarity=0.358  Sum_probs=32.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++.++++||++||..+|.+|++     +.+|+.||||..
T Consensus       269 ~~s~~l~dli~~~l~~~P~~Rpt-----~~ell~h~~~~~  303 (343)
T cd07851         269 GANPLAIDLLEKMLVLDPDKRIT-----AAEALAHPYLAE  303 (343)
T ss_pred             cCCHHHHHHHHHhCCCChhhCCC-----HHHHhcCCCccc
Confidence            36899999999999999999998     599999999984

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=97.34  E-value=0.0002  Score=49.59  Aligned_cols=36  Identities=11%  Similarity=0.207  Sum_probs=32.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.++++||++||+.+|.+|++     +.+|++|+||
T Consensus       232 ~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~il~~~~~  267 (267)
T cd06628         232 IPSNISSEAIDFLEKTFEIDHNKRPT-----AAELLKHPFL  267 (267)
T ss_pred             CCcccCHHHHHHHHHHccCCchhCcC-----HHHHhhCCCC
Confidence            45668999999999999999999998     5999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=97.32  E-value=0.00018  Score=49.59  Aligned_cols=33  Identities=27%  Similarity=0.319  Sum_probs=30.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.+.++||.++|.++|.+|++     +.+|+.||||
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~-----~~~ll~~p~~  267 (267)
T cd06610         235 KYSKSFRKMISLCLQKDPSKRPT-----AEELLKHKFF  267 (267)
T ss_pred             cccHHHHHHHHHHcCCChhhCcC-----HHHHhhCCCC
Confidence            57889999999999999999997     5999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=97.32  E-value=0.00026  Score=49.06  Aligned_cols=36  Identities=11%  Similarity=0.158  Sum_probs=32.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .|..++.+++++|+++|..+|.+|++     +.+++.||||
T Consensus       230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~-----~~~~l~~~~~  265 (265)
T cd06631         230 LPDSFSAAAIDFVTSCLTRDQHERPS-----ALQLLRHDFL  265 (265)
T ss_pred             CCCCCCHHHHHHHHHHhcCCcccCCC-----HHHHhcCCCC
Confidence            45568899999999999999999998     4999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=97.31  E-value=0.00032  Score=48.42  Aligned_cols=36  Identities=17%  Similarity=0.203  Sum_probs=33.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.++++||++||.++|.+|++     +.++++|+||
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~ll~~~~~  263 (263)
T cd06625         228 LPSHVSPDARNFLRRTFVENAKKRPS-----AEELLRHFFV  263 (263)
T ss_pred             CCccCCHHHHHHHHHHhhcCcccCCC-----HHHHhhCCCC
Confidence            56678999999999999999999997     5999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=97.30  E-value=0.00025  Score=49.11  Aligned_cols=37  Identities=22%  Similarity=0.163  Sum_probs=33.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +|..++++++++|.++|..+|.+|+++     .++++||||+
T Consensus       232 ~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~ll~~~~~~  268 (268)
T cd06630         232 IPEHLSPGLRDVTLRCLELQPEDRPPS-----RELLKHPVFR  268 (268)
T ss_pred             CchhhCHHHHHHHHHHcCCCcccCcCH-----HHHhcCcccC
Confidence            445688999999999999999999985     9999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=97.30  E-value=0.00021  Score=49.10  Aligned_cols=34  Identities=24%  Similarity=0.171  Sum_probs=30.9

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ..++.++.++|.++|+.+|.+|++     +.+|+.|+||
T Consensus       223 ~~~~~~~~~~i~~~l~~~P~~Rps-----~~~il~~~~~  256 (256)
T cd06612         223 EKWSPEFNDFVKKCLVKDPEERPS-----AIQLLQHPFI  256 (256)
T ss_pred             hhcCHHHHHHHHHHHhcChhhCcC-----HHHHhcCCCC
Confidence            357789999999999999999998     5999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=97.29  E-value=0.00016  Score=50.48  Aligned_cols=33  Identities=30%  Similarity=0.594  Sum_probs=30.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.+++++|.++|+.+|.+|++     +.++++||||
T Consensus       252 ~~~~~~~~~i~~~l~~~p~~R~~-----~~~~l~~~~f  284 (284)
T cd07836         252 HADPLGIDLLHRLLQLNPELRIS-----AHDALQHPWF  284 (284)
T ss_pred             hcCcHHHHHHHHHhcCCcccCCC-----HHHHhcCCCC
Confidence            46889999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=97.29  E-value=5.8e-05  Score=54.41  Aligned_cols=35  Identities=23%  Similarity=0.329  Sum_probs=31.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++.++++||+++|+.+|.+|++     +.++++|+||.+
T Consensus       279 ~~~~~~~~li~~~l~~dP~~Rpt-----a~e~l~~~~~~~  313 (328)
T cd08226         279 TFSPAFQNLVELCLQQDPEKRPS-----ASSLLSHAFFKQ  313 (328)
T ss_pred             hhhHHHHHHHHHHccCCcccCCC-----HHHHhhCHHHHH
Confidence            36788999999999999999998     599999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0578|consensus

Probab=97.29  E-value=0.00018  Score=55.71  Aligned_cols=38  Identities=13%  Similarity=0.184  Sum_probs=35.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +.|..+|+..+|||.++|++|+.+|.+     +.++++||||+
T Consensus       490 k~~~klS~~~kdFL~~cL~~dv~~Ras-----A~eLL~HpFl~  527 (550)
T KOG0578|consen  490 KNPEKLSPELKDFLDRCLVVDVEQRAS-----AKELLEHPFLK  527 (550)
T ss_pred             CCccccCHHHHHHHHHHhhcchhcCCC-----HHHHhcChhhh
Confidence            457789999999999999999999998     59999999995

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=97.28  E-value=0.00028  Score=48.77  Aligned_cols=34  Identities=15%  Similarity=0.172  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++.+++++|.++|..+|.+|++     +.+++.||||..
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt-----~~~ll~~~~~~~  262 (265)
T cd06605         229 FSPDFQDFVNLCLIKDPRERPS-----YKELLEHPFIKK  262 (265)
T ss_pred             cCHHHHHHHHHHcCCCchhCcC-----HHHHhhCchhhc
Confidence            7889999999999999999998     599999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=97.28  E-value=0.00024  Score=49.65  Aligned_cols=33  Identities=24%  Similarity=0.457  Sum_probs=30.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++..+++||.++|+.+|.+|++     +.+++.||||
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rp~-----~~eil~~~~f  286 (286)
T cd07847         254 NISSPALSFLKGCLQMDPTERLS-----CEELLEHPYF  286 (286)
T ss_pred             cCCHHHHHHHHHHhcCCccccCC-----HHHHhcCCCC
Confidence            46889999999999999999998     4999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=97.26  E-value=0.00018  Score=52.20  Aligned_cols=34  Identities=24%  Similarity=0.297  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++.+.++||.+||++||.+|++     +.+++.|+||+.
T Consensus       271 ~~~~~~~li~~~L~~~P~~Rpt-----~~ell~h~~~~~  304 (333)
T cd06650         271 FGAEFQDFVNKCLIKNPAERAD-----LKQLMVHAFIKR  304 (333)
T ss_pred             cCHHHHHHHHHhccCCcccCcC-----HHHHhhCHHHhc
Confidence            6789999999999999999998     599999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=97.26  E-value=0.00025  Score=49.24  Aligned_cols=34  Identities=21%  Similarity=0.140  Sum_probs=31.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ..++.++++||.++|..+|.+|++     +.+|+.||||
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~~~~~  272 (272)
T cd06637         239 KKWSKKFQSFIESCLVKNHSQRPT-----TEQLMKHPFI  272 (272)
T ss_pred             CCcCHHHHHHHHHHcCCChhhCCC-----HHHHhhCCCC
Confidence            347889999999999999999998     5999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=97.26  E-value=0.00025  Score=49.70  Aligned_cols=37  Identities=16%  Similarity=0.093  Sum_probs=33.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      |..++.++++||++||..+|.+|++     +.++++||||..
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~il~~~~~~~  267 (282)
T cd06643         231 PSRWSSEFKDFLKKCLEKNVDARWT-----TTQLLQHPFVTV  267 (282)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcC-----HHHHhcCCCEec
Confidence            4568899999999999999999998     599999999984

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=97.26  E-value=0.00019  Score=51.47  Aligned_cols=36  Identities=11%  Similarity=0.348  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++.++.+||.++|+++|.+|++     +.+++.||||+++
T Consensus       260 ~~~~~~~~li~~~l~~~P~~Rpt-----~~~ll~~~~~~~~  295 (330)
T cd07834         260 GASPEAIDLLEKMLVFDPKKRIT-----ADEALAHPYLAQL  295 (330)
T ss_pred             cCCHHHHHHHHHHccCChhhCCC-----HHHHHhCccHHhh
Confidence            47889999999999999999998     5999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=97.25  E-value=0.00026  Score=48.96  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      |..++.++.++|.+||..+|.+|++     +.+|..||||
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~il~~~~~  260 (260)
T cd08222         226 PETYSRQLNSIMQSMLNKDPSLRPS-----AAEILRNPFI  260 (260)
T ss_pred             cchhcHHHHHHHHHHhcCChhhCcC-----HHHHhhCCCC
Confidence            4457889999999999999999998     5999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=97.25  E-value=0.0003  Score=48.40  Aligned_cols=36  Identities=19%  Similarity=0.217  Sum_probs=32.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .|..++.++.+||.+||..+|.+|++     +.+++.||||
T Consensus       222 ~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~l~~~~~  257 (257)
T cd08223         222 MPKDYSPELGELIATMLSKRPEKRPS-----VKSILRQPYI  257 (257)
T ss_pred             CccccCHHHHHHHHHHhccCcccCCC-----HHHHhcCCCC
Confidence            34568899999999999999999998     5999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=97.25  E-value=0.00025  Score=49.35  Aligned_cols=32  Identities=25%  Similarity=0.618  Sum_probs=29.9

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ++.+++++|++||..+|.+|++     +.++..||||
T Consensus       251 ~~~~~~~~i~~~l~~~P~~Rp~-----~~~~l~~p~~  282 (282)
T cd07829         251 LDPEGIDLLSKMLQYNPAKRIS-----AKEALKHPYF  282 (282)
T ss_pred             ccHHHHHHHHHhhccCcccCCC-----HHHHhhCcCC
Confidence            5789999999999999999998     5999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=97.24  E-value=0.00024  Score=50.10  Aligned_cols=35  Identities=23%  Similarity=0.466  Sum_probs=32.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+.++++||.++|..+|.+|++     +.+++.|+||++
T Consensus       253 ~~~~~~~~li~~~l~~~P~~R~s-----~~e~l~~~~~~~  287 (298)
T cd07841         253 AASDDALDLLQRLLTLNPNKRIT-----ARQALEHPYFSN  287 (298)
T ss_pred             cccHHHHHHHHHHhcCCcccCcC-----HHHHhhCccccC
Confidence            46789999999999999999998     599999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=97.23  E-value=0.00021  Score=51.63  Aligned_cols=35  Identities=17%  Similarity=0.376  Sum_probs=32.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++.++.+||.+||+.+|.+|++     +.+++.||||+.
T Consensus       263 ~~~~~~~~li~~~l~~dP~~Rpt-----~~e~l~hp~~~~  297 (336)
T cd07849         263 NADPKALDLLDKMLTFNPHKRIT-----VEEALAHPYLEQ  297 (336)
T ss_pred             ccCcHHHHHHHHHcCCChhhCcC-----HHHHhcCccccc
Confidence            46788999999999999999998     599999999984

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=97.23  E-value=0.00032  Score=49.22  Aligned_cols=38  Identities=13%  Similarity=0.079  Sum_probs=34.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +|..++.++++||+++|+.+|.+|++     +.+++.|+||..
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~l~~~~~~~~  267 (286)
T cd06622         230 LPSGYSDDAQDFVAKCLNKIPNRRPT-----YAQLLEHPWLVK  267 (286)
T ss_pred             CCcccCHHHHHHHHHHcccCcccCCC-----HHHHhcChhhhh
Confidence            45568999999999999999999998     599999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0661|consensus

Probab=97.22  E-value=0.0003  Score=53.83  Aligned_cols=34  Identities=18%  Similarity=0.325  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+.+|.+||.+||..||.+|.++     .+.++||||+.
T Consensus       263 ~s~~~~~li~~ll~WDP~kRpTA-----~~al~~pffq~  296 (538)
T KOG0661|consen  263 ASSEAASLIERLLAWDPDKRPTA-----SQALQHPFFQV  296 (538)
T ss_pred             cCHHHHHHHHHHhcCCCccCccH-----HHHhcCccccc
Confidence            89999999999999999999994     99999999983

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=97.22  E-value=0.00023  Score=51.79  Aligned_cols=33  Identities=15%  Similarity=0.390  Sum_probs=30.5

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+.++++||.+||+.||.+|++     +.+++.||||.
T Consensus       283 ~~~~~~~li~~~L~~dP~~R~t-----~~eiL~~~~~~  315 (353)
T cd07850         283 KASQARDLLSKMLVIDPEKRIS-----VDDALQHPYIN  315 (353)
T ss_pred             chhHHHHHHHHHcCCChhhCcC-----HHHHhcChhHh
Confidence            4668999999999999999998     59999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=97.21  E-value=0.0003  Score=49.23  Aligned_cols=34  Identities=26%  Similarity=0.397  Sum_probs=31.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +.++..+++||+++|..+|.+|++.     .+|+.|+||
T Consensus       253 ~~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~~~~  286 (286)
T cd07846         253 PKLSGLVLDLAKQCLRIDPDDRPSS-----SQLLHHEFF  286 (286)
T ss_pred             CCcCHHHHHHHHHHhcCCcccchhH-----HHHhcCCCC
Confidence            3578899999999999999999984     999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=97.21  E-value=0.00033  Score=49.34  Aligned_cols=36  Identities=14%  Similarity=0.015  Sum_probs=31.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +..++.++++||.++|+.+|.+|++     +.+|++||||+
T Consensus       256 ~~~~~~~l~~li~~~l~~~p~~Rps-----~~~il~~~~~~  291 (291)
T cd06639         256 PEKWCRSFNHFISQCLIKDFEARPS-----VTHLLEHPFIK  291 (291)
T ss_pred             ccccCHHHHHHHHHHhhcChhhCcC-----HHHHhcCcccC
Confidence            3456778999999999999999998     59999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=97.21  E-value=0.0003  Score=50.71  Aligned_cols=35  Identities=23%  Similarity=0.485  Sum_probs=32.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+.++++||.+||..+|.+|++     +.+++.|+||++
T Consensus       284 ~~~~~~~~li~~~l~~~P~~R~s-----~~~~l~~~~~~~  318 (335)
T PTZ00024        284 NASDDAIDLLQSLLKLNPLERIS-----AKEALKHEYFKS  318 (335)
T ss_pred             CCChHHHHHHHHHcCCCchhccC-----HHHHhcCcccCC
Confidence            45889999999999999999998     599999999985

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=97.19  E-value=0.0003  Score=48.30  Aligned_cols=31  Identities=35%  Similarity=0.536  Sum_probs=29.0

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +.++++||++||..+|++|++     +.++++||||
T Consensus       230 ~~~l~~li~~~l~~~p~~R~~-----~~~l~~~~~~  260 (260)
T PF00069_consen  230 SEELRDLIKKMLSKDPEQRPS-----AEELLKHPWF  260 (260)
T ss_dssp             HHHHHHHHHHHSSSSGGGSTT-----HHHHHTSGGG
T ss_pred             HHHHHHHHHHHccCChhHCcC-----HHHHhcCCCC
Confidence            378999999999999999998     5999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=97.19  E-value=0.00046  Score=47.41  Aligned_cols=35  Identities=14%  Similarity=0.178  Sum_probs=31.6

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +..++.+++++|+++|..+|++|++     +.+|+.||||
T Consensus       223 ~~~~~~~~~~~i~~~l~~~p~~Rpt-----~~~ll~~~~~  257 (257)
T cd08225         223 SPNFSRDLRSLISQLFKVSPRDRPS-----ITSILKRPFL  257 (257)
T ss_pred             CCCCCHHHHHHHHHHhccChhhCcC-----HHHHhhCCCC
Confidence            3457889999999999999999998     5999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0579|consensus

Probab=97.19  E-value=0.0003  Score=56.10  Aligned_cols=43  Identities=19%  Similarity=0.179  Sum_probs=38.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      -|+.||...+|+++++|.+||..|..+     .+++.||||.+++-..
T Consensus       257 qPS~Ws~~F~DfLk~cL~Knp~~Rp~a-----aqll~Hpfv~~~~SnK  299 (1187)
T KOG0579|consen  257 QPSHWSRSFSDFLKRCLVKNPRNRPPA-----AQLLKHPFVQNAPSNK  299 (1187)
T ss_pred             CcchhhhHHHHHHHHHHhcCCccCCCH-----HHHhhCcccccCCcch
Confidence            477899999999999999999999984     9999999999876543

>KOG0663|consensus

Probab=97.18  E-value=0.00032  Score=51.90  Aligned_cols=34  Identities=32%  Similarity=0.629  Sum_probs=32.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +|..+.||+++||..||.+|+++     .+.+.|.||+.
T Consensus       333 lse~g~~Lln~llt~dP~kR~tA-----~~~L~h~~F~e  366 (419)
T KOG0663|consen  333 LSEQGFDLLNKLLTYDPGKRITA-----EDGLKHEYFRE  366 (419)
T ss_pred             cchhHHHHHHHHhccCccccccH-----HHhhccccccc
Confidence            78999999999999999999994     99999999996

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=97.17  E-value=0.00047  Score=48.37  Aligned_cols=37  Identities=19%  Similarity=0.284  Sum_probs=33.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      ..+.++++||.+||+.+|.+|+.     +.+++.|+||...+
T Consensus       224 ~~~~~~~~li~~~l~~~P~~Rp~-----~~eil~~~~~~~~~  260 (279)
T cd06619         224 QFSEKFVHFITQCMRKQPKERPA-----PENLMDHPFIVQYN  260 (279)
T ss_pred             cCCHHHHHHHHHHhhCChhhCCC-----HHHHhcCccccccc
Confidence            37889999999999999999998     59999999998653

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=97.17  E-value=0.00038  Score=48.45  Aligned_cols=33  Identities=21%  Similarity=0.448  Sum_probs=30.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||.+||..+|.+|+.     +.++..||||
T Consensus       251 ~~~~~~~~~i~~~l~~~P~~Rp~-----~~~ll~~~~~  283 (283)
T cd05118         251 NASPQALDLLSQMLHYDPHKRIT-----AEQALAHPYF  283 (283)
T ss_pred             hhCHHHHHHHHHHhccCcccCcC-----HHHHhhCCCC
Confidence            47889999999999999999998     5999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=97.16  E-value=0.00034  Score=49.41  Aligned_cols=32  Identities=34%  Similarity=0.635  Sum_probs=29.5

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +++++.+||+++|..+|.+|++     +.+++.||||
T Consensus       280 ~~~~~~~~i~~~l~~~p~~R~t-----~~ell~~~~f  311 (311)
T cd07866         280 LGPEGLDLLSKLLSLDPYKRLT-----ASDALEHPYF  311 (311)
T ss_pred             CChhHHHHHHHHcccCcccCcC-----HHHHhcCCCC
Confidence            5578999999999999999998     4999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=97.15  E-value=0.00026  Score=49.44  Aligned_cols=39  Identities=15%  Similarity=0.085  Sum_probs=34.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .+|.++++||.+||..+|.+|++     +.+|+.|+||....+.
T Consensus       232 ~~~~~l~~li~~~l~~~p~~Rp~-----~~~il~~~~~~~~~~~  270 (283)
T cd06617         232 KFSPEFQDFVNKCLKKNYKERPN-----YPELLQHPFFELHLSK  270 (283)
T ss_pred             ccCHHHHHHHHHHccCChhhCcC-----HHHHhcCchhhhcccc
Confidence            47899999999999999999998     4999999999976543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.14  E-value=0.00046  Score=53.51  Aligned_cols=35  Identities=23%  Similarity=0.248  Sum_probs=30.7

Q ss_pred             CCCHHHHHHHHHhhccCc---ccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNP---ERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p---~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++..++|||.+||.+++   .+|++     +.++++||||..
T Consensus       468 ~~s~~~~dLi~~LL~~~~~~~~~RlS-----a~eaL~Hp~f~~  505 (507)
T PLN03224        468 RNKEAGWDLACKLITKRDQANRGRLS-----VGQALSHRFFLP  505 (507)
T ss_pred             ccChHHHHHHHHHhccCCCCcccCCC-----HHHHhCCCCcCC
Confidence            478999999999999876   68998     599999999963

>KOG0597|consensus

Probab=97.13  E-value=0.00028  Score=55.40  Aligned_cols=40  Identities=20%  Similarity=0.280  Sum_probs=36.5

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +.+|..+|.+.++||++||.+||.+|++-     .++..|||.++
T Consensus       217 v~~p~~~S~~f~nfl~gLL~kdP~~RltW-----~~Ll~HpF~k~  256 (808)
T KOG0597|consen  217 VKPPSTASSSFVNFLQGLLIKDPAQRLTW-----TDLLGHPFWKG  256 (808)
T ss_pred             CCCcccccHHHHHHHHHHhhcChhhcccH-----HHHhcChHHhh
Confidence            35788999999999999999999999984     89999999875

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=97.13  E-value=0.0004  Score=48.62  Aligned_cols=33  Identities=21%  Similarity=0.117  Sum_probs=30.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.+.++||+++|..+|.+|++     +.+|+.||||
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~-----~~ell~~~~~  282 (282)
T cd06636         250 KWSKKFIDFIEGCLVKNYLSRPS-----TEQLLKHPFI  282 (282)
T ss_pred             ccCHHHHHHHHHHhCCChhhCcC-----HHHHhcCCCC
Confidence            47889999999999999999998     4999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=97.13  E-value=0.0005  Score=46.82  Aligned_cols=36  Identities=19%  Similarity=0.421  Sum_probs=32.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.+.++||.++|..+|.+|.+     +.++..||||
T Consensus       225 ~~~~~~~~l~~~i~~~l~~~p~~Rp~-----~~~ll~~~~~  260 (260)
T cd06606         225 IPEHLSEEAKDFLRKCLRRDPKKRPT-----ADELLQHPFL  260 (260)
T ss_pred             CCcccCHHHHHHHHHhCcCChhhCCC-----HHHHhhCCCC
Confidence            46678999999999999999999997     5999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=97.12  E-value=0.00052  Score=46.86  Aligned_cols=36  Identities=19%  Similarity=0.193  Sum_probs=32.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.+.+++|++||..+|.+|++     +.+++.||||
T Consensus       223 ~~~~~~~~~~~~i~~~l~~~p~~Rp~-----~~~ll~~~~~  258 (258)
T cd08215         223 IPSQYSSELRNLVSSLLQKDPEERPS-----IAQILQSPFI  258 (258)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcC-----HHHHhcCCCC
Confidence            45568899999999999999999998     4999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0671|consensus

Probab=97.12  E-value=0.00026  Score=52.83  Aligned_cols=31  Identities=19%  Similarity=0.424  Sum_probs=28.3

Q ss_pred             HHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349          10 VGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus        10 ~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +.-|||++||..||++|++     +.|++.||||..
T Consensus       381 ~LfDLl~~mL~fDP~~RiT-----l~EAL~HpFF~~  411 (415)
T KOG0671|consen  381 QLFDLLRRMLEFDPARRIT-----LREALSHPFFAR  411 (415)
T ss_pred             HHHHHHHHHHccCcccccc-----HHHHhcCHHhhc
Confidence            4679999999999999999     499999999985

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=97.11  E-value=0.00054  Score=47.34  Aligned_cols=33  Identities=24%  Similarity=0.100  Sum_probs=30.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||++||..||.+|++     +.+++.|||+
T Consensus       243 ~~~~~~~~li~~~l~~dp~~Rpt-----~~~ll~~~~~  275 (275)
T cd06608         243 NWSKKFNDFISECLIKNYEQRPF-----MEELLEHPFI  275 (275)
T ss_pred             hcCHHHHHHHHHHhhcChhhCcC-----HHHHhcCCCC
Confidence            37789999999999999999998     5999999995

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=97.11  E-value=0.00053  Score=46.83  Aligned_cols=36  Identities=14%  Similarity=0.121  Sum_probs=32.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++...+++|.++|..+|++|++     +.++++|+||
T Consensus       219 ~~~~~~~~~~~~i~~~l~~~p~~R~~-----~~~~l~~~~~  254 (254)
T cd06627         219 LPEGISPELKDFLMQCFQKDPNLRPT-----AKQLLKHPWI  254 (254)
T ss_pred             CCCCCCHHHHHHHHHHHhCChhhCcC-----HHHHhcCCCC
Confidence            45678899999999999999999998     4999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=97.09  E-value=0.00038  Score=48.54  Aligned_cols=33  Identities=30%  Similarity=0.543  Sum_probs=30.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++.+||+++|+.+|.+|++     +.+++.||||
T Consensus       255 ~~~~~~~~li~~~l~~dp~~Rp~-----~~~il~~~~~  287 (287)
T cd07838         255 EICEEGLDLLKKMLTFNPHKRIS-----AFEALQHPYF  287 (287)
T ss_pred             hhhHHHHHHHHHHhccCCccCCC-----HHHHhcCcCC
Confidence            35688999999999999999998     4999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=97.07  E-value=0.00042  Score=47.70  Aligned_cols=39  Identities=15%  Similarity=0.227  Sum_probs=34.2

Q ss_pred             CCC-CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           4 KRF-VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         4 p~~-~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      +.. ++..++++|.++|..+|.+|++     +.++++|||++.++
T Consensus       224 ~~~~~~~~l~~li~~~l~~~p~~R~~-----~~~ll~~~~~~~~~  263 (264)
T cd06623         224 PAEEFSPEFRDFISACLQKDPKKRPS-----AAELLQHPFIKKAD  263 (264)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCCC-----HHHHHhCHHHHhcc
Confidence            344 7889999999999999999998     59999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0668|consensus

Probab=97.07  E-value=0.00034  Score=49.64  Aligned_cols=35  Identities=20%  Similarity=0.438  Sum_probs=32.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ++++|.|||.+||..|-..|+++     .|.+.||||..+
T Consensus       294 ~~peaiDlldklLrYDHqeRlTa-----kEam~HpyF~~~  328 (338)
T KOG0668|consen  294 VSPEAIDLLDKLLRYDHQERLTA-----KEAMAHPYFAPV  328 (338)
T ss_pred             CChHHHHHHHHHHhhccccccch-----HHHhcCchHHHH
Confidence            67999999999999999999995     999999999853

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=97.06  E-value=0.00062  Score=48.38  Aligned_cols=37  Identities=16%  Similarity=0.214  Sum_probs=33.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      |..++..+++||.+||..+|.+|.+     +.+|+.||||..
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~~~~~~  274 (297)
T cd06656         238 PERLSAVFRDFLNRCLEMDVDRRGS-----AKELLQHPFLKL  274 (297)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcC-----HHHHhcCchhcc
Confidence            4557889999999999999999988     599999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=97.06  E-value=0.00039  Score=50.59  Aligned_cols=35  Identities=14%  Similarity=0.339  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++++++||.+||+.+|.+|++     +.+++.||||..
T Consensus       271 ~~~~~~~~li~~~L~~dp~~R~t-----~~e~l~h~~f~~  305 (345)
T cd07877         271 GANPLAVDLLEKMLVLDSDKRIT-----AAQALAHAYFAQ  305 (345)
T ss_pred             CCCHHHHHHHHHHcCCChhhcCC-----HHHHhcChhhhh
Confidence            35889999999999999999998     499999999984

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=97.04  E-value=0.00075  Score=46.30  Aligned_cols=36  Identities=11%  Similarity=0.015  Sum_probs=32.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ++..++.+++++|.++|..+|.+|++     +.++.+||||
T Consensus       221 ~~~~~~~~l~~li~~~l~~~p~~Rpt-----~~~ll~~p~~  256 (256)
T cd08220         221 ISDRYSPDLRQLILSMLNLDPSKRPQ-----LSQIMAQPIC  256 (256)
T ss_pred             CCCCcCHHHHHHHHHHccCChhhCCC-----HHHHhhCCCC
Confidence            45568999999999999999999998     5999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=97.04  E-value=0.00054  Score=48.74  Aligned_cols=37  Identities=14%  Similarity=0.196  Sum_probs=33.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      |..++..+++||+++|..+|.+|++     +.+|+.|+||..
T Consensus       238 ~~~~~~~~~~li~~~l~~dp~~Rpt-----~~~il~~~~~~~  274 (296)
T cd06655         238 PEKLSPIFRDFLNRCLEMDVEKRGS-----AKELLQHPFLKL  274 (296)
T ss_pred             cccCCHHHHHHHHHHhhcChhhCCC-----HHHHhhChHhhh
Confidence            4568899999999999999999987     599999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=97.04  E-value=0.00059  Score=47.43  Aligned_cols=36  Identities=14%  Similarity=0.188  Sum_probs=30.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +|..+++.+++||+.|+ .+|.+|++     +++|++||||.
T Consensus       230 ~~~~~~~~~~~li~~~~-~~p~~Rp~-----~~eil~hp~~~  265 (266)
T cd06651         230 LPSHISEHARDFLGCIF-VEARHRPS-----AEELLRHPFAQ  265 (266)
T ss_pred             CchhcCHHHHHHHHHhc-CChhhCcC-----HHHHhcCcccc
Confidence            45668899999996665 69999998     59999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0659|consensus

Probab=97.03  E-value=0.0004  Score=49.93  Aligned_cols=35  Identities=20%  Similarity=0.447  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..|.++.||+.+||..||.+|+++     .+.++|+||..
T Consensus       252 aas~d~ldLl~~m~~ynP~~Rita-----~qaL~~~yf~~  286 (318)
T KOG0659|consen  252 AASSDALDLLSKMLTYNPKKRITA-----SQALKHPYFKS  286 (318)
T ss_pred             cccHHHHHHHHhhhccCchhcccH-----HHHhcchhhhc
Confidence            478899999999999999999996     99999999984

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=97.03  E-value=0.00066  Score=49.13  Aligned_cols=34  Identities=12%  Similarity=0.348  Sum_probs=31.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .++.+++++|+++|+.+|.+|++     +.+++.|+||.
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t-----~~ell~~~~~~  292 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRIS-----AAEALAHPYLA  292 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCC-----HHHHhcCCccc
Confidence            46889999999999999999998     59999999997

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=97.03  E-value=0.00087  Score=45.95  Aligned_cols=36  Identities=14%  Similarity=0.222  Sum_probs=32.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..+++++++||++||..+|.+|++     +.++..|||+
T Consensus       223 ~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~l~~~~~  258 (258)
T cd06632         223 IPDHLSDEAKDFILKCLQRDPSLRPT-----AAELLEHPFV  258 (258)
T ss_pred             cCCCcCHHHHHHHHHHhhcCcccCcC-----HHHHhcCCCC
Confidence            45668899999999999999999987     5999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=97.01  E-value=0.0006  Score=47.92  Aligned_cols=30  Identities=27%  Similarity=0.495  Sum_probs=28.5

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++|.+||+.+|.+|++     +.+++.|+||
T Consensus       262 ~~~~~li~~~L~~~p~~Rps-----~~e~l~~~~f  291 (291)
T cd07844         262 PHGEELALKFLQYEPKKRIS-----AAEAMKHPYF  291 (291)
T ss_pred             hhHHHHHHHHhccCcccccC-----HHHHhcCCCC
Confidence            88999999999999999998     5999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=97.01  E-value=0.00056  Score=48.15  Aligned_cols=31  Identities=19%  Similarity=0.302  Sum_probs=28.8

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +.++.+||++||..+|++|++     +.+++.||||
T Consensus       261 ~~~~~~ll~~~l~~dp~~R~t-----~~~~l~h~~~  291 (291)
T cd07870         261 PPKAEDLASQMLMMFPKDRIS-----AQDALLHPYF  291 (291)
T ss_pred             ChHHHHHHHHHhCcCcccCcC-----HHHHhcCCCC
Confidence            568999999999999999998     4999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=97.01  E-value=0.00055  Score=48.89  Aligned_cols=34  Identities=21%  Similarity=0.381  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++.++++||.+||..+|.+|++     +.+|+.||||.+
T Consensus       259 ~~~~~~~li~~~l~~~P~~Rpt-----~~~ll~~~~~~~  292 (308)
T cd06615         259 FSDEFQDFVDKCLKKNPKERAD-----LKELTKHPFIKR  292 (308)
T ss_pred             cCHHHHHHHHHHccCChhhCcC-----HHHHhcChhhhh
Confidence            6889999999999999999998     599999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=97.01  E-value=0.00056  Score=47.57  Aligned_cols=33  Identities=21%  Similarity=0.367  Sum_probs=30.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++.++++||.+||..+|.+|++     +.+|++|||+
T Consensus       240 ~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~~~~  272 (272)
T cd06629         240 NLSPVALDFLNACFTINPDNRPT-----ARELLQHPFI  272 (272)
T ss_pred             cCCHHHHHHHHHHhcCChhhCCC-----HHHHhhCCCC
Confidence            46889999999999999999998     5999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=97.00  E-value=0.00068  Score=47.85  Aligned_cols=33  Identities=21%  Similarity=0.453  Sum_probs=30.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .++..+++||.+||+.+|.+|++     +.+|+.|+||
T Consensus       270 ~~~~~~~~li~~~l~~~P~~Rp~-----~~~il~~~~~  302 (302)
T cd07864         270 FIPTPALDLLDHMLTLDPSKRCT-----AEEALNSPWL  302 (302)
T ss_pred             CCCHHHHHHHHHHccCChhhCCC-----HHHHhcCCCC
Confidence            47899999999999999999998     4999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=96.96  E-value=0.00082  Score=46.12  Aligned_cols=36  Identities=17%  Similarity=0.161  Sum_probs=32.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..++.++.+||.+||..+|.+|++     +.+|++|||.
T Consensus       230 ~~~~~~~~~~~l~~~~l~~~p~~Rp~-----~~~il~~~~~  265 (265)
T cd08217         230 IPYRYSSELNEVIKSMLNVDPDKRPS-----TEELLQLPLI  265 (265)
T ss_pred             CccccCHHHHHHHHHHccCCcccCCC-----HHHHhhCCCC
Confidence            45668899999999999999999998     5999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG1167|consensus

Probab=96.96  E-value=0.00065  Score=51.04  Aligned_cols=36  Identities=28%  Similarity=0.463  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++..|.||+.+||..||.+|+++     ++.+.||||...
T Consensus       352 ~~~~~~~dlLdk~le~np~kRitA-----EeALkHpFF~~~  387 (418)
T KOG1167|consen  352 VFPALLLDLLDKCLELNPQKRITA-----EDALKHPFFDEA  387 (418)
T ss_pred             cccHHHHHHHHHHccCChhhcccH-----HHHhcCcCCcch
Confidence            466789999999999999999984     999999999954

>KOG0665|consensus

Probab=96.95  E-value=0.00068  Score=49.79  Aligned_cols=32  Identities=16%  Similarity=0.466  Sum_probs=29.9

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +..|+||+.+||..+|++|++     ++++++|||++
T Consensus       283 ~~~ardll~~MLvi~pe~Ris-----v~daL~HPY~~  314 (369)
T KOG0665|consen  283 CSLARDLLSKMLVIDPEKRIS-----VDDALRHPYIK  314 (369)
T ss_pred             hHHHHHHHHHhhccChhhccc-----HHHHhcCCeee
Confidence            457999999999999999998     69999999998

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=96.88  E-value=0.00098  Score=46.45  Aligned_cols=35  Identities=20%  Similarity=0.264  Sum_probs=32.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ++.+..++|.++|..+|.+|++     ++++++|+||.+.
T Consensus       223 ~~~~~~~~l~~~l~~~p~~Rpt-----~~~il~~~~~~~~  257 (274)
T cd06609         223 FSKPFKDFVSLCLNKDPKERPS-----AKELLKHKFIKKA  257 (274)
T ss_pred             cCHHHHHHHHHHhhCChhhCcC-----HHHHhhChhhcCC
Confidence            7889999999999999999998     5999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=96.88  E-value=0.0014  Score=45.90  Aligned_cols=35  Identities=17%  Similarity=0.189  Sum_probs=31.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      |..++.++++||.++|+.+|.+|++     +.+|+.|+||
T Consensus       252 ~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~~~~  286 (286)
T cd06638         252 PELWSNEFNDFIRKCLTKDYEKRPT-----VSDLLQHVFI  286 (286)
T ss_pred             CCCcCHHHHHHHHHHccCCcccCCC-----HHHHhhcccC
Confidence            3446789999999999999999998     5999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=96.86  E-value=0.0013  Score=45.37  Aligned_cols=32  Identities=16%  Similarity=0.374  Sum_probs=29.6

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ++..+++||+++|+.+|.+|++.     .+|+.|||+
T Consensus       233 ~~~~~~~li~~~l~~~p~~R~~~-----~~i~~~~~~  264 (264)
T cd06626         233 LSPEGKDFLDRCLESDPKKRPTA-----SELLQHPFV  264 (264)
T ss_pred             cCHHHHHHHHHHccCCcccCCCH-----HHHhcCCCC
Confidence            48999999999999999999984     999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=96.85  E-value=0.00094  Score=47.04  Aligned_cols=35  Identities=23%  Similarity=0.231  Sum_probs=31.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      +++++++||.++|..+|.+|++     +.+|+.|+||...
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rpt-----~~eil~~~~~~~~  272 (287)
T cd06621         238 WSEEFKDFIKQCLEKDPTRRPT-----PWDMLEHPWIKAQ  272 (287)
T ss_pred             hHHHHHHHHHHHcCCCcccCCC-----HHHHHhCcccccc
Confidence            5678999999999999999998     5999999999753

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=96.84  E-value=0.0014  Score=45.76  Aligned_cols=32  Identities=22%  Similarity=0.476  Sum_probs=29.5

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      .+.++++||+++|+.+|.+|++     +.+|+.||||
T Consensus       252 ~~~~~~~li~~cl~~~p~~Rpt-----~~ei~~~~~~  283 (283)
T cd07830         252 ASPEAIDLIKDMLRWDPKKRPT-----ASQALQHPYF  283 (283)
T ss_pred             CCHHHHHHHHHhcccCcccCCC-----HHHHhhCCCC
Confidence            3688999999999999999998     5999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0666|consensus

Probab=96.83  E-value=0.00073  Score=49.79  Aligned_cols=35  Identities=20%  Similarity=0.388  Sum_probs=31.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      -++.|-+|+.+||+.||.+|+++     ++.++|+||..-
T Consensus       309 k~~~a~~LL~klL~yDP~kRIta-----~qAleh~yF~~d  343 (438)
T KOG0666|consen  309 KDPSALDLLQKLLTYDPIKRITA-----EQALEHPYFTED  343 (438)
T ss_pred             CCchHHHHHHHHhccCchhhccH-----HHHhcccccccC
Confidence            35669999999999999999996     999999999853

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=96.82  E-value=0.00099  Score=47.31  Aligned_cols=37  Identities=14%  Similarity=0.187  Sum_probs=33.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      |..++..+++||+++|..+|.+|++     +.+|+.|+||..
T Consensus       239 ~~~~~~~l~~li~~~l~~~p~~Rpt-----~~eil~~~~~~~  275 (296)
T cd06654         239 PEKLSAIFRDFLNRCLDMDVEKRGS-----AKELLQHQFLKI  275 (296)
T ss_pred             ccccCHHHHHHHHHHCcCCcccCcC-----HHHHhhChhhhc
Confidence            4568899999999999999999998     599999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=96.82  E-value=0.0014  Score=46.29  Aligned_cols=35  Identities=14%  Similarity=0.236  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++....+||+++|..+|.+|+++     .+++.|+||..
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~  274 (285)
T cd06648         240 KVSPRLRSFLDRMLVRDPAQRATA-----AELLNHPFLAK  274 (285)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCH-----HHHccCccccc
Confidence            377899999999999999999984     99999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=96.77  E-value=0.0011  Score=46.09  Aligned_cols=31  Identities=23%  Similarity=0.546  Sum_probs=29.4

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +.++.++|++||..+|.+|++     +.++..|+||
T Consensus       257 ~~~~~~~i~~~l~~~P~~Rp~-----~~~~l~~~~~  287 (287)
T cd07840         257 DPSALDLLDKLLTLDPKKRIS-----ADQALQHEYF  287 (287)
T ss_pred             CHHHHHHHHHHcCCChhhCcC-----HHHHhhCcCC
Confidence            889999999999999999998     4999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=96.70  E-value=0.0012  Score=46.33  Aligned_cols=39  Identities=21%  Similarity=0.215  Sum_probs=34.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .++.+.++||++||..+|.+|++     +.+|+.|+||....|.
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rpt-----~~~il~~~~~~~~~~~  279 (286)
T cd06614         241 KWSPEFKDFLNKCLVKDPEKRPS-----AEELLQHPFLKKACPK  279 (286)
T ss_pred             hCCHHHHHHHHHHhccChhhCcC-----HHHHhhChHhhccCch
Confidence            37889999999999999999998     5999999999986554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0669|consensus

Probab=96.70  E-value=0.0011  Score=47.77  Aligned_cols=33  Identities=21%  Similarity=0.542  Sum_probs=30.3

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +++|.||+.+||..||.+|+.+     .++.+|.||..
T Consensus       288 d~~a~dLle~ll~~DP~kR~~a-----d~alnh~~F~k  320 (376)
T KOG0669|consen  288 DDEALDLLEKLLKLDPTKRIDA-----DQALNHDFFWK  320 (376)
T ss_pred             ChhHHHHHHHHhccCcccCcch-----Hhhhchhhhhc
Confidence            5699999999999999999985     99999999973

>KOG0658|consensus

Probab=96.69  E-value=0.0012  Score=48.91  Aligned_cols=37  Identities=22%  Similarity=0.368  Sum_probs=33.6

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ...+++++.+|+.++|+.+|.+|+++     .+++.||||..
T Consensus       275 ~~~~~~d~~dll~~~L~Y~P~~R~~~-----~~~l~h~fFde  311 (364)
T KOG0658|consen  275 FKRLPPDALDLLSKLLQYSPSKRLSA-----LEALAHPFFDE  311 (364)
T ss_pred             ccCCCHHHHHHHHHHhccChhhcCCH-----HHHhcchhhHH
Confidence            35689999999999999999999984     99999999984

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=96.68  E-value=0.0018  Score=44.87  Aligned_cols=32  Identities=28%  Similarity=0.228  Sum_probs=29.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAF   42 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~f   42 (111)
                      .++..+++||+++|..+|.+|++     +.+|+.|||
T Consensus       236 ~~~~~~~~li~~~l~~~P~~R~~-----~~~ll~~~~  267 (267)
T cd06645         236 KWSNSFHHFVKMALTKNPKKRPT-----AEKLLQHPF  267 (267)
T ss_pred             CCCHHHHHHHHHHccCCchhCcC-----HHHHhcCCC
Confidence            46788999999999999999997     599999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=96.67  E-value=0.0015  Score=46.33  Aligned_cols=36  Identities=14%  Similarity=0.198  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++...++||+++|..+|.+|++     +.+|..|+||...
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rp~-----~~~il~h~~~~~~  275 (293)
T cd06647         240 KLSAIFRDFLNRCLEMDVEKRGS-----AKELLQHPFLKIA  275 (293)
T ss_pred             ccCHHHHHHHHHHccCChhhCcC-----HHHHhcCHHHhcC
Confidence            46788999999999999999987     5999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=96.66  E-value=0.0013  Score=45.86  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=32.0

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ++.++.++|.++|+.+|.+|++     +.+++.|+||+..
T Consensus       227 ~~~~~~~~i~~~l~~~p~~R~~-----~~~il~~~~~~~~  261 (277)
T cd06917         227 YSKLLREFVAACLDEEPKERLS-----AEELLKSKWIKAH  261 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcC-----HHHHhhChHhhcc
Confidence            7789999999999999999998     4999999999854

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=96.63  E-value=0.0014  Score=46.54  Aligned_cols=35  Identities=20%  Similarity=0.286  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+...+++|.+||..+|.+|++     +.+|+.|+||+.
T Consensus       243 ~~~~~~~~li~~~l~~~P~~Rpt-----~~~il~~~~~~~  277 (292)
T cd06658         243 KVSSVLRGFLDLMLVREPSQRAT-----AQELLQHPFLKL  277 (292)
T ss_pred             ccCHHHHHHHHHHccCChhHCcC-----HHHHhhChhhhc
Confidence            46888999999999999999998     599999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=96.61  E-value=0.0018  Score=46.05  Aligned_cols=35  Identities=23%  Similarity=0.283  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++.++.++|.++|..+|.+|++     +.+++.|+||..
T Consensus       241 ~~~~~l~~li~~~l~~~P~~R~~-----~~~ll~~~~~~~  275 (292)
T cd06657         241 KVSPSLKGFLDRLLVRDPAQRAT-----AAELLKHPFLAK  275 (292)
T ss_pred             cCCHHHHHHHHHHHhCCcccCcC-----HHHHhcChHHhc
Confidence            46889999999999999999998     499999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=96.59  E-value=0.0023  Score=43.34  Aligned_cols=31  Identities=35%  Similarity=0.420  Sum_probs=28.7

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAF   42 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~f   42 (111)
                      ++.+..++|++||+.+|.+|++     +.+++.|||
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~t-----~~~~l~~~~  253 (253)
T cd05122         223 WSDEFKDFLKKCLQKNPEKRPT-----AEQLLKHPF  253 (253)
T ss_pred             cCHHHHHHHHHHccCChhhCCC-----HHHHhcCCC
Confidence            4889999999999999999998     599999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=96.58  E-value=0.0022  Score=45.34  Aligned_cols=34  Identities=15%  Similarity=0.104  Sum_probs=31.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++.++++||.+||..+|.+|++     +.+|+.|+||..
T Consensus       245 ~~~~l~~li~~~l~~~p~~Rp~-----~~~il~~~~~~~  278 (296)
T cd06618         245 FSPDFCSFVDLCLTKDHRKRPK-----YRELLQHPFIRR  278 (296)
T ss_pred             CCHHHHHHHHHHccCChhhCCC-----HHHHhcChhhhc
Confidence            6889999999999999999998     499999999984

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG1027|consensus

Probab=96.57  E-value=0.0016  Score=52.74  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=28.7

Q ss_pred             HHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349          10 VGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus        10 ~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +|+|||.+||..+|..|.+     +.+|+.||||-
T Consensus       742 eA~dLI~~ml~~dP~~RPs-----a~~VL~HPlFW  771 (903)
T KOG1027|consen  742 EAKDLISRMLNPDPQLRPS-----ATDVLNHPLFW  771 (903)
T ss_pred             HHHHHHHHhcCCCcccCCC-----HHHHhCCCccC
Confidence            8999999999999999998     49999999997

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=96.56  E-value=0.002  Score=45.12  Aligned_cols=37  Identities=22%  Similarity=0.161  Sum_probs=32.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..++.++.++|.++|+.+|.+|++     +.++..|+||..
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~Rp~-----~~~~l~~~~~~~  258 (277)
T cd06641         222 EGNYSKPLKEFVEACLNKEPSFRPT-----AKELLKHKFIVR  258 (277)
T ss_pred             CcccCHHHHHHHHHHccCChhhCcC-----HHHHHhCHHHhh
Confidence            3457889999999999999999997     599999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=96.55  E-value=0.0015  Score=47.10  Aligned_cols=35  Identities=29%  Similarity=0.482  Sum_probs=32.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ++.++++||.++|+.+|.+|++     +.+++.|+|++.+
T Consensus       267 ~~~~l~~li~~~l~~~P~~Rps-----~~~il~~~~~~~~  301 (337)
T cd07852         267 ASDDALDLLKKLLVFNPNKRLT-----AEEALEHPYVAQF  301 (337)
T ss_pred             CCHHHHHHHHHhccCCcccccC-----HHHHhhChhhhhh
Confidence            6889999999999999999998     4999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=96.54  E-value=0.0025  Score=46.00  Aligned_cols=34  Identities=18%  Similarity=0.435  Sum_probs=31.1

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+.++++||.+||+.+|.+|++     +.+++.|||++.
T Consensus       264 ~~~~~~~li~~~l~~~P~~R~t-----~~~ll~~~~~~~  297 (332)
T cd07857         264 ANPLALDLLEKLLAFDPTKRIS-----VEEALEHPYLAI  297 (332)
T ss_pred             CCHHHHHHHHHHccCCcccCCC-----HHHHhcChhhhh
Confidence            5789999999999999999998     599999999963

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=96.51  E-value=0.0025  Score=45.66  Aligned_cols=37  Identities=16%  Similarity=0.111  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      .++...++||.++|+.+|.+|++     +.+++.||||+..+
T Consensus       244 ~~~~~l~~li~~~l~~~P~~Rp~-----~~~~l~~~~~~~~~  280 (313)
T cd06633         244 EWTDSFRGFVDYCLQKIPQERPA-----SAELLRHDFVRRDR  280 (313)
T ss_pred             ccCHHHHHHHHHHccCChhhCcC-----HHHHhcCcccCCCc
Confidence            36778999999999999999998     49999999998644

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0596|consensus

Probab=96.50  E-value=0.0031  Score=49.44  Aligned_cols=39  Identities=13%  Similarity=0.225  Sum_probs=32.6

Q ss_pred             CCCCCCCHH-HHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEV-GLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~-a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +||..-+.. +.++++.+|.+||.+|+++     .++++|||...
T Consensus       593 efp~~~~~~~li~~mK~CL~rdPkkR~si-----~eLLqhpFl~~  632 (677)
T KOG0596|consen  593 EFPDIPENDELIDVMKCCLARDPKKRWSI-----PELLQHPFLQI  632 (677)
T ss_pred             cccCCCCchHHHHHHHHHHhcCcccCCCc-----HHHhcCccccc
Confidence            455443333 9999999999999999996     99999999985

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=96.50  E-value=0.0019  Score=45.21  Aligned_cols=38  Identities=21%  Similarity=0.107  Sum_probs=33.1

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .++.+..+||++||+.+|.+|++     +.+++.|+||....-
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~-----~~~il~~~~~~~~~~  261 (277)
T cd06640         224 EFSKPFKEFIDACLNKDPSFRPT-----AKELLKHKFIVKNAK  261 (277)
T ss_pred             hhhHHHHHHHHHHcccCcccCcC-----HHHHHhChHhhhcch
Confidence            46788999999999999999998     599999999986443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=96.44  E-value=0.0029  Score=45.19  Aligned_cols=35  Identities=23%  Similarity=0.136  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++..+++||++||..+|.+|++     +.+++.|+|+..
T Consensus       238 ~~~~~~~~li~~cl~~~P~~Rp~-----~~~ll~~~~~~~  272 (308)
T cd06634         238 HWSEYFRNFVDSCLQKIPQDRPT-----SEVLLKHRFVLR  272 (308)
T ss_pred             cccHHHHHHHHHHhhCCcccCCC-----HHHHhhCccccc
Confidence            47889999999999999999998     599999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=96.43  E-value=0.0014  Score=45.86  Aligned_cols=38  Identities=21%  Similarity=0.145  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .++.++.++|.++|..+|.+|++     +.+|..|+||....+
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~-----~~~il~~~~~~~~~~  261 (277)
T cd06642         224 QYSKPFKEFVEACLNKDPRFRPT-----AKELLKHKFITRYTK  261 (277)
T ss_pred             ccCHHHHHHHHHHccCCcccCcC-----HHHHHHhHHHHHHhh
Confidence            46788999999999999999998     599999999986444

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=96.40  E-value=0.0042  Score=43.62  Aligned_cols=34  Identities=18%  Similarity=0.078  Sum_probs=31.0

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++.++.+||++||+.+|.+|++     +.++.+|+||..
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rpt-----~~e~~~~~~~~~  271 (284)
T cd06620         238 FPEDLRDFVDACLLKDPTERPT-----PQQLCAMPPFIQ  271 (284)
T ss_pred             cCHHHHHHHHHHhcCCcccCcC-----HHHHhcCccccc
Confidence            6789999999999999999998     599999999963

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=96.39  E-value=0.0044  Score=42.91  Aligned_cols=32  Identities=28%  Similarity=0.181  Sum_probs=29.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAF   42 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~f   42 (111)
                      .++..+++||+++|..+|.+|++     +++|+.|+|
T Consensus       236 ~~~~~~~~li~~~l~~~P~~Rp~-----~~~il~~l~  267 (267)
T cd06646         236 KWSSTFHNFVKISLTKNPKKRPT-----AERLLTHLF  267 (267)
T ss_pred             ccCHHHHHHHHHHhhCChhhCcC-----HHHHhcCCC
Confidence            47899999999999999999998     599999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=96.39  E-value=0.0042  Score=44.14  Aligned_cols=36  Identities=17%  Similarity=0.337  Sum_probs=32.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.+.+++|+++|+.+|.+|++     +.+++.|+||..
T Consensus       241 ~~~~~~l~~~i~~~l~~~P~~Rps-----~~~ll~~~~~~~  276 (297)
T cd06659         241 HKISPVLRDFLERMLTREPQERAT-----AQELLDHPFLLQ  276 (297)
T ss_pred             CCCCHHHHHHHHHHhcCCcccCcC-----HHHHhhChhhcc
Confidence            357889999999999999999998     599999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=96.35  E-value=0.0024  Score=45.48  Aligned_cols=35  Identities=20%  Similarity=0.153  Sum_probs=31.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++.++++||.++|..+|.+|++     +.+|..|+||..
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rp~-----~~~il~~~~~~~  272 (307)
T cd06607         238 DWSDYFRNFVDSCLQKIPQDRPS-----SEELLKHRFVLR  272 (307)
T ss_pred             hhCHHHHHHHHHHhcCChhhCcC-----HHHHhcChhhcc
Confidence            36789999999999999999998     599999999984

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0594|consensus

Probab=96.35  E-value=0.0028  Score=46.53  Aligned_cols=35  Identities=20%  Similarity=0.523  Sum_probs=32.0

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ++.++.+|+.+||+.+|.+|+++     ..++.|+||..+
T Consensus       274 ~~~~~~dll~~~L~y~p~~R~Sa-----~~al~h~yf~~~  308 (323)
T KOG0594|consen  274 LDPDGIELLSKLLQYDPAKRISA-----KGALTHPYFSEL  308 (323)
T ss_pred             cCccHHHHHHHHhccCcccCcCH-----HHHhcChhhccc
Confidence            45699999999999999999984     999999999976

>KOG0662|consensus

Probab=96.33  E-value=0.0029  Score=43.56  Aligned_cols=36  Identities=25%  Similarity=0.507  Sum_probs=32.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++...+||+++||.-+|..|++     +++.++||||.+.
T Consensus       254 ~lns~grdllqkll~cnp~qris-----aeaalqhpyf~d~  289 (292)
T KOG0662|consen  254 KLNSTGRDLLQKLLKCNPAQRIS-----AEAALQHPYFSDF  289 (292)
T ss_pred             hhcchhHHHHHHHhccCcccccC-----HHHHhcCcccccc
Confidence            46678899999999999999998     4999999999864

>KOG0586|consensus

Probab=96.33  E-value=0.0023  Score=50.19  Aligned_cols=38  Identities=13%  Similarity=0.149  Sum_probs=35.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+|..+|.++++||+++|..+|.+|..+     ++|+.|.|-.
T Consensus       273 rIp~~ms~dce~lLrk~lvl~Pskr~~~-----dqim~~~W~n  310 (596)
T KOG0586|consen  273 RIPFYMSCDCEDLLRKFLVLNPSKRGPC-----DQIMKDRWRN  310 (596)
T ss_pred             cccceeechhHHHHHHhhccCccccCCH-----HHhhhhcccc
Confidence            5778899999999999999999999986     9999999976

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=96.31  E-value=0.0041  Score=42.52  Aligned_cols=35  Identities=9%  Similarity=0.096  Sum_probs=30.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +..++.+++++|.+||..+|.+|++     +.++++||+.
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~l~~p~~  256 (256)
T cd08530         222 PPIYSQDLQNFIRSMLQVKPKLRPN-----CDKILASPAV  256 (256)
T ss_pred             chhhCHHHHHHHHHHcCCCcccCCC-----HHHHhcCCCC
Confidence            3457889999999999999999998     4999999973

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=96.30  E-value=0.0028  Score=43.61  Aligned_cols=32  Identities=25%  Similarity=0.266  Sum_probs=29.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAF   42 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~f   42 (111)
                      .++.++++||+++|..+|..|++     +.+|+.|+|
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~~~~  262 (262)
T cd06613         231 KWSPVFHDFIKKCLTKDPKKRPT-----ATKLLQHPF  262 (262)
T ss_pred             hhhHHHHHHHHHHcCCChhhCCC-----HHHHhcCCC
Confidence            35788999999999999999998     499999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=96.18  E-value=0.003  Score=48.66  Aligned_cols=38  Identities=16%  Similarity=0.137  Sum_probs=34.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +|..+++++++||.+||..+|.+|++     +.+++.|||++.
T Consensus       265 ~~~~~~~~l~~li~~~L~~dP~~RPs-----~~ell~~p~~~~  302 (496)
T PTZ00283        265 LPPSISPEMQEIVTALLSSDPKRRPS-----SSKLLNMPICKL  302 (496)
T ss_pred             CCCCCCHHHHHHHHHHcccChhhCcC-----HHHHHhCHHHHH
Confidence            46778999999999999999999998     499999999874

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=96.17  E-value=0.006  Score=42.27  Aligned_cols=36  Identities=14%  Similarity=0.211  Sum_probs=31.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .|..++..++++|+++|. +|.+|++     +++|+.|+|++
T Consensus       230 ~~~~~~~~~~~~i~~~l~-~p~~Rp~-----~~~il~~~~~~  265 (265)
T cd06652         230 LPPHVSDHCRDFLKRIFV-EAKLRPS-----ADELLRHTFVH  265 (265)
T ss_pred             CchhhCHHHHHHHHHHhc-ChhhCCC-----HHHHhcCcccC
Confidence            456688899999999995 8999998     59999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=96.15  E-value=0.0057  Score=41.88  Aligned_cols=35  Identities=9%  Similarity=0.061  Sum_probs=30.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +..++.+++++|.++|+.+|++|++     +.++..|||.
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~Rp~-----~~~ll~~~~~  256 (256)
T cd08529         222 SQMYSQQLAQLIDQCLTKDYRQRPD-----TFQLLRNPSL  256 (256)
T ss_pred             ccccCHHHHHHHHHHccCCcccCcC-----HHHHhhCCCC
Confidence            3457889999999999999999998     4999999984

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0667|consensus

Probab=96.03  E-value=0.0052  Score=48.34  Aligned_cols=33  Identities=15%  Similarity=0.278  Sum_probs=29.8

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ....|||++||..||.+|++.     .+.++|||+.+.
T Consensus       476 ~~F~dflk~~L~~dP~~R~tp-----~qal~Hpfl~~~  508 (586)
T KOG0667|consen  476 KLFIDFLKRCLEWDPAERITP-----AQALNHPFLTGT  508 (586)
T ss_pred             HHHHHHHHHHhccCchhcCCH-----HHHhcCcccccc
Confidence            466999999999999999995     899999999963

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=96.03  E-value=0.0095  Score=40.91  Aligned_cols=34  Identities=24%  Similarity=0.365  Sum_probs=30.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ..++.+.+++|.++|..+|.+|++     +.++++|+|+
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~R~s-----~~~ll~~~~l  256 (256)
T cd08221         223 SVYSSELISLVHSLLQQDPEKRPT-----ADEVLDQPLL  256 (256)
T ss_pred             cccCHHHHHHHHHHcccCcccCCC-----HHHHhhCcCC
Confidence            447899999999999999999987     5999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=96.00  E-value=0.0068  Score=40.60  Aligned_cols=32  Identities=34%  Similarity=0.612  Sum_probs=29.9

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ++.+..++|.++|..+|.+|++     +.++++||||
T Consensus       213 ~~~~~~~~i~~~l~~~p~~Rp~-----~~~~~~~~~~  244 (244)
T smart00220      213 ISPEAKDLIRKLLVKDPEKRLT-----AEEALQHPFF  244 (244)
T ss_pred             CCHHHHHHHHHHccCCchhccC-----HHHHhhCCCC
Confidence            7889999999999999999997     5999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0582|consensus

Probab=95.95  E-value=0.0044  Score=47.40  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=31.8

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      +++..+.+|..+|++||.+|.++     .++++|+||+..
T Consensus       265 ~~ksf~e~i~~CL~kDP~kRptA-----skLlkh~FFk~~  299 (516)
T KOG0582|consen  265 FSKSFREMIALCLVKDPSKRPTA-----SKLLKHAFFKKA  299 (516)
T ss_pred             hcHHHHHHHHHHhhcCcccCCCH-----HHHhccHHHhhc
Confidence            67788999999999999999985     999999999864

>KOG0670|consensus

Probab=95.94  E-value=0.0057  Score=47.91  Aligned_cols=32  Identities=19%  Similarity=0.331  Sum_probs=29.2

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ...++||.++|..||++|+++     .+.+.||||.+
T Consensus       720 ~~~rdLLdkml~LdP~KRit~-----nqAL~HpFi~~  751 (752)
T KOG0670|consen  720 QQLRDLLDKMLILDPEKRITV-----NQALKHPFITE  751 (752)
T ss_pred             HHHHHHHHHHhccChhhcCCH-----HHHhcCCcccC
Confidence            578999999999999999995     99999999974

>KOG4236|consensus

Probab=95.93  E-value=0.0038  Score=49.09  Aligned_cols=52  Identities=12%  Similarity=0.332  Sum_probs=40.9

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC-ChhHHhc--CCCCCCcc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI-QWEELLH--RRVKPPFV   61 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i-~w~~l~~--~~~~pp~~   61 (111)
                      +.+|.+|.|||.+||++.-.+|.+     ++..+.|||.++. -|..|..  .++.+-|+
T Consensus       789 ~eis~~AidlIn~LLqVkm~kRys-----vdk~lsh~Wlq~yq~w~DLRelE~~igeRyi  843 (888)
T KOG4236|consen  789 SEISPEAIDLINNLLQVKMRKRYS-----VDKSLSHPWLQDYQTWLDLRELEVRIGERYI  843 (888)
T ss_pred             hhcCHHHHHHHHHHHHHHHHHhcc-----hHhhccchhhhcchHHHHHHHHHHhhCccee
Confidence            349999999999999999999998     5999999999974 5766532  33444454

>KOG0600|consensus

Probab=95.92  E-value=0.007  Score=46.89  Aligned_cols=34  Identities=21%  Similarity=0.340  Sum_probs=31.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .++..|.+||.+||..||.+|.+     +.+.+.|.||.
T Consensus       371 ~~~~~~l~Ll~~lL~ldP~kR~t-----A~~aL~seyF~  404 (560)
T KOG0600|consen  371 DFPASALDLLEKLLSLDPDKRGT-----ASSALQSEYFT  404 (560)
T ss_pred             cCCHHHHHHHHHHhccCcccccc-----HHHHhcCcccc
Confidence            58999999999999999999998     49999999994

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=95.80  E-value=0.0046  Score=47.24  Aligned_cols=38  Identities=21%  Similarity=0.147  Sum_probs=33.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +|..++.++++||.+||..+|.+|++.     .+++.|+|++.
T Consensus       291 ~~~~~s~~~~~li~~~L~~dP~~Rps~-----~~~l~~~~~~~  328 (478)
T PTZ00267        291 FPCPVSSGMKALLDPLLSKNPALRPTT-----QQLLHTEFLKY  328 (478)
T ss_pred             CCccCCHHHHHHHHHHhccChhhCcCH-----HHHHhCHHHHH
Confidence            456789999999999999999999984     99999999864

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=95.75  E-value=0.0075  Score=43.21  Aligned_cols=35  Identities=20%  Similarity=0.144  Sum_probs=31.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++..+++||.+||+.+|.+|++     +.+|+.|+|+..
T Consensus       248 ~~~~~l~~li~~~l~~~p~~Rpt-----~~~il~~~~~~~  282 (317)
T cd06635         248 EWSDYFRNFVDSCLQKIPQDRPT-----SEELLKHMFVLR  282 (317)
T ss_pred             cccHHHHHHHHHHccCCcccCcC-----HHHHHhChhhhc
Confidence            47889999999999999999998     599999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0201|consensus

Probab=95.55  E-value=0.0071  Score=46.02  Aligned_cols=35  Identities=26%  Similarity=0.244  Sum_probs=32.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|+..++||..+|.+||+.|+++     .++++|+|.+.
T Consensus       234 ~~S~~~kEFV~~CL~k~P~~RpsA-----~~LLKh~FIk~  268 (467)
T KOG0201|consen  234 DFSPPFKEFVEACLDKNPEFRPSA-----KELLKHKFIKR  268 (467)
T ss_pred             ccCHHHHHHHHHHhhcCcccCcCH-----HHHhhhHHHHh
Confidence            589999999999999999999984     99999999885

>KOG0574|consensus

Probab=95.11  E-value=0.0063  Score=44.91  Aligned_cols=37  Identities=19%  Similarity=0.135  Sum_probs=33.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      |..||.+.-|+|+++|.++|++|.+     +.++.+|+|.++
T Consensus       252 PE~WS~~F~DFi~~CLiK~PE~R~T-----A~~L~~H~Fikn  288 (502)
T KOG0574|consen  252 PEEWSSEFNDFIRSCLIKKPEERKT-----ALRLCEHTFIKN  288 (502)
T ss_pred             hHhhhhHHHHHHHHHhcCCHHHHHH-----HHHHhhhhhhcC
Confidence            4569999999999999999999998     489999999984

>KOG1290|consensus

Probab=94.86  E-value=0.017  Score=44.87  Aligned_cols=39  Identities=13%  Similarity=0.123  Sum_probs=32.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ||..-..+..|+|.-+|+.+|++|.++     .+.++|||+..+
T Consensus       518 ~s~e~A~~fsdFL~PmLef~PeKR~tA-----~~cl~hPwLn~~  556 (590)
T KOG1290|consen  518 WSEEDAQQFSDFLSPMLEFDPEKRPTA-----AQCLKHPWLNPV  556 (590)
T ss_pred             CCHHHHHHHHHHHHHHHhcCccccccH-----HHHhcCccccCC
Confidence            444455678899999999999999984     899999999864

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=94.76  E-value=0.035  Score=38.40  Aligned_cols=34  Identities=18%  Similarity=0.174  Sum_probs=30.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAF   42 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~f   42 (111)
                      +|..++++++++|+++|+ ++.+|++.     .+++.|||
T Consensus       230 ~p~~~~~~~~~~i~~~l~-~~~~r~~~-----~~~~~~~~  263 (264)
T cd06653         230 LPDGVSDACRDFLKQIFV-EEKRRPTA-----EFLLRHPF  263 (264)
T ss_pred             CCcccCHHHHHHHHHHhc-CcccCccH-----HHHhcCCC
Confidence            577899999999999998 67999984     89999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG4645|consensus

Probab=94.75  E-value=0.018  Score=49.14  Aligned_cols=38  Identities=18%  Similarity=0.248  Sum_probs=34.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+|..+|.+++|+|..+|+.||++|+.     +.+|+.|.|-.
T Consensus      1461 q~P~~ls~~g~dFle~Cl~~dP~~Rw~-----~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1461 QIPERLSSEGRDFLEHCLEQDPKMRWT-----ASQLLEHAFGK 1498 (1509)
T ss_pred             CCchhhhHhHHHHHHHHHhcCchhhhH-----HHHHHHhhccc
Confidence            478889999999999999999999987     47999999876

>KOG0590|consensus

Probab=94.47  E-value=0.026  Score=44.84  Aligned_cols=37  Identities=16%  Similarity=0.317  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      .++.+.+.+|.++|+.+|.+|++     +++|++-+||+.|+
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~t-----i~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRIT-----IEQILNDEWIRSIE  592 (601)
T ss_pred             hchhhHHHHHHHHccCChhheec-----HHHHhhChHhhhcc
Confidence            47889999999999999999998     59999999999764

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=94.39  E-value=0.052  Score=37.22  Aligned_cols=32  Identities=16%  Similarity=0.130  Sum_probs=27.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++++||++||.++|.+|++     +.+|++
T Consensus       220 ~~~~~~~~~~~li~~~l~~~P~~Rp~-----~~~il~  251 (255)
T cd08219         220 LPSHYSYELRSLIKQMFKRNPRSRPS-----ATTILS  251 (255)
T ss_pred             CCcccCHHHHHHHHHHHhCCcccCCC-----HHHHhh
Confidence            45568899999999999999999998     477764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0983|consensus

Probab=94.37  E-value=0.054  Score=39.62  Aligned_cols=35  Identities=14%  Similarity=0.094  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|++.++|+..+|++|+.+|...     .++++|||...
T Consensus       320 gFSp~F~~fv~~CL~kd~r~RP~Y-----~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  320 GFSPDFQSFVKDCLTKDHRKRPKY-----NKLLEHPFIKR  354 (391)
T ss_pred             CcCHHHHHHHHHHhhcCcccCcch-----HHHhcCcceee
Confidence            489999999999999999999985     99999999974

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=94.25  E-value=0.017  Score=37.62  Aligned_cols=30  Identities=10%  Similarity=-0.021  Sum_probs=27.3

Q ss_pred             HHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349          10 VGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus        10 ~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +++++|+++|..+|.+|.+.     .+++.|+|..
T Consensus       140 ~~~~~i~~cl~~~p~~Rp~~-----~~ll~~~~~~  169 (176)
T smart00750      140 SFADFMRVCASRLPQRREAA-----NHYLAHCRAL  169 (176)
T ss_pred             hHHHHHHHHHhcccccccCH-----HHHHHHHHHH
Confidence            69999999999999999984     9999998865

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=94.05  E-value=0.065  Score=36.47  Aligned_cols=33  Identities=12%  Similarity=0.140  Sum_probs=28.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.+..++|.++|+.+|.+|++     +.++.+|
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~l~~~  260 (262)
T cd00192         228 KPEYCPDELYELMLSCWQLDPEDRPT-----FSELVER  260 (262)
T ss_pred             CCccCChHHHHHHHHHccCCcccCcC-----HHHHHHh
Confidence            46678999999999999999999998     4777654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=93.98  E-value=0.067  Score=37.34  Aligned_cols=33  Identities=9%  Similarity=0.038  Sum_probs=28.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      +|..++....++|.++|+.+|..|++.     .++++|
T Consensus       242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~-----~~vl~~  274 (277)
T cd05036         242 PPKGCPGPVYRIMTDCWQHTPEDRPNF-----ATILER  274 (277)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHHH
Confidence            466788999999999999999999984     777765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=93.76  E-value=0.076  Score=36.57  Aligned_cols=28  Identities=11%  Similarity=-0.081  Sum_probs=24.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      .+|..++.++++||+++|+.+|.+|++.
T Consensus       218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~  245 (257)
T cd05116         218 ECPQRCPPEMYDLMKLCWTYGVDERPGF  245 (257)
T ss_pred             CCCCCCCHHHHHHHHHHhccCchhCcCH
Confidence            3566789999999999999999999984

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=93.64  E-value=0.041  Score=46.16  Aligned_cols=38  Identities=13%  Similarity=-0.059  Sum_probs=33.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ..+.++.+||..||..+|.+|++     +.+++.|+|+..+..
T Consensus       266 ~~S~eL~dLI~~~L~~dPeeRPS-----a~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        266 GKSKELNILIKNLLNLSAKERPS-----ALQCLGYQIIKNVGP  303 (1021)
T ss_pred             CCCHHHHHHHHHHhcCChhHCcC-----HHHHhccHHHhhcCC
Confidence            46899999999999999999998     499999999986643

>PHA02988 hypothetical protein; Provisional

Probab=93.27  E-value=0.12  Score=36.57  Aligned_cols=31  Identities=3%  Similarity=-0.264  Sum_probs=26.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|...+.++++||.++|+.+|.+|++.     .+|.
T Consensus       243 ~~~~~~~~l~~li~~cl~~dp~~Rps~-----~ell  273 (283)
T PHA02988        243 LPLDCPLEIKCIVEACTSHDSIKRPNI-----KEIL  273 (283)
T ss_pred             CCCcCcHHHHHHHHHHhcCCcccCcCH-----HHHH
Confidence            455688999999999999999999974     6664

>PLN00181 protein SPA1-RELATED; Provisional

Probab=93.17  E-value=0.069  Score=43.41  Aligned_cols=33  Identities=15%  Similarity=0.106  Sum_probs=29.2

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.+++.+||..+|.+|++.     .+|+.||||..
T Consensus       238 ~~~~~~~~~~~L~~~P~~Rps~-----~eil~h~~~~~  270 (793)
T PLN00181        238 WPKEASFCLWLLHPEPSCRPSM-----SELLQSEFINE  270 (793)
T ss_pred             CHHHHHHHHHhCCCChhhCcCh-----HHHhhchhhhh
Confidence            4567899999999999999984     99999999975

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=92.99  E-value=0.12  Score=35.56  Aligned_cols=32  Identities=6%  Similarity=-0.119  Sum_probs=26.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +|...+.+..+||+++|+.+|.+|++     +++|.+
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~  255 (258)
T cd05078         224 LPAPKWTELANLINQCMDYEPDFRPS-----FRAIIR  255 (258)
T ss_pred             CCCCCcHHHHHHHHHHhccChhhCCC-----HHHHHH
Confidence            55667789999999999999999998     477654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=92.95  E-value=0.11  Score=35.87  Aligned_cols=32  Identities=9%  Similarity=0.041  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++.++|.++|..+|.+|++     +.+++.
T Consensus       236 ~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~e~~~  267 (273)
T cd05035         236 QPEDCLDELYDLMYSCWRADPKDRPT-----FTKLRE  267 (273)
T ss_pred             CCcCCCHHHHHHHHHHcCCChhhCcC-----HHHHHH
Confidence            45668899999999999999999997     477664

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=92.92  E-value=0.15  Score=35.22  Aligned_cols=27  Identities=15%  Similarity=-0.029  Sum_probs=24.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      .|..++.++++||.++|+.+|.+|++.
T Consensus       226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~  252 (263)
T cd05052         226 RPEGCPPKVYELMRACWQWNPSDRPSF  252 (263)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCCCH
Confidence            456788999999999999999999984

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=92.91  E-value=0.13  Score=35.44  Aligned_cols=31  Identities=6%  Similarity=0.069  Sum_probs=26.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .+..++.++++||.++|..+|.+|++.     .+|+
T Consensus       234 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i~  264 (269)
T cd05044         234 KPENCPDKIYQLMTNCWAQDPSERPTF-----DRIQ  264 (269)
T ss_pred             CcccchHHHHHHHHHHcCCCcccCCCH-----HHHH
Confidence            455688999999999999999999984     6665

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=92.63  E-value=0.15  Score=34.94  Aligned_cols=31  Identities=10%  Similarity=0.068  Sum_probs=25.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|...+..+++||+++|+.+|.+|++.     .++.
T Consensus       217 ~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~~~  247 (252)
T cd05084         217 CPELCPDAVYRLMERCWEYDPGQRPSF-----STVH  247 (252)
T ss_pred             CcccCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            345678999999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=92.20  E-value=0.18  Score=34.97  Aligned_cols=30  Identities=13%  Similarity=0.264  Sum_probs=25.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |..++.+.++||.++|..+|.+|++.     .+|+
T Consensus       246 ~~~~~~~~~~li~~~l~~~p~~Rp~~-----~eil  275 (280)
T cd05049         246 PRTCPSEVYDIMLGCWKRDPQQRINI-----KDIH  275 (280)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCH-----HHHH
Confidence            45688999999999999999999984     6765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=92.19  E-value=0.17  Score=34.95  Aligned_cols=32  Identities=13%  Similarity=-0.056  Sum_probs=26.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+..++...+++|.++|+.+|.+|++     +.+|.+
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~l~~  266 (272)
T cd05075         235 QPPDCLDGLYSLMSSCWLLNPKDRPS-----FETLRC  266 (272)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcC-----HHHHHH
Confidence            35568889999999999999999987     477653

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=92.14  E-value=0.2  Score=34.36  Aligned_cols=31  Identities=10%  Similarity=0.054  Sum_probs=25.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++.+||.++|..+|.+|++.     .+++
T Consensus       220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~  250 (256)
T cd05039         220 APEGCPPEVYKVMKDCWELDPAKRPTF-----KQLR  250 (256)
T ss_pred             CccCCCHHHHHHHHHHhccChhhCcCH-----HHHH
Confidence            345578999999999999999999984     6665

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=92.02  E-value=0.16  Score=35.34  Aligned_cols=33  Identities=15%  Similarity=0.029  Sum_probs=27.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.+..+|++++|..+|.+|++     +.+|.+|
T Consensus       247 ~~~~~~~~~~~l~~~c~~~~p~~Rp~-----~~~i~~~  279 (283)
T cd05048         247 CPEDCPARVYALMIECWNEIPARRPR-----FKDIHTR  279 (283)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCcC-----HHHHHHH
Confidence            35568899999999999999999998     4777653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=91.97  E-value=0.22  Score=34.28  Aligned_cols=27  Identities=19%  Similarity=-0.027  Sum_probs=23.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      .|...+..+++||.++|.++|.+|++.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~  250 (260)
T cd05070         224 CPQDCPISLHELMLQCWKKDPEERPTF  250 (260)
T ss_pred             CCCcCCHHHHHHHHHHcccCcccCcCH
Confidence            345678999999999999999999984

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=91.93  E-value=0.2  Score=34.97  Aligned_cols=33  Identities=15%  Similarity=0.094  Sum_probs=27.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.+++++|.++|+.+|.+|++.     .+|.++
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~i~~~  279 (283)
T cd05090         247 CSEDCPPRMYSLMTECWQEGPSRRPRF-----KDIHTR  279 (283)
T ss_pred             CCCCCCHHHHHHHHHHcccCcccCcCH-----HHHHHH
Confidence            355688999999999999999999984     666543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=91.89  E-value=0.15  Score=35.66  Aligned_cols=31  Identities=10%  Similarity=0.056  Sum_probs=26.1

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +..++.++.+||.++|+.+|.+|++.     .+|..
T Consensus       248 ~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~  278 (284)
T cd05079         248 PPNCPEEVYQLMRKCWEFQPSKRTTF-----QNLIE  278 (284)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCH-----HHHHH
Confidence            44578999999999999999999984     66653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=91.87  E-value=0.24  Score=33.70  Aligned_cols=31  Identities=10%  Similarity=0.022  Sum_probs=26.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++.+||.++|..+|.+|++.     .++.
T Consensus       215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~  245 (250)
T cd05085         215 CPQKCPDDVYKVMQRCWDYKPENRPKF-----SELQ  245 (250)
T ss_pred             CCCCCCHHHHHHHHHHcccCcccCCCH-----HHHH
Confidence            455688999999999999999999874     6664

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=91.83  E-value=0.22  Score=33.99  Aligned_cols=31  Identities=13%  Similarity=0.085  Sum_probs=26.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.+.++||.++|+.+|.+|++.     .+++
T Consensus       216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~ell  246 (251)
T cd05041         216 APQLCPEEIYRLMLQCWAYDPENRPSF-----SEIY  246 (251)
T ss_pred             CCccCCHHHHHHHHHHhccChhhCcCH-----HHHH
Confidence            345678999999999999999999974     6665

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=91.75  E-value=0.24  Score=34.11  Aligned_cols=27  Identities=22%  Similarity=0.041  Sum_probs=23.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +|..++..+++||+++|.++|.+|++.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~  250 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERPTF  250 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCH
Confidence            345688999999999999999999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=91.64  E-value=0.2  Score=35.04  Aligned_cols=30  Identities=13%  Similarity=0.197  Sum_probs=25.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |..++....+||.++|+++|.+|++.     .+|.
T Consensus       246 ~~~~~~~~~~li~~cl~~~P~~Rp~~-----~~l~  275 (280)
T cd05092         246 PRTCPPEVYAIMQGCWQREPQQRMVI-----KDIH  275 (280)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCH-----HHHH
Confidence            45688999999999999999999985     6665

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG1151|consensus

Probab=91.57  E-value=0.17  Score=39.45  Aligned_cols=39  Identities=10%  Similarity=0.084  Sum_probs=33.5

Q ss_pred             CCCCCC--CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           1 MDDKRF--VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         1 ~~~p~~--~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +.||+.  +|.+|+++|+++|...-+.|+.     +.++..||||.
T Consensus       705 VqFP~KPvVsseAkaFIRRCLaYRKeDR~D-----V~qLA~dpyll  745 (775)
T KOG1151|consen  705 VQFPPKPVVSSEAKAFIRRCLAYRKEDRID-----VQQLACDPYLL  745 (775)
T ss_pred             ccCCCCCccCHHHHHHHHHHHHhhhhhhhh-----HHHHccCcccc
Confidence            357754  9999999999999988888875     68999999997

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=91.46  E-value=0.18  Score=35.30  Aligned_cols=30  Identities=17%  Similarity=0.058  Sum_probs=25.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+.++++||.++|+.+|.+|++.     .+|.
T Consensus       262 ~~~~~~~l~~li~~cl~~~p~~Rpt~-----~el~  291 (296)
T cd05051         262 PPNCPKDIYELMLECWRRDEEDRPTF-----REIH  291 (296)
T ss_pred             ccCCCHHHHHHHHHHhccChhcCCCH-----HHHH
Confidence            34567899999999999999999984     7764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=91.25  E-value=0.28  Score=33.65  Aligned_cols=27  Identities=11%  Similarity=-0.092  Sum_probs=23.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      .|..++...++||.++|..+|.+|++.
T Consensus       219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~  245 (257)
T cd05060         219 RPEECPQEIYSIMLSCWKYRPEDRPTF  245 (257)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCH
Confidence            456688999999999999999999984

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG2345|consensus

Probab=91.25  E-value=0.23  Score=35.76  Aligned_cols=33  Identities=15%  Similarity=0.130  Sum_probs=27.4

Q ss_pred             CCCCC--CCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRF--VGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~--~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+|..  .|+....||+.+|+.||.+|..     +.++++
T Consensus       261 s~P~~~~yse~l~~lik~mlqvdP~qRP~-----i~~ll~  295 (302)
T KOG2345|consen  261 SIPNSSRYSEALHQLIKSMLQVDPNQRPT-----IPELLS  295 (302)
T ss_pred             ccCCCCCccHHHHHHHHHHhcCCcccCCC-----HHHHHH
Confidence            46644  8999999999999999999998     466654

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=91.22  E-value=0.25  Score=34.21  Aligned_cols=31  Identities=16%  Similarity=0.010  Sum_probs=26.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|..++.+.++||.++|+.+|.+|++.     .+|.
T Consensus       242 ~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~l~  272 (277)
T cd05032         242 LPENCPDKLLELMRMCWQYNPKMRPTF-----LEIV  272 (277)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence            566788999999999999999999974     6665

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=91.20  E-value=0.26  Score=34.45  Aligned_cols=26  Identities=12%  Similarity=-0.148  Sum_probs=23.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      |..++.++.+||.++|+.+|.+|++.
T Consensus       254 ~~~~~~~l~~li~~~l~~~p~~Rpt~  279 (288)
T cd05050         254 PDNCPLELYNLMRLCWSKLPSDRPSF  279 (288)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCCCH
Confidence            45678999999999999999999985

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=91.19  E-value=0.25  Score=34.61  Aligned_cols=32  Identities=6%  Similarity=0.042  Sum_probs=26.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|...+.++.+||.++|..+|.+|++.     .+|..
T Consensus       255 ~~~~~~~~~~~li~~~l~~~p~~Rps~-----~eil~  286 (293)
T cd05053         255 KPQNCTQELYHLMRDCWHEVPSQRPTF-----KQLVE  286 (293)
T ss_pred             CCCCCCHHHHHHHHHHcccCcccCcCH-----HHHHH
Confidence            455678899999999999999999974     77764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=90.97  E-value=0.26  Score=33.97  Aligned_cols=31  Identities=6%  Similarity=-0.069  Sum_probs=26.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      |...+...++||.++|+.+|.+|++     +.+|.+
T Consensus       230 ~~~~~~~l~~li~~cl~~~p~~Rp~-----~~ei~~  260 (266)
T cd05033         230 PMDCPSALYQLMLDCWQKDRNERPT-----FSQIVS  260 (266)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcC-----HHHHHH
Confidence            4457899999999999999999998     477754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG4279|consensus

Probab=90.97  E-value=0.27  Score=40.39  Aligned_cols=39  Identities=13%  Similarity=0.171  Sum_probs=35.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|..+|.+|+.+|.+++..+|..|.++     .+++..||...
T Consensus       799 ~iPeelsaeak~FilrcFepd~~~R~sA-----~~LL~DpFlq~  837 (1226)
T KOG4279|consen  799 PIPEELSAEAKNFILRCFEPDPCDRPSA-----KDLLQDPFLQH  837 (1226)
T ss_pred             CCcHHHHHHHHHHHHHHcCCCcccCccH-----HHhccCccccc
Confidence            3688899999999999999999999984     99999999984

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=90.79  E-value=0.31  Score=34.19  Aligned_cols=26  Identities=15%  Similarity=0.123  Sum_probs=23.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +..++.++++||.++|+.+|.+|++.
T Consensus       244 ~~~~~~~l~~li~~~l~~~p~~Rpt~  269 (288)
T cd05093         244 PRTCPKEVYDLMLGCWQREPHMRLNI  269 (288)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCH
Confidence            45678999999999999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=90.64  E-value=0.34  Score=33.27  Aligned_cols=30  Identities=20%  Similarity=0.112  Sum_probs=25.3

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +...+.+.++||+++|..+|.+|++.     +++.
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~  254 (260)
T cd05067         225 PDNCPEELYELMRLCWKEKPEERPTF-----EYLR  254 (260)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCH-----HHHH
Confidence            45578899999999999999999984     6654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0584|consensus

Probab=90.47  E-value=0.19  Score=39.93  Aligned_cols=32  Identities=22%  Similarity=0.288  Sum_probs=29.1

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +++++.||.++|.. ...|+++     .|++.|+||..
T Consensus       270 dPevr~fIekCl~~-~~~R~sa-----~eLL~d~Ff~~  301 (632)
T KOG0584|consen  270 DPEVREFIEKCLAT-KSERLSA-----KELLKDPFFDE  301 (632)
T ss_pred             CHHHHHHHHHHhcC-chhccCH-----HHHhhChhhcc
Confidence            67999999999987 9999985     99999999985

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=90.41  E-value=0.26  Score=34.98  Aligned_cols=31  Identities=6%  Similarity=-0.034  Sum_probs=26.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||.++|..+|.+|++.     .+|.
T Consensus       263 ~~~~~~~~~~~li~~~l~~~p~~Rps~-----~evl  293 (307)
T cd05098         263 KPSNCTNELYMMMRDCWHAVPSQRPTF-----KQLV  293 (307)
T ss_pred             CCCcCCHHHHHHHHHHcccChhhCcCH-----HHHH
Confidence            456688999999999999999999974     6664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=90.38  E-value=0.35  Score=34.12  Aligned_cols=31  Identities=16%  Similarity=0.159  Sum_probs=26.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||.++|..+|.+|++.     .+|.
T Consensus       239 ~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i~  269 (297)
T cd05089         239 KPRNCDDEVYELMRQCWRDRPYERPPF-----AQIS  269 (297)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            455688999999999999999999984     7765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=90.23  E-value=0.32  Score=33.22  Aligned_cols=31  Identities=16%  Similarity=0.171  Sum_probs=25.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      |...+..+.+|+.++|..+|.+|++.     .++++
T Consensus       223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~-----~~~l~  253 (256)
T cd05112         223 PRLASQSVYELMQHCWKERPEDRPSF-----SLLLH  253 (256)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCCCH-----HHHHH
Confidence            44578899999999999999999974     77654

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=90.20  E-value=0.29  Score=34.02  Aligned_cols=32  Identities=13%  Similarity=0.075  Sum_probs=26.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|...+...+++|.++|+.+|.+|++.     .++.+
T Consensus       242 ~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~  273 (277)
T cd05062         242 KPDNCPDMLFELMRMCWQYNPKMRPSF-----LEIIS  273 (277)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            345678899999999999999999984     66654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=90.18  E-value=0.26  Score=35.03  Aligned_cols=32  Identities=9%  Similarity=0.063  Sum_probs=26.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      |..++.++.+||.++|+.+|.+|++.     .+++.+
T Consensus       245 ~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~  276 (303)
T cd05088         245 PLNCDDEVYDLMRQCWREKPYERPSF-----AQILVS  276 (303)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHHH
Confidence            44578999999999999999999984     777654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=90.12  E-value=0.36  Score=34.69  Aligned_cols=31  Identities=6%  Similarity=-0.088  Sum_probs=26.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|...+.++++||.++|..+|.+|++.     .+|.
T Consensus       298 ~~~~~~~~l~~li~~cl~~dp~~RPs~-----~el~  328 (338)
T cd05102         298 APENATPEIYRIMLACWQGDPKERPTF-----SALV  328 (338)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCH-----HHHH
Confidence            355688999999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=90.10  E-value=0.41  Score=32.86  Aligned_cols=32  Identities=9%  Similarity=0.054  Sum_probs=26.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|...+.+.++||.++|..+|.+|++     +.++..
T Consensus       222 ~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~~l~  253 (256)
T cd05059         222 RPKLAPTEVYTIMYSCWHEKPEDRPA-----FKKLLS  253 (256)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcC-----HHHHHH
Confidence            35567899999999999999999998     477653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0611|consensus

Probab=90.01  E-value=0.2  Score=38.67  Aligned_cols=32  Identities=25%  Similarity=0.260  Sum_probs=28.3

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      -+.+|.-||+.||.+||.+|.+     +.+|.+|=|.
T Consensus       275 ~PSdA~gLIRwmLmVNP~RRAT-----ieDiAsHWWv  306 (668)
T KOG0611|consen  275 TPSDASGLIRWMLMVNPERRAT-----IEDIASHWWV  306 (668)
T ss_pred             CCchHHHHHHHHHhcCcccchh-----HHHHhhhhee
Confidence            4568999999999999999998     6999999774

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=89.86  E-value=0.4  Score=33.53  Aligned_cols=33  Identities=9%  Similarity=-0.038  Sum_probs=26.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      +|...+.+.++||.++|..+|.+|++     +.+|.++
T Consensus       240 ~~~~~~~~~~~li~~cl~~~p~~Rps-----~~~il~~  272 (274)
T cd05076         240 LPEPSCKELATLISQCLTYEPTQRPS-----FRTILRD  272 (274)
T ss_pred             CCCCCChHHHHHHHHHcccChhhCcC-----HHHHHHh
Confidence            34456788999999999999999987     4777643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=89.72  E-value=0.34  Score=35.21  Aligned_cols=32  Identities=13%  Similarity=0.102  Sum_probs=26.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      |...+.++.+++.++|+.+|.+|++     +.+|.+|
T Consensus       298 ~~~~~~~~~~l~~~cl~~~p~~RPs-----~~ell~~  329 (337)
T cd05054         298 PEYATPEIYSIMLDCWHNNPEDRPT-----FSELVEI  329 (337)
T ss_pred             CccCCHHHHHHHHHHccCChhhCcC-----HHHHHHH
Confidence            4557889999999999999999998     4777654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=89.67  E-value=0.48  Score=32.48  Aligned_cols=26  Identities=15%  Similarity=-0.035  Sum_probs=23.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      |...+.+..++|.++|+.+|.+|++.
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~  251 (261)
T cd05148         226 PAKCPQEIYKIMLECWAAEPEDRPSF  251 (261)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCH
Confidence            45678999999999999999999984

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=89.60  E-value=0.39  Score=32.94  Aligned_cols=30  Identities=10%  Similarity=-0.023  Sum_probs=25.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +..+++..+++|.++|+.+|.+|++.     .++.
T Consensus       221 ~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~l~  250 (256)
T cd05082         221 PDGCPPVVYDVMKQCWHLDAATRPSF-----LQLR  250 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCH-----HHHH
Confidence            45578899999999999999999974     6664

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=89.48  E-value=0.49  Score=33.60  Aligned_cols=30  Identities=10%  Similarity=0.036  Sum_probs=25.5

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |..++.++.+||.++|..+|.+|++.     .+++
T Consensus       266 ~~~~~~~~~~li~~cl~~~p~~Rpt~-----~ell  295 (302)
T cd05055         266 PEHAPAEIYDIMKTCWDADPLKRPTF-----KQIV  295 (302)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCH-----HHHH
Confidence            34578999999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=89.45  E-value=0.33  Score=33.49  Aligned_cols=27  Identities=11%  Similarity=-0.252  Sum_probs=24.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +|...+.++++||.+++..+|.+|++.
T Consensus       219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~  245 (257)
T cd05115         219 CPAECPPEMYALMKDCWIYKWEDRPNF  245 (257)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            456678999999999999999999984

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=89.23  E-value=0.55  Score=33.46  Aligned_cols=31  Identities=10%  Similarity=-0.038  Sum_probs=25.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.+.++||.++|..+|.+|++.     .++.
T Consensus       257 ~~~~~~~~l~~li~~cl~~~p~~Rps~-----~~ll  287 (314)
T cd05099         257 KPSNCTHELYMLMRECWHAVPTQRPTF-----KQLV  287 (314)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHH
Confidence            455678899999999999999999984     6655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=89.08  E-value=0.37  Score=33.39  Aligned_cols=29  Identities=7%  Similarity=0.028  Sum_probs=24.5

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .+.++++||+++|+.+|.+|+..     .+|..+
T Consensus       232 ~~~~~~~li~~cl~~dp~~Rp~~-----~~il~~  260 (262)
T cd05077         232 SCKELADLMTHCMNYDPNQRPFF-----RAIMRD  260 (262)
T ss_pred             ChHHHHHHHHHHcCCChhhCcCH-----HHHHHh
Confidence            46789999999999999999984     777643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=89.02  E-value=0.56  Score=32.43  Aligned_cols=31  Identities=10%  Similarity=-0.033  Sum_probs=25.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +..++...+++|.++|+.+|.+|++     +.+++.
T Consensus       241 ~~~~~~~l~~~i~~~l~~~p~~Rp~-----~~~~l~  271 (275)
T cd05046         241 PEGCPSRLYKLMTRCWAVNPKDRPS-----FSELVS  271 (275)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCC-----HHHHHH
Confidence            3457889999999999999999987     477654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=88.92  E-value=0.39  Score=33.21  Aligned_cols=31  Identities=10%  Similarity=-0.017  Sum_probs=26.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.+.++||.++|..+|.+|++.     .+++
T Consensus       229 ~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~~~  259 (270)
T cd05056         229 MPPNCPPTLYSLMTKCWAYDPSKRPRF-----TELK  259 (270)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            456688999999999999999999974     6654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=88.74  E-value=0.64  Score=31.83  Aligned_cols=30  Identities=20%  Similarity=0.083  Sum_probs=25.1

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+.+.+++|.++|+.+|.+|++.     .++.
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rp~~-----~~l~  255 (261)
T cd05034         226 PPNCPEELYDLMLQCWDKDPEERPTF-----EYLQ  255 (261)
T ss_pred             CCCCCHHHHHHHHHHcccCcccCCCH-----HHHH
Confidence            44578899999999999999999974     6654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=88.69  E-value=0.43  Score=35.22  Aligned_cols=31  Identities=10%  Similarity=0.059  Sum_probs=26.0

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      |...+.++++||.++|..+|.+|++.     .+|.+
T Consensus       339 ~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~  369 (375)
T cd05104         339 PECAPSEMYDIMKSCWDADPLKRPTF-----KQIVQ  369 (375)
T ss_pred             CCCCCHHHHHHHHHHccCChhHCcCH-----HHHHH
Confidence            45578899999999999999999984     77753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=88.65  E-value=0.61  Score=32.45  Aligned_cols=30  Identities=13%  Similarity=0.024  Sum_probs=25.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..++.+..+||.++|..+|.+|++.     .+|..
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rpt~-----~ei~~  278 (284)
T cd05081         249 PGCPAEIYAIMKECWNNDPSQRPSF-----SELAL  278 (284)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCH-----HHHHH
Confidence            4578899999999999999999984     77653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=88.64  E-value=0.67  Score=31.65  Aligned_cols=30  Identities=10%  Similarity=-0.005  Sum_probs=25.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+.+..+||.++|+.+|++|++.     .+|.
T Consensus       223 ~~~~~~~~~~li~~~l~~~p~~Rps~-----~~~~  252 (257)
T cd05040         223 PEACPQDIYNVMLQCWAHNPADRPTF-----AALR  252 (257)
T ss_pred             CccCCHHHHHHHHHHCCCCcccCCCH-----HHHH
Confidence            44578899999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=88.57  E-value=0.56  Score=32.17  Aligned_cols=25  Identities=12%  Similarity=-0.000  Sum_probs=22.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      ..++.++.+||.++|..+|.+|++.
T Consensus       227 ~~~~~~~~~li~~~l~~~p~~Rp~~  251 (261)
T cd05072         227 ENCPDELYDIMKTCWKEKAEERPTF  251 (261)
T ss_pred             CCCCHHHHHHHHHHccCCcccCcCH
Confidence            3478899999999999999999984

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=88.41  E-value=0.54  Score=32.33  Aligned_cols=24  Identities=17%  Similarity=0.111  Sum_probs=22.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      .++.+.++||.++|..+|.+|++.
T Consensus       232 ~~~~~~~~li~~~l~~~p~~Rpt~  255 (267)
T cd08229         232 HYSEELRQLVNMCINPDPEKRPDI  255 (267)
T ss_pred             cccHHHHHHHHHhcCCCcccCCCH
Confidence            478899999999999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=88.22  E-value=0.72  Score=31.57  Aligned_cols=30  Identities=13%  Similarity=0.108  Sum_probs=25.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+.++.+||.+++..+|.+|++.     .++.
T Consensus       223 ~~~~~~~~~~li~~c~~~~p~~Rps~-----~~l~  252 (256)
T cd05114         223 PKLASMTVYEVMYSCWHEKPEGRPTF-----AELL  252 (256)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCH-----HHHH
Confidence            45578899999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=88.18  E-value=0.71  Score=31.73  Aligned_cols=26  Identities=15%  Similarity=0.010  Sum_probs=22.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +...+.++.++|.++|..+|.+|++.
T Consensus       225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~  250 (260)
T cd05073         225 PENCPEELYNIMMRCWKNRPEERPTF  250 (260)
T ss_pred             cccCCHHHHHHHHHHcccCcccCcCH
Confidence            34578899999999999999999974

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=88.10  E-value=0.6  Score=31.98  Aligned_cols=30  Identities=13%  Similarity=0.092  Sum_probs=25.3

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |..++....++|.++|..+|++|++.     .+|+
T Consensus       224 ~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~il  253 (262)
T cd05058         224 PEYCPDPLYEVMLSCWHPKPEMRPTF-----SELV  253 (262)
T ss_pred             CCcCCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence            44578899999999999999999984     6665

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=87.99  E-value=0.76  Score=31.57  Aligned_cols=26  Identities=8%  Similarity=-0.011  Sum_probs=23.1

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +...+..++++|.++|+.+|.+|+..
T Consensus       226 ~~~~~~~~~~li~~~l~~~P~~Rp~~  251 (261)
T cd05068         226 PPGCPKELYDIMLDCWKEDPDDRPTF  251 (261)
T ss_pred             CCcCCHHHHHHHHHHhhcCcccCCCH
Confidence            45678999999999999999999984

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=87.99  E-value=0.65  Score=32.58  Aligned_cols=26  Identities=15%  Similarity=0.207  Sum_probs=22.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +...+.++++||.++|+.+|.+|++.
T Consensus       247 ~~~~~~~~~~li~~~l~~~P~~Rpt~  272 (291)
T cd05094         247 PRVCPKEVYDIMLGCWQREPQQRLNI  272 (291)
T ss_pred             CccCCHHHHHHHHHHcccChhhCcCH
Confidence            34578899999999999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=87.95  E-value=0.66  Score=32.25  Aligned_cols=32  Identities=16%  Similarity=-0.007  Sum_probs=27.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +|...+.+..+||.++|+.+|.+|+..     .+|..
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~RP~~-----~~i~~  278 (283)
T cd05091         247 CPDDCPAWVYTLMLECWNEFPSRRPRF-----KDIHS  278 (283)
T ss_pred             CCCCCCHHHHHHHHHHhCCCcccCCCH-----HHHHH
Confidence            456688999999999999999999984     77754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=87.94  E-value=0.61  Score=32.79  Aligned_cols=30  Identities=3%  Similarity=-0.018  Sum_probs=25.1

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +...+...++||.++|..+|.+|++.     .+|.
T Consensus       261 ~~~~~~~l~~li~~~l~~~p~~RPs~-----~~i~  290 (295)
T cd05097         261 TPLCPSPVFKLMMRCWSRDIKDRPTF-----NKIH  290 (295)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCH-----HHHH
Confidence            34567899999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=87.88  E-value=0.64  Score=34.34  Aligned_cols=31  Identities=13%  Similarity=0.035  Sum_probs=26.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..+++++++||.++|+.+|.+|++.     .+|.
T Consensus       336 ~~~~~~~~l~~li~~cl~~dp~~RPs~-----~~l~  366 (374)
T cd05106         336 RPDFAPPEIYSIMKMCWNLEPTERPTF-----SQIS  366 (374)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            345678999999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=87.65  E-value=0.63  Score=32.10  Aligned_cols=31  Identities=13%  Similarity=-0.020  Sum_probs=25.7

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +...+.+..+|+.++|..+|.+|++.     .+++.
T Consensus       237 ~~~~~~~~~~l~~~~l~~~p~~Rps~-----~~~~~  267 (273)
T cd05074         237 PPDCLEDVYELMCQCWSPEPKCRPSF-----QHLRD  267 (273)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence            45577899999999999999999874     66653

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=87.58  E-value=0.64  Score=31.80  Aligned_cols=26  Identities=8%  Similarity=-0.091  Sum_probs=22.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +..++...++||+++|.++|.+|++.
T Consensus       219 ~~~~~~~~~~li~~~l~~~p~~Rp~~  244 (254)
T cd05083         219 PEGCPADVYVLMTSCWETEPKKRPSF  244 (254)
T ss_pred             CCcCCHHHHHHHHHHcCCChhhCcCH
Confidence            34578899999999999999999984

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=87.51  E-value=0.57  Score=33.99  Aligned_cols=33  Identities=6%  Similarity=0.102  Sum_probs=27.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|...+++..+++.++|+.+|.+|++     +.+|.+|
T Consensus       303 ~~~~~~~~~~~~~~~cl~~~p~~Rps-----~~eil~~  335 (343)
T cd05103         303 APDYTTPEMYQTMLDCWHGEPSQRPT-----FSELVEH  335 (343)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcC-----HHHHHHH
Confidence            34567889999999999999999997     4787755

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=87.37  E-value=0.65  Score=32.07  Aligned_cols=26  Identities=23%  Similarity=0.059  Sum_probs=22.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +..++....+||.++|+++|.+|++.
T Consensus       225 ~~~~~~~l~~li~~~l~~~p~~Rp~~  250 (262)
T cd05071         225 PPECPESLHDLMCQCWRKEPEERPTF  250 (262)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCH
Confidence            34578999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0589|consensus

Probab=87.32  E-value=0.66  Score=35.57  Aligned_cols=37  Identities=24%  Similarity=0.235  Sum_probs=33.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .|...|.+.+.||+.+|.++|..|+.     +.+++.+|...
T Consensus       226 lp~~ys~el~~lv~~~l~~~P~~RPs-----a~~LL~~P~l~  262 (426)
T KOG0589|consen  226 LPSMYSSELRSLVKSMLRKNPEHRPS-----ALELLRRPHLL  262 (426)
T ss_pred             CCccccHHHHHHHHHHhhcCCccCCC-----HHHHhhChhhh
Confidence            56779999999999999999999998     48999998765

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=87.28  E-value=0.89  Score=31.84  Aligned_cols=26  Identities=12%  Similarity=0.069  Sum_probs=23.3

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      |...+.+.+++|.++|+.+|.+|++.
T Consensus       251 ~~~~~~~~~~~i~~cl~~~P~~Rp~~  276 (290)
T cd05045         251 PENCSEEMYNLMLTCWKQEPDKRPTF  276 (290)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCCCH
Confidence            45688999999999999999999984

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG1989|consensus

Probab=87.22  E-value=0.49  Score=38.59  Aligned_cols=32  Identities=16%  Similarity=0.105  Sum_probs=26.6

Q ss_pred             CCCC--CCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKR--FVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~--~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .||.  ..|...++||+.||+.||.+|+.     +.+++
T Consensus       272 ~~P~~p~ys~~l~~LI~~mL~~nP~~RPn-----I~Qv~  305 (738)
T KOG1989|consen  272 SFPPFPNYSDRLKDLIRTMLQPNPDERPN-----IYQVL  305 (738)
T ss_pred             cCCCCccHHHHHHHHHHHHhccCcccCCC-----HHHHH
Confidence            4665  48899999999999999999997     45554

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=87.20  E-value=0.71  Score=32.15  Aligned_cols=30  Identities=7%  Similarity=-0.123  Sum_probs=25.6

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+.+.++||.++|+.+|..|++.     .+|.
T Consensus       246 ~~~~~~~~~~li~~cl~~~p~~Rps~-----~~i~  275 (283)
T cd05080         246 PKNCPQEVYILMKNCWETEAKFRPTF-----RSLI  275 (283)
T ss_pred             CCCCCHHHHHHHHHHhccChhhCCCH-----HHHH
Confidence            45678899999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=87.19  E-value=0.8  Score=31.52  Aligned_cols=31  Identities=10%  Similarity=0.018  Sum_probs=25.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +...+...+++|.++|..+|.+|++.     .+|..
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~ll~  253 (256)
T cd05113         223 PHLASEKVYAIMYSCWHEKAEERPTF-----QQLLS  253 (256)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCH-----HHHHH
Confidence            44578899999999999999999984     77654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=86.87  E-value=0.68  Score=31.89  Aligned_cols=29  Identities=17%  Similarity=0.064  Sum_probs=24.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .++.++++||+++|+.+|.+|++.     .++..
T Consensus       237 ~~~~~l~~li~~cl~~~p~~Rp~~-----~e~~~  265 (269)
T cd08528         237 MYSEDVTDVITSCLTPDAEARPDI-----IQVSA  265 (269)
T ss_pred             cCCHHHHHHHHHHCCCCCccCCCH-----HHHHH
Confidence            478899999999999999999984     66653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=86.83  E-value=0.66  Score=31.87  Aligned_cols=29  Identities=17%  Similarity=0.093  Sum_probs=24.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..+.+.++||+++|..+|.+|++     +.+|.+
T Consensus       232 ~~~~~~~~li~~cl~~~p~~Rp~-----~~~vl~  260 (267)
T cd08228         232 HYSEKLRELVSMCIYPDPDQRPD-----IGYVHQ  260 (267)
T ss_pred             hcCHHHHHHHHHHCCCCcccCcC-----HHHHHH
Confidence            46788999999999999999998     477653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=86.82  E-value=0.87  Score=32.15  Aligned_cols=30  Identities=10%  Similarity=-0.043  Sum_probs=25.5

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+...++||.++|..+|.+|++.     .+|.
T Consensus       270 ~~~~~~~~~~li~~cl~~~p~~RPs~-----~~i~  299 (304)
T cd05096         270 PPPCPQGLYELMLQCWSRDCRERPSF-----SDIH  299 (304)
T ss_pred             CCCCCHHHHHHHHHHccCCchhCcCH-----HHHH
Confidence            45578899999999999999999984     7763

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=86.66  E-value=0.77  Score=33.04  Aligned_cols=33  Identities=9%  Similarity=-0.012  Sum_probs=27.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|...+.++.+||.++|..+|.+|++     +.+|+.+
T Consensus       257 ~~~~~~~~l~~li~~cl~~~p~~Rps-----~~ell~~  289 (334)
T cd05100         257 KPANCTHELYMIMRECWHAVPSQRPT-----FKQLVED  289 (334)
T ss_pred             CCCCCCHHHHHHHHHHcccChhhCcC-----HHHHHHH
Confidence            34567889999999999999999997     4777654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=86.59  E-value=0.88  Score=31.13  Aligned_cols=24  Identities=17%  Similarity=0.148  Sum_probs=21.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      .++.+.+++|.+||..+|.+|++.
T Consensus       232 ~~~~~~~~~i~~cl~~~p~~Rp~~  255 (267)
T cd08224         232 HYSEELRDLVSRCINPDPEKRPDI  255 (267)
T ss_pred             hcCHHHHHHHHHHcCCCcccCCCH
Confidence            577899999999999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1035|consensus

Probab=86.39  E-value=0.63  Score=39.99  Aligned_cols=31  Identities=16%  Similarity=0.232  Sum_probs=28.5

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +..+.+|+.||..||.+|++     +.+++++.||.
T Consensus       845 ~~e~slI~~Ll~hdP~kRPt-----A~eLL~s~llp  875 (1351)
T KOG1035|consen  845 PEEASLIRWLLSHDPSKRPT-----ATELLNSELLP  875 (1351)
T ss_pred             hHHHHHHHHHhcCCCccCCC-----HHHHhhccCCC
Confidence            56788999999999999998     49999999998

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=85.89  E-value=0.87  Score=31.52  Aligned_cols=26  Identities=12%  Similarity=0.072  Sum_probs=23.0

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +..++.+..+||.++|..+|.+|++.
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rps~  258 (270)
T cd05047         233 PLNCDDEVYDLMRQCWREKPYERPSF  258 (270)
T ss_pred             CCcCCHHHHHHHHHHcccChhhCCCH
Confidence            44578899999999999999999984

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=85.84  E-value=0.98  Score=31.26  Aligned_cols=31  Identities=10%  Similarity=0.004  Sum_probs=26.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++..+.++|.+++..+|.+|++.     .+|.
T Consensus       229 ~~~~~~~~~~~li~~c~~~~p~~RP~~-----~~i~  259 (266)
T cd05064         229 APRNCPNLLHQLMLDCWQKERGERPRF-----SQIH  259 (266)
T ss_pred             CCCCCCHHHHHHHHHHcCCCchhCCCH-----HHHH
Confidence            355678999999999999999999984     6665

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=85.68  E-value=0.93  Score=31.45  Aligned_cols=29  Identities=10%  Similarity=-0.055  Sum_probs=24.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ..++.+..++|.++|..+|++|++.     .++.
T Consensus       242 ~~~~~~~~~li~~~l~~~p~~Rps~-----~~~~  270 (280)
T cd05043         242 INCPDELFAVMACCWALDPEERPSF-----SQLV  270 (280)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence            4568899999999999999999984     6654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=85.13  E-value=1.2  Score=31.38  Aligned_cols=30  Identities=7%  Similarity=-0.062  Sum_probs=25.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+.++++||.++|..+|.+|++.     .+|.
T Consensus       261 ~~~~~~~~~~li~~cl~~~p~~Rps~-----~e~l  290 (304)
T cd05101         261 PANCTNELYMMMRDCWHAIPSHRPTF-----KQLV  290 (304)
T ss_pred             CCCCCHHHHHHHHHHcccChhhCCCH-----HHHH
Confidence            45578999999999999999999974     6665

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=84.98  E-value=1.1  Score=30.87  Aligned_cols=25  Identities=8%  Similarity=-0.148  Sum_probs=22.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      ..++..+++++.++|+++|.+|++.
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~  256 (267)
T cd05066         232 MDCPAALHQLMLDCWQKDRNERPKF  256 (267)
T ss_pred             CCCCHHHHHHHHHHcccCchhCCCH
Confidence            4578899999999999999999984

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=84.78  E-value=1.3  Score=31.21  Aligned_cols=26  Identities=12%  Similarity=0.047  Sum_probs=22.7

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      |..++...++||.++|+.+|.+|++.
T Consensus       262 ~~~~~~~~~~li~~cl~~~p~~Rp~~  287 (296)
T cd05095         262 PALCPDSLYKLMLSCWRRNAKERPSF  287 (296)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCH
Confidence            34577899999999999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=84.64  E-value=1.2  Score=31.02  Aligned_cols=30  Identities=7%  Similarity=-0.181  Sum_probs=25.6

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +...+.+..++|.++|..+|..|++.     .++.
T Consensus       233 ~~~~~~~~~~li~~~l~~dp~~Rp~~-----~~l~  262 (279)
T cd05109         233 PPICTIDVYMIMVKCWMIDSECRPRF-----RELV  262 (279)
T ss_pred             CccCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            45578899999999999999999984     6665

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=84.42  E-value=1.2  Score=33.54  Aligned_cols=32  Identities=9%  Similarity=-0.018  Sum_probs=27.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++++||++++..+|.+|++.     .+|..
T Consensus       363 ~p~~~~~~l~~li~~cl~~~P~~RPs~-----~ell~  394 (401)
T cd05107         363 KPAHASDEIYEIMQKCWEEKFEIRPDF-----SQLVH  394 (401)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence            456688999999999999999999984     77653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=84.14  E-value=1.4  Score=30.39  Aligned_cols=29  Identities=14%  Similarity=0.051  Sum_probs=24.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ...+.+..+|+.++|..+|..|++.     .+|.
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rpt~-----~ei~  277 (284)
T cd05038         249 PSCPDEVYDLMKLCWEAEPQDRPSF-----ADLI  277 (284)
T ss_pred             ccCCHHHHHHHHHHhccChhhCCCH-----HHHH
Confidence            3456789999999999999999984     6664

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG4158|consensus

Probab=82.71  E-value=1.3  Score=34.34  Aligned_cols=45  Identities=20%  Similarity=0.198  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .|..+.+.+++||..||++||.+|.+.  +=+.-+.+-..+..-+|-
T Consensus       478 lp~~vpp~~rqlV~~lL~r~pskRvsp--~iAANvl~LsLw~~~~~v  522 (598)
T KOG4158|consen  478 LPSRVPPVARQLVFDLLKRDPSKRVSP--NIAANVLNLSLWRMGEDV  522 (598)
T ss_pred             CcccCChHHHHHHHHHhcCCccccCCc--cHHHhHHHHHHhcCchHH
Confidence            567899999999999999999999985  223445555555555553

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=82.29  E-value=1.5  Score=32.94  Aligned_cols=26  Identities=12%  Similarity=0.083  Sum_probs=23.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      |..++.++++||.++|..+|.+|++.
T Consensus       362 ~~~~~~~l~~li~~cl~~dP~~RPt~  387 (400)
T cd05105         362 PDHATQEVYDIMVKCWNSEPEKRPSF  387 (400)
T ss_pred             CccCCHHHHHHHHHHCccCHhHCcCH
Confidence            45688999999999999999999974

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0577|consensus

Probab=81.09  E-value=1.1  Score=36.24  Aligned_cols=34  Identities=24%  Similarity=0.161  Sum_probs=31.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .||...+.+|..+|++-|..|.++     ++++.|+|..
T Consensus       249 eWS~~F~~Fvd~CLqKipqeRpts-----e~ll~H~fv~  282 (948)
T KOG0577|consen  249 EWSDYFRNFVDSCLQKIPQERPTS-----EELLKHRFVL  282 (948)
T ss_pred             hhHHHHHHHHHHHHhhCcccCCcH-----HHHhhcchhc
Confidence            489999999999999999999996     9999999965

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=80.65  E-value=2.2  Score=29.30  Aligned_cols=29  Identities=10%  Similarity=-0.033  Sum_probs=24.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ...+.+..+||.++|+.+|..|++.     .+|.
T Consensus       233 ~~~~~~~~~li~~c~~~~p~~Rp~~-----~~i~  261 (268)
T cd05063         233 MDCPSAVYQLMLQCWQQDRARRPRF-----VDIV  261 (268)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCH-----HHHH
Confidence            3468899999999999999999974     6664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=80.59  E-value=2.2  Score=29.35  Aligned_cols=30  Identities=7%  Similarity=-0.125  Sum_probs=25.1

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |...+....++|.++|..+|.+|+..     .+|.
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~i~  262 (269)
T cd05065         233 PMDCPTALHQLMLDCWQKDRNARPKF-----GQIV  262 (269)
T ss_pred             cccCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            34578899999999999999999984     6665

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	111
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-16
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-16
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-14
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-14
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-13
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-13
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		6e-13
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		1e-12
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		1e-12
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		1e-12
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-12
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-12
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-12
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		7e-12
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		8e-12
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-11
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		5e-11
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-10
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-10
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-09
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-09
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-09
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		8e-09
3g51_A	325	Structural Diversity Of The Active Conformation Of		8e-09
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		8e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-08
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-08
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-07
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-07
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-07
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-07
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-06
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		8e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		8e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-05
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-05
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		3e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		6e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		8e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-04

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 244 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 303
Query: 78  TSEKPELTPP--KDPRPLTD----DEQNLFKDFTYMADW 110
           T++   +TPP   D   L +    +EQ +F+DF Y+ADW
Sbjct: 304 TAQSITITPPDRYDSLGLLELDQREEQEMFEDFDYIADW 342

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 298
Query: 78  TSEKPELTPP--KDPRPLTD----DEQNLFKDFTYMADW 110
           T++   +TPP   D   L +    +EQ +F+DF Y+ADW
Sbjct: 299 TAQSITITPPDRYDSLGLLELDQREEQEMFEDFDYIADW 337

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K+LL++N   RLG+   DA +V+   FFRHI WEELL R+V+PPF P +    DVS FD 
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDS 312
Query: 76  EFTSEKPELTP 86
           +FT + P  +P
Sbjct: 313 KFTRQTPVDSP 323

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K+LL++N   RLG+   DA +V+   FFRHI WEELL R+V+PPF P +    DVS FD 
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDS 312
Query: 76  EFTSEKPELTP 86
           +FT + P  +P
Sbjct: 313 KFTRQTPVDSP 323

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K L+ K+P +RLG       DV++ AFFR I WE+L +R ++PPF P V   G   NFD+
Sbjct: 252 KGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGKG-AENFDK 310
Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            FT  +P L PP D   + + +Q+ F+ F Y+
Sbjct: 311 FFTRGQPVLXPP-DQLVIANIDQSDFEGFXYV 341

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 242 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 301
Query: 78  TSEKPELTPP--KDPRPLTD-DEQNLFKDFTYMAD 109
           T++   +TPP   D   L + D++  F  F+Y A 
Sbjct: 302 TAQSITITPPDRYDSLGLLELDQRTHFPQFSYSAS 336

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 298
Query: 78  TSEKPELTPP--KDPRPLTD-DEQNLFKDFTYMAD 109
           T++   +TPP   D   L + D++  F  F+Y A 
Sbjct: 299 TAQSITITPPDRYDSLGLLELDQRTHFPQFSYSAS 333

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA+++ +  FF  I W+ +  +++ PPF P VT   D   FDEEF
Sbjct: 244 LLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF 303
Query: 78  TSEKPELTPP 87
           T++   +TPP
Sbjct: 304 TAQMITITPP 313

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA+++ +  FF  I W+ +  +++ PPF P VT   D   FDEEF
Sbjct: 245 LLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF 304
Query: 78  TSEKPELTPP 87
           T++   +TPP
Sbjct: 305 TAQMITITPP 314

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA+++ +  FF  I W+ +  +++ PPF P VT   D   FDEEF
Sbjct: 243 LLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF 302
Query: 78  TSEKPELTPP 87
           T++   +TPP
Sbjct: 303 TAQMITITPP 312

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 298
Query: 78  TSEKPELTPP--KDPRPLTD-DEQNLFKDFTYMAD 109
           T++   +TPP   D   L + D++  F  F Y A 
Sbjct: 299 TAQSITITPPDRYDSLGLLELDQRTHFPQFDYSAS 333

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 16  KELLRKNPERRLGSSERDAED-VKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  + KNP  RLGS  +  E  + +  FF+ I W +L HR+++PPF P +    DVSNFD
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFD 315
Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
            +F  E+P L  P D   L    Q+ F++F Y++
Sbjct: 316 PDFIKEEPVLX-PIDEGHLPMINQDEFRNFEYVS 348

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 298
Query: 78  TSEKPELTPP 87
           T++   +TPP
Sbjct: 299 TAQSITITPP 308

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 17  ELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEE 76
           +L  + PE+RLG       D+++   FR I WEEL  + + PPF P V    D SNFD+E
Sbjct: 251 KLFVREPEKRLGVRG----DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKE 306
Query: 77  FTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
           F +EKP L+   D   +   +QN+F++F +M
Sbjct: 307 FLNEKPRLSFA-DRALINSMDQNMFRNFXFM 336

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+EF
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 298
Query: 78  TSEKPELTPP--KDPRPLTD-DEQNLFKDFTYMAD 109
           T++   + PP   D   L + D++  F  F Y A 
Sbjct: 299 TAQSITIXPPDRYDSLGLLELDQRTHFPQFDYSAS 333

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 17  ELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEE 76
           +L  + PE+RLG       D+++   FR I WEEL  + + PPF P V    D SNFD+E
Sbjct: 252 KLFVREPEKRLGVRG----DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKE 307
Query: 77  FTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
           F +EKP L    D   +   +QN+F++F +M
Sbjct: 308 FLNEKPRLXFA-DRALINSMDQNMFRNFXFM 337

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K L+ K+P +RLG       D+K+ AFFR+I WE+L  + ++PP+ P  +   +  NFD 
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDR 632
Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            FT   P L PP D   + + +Q+ F+ F ++
Sbjct: 633 FFTRHPPVLXPP-DQEVIRNIDQSEFEGFXFV 663

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K L+ K+P +RLG       D+K+ AFFR+I WE+L  + ++PP+ P      +  NFD 
Sbjct: 253 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACG-RNAENFDR 311
Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            FT   P L PP D   + + +Q+ F+ F ++
Sbjct: 312 FFTRHPPVLXPP-DQEVIRNIDQSEFEGFXFV 342

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA+++ +  FF  I W+ +  +++ PPF P VT   D   FDEEF
Sbjct: 383 LLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF 442
Query: 78  TSE 80
           T++
Sbjct: 443 TAQ 445

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+P++RLG    DA+++ +  FF  I W+ +  +++ PPF P VT   D   FDEEF
Sbjct: 386 LLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF 445
Query: 78  T 78
           T
Sbjct: 446 T 446

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNF 73
           + LL K+P++RLG   RDA+++K+  FF+ I W++L  ++V  PF P + D  DVSNF
Sbjct: 298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D++   FFR++ W+ +  ++V PPF P ++    + NFD
Sbjct: 262 KSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 321
Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +FT+E+ +L P  D      D Q+ F+ F Y+
Sbjct: 322 SQFTNERVQLXPDDDDIVRKID-QSEFEGFEYI 353

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D++   FFR++ W+ +  ++V PPF P ++    + NFD
Sbjct: 294 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353
Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +FT+E  +L P  D      D Q+ F+ F Y+
Sbjct: 354 SQFTNEPVQLXPDDDDIVRKID-QSEFEGFEYI 385

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D++   FFR++ W+ +  ++V PPF P ++    + NFD
Sbjct: 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310
Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +FT+E  +L P  D      D Q+ F+ F Y+
Sbjct: 311 SQFTNEPVQLXPDDDDIVRKID-QSEFEGFEYI 342

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           L ++NP  RLG+     E++K+ +FF  I W +L  R + PPF P      D   FD EF
Sbjct: 260 LFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDPEF 319
Query: 78  TSEKPE 83
           T++ P+
Sbjct: 320 TAKTPK 325

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D++   FFR++ W+ +  ++V PPF P ++    + NFD
Sbjct: 247 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 306
Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYM 107
            +FT+E  +L P  D      D Q+ F+ F Y+
Sbjct: 307 SQFTNEPVQLXPDDDDIVRKID-QSEFEGFEYI 338

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEF 77
           LL+K+  +RLG+ + D  ++K   FF  I W++L+++++ PPF P V+   D+ +FD EF
Sbjct: 273 LLQKDRTKRLGAKD-DFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEF 331
Query: 78  TSE 80
           T E
Sbjct: 332 TEE 334

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           + L ++NP  RLGS    AE++K+  F+  I W +L  R +KPPF P V    D   FD
Sbjct: 262 RALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP-----TVTDVGDVSN 72
           LL+++  RRLG   R A++VK+  FFR + W+ +  ++  PP +P        D  D+ +
Sbjct: 428 LLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS 487
Query: 73  FDEEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
           FDEE T              L D +Q L+++F
Sbjct: 488 FDEEDTK----------GIKLLDSDQELYRNF 509

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP-----TVTDVGDVSN 72
           LL+++  RRLG   R A++VK+  FFR + W+ +  ++  PP +P        D  D+ +
Sbjct: 428 LLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS 487
Query: 73  FDEEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
           FDEE T              L D +Q L+++F
Sbjct: 488 FDEEDTK----------GIKLLDSDQELYRNF 509

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP-----TVTDVGDVSN 72
           LL+++  RRLG   R A++VK+  FFR + W+ +  ++  PP +P        D  D+ +
Sbjct: 428 LLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS 487
Query: 73  FDEEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
           FDEE T              L D +Q L+++F
Sbjct: 488 FDEEDTK----------GIKLLDSDQELYRNF 509

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP-----TVTDVGDVSN 72
           LL+++  RRLG   R A++VK+  FFR + W+ +  ++  PP +P        D  D+ +
Sbjct: 427 LLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS 486
Query: 73  FDEEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
           FDEE T              L D +Q L+++F
Sbjct: 487 FDEEDTK----------GIKLLDSDQELYRNF 508

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
           E  K+L+++   + ERRLG  +   ED KK AFF  + WE +  R ++ P++P V+   D
Sbjct: 327 EEAKDLIQRLICSRERRLG--QNGIEDFKKHAFFEGLNWENI--RNLEAPYIPDVSSPSD 382
Query: 70  VSNFD-EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
            SNFD ++      E+ PP      +      F  FT+  + C
Sbjct: 383 TSNFDVDDDVLRNTEILPPGSHTGFSGLHLP-FIGFTFTTESC 424

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
           E  K+L+++   + ERRLG  +   ED KK AFF  + WE +  R ++ P++P V+   D
Sbjct: 311 EEAKDLIQRLICSRERRLG--QNGIEDFKKHAFFEGLNWENI--RNLEAPYIPDVSSPSD 366
Query: 70  VSNFD-EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMADWC 111
            SNFD ++      E+ PP      +      F  FT+  + C
Sbjct: 367 TSNFDVDDDVLRNTEILPPGSHTGFSGLHLP-FIGFTFTTESC 408

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           L ++NP  RLG+     E++K+ +FF  I W +L  R + PPF P
Sbjct: 261 LFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           L ++NP  RLG+     E++K+ +FF  I W +L  R + PPF P
Sbjct: 260 LFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTD-VGDVSNFDE 75
           L+ ++  +RLG+ +   EDVK   +F+ + WE+LL R ++ P+ P +    GD S FD+
Sbjct: 237 LITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDK 295

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 257 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 316

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 291 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 350

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 291 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 350

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 263 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 322

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 265 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 324

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 263 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 322

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 291 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 350

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 13  ERWKELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD 69
           E  K+L+R+   + E RLG  +   ED KK  FF  I W+ +  R  + P++P V+   D
Sbjct: 311 ENAKDLIRRLICSREHRLG--QNGIEDFKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTD 366
Query: 70  VSNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
            SNFD +    K   T P             F  FTY +
Sbjct: 367 TSNFDVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTS 405

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 256 RNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 315

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP--------TVTDVGD 69
           LL+K+PE+RLG  +   + ++    FR I W +L    + PPFVP         + DVG 
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKCIQDVGA 486
Query: 70  VSNF--------DEEFTSEKPELTPP 87
            S          D EF  E    T P
Sbjct: 487 FSTVKGVAFEKADTEFFQEFASGTCP 512

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP--------TVTDVGD 69
           LL+K+PE+RLG  +   + ++    FR I W +L    + PPFVP         + DVG 
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 70  VSNF--------DEEFTSEKPELTPP 87
            S          D EF  E    T P
Sbjct: 487 FSTVKGVAFEKADTEFFQEFASGTCP 512

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP--------TVTDVGD 69
           LL+K+PE+RLG  +   + ++    FR I W +L    + PPFVP         + DVG 
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 70  VSNF--------DEEFTSEKPELTPP 87
            S          D EF  E    T P
Sbjct: 487 FSTVKGVAFEKADTEFFQEFASGTCP 512

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
Query: 18  LLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP--------TVTDVGD 69
           LL+K+PE+RLG  +   + ++    FR I W +L    + PPFVP         + DVG 
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 70  VSNF--------DEEFTSEKPELTPP 87
            S          D EF  E    T P
Sbjct: 487 FSTVKGVAFEKADTEFFQEFASGTCP 512

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+    +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 271 RNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 330

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +  G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD+
Sbjct: 270 RNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+      D+K   +F    W  +  R+V+ PF+P     GD SN D+
Sbjct: 270 RNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADD 329

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	111
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-43
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-41
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-40
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-39
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-39
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	9e-39
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-38
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-35
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-35
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-32
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-28
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-28
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-28
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-27
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-27
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-27
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-27
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-26
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-26
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	8e-24
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	4e-20
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-10

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  142 bits (361), Expect = 3e-43
 Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 6/101 (5%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
             LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

Query: 76  EFTSEKPELTPPKDPRP------LTDDEQNLFKDFTYMADW 110
           EFT++   +TPP              +EQ +F+DF Y+ADW
Sbjct: 297 EFTAQSITITPPDRYDSLGLLELDQREEQEMFEDFDYIADW 337

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  138 bits (350), Expect = 2e-41
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K L+ K+P +RLG       D+K+ AFFR+I WE+L  + ++PP+ P      +  NFD 
Sbjct: 253 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDR 311

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
            FT   P LTPP D   + + +Q+ F+ F+++  
Sbjct: 312 FFTRHPPVLTPP-DQEVIRNIDQSEFEGFSFVNS 344

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  135 bits (341), Expect = 5e-40
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 16  KELLRKNPERRLGSSERDAE-DVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  + KNP  RLGS  +  E  + +  FF+ I W +L HR+++PPF P +    DVSNFD
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFD 315

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
            +F  E+P LTP  D   L    Q+ F++F Y++ 
Sbjct: 316 PDFIKEEPVLTPI-DEGHLPMINQDEFRNFEYVSP 349

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  133 bits (336), Expect = 2e-39
 Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D++   FFR++ W+ +  ++V PPF P ++    + NFD
Sbjct: 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
            +FT+E  +LTP  D   +   +Q+ F+ F Y+ 
Sbjct: 311 SQFTNEPVQLTPD-DDDIVRKIDQSEFEGFEYIN 343

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  137 bits (345), Expect = 3e-39
 Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 2/94 (2%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K L+ K+P +RLG       D+K+ AFFR+I WE+L  + ++PP+ P  +   +  NFD 
Sbjct: 574 KGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDR 632

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
            FT   P LTPP D   + + +Q+ F+ F+++  
Sbjct: 633 FFTRHPPVLTPP-DQEVIRNIDQSEFEGFSFVNS 665

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  132 bits (334), Expect = 9e-39
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 16  KELLRKNPERRLGSSERDA-EDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
           K  L K+P+ RLG   +    D++   FFR++ W+ +  ++V PPF P ++    + NFD
Sbjct: 294 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
            +FT+E  +LTP  D   +   +Q+ F+ F Y+  
Sbjct: 354 SQFTNEPVQLTPD-DDDIVRKIDQSEFEGFEYINP 387

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  131 bits (331), Expect = 1e-38
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 5/93 (5%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
            +L  + PE+RLG       D+++   FR I WEEL  + + PPF P V    D SNFD+
Sbjct: 250 VKLFVREPEKRLGV----RGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK 305

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
           EF +EKP L+   D   +   +QN+F++F++M 
Sbjct: 306 EFLNEKPRLSFA-DRALINSMDQNMFRNFSFMN 337

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  123 bits (312), Expect = 1e-35
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+K+  +RLG+ + D  ++K   FF  I W++L+++++ PPF P V+   D+ +FD 
Sbjct: 271 EGLLQKDRTKRLGAKD-DFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDP 329

Query: 76  EFTSEKPELTPPKDPR-----PLTDDEQNLFKDFTYMAD 109
           EFT E       K P          +    F  F+Y   
Sbjct: 330 EFTEEPVPNAIGKAPDSVLVTASVKEAAEAFLGFSYAPP 368

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  121 bits (306), Expect = 4e-35
 Identities = 35/72 (48%), Positives = 47/72 (65%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K+LL++N   RLG+   DA +V+   FFRHI WEELL R+V+PPF P +    DVS FD 
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDS 312

Query: 76  EFTSEKPELTPP 87
           +FT + P  +P 
Sbjct: 313 KFTRQTPVDSPD 324

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  113 bits (284), Expect = 7e-32
 Identities = 25/68 (36%), Positives = 38/68 (55%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + L ++NP  RLG+     E++K+ +FF  I W +L  R + PPF P      D   FD 
Sbjct: 258 RMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDP 317

Query: 76  EFTSEKPE 83
           EFT++ P+
Sbjct: 318 EFTAKTPK 325

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  105 bits (264), Expect = 2e-28
 Identities = 26/65 (40%), Positives = 41/65 (63%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
             LL+K+P++RLG    DA+++ +  FF  I W+ +  +++ PPF P VT   D   FDE
Sbjct: 381 SGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440

Query: 76  EFTSE 80
           EFT++
Sbjct: 441 EFTAQ 445

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  104 bits (261), Expect = 4e-28
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 16  KELLR---KNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSN 72
           K L+     + E RLG      E++K+  FF++ QW     R    P VP ++   D SN
Sbjct: 305 KNLICAFLTDREVRLGR--NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSN 362

Query: 73  FDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
           FD+    +  E T P          Q  F  FTY ++
Sbjct: 363 FDDLEEDKGEEETFPIP--KAFVGNQLPFVGFTYYSN 397

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  104 bits (261), Expect = 5e-28
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 16  KELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSN 72
           K+L+R+   + E RLG      ED KK  FF  I W+ +  R  + P++P V+   D SN
Sbjct: 314 KDLIRRLICSREHRLGQ--NGIEDFKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTDTSN 369

Query: 73  FDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
           FD +    K   T P             F  FTY + 
Sbjct: 370 FDVDDDCLKNSETMPPPTHTAFSGHHLPFVGFTYTSS 406

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  104 bits (260), Expect = 1e-27
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 11/95 (11%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVG--DVSNF 73
            +LL K+P  RLG     A +VK+   F+ + ++ L    ++PPF P    +   DV + 
Sbjct: 421 SQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDI 480

Query: 74  DEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
           ++  T +  EL P          +Q+ ++ F   +
Sbjct: 481 EQFSTVKGVELEPT---------DQDFYQKFATGS 506

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  104 bits (260), Expect = 1e-27
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT-----VTDVGDV 70
           + LL+++  RRLG   R A++VK+  FFR + W+ +  ++  PP +P        D  D+
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDI 485

Query: 71  SNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA 108
            +FDEE T              L D +Q L+++F    
Sbjct: 486 GSFDEEDTKGI----------KLLDSDQELYRNFPLTI 513

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  101 bits (254), Expect = 2e-27
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD 
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD- 328

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
           ++  E+  ++         +     F +F
Sbjct: 329 DYEEEEIRVSIN-------EKCGKEFTEF 350

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  101 bits (253), Expect = 2e-27
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTD-VGDVSNFD 74
             L+ ++  +RLG+ +   EDVK   +F+ + WE+LL R ++ P+ P +    GD S FD
Sbjct: 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFD 294

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
            ++  E              D   +LF+DF
Sbjct: 295 -KYPEEDINYGV-----QGEDPYADLFRDF 318

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 99.4 bits (248), Expect = 3e-26
 Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 16  KELLRK---NPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSN 72
           ++ +++    PE RLG     A D +   FF  + W+ L  R   PPF P      D  N
Sbjct: 303 RDFIQRLLCPPETRLGR--GGAGDFRTHPFFFGLDWDGL--RDSVPPFTPDFEGATDTCN 358

Query: 73  FDEEFTSEKPELTPPKDPRPLTDDE-----QNLFKDFTYMAD 109
           FD         ++   +      +         F  ++Y   
Sbjct: 359 FDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSCM 400

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 99.5 bits (248), Expect = 6e-26
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 17/110 (15%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTV-----TDVGDV 70
           + LL+K+PE+RLG  +   + ++    FR I W +L    + PPFVP        ++ DV
Sbjct: 425 EALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDV 484

Query: 71  SNF-----------DEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
             F           D EF  E    T P  P      E  +F D      
Sbjct: 485 GAFSTVKGVAFEKADTEFFQEFASGTCP-IPWQEEMIETGVFGDLNVWRP 533

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 92.0 bits (229), Expect = 8e-24
 Identities = 26/58 (44%), Positives = 40/58 (68%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNF 73
           + LL K+P++RLG   RDA+++K+  FF+ I W++L  ++V  PF P + D  DVSNF
Sbjct: 298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 82.4 bits (204), Expect = 4e-20
 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 11/93 (11%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
           K+LL  NP++R         DV+   +   I W+ +  +R+ P F+P         N D 
Sbjct: 252 KKLLEPNPDQRFS----QLSDVQNFPYMNDINWDAVFQKRLIPGFIPNK----GRLNCDP 303

Query: 76  EFTSEKPELTPP---KDPRPLTDDEQNLFKDFT 105
            F  E+  L      K  + L   E+++ K  +
Sbjct: 304 TFELEEMILESKPLHKKKKRLAKKEKDMRKCDS 336

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 16  KELLRKNPERRLGSSER-DAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           ++LL  +  +RLG  E      +K   FF  + WE L  +   PP + 
Sbjct: 264 EKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ--TPPKLT 309

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	111
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.89
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.88
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.88
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.87
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.86
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.84
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.83
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.83
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.83
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.76
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.75
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.73
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.73
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.71
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.67
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.67
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.6
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.6
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.47
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.4
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.39
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.36
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	98.79
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.69
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.63
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.54
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.48
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.48
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	98.45
3niz_A	311	Rhodanese family protein; structural genomics, str	98.44
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.42
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.38
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.35
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	98.34
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.34
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.32
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.32
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.32
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.28
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.27
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.26
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.26
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.24
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.22
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.22
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.2
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.2
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.15
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.14
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.11
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.1
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.07
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.07
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.06
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.06
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.06
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.03
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.02
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.02
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	97.99
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.99
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	97.98
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	97.98
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	97.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	97.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	97.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	97.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.93
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	97.92
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	97.92
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.92
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	97.92
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	97.9
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	97.9
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	97.89
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	97.88
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	97.87
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	97.87
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	97.85
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	97.84
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	97.84
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	97.84
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	97.81
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	97.78
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	97.77
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	97.77
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.76
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	97.76
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	97.75
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	97.74
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.74
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	97.73
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.73
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.72
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	97.72
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	97.71
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	97.71
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	97.7
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	97.7
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	97.68
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	97.67
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	97.67
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	97.66
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	97.66
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	97.66
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	97.65
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	97.65
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	97.64
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.62
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	97.62
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	97.62
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	97.61
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	97.6
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	97.6
3fme_A	290	Dual specificity mitogen-activated protein kinase;	97.58
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	97.57
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	97.57
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	97.56
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	97.54
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	97.52
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	97.51
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	97.51
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.49
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	97.49
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	97.49
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	97.48
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	97.48
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	97.47
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	97.47
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	97.47
3bhy_A	283	Death-associated protein kinase 3; death associate	97.44
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	97.44
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	97.41
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	97.39
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	97.37
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	97.36
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	97.34
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	97.24
2dyl_A	318	Dual specificity mitogen-activated protein kinase	97.2
3an0_A	340	Dual specificity mitogen-activated protein kinase;	97.2
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	97.18
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	97.14
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	97.14
3aln_A	327	Dual specificity mitogen-activated protein kinase;	97.11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	96.96
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	96.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	96.93
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	96.71
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.51
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	95.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	95.88
3ork_A	311	Serine/threonine protein kinase; structural genomi	95.64
4aoj_A	329	High affinity nerve growth factor receptor; transf	95.61
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	95.37
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	95.01
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	94.99
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	94.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	94.89
2a19_B	284	Interferon-induced, double-stranded RNA-activated	94.76
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	94.73
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	94.71
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	94.7
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	94.67
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	94.62
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	94.62
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	94.57
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	94.56
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	94.51
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	94.51
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	94.41
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	94.39
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.34
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	94.29
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	94.24
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	94.2
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	94.13
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	94.11
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	94.02
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	94.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	93.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	93.92
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	93.85
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	93.83
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	93.81
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	93.79
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	93.73
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	93.72
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	93.64
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	93.61
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	93.52
3pls_A	298	Macrophage-stimulating protein receptor; protein k	93.42
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	93.41
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	93.25
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	93.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	92.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	92.93
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	92.85
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	92.74
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	92.69
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	92.66
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	92.55
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	92.46
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	92.28
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	92.2
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	92.19
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	92.17
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	92.16
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	92.14
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	92.11
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	91.99
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	91.68
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	91.63
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	91.63
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	91.42
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	91.36
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	91.33
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	91.29
3uqc_A	286	Probable conserved transmembrane protein; structur	91.06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	90.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	90.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	90.82
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	90.67
3q4u_A	301	Activin receptor type-1; structural genomics conso	90.17
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	90.11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	89.99
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	89.78
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	89.73
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	89.62
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	89.52
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	89.41
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	89.34
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	88.41
3soc_A	322	Activin receptor type-2A; structural genomics cons	87.89
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	87.73
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	87.51
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	87.5
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	86.56
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	82.68
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	82.02

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.89  E-value=7e-24  Score=156.32  Aligned_cols=108  Identities=30%  Similarity=0.573  Sum_probs=92.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..+|.++++||++||++||.+|+|+.. .|+.+|++||||+++||+.+.++++.|||+|.+.+..|+++||.+|+.+
T Consensus       280 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~  359 (396)
T 4dc2_A          280 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNE  359 (396)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCCCCCCSSTTGGGSCHHHHTS
T ss_pred             CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCcCCCCCccchhhcChhhccC
Confidence            578899999999999999999999999753 3789999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      .+..++.+. ......++..|.||||+++.
T Consensus       360 ~~~~~~~~~-~~~~~~~~~~f~~f~~~~~~  388 (396)
T 4dc2_A          360 PVQLTPDDD-DIVRKIDQSEFEGFEYINPL  388 (396)
T ss_dssp             CCCCCCCCH-HHHTTSCGGGGTTCCEECC-
T ss_pred             CCccCCCcc-hhhccccccccCCcEeECcc
Confidence            887776432 11222356789999999975

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.88  E-value=7.4e-23  Score=147.68  Aligned_cols=109  Identities=37%  Similarity=0.729  Sum_probs=89.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+|+++++||++||++||.+|+|++..++.+|++||||.+++|+.+.++++.|||+|.+.+..|+++|+.+|+.+.
T Consensus       223 ~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~  302 (337)
T 1o6l_A          223 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQS  302 (337)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCHHHHTSC
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCCCcchhhcccchhccCc
Confidence            57888999999999999999999999987778999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCCCCC---C---hhhcCCCCCceeccCC
Q psy3349          82 PELTPPKDPRPL---T---DDEQNLFKDFTYMADW  110 (111)
Q Consensus        82 ~~~~~~~~~~~~---~---~~~~~~F~~Fsy~~~~  110 (111)
                      ...+++......   .   ..++..|.||||+++|
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~~  337 (337)
T 1o6l_A          303 ITITPPDRYDSLGLLELDQREEQEMFEDFDYIADW  337 (337)
T ss_dssp             CC--------------------CCTTTTCCEECCC
T ss_pred             cCcCCCcccccccccccccccccccCCCceecCCC
Confidence            766654322111   1   1256899999999986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.88  E-value=1.4e-22  Score=147.02  Aligned_cols=108  Identities=34%  Similarity=0.633  Sum_probs=93.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCC-CCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGS-SERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~-~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..++.++++||++||++||.+|+++ ..+|+.+|++||||++++|+.+..+++.|||+|.+++..|+++||.+|+.+
T Consensus       242 ~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~~~~~f~~~~~~~  321 (353)
T 3txo_A          242 VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKE  321 (353)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCCCcccccccCcccccC
Confidence            5788899999999999999999999997 345779999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      .+..++.... .....++..|.||+|+++.
T Consensus       322 ~~~~~~~~~~-~~~~~~~~~f~~f~~~~~~  350 (353)
T 3txo_A          322 EPVLTPIDEG-HLPMINQDEFRNFEYVSPE  350 (353)
T ss_dssp             CCCCCCCCTT-SGGGSCGGGGTTCCEECC-
T ss_pred             CCcCCCcccc-ccCcccccccCCceeeCcc
Confidence            8877764322 2223457789999999875

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.87  E-value=3.9e-23  Score=160.70  Aligned_cols=109  Identities=30%  Similarity=0.621  Sum_probs=94.4

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      +.+|..+|.++++||++||++||.+|+|+..+|+++|++||||+++||+.+.++++.|||+|.+.+ .|++|||.+|+.+
T Consensus       559 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~-~~~~~f~~~~~~~  637 (674)
T 3pfq_A          559 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG-RNAENFDRFFTRH  637 (674)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG-GGHHHHTTTTTSS
T ss_pred             CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCCC-CchhhcCchhccC
Confidence            357889999999999999999999999987788999999999999999999999999999999888 8999999999998


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceeccCCC
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMADWC  111 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~~  111 (111)
                      .+..++.+.. .....++..|.||||+++.+
T Consensus       638 ~~~~~~~~~~-~~~~~~~~~f~~f~~~~~~~  667 (674)
T 3pfq_A          638 PPVLTPPDQE-VIRNIDQSEFEGFSFVNSEF  667 (674)
T ss_dssp             CSSCCCCCHH-HHTTCCGGGGTTCCEECSSC
T ss_pred             CCccCCCchh-hhhcccccccCCCcccChhh
Confidence            8877764321 11223577899999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.86  E-value=1.2e-22  Score=147.45  Aligned_cols=107  Identities=31%  Similarity=0.624  Sum_probs=89.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+|.++++||++||+++|.+|+|+..+++.+|++||||++++|+.+..+++.|||+|.+.+. |+++|+.+++.+.
T Consensus       239 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~~~~-~~~~f~~~~~~~~  317 (353)
T 2i0e_A          239 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTRHP  317 (353)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCC---CHHHHHHHHSC
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCCCCCCc-chhhccchhccCC
Confidence            578889999999999999999999999877789999999999999999999999999999999888 9999999998887


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      +..++... .......+..|.||||+++.
T Consensus       318 ~~~~~~~~-~~~~~~~~~~f~~f~~~~~~  345 (353)
T 2i0e_A          318 PVLTPPDQ-EVIRNIDQSEFEGFSFVNSE  345 (353)
T ss_dssp             CCCCCCCH-HHHHHSCTTTTCSCCEECTT
T ss_pred             cccCCccc-cccccccccccCCCeeeCcc
Confidence            66554321 00111356789999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.84  E-value=3.3e-21  Score=150.09  Aligned_cols=97  Identities=29%  Similarity=0.544  Sum_probs=76.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCC-----CCCCCcc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD-----VSNFDEE   76 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d-----~~~f~~~   76 (111)
                      .+|..+|++|++||++||++||.+|+|+..+|+.+|++||||++|||+.|..+++.|||+|.+....+     +++||++
T Consensus       412 ~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~~~~~~~fD~~~fd~e  491 (689)
T 3v5w_A          412 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEE  491 (689)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTCSSTTBCCC-------
T ss_pred             CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCCCCCCcCCCCCCccCCcc
Confidence            57889999999999999999999999998889999999999999999999999999999998765554     4555554


Q ss_pred             ccCCCCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          77 FTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      ++...          .....+++.|.+|+|..
T Consensus       492 ~~~~~----------~~~~~d~~~f~~Fs~~~  513 (689)
T 3v5w_A          492 DTKGI----------KLLDSDQELYRNFPLTI  513 (689)
T ss_dssp             --CCC----------CCCHHHHTTTTTCCEEC
T ss_pred             ccCCC----------CCCchHHHHHhCCCccC
Confidence            44321          23456789999999964

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.83  E-value=5.5e-21  Score=139.66  Aligned_cols=108  Identities=29%  Similarity=0.549  Sum_probs=60.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||++||.+|+++. .++.+|++|+||+++||+.+.++++.|||+|.+.+..|+++|+.+|+.+.
T Consensus       257 ~~~~~~~~~~~~li~~lL~~dp~~R~~~~-~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~  335 (373)
T 2r5t_A          257 QLKPNITNSARHLLEGLLQKDRTKRLGAK-DDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEP  335 (373)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSGGGSTTTT-TTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCCC---------------
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHhCCCCC-CCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCCCcchhhhcCccccccc
Confidence            57788999999999999999999999974 57899999999999999999999999999999999999999999888876


Q ss_pred             CCCCCCCCCC--CC---ChhhcCCCCCceeccCC
Q psy3349          82 PELTPPKDPR--PL---TDDEQNLFKDFTYMADW  110 (111)
Q Consensus        82 ~~~~~~~~~~--~~---~~~~~~~F~~Fsy~~~~  110 (111)
                      ...+......  ..   ....+..|.||||+++.
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~~~~  369 (373)
T 2r5t_A          336 VPNAIGKAPDSVLVTASVKEAAEAFLGFSYAPPT  369 (373)
T ss_dssp             ----------------------------------
T ss_pred             ccccccCCccccccccccccccccCCCCcccCch
Confidence            4432211110  00   11235679999999875

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.83  E-value=4.7e-21  Score=138.71  Aligned_cols=104  Identities=35%  Similarity=0.657  Sum_probs=57.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+|.++++||++||++||.+|+++    ..+|++||||++++|+.+..+++.|||+|.+.+..|+++|+.+|+.+.
T Consensus       236 ~~p~~~s~~~~~li~~lL~~dp~~R~~~----~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~d~~~f~~~~~~~~  311 (345)
T 1xjd_A          236 FYPRWLEKEAKDLLVKLFVREPEKRLGV----RGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEK  311 (345)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSBTT----BSCGGGSGGGTTCCHHHHHTTCSCC-----------------------
T ss_pred             CCCcccCHHHHHHHHHHhcCCHhHcCCC----hHHHHcCccccCCCHHHHhhCCCCCCcCCCCCCcchhhhcchhhcccC
Confidence            4678899999999999999999999996    139999999999999999999999999999999999999999998877


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      +..++.. ........+..|.||+|+++.
T Consensus       312 ~~~~~~~-~~~~~~~~~~~f~~f~~~~~~  339 (345)
T 1xjd_A          312 PRLSFAD-RALINSMDQNMFRNFSFMNPG  339 (345)
T ss_dssp             ----------------CCTTTTCCC----
T ss_pred             ccCCccc-ccccccccccccCCCeeeChh
Confidence            6655432 122233467899999999875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.83  E-value=5.1e-21  Score=138.23  Aligned_cols=108  Identities=30%  Similarity=0.573  Sum_probs=89.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..+|.++++||++||++||.+|+++.. .|+.+|++||||++++|+.+.++++.|||+|.+.+..|+++|+.+++.+
T Consensus       237 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~  316 (345)
T 3a8x_A          237 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNE  316 (345)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCTTTCGGGSCHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccC
Confidence            578889999999999999999999999742 3679999999999999999999999999999999999999999989887


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      ....++... .......+..|.||||+++.
T Consensus       317 ~~~~~~~~~-~~~~~~~~~~f~~f~~~~~~  345 (345)
T 3a8x_A          317 PVQLTPDDD-DIVRKIDQSEFEGFEYINPL  345 (345)
T ss_dssp             CSSCCCCCH-HHHTTSCGGGGTTCCEECCC
T ss_pred             cccCCCccc-cccccccccccCCCEeeCCC
Confidence            665554321 01112356789999999873

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.76  E-value=1.1e-18  Score=128.93  Aligned_cols=104  Identities=26%  Similarity=0.314  Sum_probs=81.0

Q ss_pred             CCCC--CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccC
Q psy3349           2 DDKR--FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTS   79 (111)
Q Consensus         2 ~~p~--~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~   79 (111)
                      .+|.  .+|.++++||++||+.+| +|+|.  .++.+|++||||++++|+.+..+++.|||+|.+.+..|++|||..++.
T Consensus       293 ~~p~~~~~s~~~~~li~~lL~~~~-~rlgR--~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~~~~d~~~fd~~~~~  369 (410)
T 3v8s_A          293 TFPDDNDISKEAKNLICAFLTDRE-VRLGR--NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEED  369 (410)
T ss_dssp             CCCTTCCCCHHHHHHHHHHSSCGG-GCTTS--SCHHHHHTSGGGCCSSCCSTTGGGSCCSCCCCCSSTTCCTTSCCCCSC
T ss_pred             cCCCcccccHHHHHHHHHHccChh-hhCCC--CCHHHHhcCccccCCCHHHHhhcccCCCCCCcCCCccchhhcCCcccc
Confidence            3554  699999999999999555 55542  358999999999999999999999999999999999999999987766


Q ss_pred             CCCCCCCCCCCCCCChhhcCCCCCceeccCC
Q psy3349          80 EKPELTPPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      .....+.+...  .....+..|.||||+++.
T Consensus       370 ~~~~~~~~~~~--~~~~~~~~f~~f~~~~~~  398 (410)
T 3v8s_A          370 KGEEETFPIPK--AFVGNQLPFVGFTYYSNR  398 (410)
T ss_dssp             CSCCCCCCCCS--SCCCTTGGGTTCCEECC-
T ss_pred             ccccccCCCch--hhcccccccccceEeCcc
Confidence            54443332221  112357889999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.75  E-value=4.4e-18  Score=123.11  Aligned_cols=95  Identities=23%  Similarity=0.498  Sum_probs=80.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||+.||.+|+++...++.+|++||||.+++|+.+.++++.|||+|.+.+..|+++|+ +++.+.
T Consensus       256 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~f~-~~~~~~  334 (350)
T 1rdq_E          256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD-DYEEEE  334 (350)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSC-CCCCCC
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCcccccccc-cccccc
Confidence            5788899999999999999999999997777899999999999999999999999999999999999999999 566655


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCc
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDF  104 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~F  104 (111)
                      ...+..       ...+..|.||
T Consensus       335 ~~~~~~-------~~~~~~f~~f  350 (350)
T 1rdq_E          335 IRVSIN-------EKCGKEFTEF  350 (350)
T ss_dssp             CCCCSS-------CCSTTTTTTC
T ss_pred             cccCCC-------cchhhhcCCC
Confidence            433321       2245678877

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.73  E-value=4.7e-18  Score=125.71  Aligned_cols=101  Identities=25%  Similarity=0.329  Sum_probs=68.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPEL   84 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~   84 (111)
                      ..+|.++++||++||+ +|.+|+|.  .++++|++||||+++||+.+.  ...|||+|.+.+..|++|||..........
T Consensus       296 ~~~s~~~~dli~~lL~-~p~~Rlgr--~~~~ei~~Hpff~~i~w~~l~--~~~~p~~p~~~~~~d~~~f~~~~~~~~~~~  370 (412)
T 2vd5_A          296 EGVPEEARDFIQRLLC-PPETRLGR--GGAGDFRTHPFFFGLDWDGLR--DSVPPFTPDFEGATDTCNFDLVEDGLTAMV  370 (412)
T ss_dssp             -CCCHHHHHHHHTTSS-CGGGCTTT--TTHHHHHTSGGGTTCCSTTST--TSCCSCCCC-----CCSSCC--CCCCCTTS
T ss_pred             cCCCHHHHHHHHHHcC-ChhhcCCC--CCHHHHhcCCCcCCCCHHHHh--hcCCCCCCcCCCcccccccCcccccccccc
Confidence            5699999999999999 99999984  478999999999999999984  578999999999999999997543322111


Q ss_pred             C-----CCCCCCCCChhhcCCCCCceeccCC
Q psy3349          85 T-----PPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        85 ~-----~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      +     ............+..|.||||+++.
T Consensus       371 ~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~  401 (412)
T 2vd5_A          371 SGGGETLSDIREGAPLGVHLPFVGYSYSCMA  401 (412)
T ss_dssp             SSSSCCTTTC-----CCTTGGGTTCCBSCCC
T ss_pred             cccCCCcccccCCCccccCCCCCCCcccCcc
Confidence            0     0000001111345679999999763

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.73  E-value=3e-18  Score=127.60  Aligned_cols=100  Identities=30%  Similarity=0.489  Sum_probs=69.8

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPELT   85 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~   85 (111)
                      .+|+++++||++||+.+|. |++.  .++++|++||||+++||+.+  +++.|||+|.+.+..|+++||.+++......+
T Consensus       308 ~~s~~~~dLi~~lL~~~~~-r~~r--~~~~eil~Hpff~~i~w~~l--~~~~~p~~P~~~~~~d~~~fd~~~~~~~~~~~  382 (437)
T 4aw2_A          308 DVSENAKDLIRRLICSREH-RLGQ--NGIEDFKKHPFFSGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVDDDCLKNSET  382 (437)
T ss_dssp             CSCHHHHHHHHTTSSCGGG-CTTT--TTTHHHHTSGGGTTCCTTTG--GGSCCSCCCCCSSTTCCTTSCCC---------
T ss_pred             cCCHHHHHHHHHHhccccc-ccCC--CCHHHHhCCCccCCCCHHHH--hhCCCCCCCcCCCccchhhcCCcccccccccC
Confidence            4899999999999997665 4442  34799999999999999998  57889999999999999999987765544333


Q ss_pred             CCCCCCCCChhhcCCCCCceeccCC
Q psy3349          86 PPKDPRPLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        86 ~~~~~~~~~~~~~~~F~~Fsy~~~~  110 (111)
                      .+..........+..|.||||++++
T Consensus       383 ~~~~~~~~~~~~~~~f~~~~~~~~~  407 (437)
T 4aw2_A          383 MPPPTHTAFSGHHLPFVGFTYTSSC  407 (437)
T ss_dssp             ---------CCTTGGGTTCCEESSC
T ss_pred             CCCCccccccccCccccCCCcCCch
Confidence            2211111122345689999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.71  E-value=2.1e-17  Score=118.10  Aligned_cols=97  Identities=30%  Similarity=0.583  Sum_probs=67.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccC-CCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVT-DVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~-~~~d~~~f~~~~~~~   80 (111)
                      .+|..++.++++||++||+++|.+|+|+...++++|++||||++++|+.+..+.+.|||.|.+. ...|+++|+. +..+
T Consensus       221 ~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~d~~~f~~-~~~~  299 (318)
T 1fot_A          221 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDK-YPEE  299 (318)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC-----------------
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHHhCCCCCCCCCCcCCCccchhhcCC-CCcc
Confidence            5788899999999999999999999987767899999999999999999999999999999987 4789999996 3333


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCc
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDF  104 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~F  104 (111)
                      ......     ...+..+..|.||
T Consensus       300 ~~~~~~-----~~~~~~~~~f~~f  318 (318)
T 1fot_A          300 DINYGV-----QGEDPYADLFRDF  318 (318)
T ss_dssp             CCCTTC-----CSCCTTGGGSCCC
T ss_pred             ccccCc-----cCCchhhhhccCC
Confidence            222111     1122345678887

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.67  E-value=1.3e-16  Score=118.18  Aligned_cols=79  Identities=35%  Similarity=0.684  Sum_probs=67.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..+++++++||++||+.||.+|+|+....+.++++||||.+++|+.+..+++.|||+|.+.+..|+++|+++|+.+
T Consensus       367 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~~~~~~~~~~~~~~~~  445 (446)
T 4ejn_A          367 RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ  445 (446)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCSSTTCCTTC-------
T ss_pred             CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCCccCCCCCccchhhcchhhhcC
Confidence            4788899999999999999999999976656789999999999999999999999999999999999999999999865

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.67  E-value=9.8e-17  Score=114.89  Aligned_cols=61  Identities=31%  Similarity=0.737  Sum_probs=57.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      .+|..+|+++++||++||++||++|+++...+++++++||||+++||+.+.+++++|||+|
T Consensus       244 ~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          244 GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            5788999999999999999999999998666789999999999999999999999999998

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.60  E-value=1e-15  Score=109.22  Aligned_cols=85  Identities=41%  Similarity=0.764  Sum_probs=58.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..++.++++||++||+.+|.+|+++...++.++++||||++++|+.+..+.+.||+.|.+.+..++++|+.+++...
T Consensus       239 ~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~  318 (327)
T 3a62_A          239 NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQT  318 (327)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC------------------
T ss_pred             CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCCCCCCcCChhhhhhcchhhhccc
Confidence            46788999999999999999999999886667899999999999999999999999999999999899999999888776


Q ss_pred             CCCCC
Q psy3349          82 PELTP   86 (111)
Q Consensus        82 ~~~~~   86 (111)
                      +..++
T Consensus       319 ~~~~~  323 (327)
T 3a62_A          319 PVDSP  323 (327)
T ss_dssp             -----
T ss_pred             cCCCC
Confidence            65554

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.60  E-value=5.2e-16  Score=118.48  Aligned_cols=95  Identities=24%  Similarity=0.511  Sum_probs=74.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCC-----CCCCCCCCcc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTD-----VGDVSNFDEE   76 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~-----~~d~~~f~~~   76 (111)
                      .+|..+|.++++||++||++||.+|+|+..+++.+|++||||++++|..+..+.+.|||+|....     ..|+.+|+..
T Consensus       411 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~~~~~~~~~~d~~~f~~~  490 (543)
T 3c4z_A          411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTV  490 (543)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCSSSCCSCC----CCCC--
T ss_pred             CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCCCccccccCCchhhhhcccc
Confidence            47888999999999999999999999987668899999999999999999999999999998642     3445555531


Q ss_pred             ccCCCCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          77 FTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                         .         .......++..|.+|++.+
T Consensus       491 ---~---------~~~~~~~~~~~f~~f~~~~  510 (543)
T 3c4z_A          491 ---K---------GVAFEKADTEFFQEFASGT  510 (543)
T ss_dssp             -------------CCCCCHHHHHHHHHHCCEE
T ss_pred             ---C---------CCCCCcchhhHhhcCCCCC
Confidence               0         0112345678899999865

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.47  E-value=4.9e-14  Score=108.30  Aligned_cols=64  Identities=25%  Similarity=0.455  Sum_probs=59.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVT   65 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~   65 (111)
                      .+|..+|.++++||++||++||.+|+|+..+++.+|++||||++++|+.+..+.+.|||+|...
T Consensus       407 ~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~~  470 (576)
T 2acx_A          407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQ  470 (576)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCCcc
Confidence            4678899999999999999999999998666889999999999999999999999999999764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.40  E-value=6.6e-13  Score=97.36  Aligned_cols=71  Identities=25%  Similarity=0.486  Sum_probs=61.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      .+|..++.++++||++||..+|.+|+++    +.+|++||||.+++|+.+.++++.|||+|...    ..+++..|+.+
T Consensus       238 ~~p~~~s~~~~~li~~lL~~dP~~R~s~----~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~~~----~~~~~~~~~~~  308 (384)
T 4fr4_A          238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQ----LSDVQNFPYMNDINWDAVFQKRLIPGFIPNKG----RLNCDPTFELE  308 (384)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCS----HHHHHTSGGGTTCCHHHHHTTCSCCCCCCSCC----SSCCCCCCCST
T ss_pred             CCCCcCCHHHHHHHHHHhcCCHhHhccc----HHHHHcChhhhcCCHHHHHhCCCCCCCCCCCC----CCCCCCccChh
Confidence            4788899999999999999999999985    79999999999999999999999999999864    34555555444

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.39  E-value=2.4e-13  Score=97.59  Aligned_cols=58  Identities=26%  Similarity=0.411  Sum_probs=48.3

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCc
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPF   60 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~   60 (111)
                      +.+|..+|+++++||++||++||++|+++.. .+..+|++||||++|||+.|.++.  ||.
T Consensus       251 ~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~--pP~  309 (311)
T 4aw0_A          251 YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQT--PPK  309 (311)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSC--CCC
T ss_pred             CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCCC--CCC
Confidence            3578899999999999999999999999732 245568999999999999997543  553

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.36  E-value=1.4e-12  Score=94.02  Aligned_cols=72  Identities=36%  Similarity=0.710  Sum_probs=62.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNF   73 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f   73 (111)
                      .+|..++..+++||++||..||.+|+++....+.++++|+||..++|+.+..+++++|+.|.+++..|+++|
T Consensus       284 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~p~~p~~~~~~d~~~~  355 (355)
T 1vzo_A          284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF  355 (355)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CCC---
T ss_pred             CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCCCCCCCccccccccccC
Confidence            356789999999999999999999998755568999999999999999999999999999999888888776

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=98.79  E-value=3.5e-09  Score=77.04  Aligned_cols=38  Identities=26%  Similarity=0.441  Sum_probs=34.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      ..+|++|+|||++||+.||++|++     ++|+++||||++|+
T Consensus       323 ~~is~~a~DLl~~lL~~dP~~R~t-----a~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          323 NEVPDEAYDLLDKLLDLNPASRIT-----AEEALLHPFFKDMS  360 (361)
T ss_dssp             TTCCHHHHHHHHHHTCSCTTTSCC-----HHHHHTSGGGTTC-
T ss_pred             ccCCHHHHHHHHHHCcCChhHCcC-----HHHHhcCcccCCCC
Confidence            458999999999999999999998     59999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.69  E-value=1.4e-08  Score=75.11  Aligned_cols=53  Identities=17%  Similarity=0.312  Sum_probs=44.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      +.++.++++||++||+.||.+|++     +.++++||||++++|..++.....+...|
T Consensus       367 ~~~s~~~~dLl~~mL~~dP~~R~t-----~~e~L~Hp~f~~~~~~~~e~~~~~~~~~~  419 (458)
T 3rp9_A          367 PASSADAIHLLKRMLVFNPNKRIT-----INECLAHPFFKEVRIAEVETNATEKVRLP  419 (458)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSGGGTTTCCGGGCCCCSSCCCCS
T ss_pred             CCCCHHHHHHHHHHhccCccccCC-----HHHHhcCHhhhhcCCCccCCCCCCCCCCC
Confidence            346999999999999999999998     59999999999999998865554444444

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.63  E-value=7.2e-10  Score=79.65  Aligned_cols=76  Identities=17%  Similarity=0.326  Sum_probs=53.7

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEKPE   83 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~   83 (111)
                      +..+|.++++||++||..||.+|++     +.++++||||.  +|+.+..+.+.+|+.|.........+|+..++...+.
T Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t-----~~~il~hp~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  319 (342)
T 2qr7_A          247 WNSVSDTAKDLVSKMLHVDPHQRLT-----AALVLRHPWIV--HWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPV  319 (342)
T ss_dssp             TTTSCHHHHHHHHHHTCSSTTTSCC-----HHHHTTSHHHH--TGGGSCCSCCCCCCCHHHHHHHHHHHHHHHTTTC---
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcC-----HHHHhcCCeec--CccccccccCCCccchhhhhhHHHHHHhhhcccCCCC
Confidence            3568999999999999999999998     59999999994  6998888888888887643222223444444444444


Q ss_pred             CCC
Q psy3349          84 LTP   86 (111)
Q Consensus        84 ~~~   86 (111)
                      .++
T Consensus       320 ~~p  322 (342)
T 2qr7_A          320 LEP  322 (342)
T ss_dssp             ---
T ss_pred             CCC
Confidence            333

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.54  E-value=5.7e-08  Score=71.58  Aligned_cols=44  Identities=14%  Similarity=0.417  Sum_probs=39.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLH   53 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~   53 (111)
                      +.+++++++||++||+.||.+|++     +.++++||||++++|...+.
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~~~~~e~  375 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRIT-----IDQALDHPYLKDVRKKKLEN  375 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCC-----HHHHHTCGGGTTTCCTTTC-
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCC-----HHHHhcChhhhhccCcccCc
Confidence            458999999999999999999998     59999999999999987654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.48  E-value=4.5e-08  Score=68.95  Aligned_cols=38  Identities=18%  Similarity=0.357  Sum_probs=35.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+|..+|+++++||++||++||++|++     +.++++||||+
T Consensus       230 ~~p~~~s~~~~~li~~~L~~dP~~R~s-----~~eil~hpw~k  267 (275)
T 3hyh_A          230 TLPKFLSPGAAGLIKRMLIVNPLNRIS-----IHEIMQDDWFK  267 (275)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCC-----HHHHHHCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcC-----HHHHHcCcccc
Confidence            578889999999999999999999998     59999999997

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.48  E-value=6.7e-08  Score=68.53  Aligned_cols=38  Identities=21%  Similarity=0.582  Sum_probs=36.2

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ++.++++||++||+.||.+|++     +.++++||||++++|+
T Consensus       291 ~~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          291 LDDEGLDLLTAMLEMDPVKRIS-----AKNALEHPYFSHNDFD  328 (329)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSGGGSSSCSC
T ss_pred             cCHHHHHHHHHHccCChhhCCC-----HHHHhCCcccCCCCCC
Confidence            7899999999999999999998     5999999999999996

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=98.45  E-value=1.5e-07  Score=69.27  Aligned_cols=38  Identities=18%  Similarity=0.246  Sum_probs=34.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .+|++|+|||++||++||.+|++     +.++++||||+.+..
T Consensus       316 ~~s~~~~dLl~~mL~~dP~~R~t-----a~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          316 GADRQALSLLGRMLRFEPSARIS-----AAAALRHPFLAKYHD  353 (398)
T ss_dssp             TCCHHHHHHHHHHSCSSTTTSCC-----HHHHTTSGGGTTTCC
T ss_pred             CCCHHHHHHHHHHCcCChhHCcC-----HHHHhcCHhhCcCCC
Confidence            57999999999999999999998     599999999997654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.44  E-value=1.4e-07  Score=66.45  Aligned_cols=40  Identities=18%  Similarity=0.407  Sum_probs=36.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..+++++++||++||+.||.+|++     +.++++||||++++++
T Consensus       271 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~f~~~~~~  310 (311)
T 3niz_A          271 PGFCQEGIDLLSNMLCFDPNKRIS-----ARDAMNHPYFKDLDPQ  310 (311)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTSCC-----HHHHHTSGGGTTSCTT
T ss_pred             cccCHHHHHHHHHHcCCChhHCCC-----HHHHhcCcccccCCcc
Confidence            357899999999999999999998     5999999999998864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.42  E-value=1.7e-07  Score=67.76  Aligned_cols=53  Identities=25%  Similarity=0.313  Sum_probs=39.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC---ChhHHhcCCCCCCcccc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI---QWEELLHRRVKPPFVPT   63 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i---~w~~l~~~~~~pp~~p~   63 (111)
                      .+++++++||++||+.||.+|++     +.++++||||+.+   +|+....+.+.+|+.+.
T Consensus       300 ~~~~~~~dll~~~L~~dP~~R~t-----~~e~l~Hp~~~~~~~~~~~~~~~~~~~~~~~~~  355 (388)
T 3oz6_A          300 DCNEEALDLLDKLLQFNPNKRIS-----ANDALKHPFVSIFHNPNEEPNCDHIITIPINDN  355 (388)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCC-----HHHHTTSTTTTTTCCGGGCCCCSSCCCCC----
T ss_pred             cCCHHHHHHHHHhhccCcccCCC-----HHHHhCCHHHHHhcCCccCCCCCCCCCCCcccc
Confidence            67999999999999999999998     5999999998754   45544444555555543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.38  E-value=1.4e-07  Score=68.31  Aligned_cols=44  Identities=14%  Similarity=0.278  Sum_probs=39.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLH   53 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~   53 (111)
                      ..+|.++++||++||..||.+|++     +.++++||||.+++|.....
T Consensus       243 ~~~s~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~~~~~~~~  286 (361)
T 2yab_A          243 SQTSELAKDFIRKLLVKETRKRLT-----IQEALRHPWITPVDTQQAMV  286 (361)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCC-----HHHHHTSTTTSCSSHHHHHH
T ss_pred             cCCCHHHHHHHHHHCCCChhHCcC-----HHHHhcCcCcCCCchhhhhh
Confidence            468999999999999999999998     59999999999999976543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.35  E-value=2.2e-07  Score=67.49  Aligned_cols=37  Identities=22%  Similarity=0.255  Sum_probs=33.9

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..+|+++++||++||++||++|++     +.|+++||||+.
T Consensus       293 ~~~~s~~~~dli~~~L~~dP~~R~t-----a~e~l~Hp~~~~  329 (346)
T 4fih_A          293 LHKVSPSLKGFLDRLLVRDPAQRAT-----AAELLKHPFLAK  329 (346)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTCGGGGG
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcC-----HHHHhcCHhhcC
Confidence            3568999999999999999999998     599999999984

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=98.34  E-value=2.2e-07  Score=71.20  Aligned_cols=41  Identities=15%  Similarity=0.197  Sum_probs=37.8

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..+|++|+|||++||++||.+|++     +.++++||||+..+|..
T Consensus       381 ~~~s~~~~dli~~~L~~dp~~R~t-----~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          381 SGISEDGKDFIRKLLLADPNTRMT-----IHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHHSTTTSCCCCTT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcC-----HHHHhcCcCcCCCCCCC
Confidence            468999999999999999999998     59999999999998864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.34  E-value=2.9e-07  Score=65.19  Aligned_cols=46  Identities=28%  Similarity=0.440  Sum_probs=39.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRR   55 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~   55 (111)
                      ..++..+++||++||+.+|.+|++     +.++++||||++++|+.+....
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~~ll~h~~~~~~~~~~~~~~~  303 (327)
T 3lm5_A          258 SSVSQLATDFIQSLLVKNPEKRPT-----AEICLSHSWLQQWDFENLFHPE  303 (327)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCC-----HHHHTTCGGGCCCCTTCC----
T ss_pred             cccCHHHHHHHHHHcCCChhhCcC-----HHHHhCCHhhcccccccccCcc
Confidence            458999999999999999999998     5999999999999998765433

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.32  E-value=2.2e-07  Score=65.92  Aligned_cols=39  Identities=15%  Similarity=0.229  Sum_probs=32.7

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      .++++++||++||++||.+|++     +.+|++||||++++|..
T Consensus       252 ~~~~~~~li~~~L~~dP~~Rps-----~~eil~h~~~~~~~~p~  290 (299)
T 4g31_A          252 KYPCEYVMVQDMLSPSPMERPE-----AINIIENAVFEDLDFPG  290 (299)
T ss_dssp             HCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSGGGCCC----
T ss_pred             cCHHHHHHHHHHcCCChhHCcC-----HHHHhcCHhhCCCCCCC
Confidence            5678899999999999999998     59999999999999953

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.32  E-value=2.5e-07  Score=65.09  Aligned_cols=38  Identities=24%  Similarity=0.395  Sum_probs=34.6

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      +++++++||++||+.||.+|++     +.++++||||.++.|+
T Consensus       292 ~~~~~~~li~~~L~~dP~~Rpt-----a~e~l~hp~f~~~~~~  329 (330)
T 3nsz_A          292 VSPEALDFLDKLLRYDHQSRLT-----AREAMEHPYFYTVVKD  329 (330)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCC-----HHHHHTSGGGTTCC--
T ss_pred             CCHHHHHHHHHHhcCCcccCCC-----HHHHhcCccHhhhccC
Confidence            7999999999999999999998     5999999999999876

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.32  E-value=3.9e-07  Score=63.59  Aligned_cols=48  Identities=23%  Similarity=0.286  Sum_probs=35.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVK   57 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~   57 (111)
                      ..++.++++||++||..||.+|++     +.++++||||+++.|.....+...
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~f~~~~~~~~~~~~~~  302 (311)
T 4agu_A          255 PNISYPALGLLKGCLHMDPTERLT-----CEQLLHHPYFENIREIEDLAKEHD  302 (311)
T ss_dssp             TTCCHHHHHHHHHHCCSSTTTSCC-----HHHHHTSGGGTTCC----------
T ss_pred             ccccHHHHHHHHHHccCChhhcCC-----HHHHhcChHHHhccCHHHHHHhhc
Confidence            358899999999999999999998     599999999999988765544443

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.28  E-value=5.3e-07  Score=67.09  Aligned_cols=38  Identities=21%  Similarity=0.267  Sum_probs=34.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+..+|+++++||++||++||.+|++     +.|+++||||+.
T Consensus       369 ~~~~~s~~~~dli~~~L~~dP~~R~t-----a~ell~Hp~~~~  406 (423)
T 4fie_A          369 NLHKVSPSLKGFLDRLLVRDPAQRAT-----AAELLKHPFLAK  406 (423)
T ss_dssp             CTTSSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTCGGGGG
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcC-----HHHHhcCHHhcC
Confidence            34579999999999999999999998     599999999984

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.27  E-value=6.8e-07  Score=62.00  Aligned_cols=37  Identities=24%  Similarity=0.491  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||+++
T Consensus       253 ~~~~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~f~~~  289 (292)
T 3o0g_A          253 PKLNATGRDLLQNLLKCNPVQRIS-----AEEALQHPYFSDF  289 (292)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGTTC
T ss_pred             cccChHHHHHHHHHhccChhhCCC-----HHHHhcCcccccC
Confidence            458999999999999999999998     5999999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.26  E-value=6.1e-07  Score=65.35  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=37.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      +..+++++++||++||+.||.+|++     +.+++.||||.++.|..
T Consensus       291 ~~~~~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          291 RPRTPPDAIDLISRLLEYTPSARLT-----AIEALCHPFFDELRTGE  332 (394)
T ss_dssp             CTTCCHHHHHHHHHHCCSSGGGSCC-----HHHHHTSGGGSTTTSSC
T ss_pred             cccCCHHHHHHHHHHhCCChhhCCC-----HHHHhcChhhhhhcccc
Confidence            4458999999999999999999998     59999999999988754

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.26  E-value=4.2e-07  Score=64.40  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=33.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++..+++++++||.+||++||.+|++     +.++++||||+.
T Consensus       251 ~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~Hp~~~~  288 (290)
T 3fpq_A          251 FDKVAIPEVKEIIEGCIRQNKDERYS-----IKDLLNHAFFQE  288 (290)
T ss_dssp             GGGCCCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGC-
T ss_pred             CCccCCHHHHHHHHHHccCChhHCcC-----HHHHhcCccccC
Confidence            34568899999999999999999997     599999999984

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.24  E-value=1.1e-06  Score=62.18  Aligned_cols=43  Identities=30%  Similarity=0.515  Sum_probs=39.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELL   52 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~   52 (111)
                      ..++.++++||++||+.+|.+|++     +.++++||||.+++|..+.
T Consensus       293 ~~~~~~l~~li~~~L~~dP~~Rps-----~~e~l~hp~f~~~~~~~~~  335 (348)
T 2pml_X          293 NFLSNEDIDFLKLFLRKNPAERIT-----SEDALKHEWLADTNIEDLR  335 (348)
T ss_dssp             -CCCHHHHHHHHHHCCSSGGGSCC-----HHHHHTSGGGTTCCHHHHH
T ss_pred             hhcCHHHHHHHHHHccCChhhCCC-----HHHHhcCccccCCCHHHHH
Confidence            568999999999999999999998     5999999999999998764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.22  E-value=1.6e-06  Score=61.80  Aligned_cols=42  Identities=17%  Similarity=0.086  Sum_probs=37.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .+|..+|.++++||++||..||.+|++     +.+|++||||....+
T Consensus       232 ~~p~~~s~~~~~li~~~L~~dP~~R~t-----~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          232 RIPFYMSTDCENLLKRFLVLNPIKRGT-----LEQIMKDRWINAGHE  273 (328)
T ss_dssp             CCCTTSCHHHHHHHHHHCCSSTTTSCC-----HHHHTTCTTTTTTCT
T ss_pred             CCCCCCCHHHHHHHHHHCCCChhHCcC-----HHHHhcCHhhcCCCc
Confidence            467789999999999999999999998     599999999986543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.22  E-value=5.7e-07  Score=63.48  Aligned_cols=45  Identities=16%  Similarity=0.228  Sum_probs=36.7

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVK   57 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~   57 (111)
                      +.++++||++||..||.+|++     +.++++||||.+++|+....+...
T Consensus       307 ~~~l~~li~~~L~~dP~~Rpt-----~~e~l~hp~f~~~~~~~~~~~~~~  351 (355)
T 2eu9_A          307 HVQLFDLMRRMLEFDPAQRIT-----LAEALLHPFFAGLTPEERSFHTSR  351 (355)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCC-----HHHHTTSGGGGGCCHHHHC-----
T ss_pred             HHHHHHHHHHHhcCChhhCcC-----HHHHhcChhhcCCChhhccccccC
Confidence            468899999999999999998     599999999999999876544433

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.20  E-value=7.9e-07  Score=64.22  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ++..+++++++||++||+.||.+|++     +.++++||||+.+.|.
T Consensus       302 ~~~~~s~~~~~li~~~L~~dP~~Rpt-----a~ell~hp~f~~~~~~  343 (389)
T 3gni_B          302 YHRTFSPHFHHFVEQCLQRNPDARPS-----ASTLLNHSFFKQIKRR  343 (389)
T ss_dssp             ----CCHHHHHHHHHHTCSCTTTSCC-----HHHHTTSGGGGGC---
T ss_pred             cccccCHHHHHHHHHHhhcCcccCCC-----HHHHhcCHHHHHHhhc
Confidence            45568999999999999999999998     5999999999998774

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.20  E-value=1.1e-06  Score=60.96  Aligned_cols=38  Identities=21%  Similarity=0.517  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||++.|
T Consensus       251 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~e~l~hp~f~~~n  288 (288)
T 1ob3_A          251 KGLDESGIDLLSKMLKLDPNQRIT-----AKQALEHAYFKENN  288 (288)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSGGGGC--
T ss_pred             hhcCHHHHHHHHHHcCCCcccCCC-----HHHHhcCcchhhcC
Confidence            458999999999999999999998     59999999998753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.15  E-value=2.3e-06  Score=61.31  Aligned_cols=37  Identities=16%  Similarity=0.334  Sum_probs=34.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||...
T Consensus       284 ~~~~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~~  320 (364)
T 3qyz_A          284 PNADSKALDLLDKMLTFNPHKRIE-----VEQALAHPYLEQY  320 (364)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCC-----HHHHhcCcchhhc
Confidence            457899999999999999999998     5999999999975

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.14  E-value=1.2e-06  Score=61.65  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=35.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHH
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEEL   51 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l   51 (111)
                      .++.++++||++||+.||.+|++     +.++++||||+++.|.+.
T Consensus       265 ~~~~~l~~li~~~L~~dP~~Rpt-----~~e~l~hp~f~~~~~~~~  305 (317)
T 2pmi_A          265 PLDGNLMDFLHGLLQLNPDMRLS-----AKQALHHPWFAEYYHHAS  305 (317)
T ss_dssp             CCCHHHHHHHHHHSCSSGGGSCC-----HHHHTTSGGGGGGCC---
T ss_pred             cCCHHHHHHHHHHCCCCcccCCC-----HHHHhCChhhhcccchhh
Confidence            57899999999999999999998     599999999998877654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.11  E-value=4.6e-07  Score=67.00  Aligned_cols=53  Identities=19%  Similarity=0.387  Sum_probs=42.9

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh---------hHHhcCCCCCCccccc
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW---------EELLHRRVKPPFVPTV   64 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w---------~~l~~~~~~pp~~p~~   64 (111)
                      .+..+++||++||+.||.+|++     +.+|++||||.+++|         +.+......+|+++.+
T Consensus       256 ~~~~~~~li~~~L~~dP~~Rps-----~~evl~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  317 (432)
T 3p23_A          256 EDVIARELIEKMIAMDPQKRPS-----AKHVLKHPFFWSLEKQLQFFQDVSDRIEKESLDGPIVKQL  317 (432)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCC-----HHHHHTSTTTCCHHHHHHHHHHHHHHCSCSCSSCHHHHHH
T ss_pred             ccHHHHHHHHHHHhCCHhhCCC-----HHHHHhCccccChHHHHHHHHHHHHHhhcccccchHHHHH
Confidence            4567999999999999999998     599999999999998         3444455666766654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.11  E-value=1.5e-06  Score=60.95  Aligned_cols=41  Identities=20%  Similarity=0.329  Sum_probs=37.0

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      +..++.++++||.+||..||.+|++     +.++++||||.++++.
T Consensus       266 ~~~~~~~~~~li~~~L~~dP~~Rpt-----~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          266 VTDIDELGKDLLLKCLTFNPAKRIS-----AYSALSHPYFQDLERC  306 (326)
T ss_dssp             CCSCCHHHHHHHHHHSCSSTTTSCC-----HHHHHTSGGGTTCCCC
T ss_pred             cccCCHHHHHHHHHHcCCCcccCCC-----HHHHhcCccccccchh
Confidence            3568999999999999999999998     5999999999988764

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.10  E-value=1.7e-06  Score=61.13  Aligned_cols=38  Identities=26%  Similarity=0.351  Sum_probs=34.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .++.++++||++||+.||.+|++     +.++++||||.++..
T Consensus       253 ~~~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          253 RLDSDGADLLTKLLQFEGRNRIS-----AEDAMKHPFFLSLGE  290 (324)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCC-----HHHHTTSGGGGGGCS
T ss_pred             CCCHHHHHHHHHHcCcCcccCCC-----HHHHhcChhhhhccc
Confidence            57899999999999999999998     599999999997654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.09  E-value=1.5e-06  Score=61.93  Aligned_cols=39  Identities=10%  Similarity=0.159  Sum_probs=34.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      +|..++.++++||++||+.||.+|++     +.++++||||.+.
T Consensus       302 ~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~f~~~  340 (373)
T 1q8y_A          302 FSKDEAKEISDFLSPMLQLDPRKRAD-----AGGLVNHPWLKDT  340 (373)
T ss_dssp             CCHHHHHHHHHHHGGGGCSSTTTCBC-----HHHHHTCGGGTTC
T ss_pred             CCcchHHHHHHHHHHHhccCccccCC-----HHHHhhChhhhcc
Confidence            34456789999999999999999998     5999999999963

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.08  E-value=1.6e-06  Score=63.64  Aligned_cols=41  Identities=17%  Similarity=0.234  Sum_probs=36.3

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      +..++.++++||++||+.||.+|++     +.+++.||||.++.+.
T Consensus       306 ~~~~~~~~~~Li~~~L~~dP~~R~t-----~~e~l~hp~f~~~~~~  346 (420)
T 1j1b_A          306 RPRTPPEAIALCSRLLEYTPTARLT-----PLEACAHSFFDELRDP  346 (420)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGGGGGCT
T ss_pred             CCCCCHHHHHHHHHhccCChhHCCC-----HHHHhCCHhhcccccc
Confidence            4567999999999999999999998     5999999999876654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.07  E-value=3e-06  Score=60.05  Aligned_cols=41  Identities=15%  Similarity=0.327  Sum_probs=37.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..++.++++||++||..||.+|++     +.++++||||..+.|..
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~~~~~  316 (353)
T 2b9h_A          276 PRVNPKGIDLLQRMLVFDPAKRIT-----AKEALEHPYLQTYHDPN  316 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGTTTCCTT
T ss_pred             ccCCHHHHHHHHHhcCcCcccCCC-----HHHHhcCccccccCCcc
Confidence            468999999999999999999998     59999999999887754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.07  E-value=3.6e-06  Score=60.60  Aligned_cols=41  Identities=17%  Similarity=0.254  Sum_probs=36.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..+++++++||++||+.||.+|++     +.++++||||..+....
T Consensus       294 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~f~~~~~~~  334 (371)
T 4exu_A          294 PRASPQAADLLEKMLELDVDKRLT-----AAQALTHPFFEPFRDPE  334 (371)
T ss_dssp             TTSCHHHHHHHHHHSCSCTTTSCC-----HHHHHTSGGGTTTCCGG
T ss_pred             cccChHHHHHHHHHCCCChhhcCC-----HHHHhcCcccccCCCcc
Confidence            457999999999999999999998     59999999999876543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.07  E-value=2.6e-06  Score=61.42  Aligned_cols=41  Identities=15%  Similarity=0.285  Sum_probs=35.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..+++++++||++||+.||.+|++     +.++++||||..+.+..
T Consensus       278 ~~~~~~~~~ll~~mL~~dP~~R~t-----~~e~l~hp~f~~~~~~~  318 (367)
T 1cm8_A          278 TNASPLAVNLLEKMLVLDAEQRVT-----AGEALAHPYFESLHDTE  318 (367)
T ss_dssp             TTCCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSGGGTTTC---
T ss_pred             CCCCHHHHHHHHHHccCChhHCCC-----HHHHhcChHHHhhcCCc
Confidence            457999999999999999999998     59999999999876543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.06  E-value=2.4e-06  Score=60.48  Aligned_cols=46  Identities=17%  Similarity=0.348  Sum_probs=40.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRR   55 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~   55 (111)
                      ..++.++++||++||..||.+|++     +.++++||||...+|.....+.
T Consensus       242 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~e~l~hp~~~~~~~~~~~~~~  287 (326)
T 2y0a_A          242 SNTSALAKDFIRRLLVKDPKKRMT-----IQDSLQHPWIKPKDTQQALSRK  287 (326)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCC-----HHHHHHSTTTSCCSHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCCC-----HHHHhcCCCccCCcchhhhhhh
Confidence            458999999999999999999998     5999999999999997655433

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.06  E-value=7.7e-06  Score=58.19  Aligned_cols=40  Identities=15%  Similarity=0.230  Sum_probs=35.9

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||..+...
T Consensus       276 ~~~~~~~~~li~~~L~~dp~~Rpt-----~~e~l~hp~f~~~~~~  315 (353)
T 3coi_A          276 PRASPQAADLLEKMLELDVDKRLT-----AAQALTHPFFEPFRDP  315 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSCTTTSCC-----HHHHHTSGGGTTTCCG
T ss_pred             CCcCHHHHHHHHHHcCCCcccCCC-----HHHHhcCcchhhccCc
Confidence            467999999999999999999998     5999999999976654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.06  E-value=2.9e-06  Score=58.47  Aligned_cols=51  Identities=25%  Similarity=0.408  Sum_probs=40.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      .+|..++.++++||++||..+|.+|++     +.++++||||+.      ..++..||..+.
T Consensus       230 ~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~ll~h~~~~~------~~~~~~p~~~~~  280 (284)
T 2vgo_A          230 KFPPFLSDGSKDLISKLLRYHPPQRLP-----LKGVMEHPWVKA------NSRRVLPPVYQS  280 (284)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCC-----HHHHHTCHHHHH------HCCCCCCCCC--
T ss_pred             CCCCcCCHHHHHHHHHHhhcCHhhCCC-----HHHHhhCHHHHh------hccccCCCcccc
Confidence            467789999999999999999999998     599999999984      234555555443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.06  E-value=2.9e-06  Score=59.22  Aligned_cols=40  Identities=18%  Similarity=0.264  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      .++.++++||++||..||.+|++     +.++++||||.+..|+.
T Consensus       267 ~~~~~~~~li~~~L~~dP~~Rps-----~~e~l~hp~~~~~~~~~  306 (316)
T 2ac3_A          267 HISCAAKDLISKLLVRDAKQRLS-----AAQVLQHPWVQGCAPEN  306 (316)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSTTCC------
T ss_pred             cCCHHHHHHHHHHhhCChhhCCC-----HHHHhcChhhcCCCCcc
Confidence            58899999999999999999998     59999999999877653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.05  E-value=1.6e-06  Score=63.03  Aligned_cols=38  Identities=13%  Similarity=0.165  Sum_probs=34.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +|..+|+++++||++||++||.+|++     +.++++||||..
T Consensus       245 ~~~~~s~~~~~li~~~L~~dP~~R~s-----~~e~l~hp~~~~  282 (350)
T 4b9d_A          245 VSLHYSYDLRSLVSQLFKRNPRDRPS-----VNSILEKGFIAK  282 (350)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSHHHHT
T ss_pred             CCccCCHHHHHHHHHHccCChhHCcC-----HHHHhcCHHhhc
Confidence            45679999999999999999999997     599999999974

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.04  E-value=3.6e-06  Score=58.22  Aligned_cols=38  Identities=21%  Similarity=0.412  Sum_probs=34.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .++.++++||++||..||.+|++     +.++++||||.++.+
T Consensus       255 ~~~~~~~~li~~~L~~dP~~Rpt-----~~~~l~hp~~~~~~~  292 (299)
T 2r3i_A          255 PLDEDGRSLLSQMLHYDPNKRIS-----AKAALAHPFFQDVTK  292 (299)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSGGGTTCCC
T ss_pred             CCCHHHHHHHHHhcCcCcccCCC-----HHHHhcChhhhcCCC
Confidence            47899999999999999999998     599999999997654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.03  E-value=2e-06  Score=60.56  Aligned_cols=45  Identities=16%  Similarity=0.324  Sum_probs=40.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHR   54 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~   54 (111)
                      ..++.++++||++||..+|.+|++     +.++++||||.+++|.....+
T Consensus       243 ~~~~~~~~~li~~~l~~dp~~Rps-----~~e~l~hp~~~~~~~~~~~~~  287 (321)
T 2a2a_A          243 SHTSELAKDFIRKLLVKETRKRLT-----IQEALRHPWITPVDNQQAMVR  287 (321)
T ss_dssp             TTCCHHHHHHHHTTSCSSTTTSCC-----HHHHHHSTTTSCSSHHHHHHH
T ss_pred             cccCHHHHHHHHHHcCCChhhCcC-----HHHHhcCccccCCCccccccc
Confidence            458899999999999999999998     599999999999999876543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.02  E-value=6.8e-06  Score=58.48  Aligned_cols=48  Identities=23%  Similarity=0.360  Sum_probs=39.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC------CCChhHHhcCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR------HIQWEELLHRR   55 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~------~i~w~~l~~~~   55 (111)
                      .|..+++++++||++||..+|.+|++     +.++++||||.      +++|+.+....
T Consensus       243 ~~~~~~~~l~~li~~~L~~dP~~Rps-----~~ell~hp~~~~~~~~~~~~~~~~~~~~  296 (335)
T 3dls_A          243 PPYLVSKELMSLVSGLLQPVPERRTT-----LEKLVTDPWVTQPVNLADYTWEEVFRVN  296 (335)
T ss_dssp             CSSCCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHCTTTTCCCCGGGCCHHHHC---
T ss_pred             CCcccCHHHHHHHHHHccCChhhCcC-----HHHHhcCccccCCccccccCHHHHhhhc
Confidence            45568999999999999999999998     59999999996      47888775433

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.02  E-value=4.6e-06  Score=57.63  Aligned_cols=44  Identities=25%  Similarity=0.386  Sum_probs=31.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLH   53 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~   53 (111)
                      ..++.++++||.+||..||.+|++     +.++++||||....+..+.+
T Consensus       258 ~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~h~~~~~~~~~~~~q  301 (303)
T 2vwi_A          258 KKYGKSFRKMISLCLQKDPEKRPT-----AAELLRHKFFQKAKNKEFLQ  301 (303)
T ss_dssp             CCCCHHHHHHHHHHCCSSGGGSCC-----HHHHHTSTTC----------
T ss_pred             hhhhHHHHHHHHHHccCChhhCcC-----HHHHhhChhhhcCCCCcccc
Confidence            457899999999999999999998     59999999999887765543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=97.99  E-value=1.2e-06  Score=63.14  Aligned_cols=49  Identities=10%  Similarity=0.238  Sum_probs=38.2

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccc
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPT   63 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~   63 (111)
                      +.++++||++||+.||.+|++     +.++++||||.....  .......+|.+|.
T Consensus       292 ~~~~~~li~~mL~~dP~~R~t-----~~e~l~hp~~~~~~~--~~~~~~~~~~~~~  340 (371)
T 2xrw_A          292 ASQARDLLSKMLVIDASKRIS-----VDEALQHPYINVWYD--PSEAEAPPPKIPD  340 (371)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCC-----HHHHHHSHHHHTTCC--HHHHTCCCCCCCT
T ss_pred             cHHHHHHHHHHCcCChhhCCC-----HHHHhCCcchhhhcC--ccccCCCCCCCCC
Confidence            678999999999999999998     599999999985332  2234455666655

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.99  E-value=1.7e-06  Score=60.16  Aligned_cols=41  Identities=15%  Similarity=0.247  Sum_probs=36.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||+.++|..
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          276 PGISREAVDFLEQILTFSPMDRLT-----AEEALSHPYMSIYSFPM  316 (320)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSCC-----HHHHHTSHHHHTTCC--
T ss_pred             chhhHHHHHHHHHHcCCCccccCC-----HHHHhCCcccccccCcc
Confidence            458999999999999999999998     59999999999888864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=97.98  E-value=1.4e-06  Score=62.56  Aligned_cols=41  Identities=17%  Similarity=0.066  Sum_probs=37.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..+++++++||.+||+.||.+|++     +.++++||||.++.|..
T Consensus       323 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          323 TPLPDFVKTLIGRFLNFDRRRRLL-----PLEAMETPEFLQLQNEI  363 (371)
T ss_dssp             SCCCHHHHHHHHHHTCSSTTTCCC-----HHHHTTSHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHcCCChhhCCC-----HHHHhcCHHHHHHHHHH
Confidence            468999999999999999999998     59999999999988864

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=97.98  E-value=6.2e-06  Score=57.11  Aligned_cols=44  Identities=25%  Similarity=0.177  Sum_probs=39.0

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELL   52 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~   52 (111)
                      +..++.++++||++||..+|.+|++     +.++++||||.++.|....
T Consensus       245 ~~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~h~~~~~~~~~~~~  288 (302)
T 2j7t_A          245 PSKWSVEFRDFLKIALDKNPETRPS-----AAQLLEHPFVSSITSNKAL  288 (302)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCC-----HHHHTTSTTTTTCCCCHHH
T ss_pred             ccccCHHHHHHHHHHcccChhhCCC-----HHHHhcChHHhhhccchhH
Confidence            4568999999999999999999998     5999999999999886543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=97.97  E-value=4.6e-06  Score=57.67  Aligned_cols=41  Identities=22%  Similarity=0.309  Sum_probs=35.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHH
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEEL   51 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l   51 (111)
                      .++.++++||.+||..+|.+|++     +.++++||||.+..|+.+
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~h~~~~~~~~~~~  295 (298)
T 1phk_A          255 DYSDTVKDLVSRFLVVQPQKRYT-----AEEALAHPFFQQYVVEEV  295 (298)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCC-----HHHHTTSGGGCTTC----
T ss_pred             ccCHHHHHHHHHHccCCcccCCC-----HHHHHhChHhhhccchhh
Confidence            58899999999999999999998     599999999999998876

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.94  E-value=9.3e-06  Score=55.90  Aligned_cols=45  Identities=16%  Similarity=0.258  Sum_probs=38.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhc
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLH   53 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~   53 (111)
                      +...+..+++||++||+.||.+|++     +.++++||||....++...+
T Consensus       253 ~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~h~~~~~~~~~~~~~  297 (303)
T 1zy4_A          253 DDNKMKVEKKIIRLLIDHDPNKRPG-----ARTLLNSGWLPVKHQDEVIK  297 (303)
T ss_dssp             CTTTSHHHHHHHHHHTCSSGGGSCC-----HHHHHHSSCSCCCCHHHHHH
T ss_pred             cccchHHHHHHHHHHHhcCcccCcC-----HHHHhCCCCcCCCChHHHHH
Confidence            3456778999999999999999998     59999999999888876643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=97.94  E-value=1.1e-05  Score=57.35  Aligned_cols=37  Identities=24%  Similarity=0.505  Sum_probs=33.9

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..+++.+++||.+||+.||.+|++     +.++++||||+.+
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~f~~~  323 (362)
T 3pg1_A          287 PTADPVALDLIAKMLEFNPQRRIS-----TEQALRHPYFESL  323 (362)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCC-----HHHHHcCchhhhc
Confidence            457899999999999999999998     5999999999976

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=97.93  E-value=3.9e-06  Score=60.56  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=30.0

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .++++||++||+.||.+|++     +.++++||||....|
T Consensus       347 ~~~~dli~~mL~~dP~~Rpt-----a~e~L~hp~f~~~~~  381 (382)
T 2vx3_A          347 LKFKDLILRMLDYDPKTRIQ-----PYYALQHSFFKKTAD  381 (382)
T ss_dssp             HHHHHHHHHHTCSCTTTSCC-----HHHHTTSGGGCC---
T ss_pred             HHHHHHHHHhcCCChhhCCC-----HHHHhcCcccccCCC
Confidence            47899999999999999998     599999999997654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.93  E-value=5e-06  Score=60.00  Aligned_cols=40  Identities=18%  Similarity=0.396  Sum_probs=35.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      +|..++.++++||++||+.+|.+|++     +.++++||||..+.
T Consensus       290 ~~~~~~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          290 LPEGTPSLAIDLLEQILRYEPDLRIN-----PYEAMAHPFFDHLR  329 (383)
T ss_dssp             SCTTCCHHHHHHHHHHCCSSGGGSCC-----HHHHHTSGGGHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCC-----HHHHhcCHHHHHHH
Confidence            45668999999999999999999998     59999999998654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=97.92  E-value=1e-05  Score=55.47  Aligned_cols=39  Identities=26%  Similarity=0.431  Sum_probs=34.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|..++.++++||++||..||.+|++     +.++++||||..
T Consensus       230 ~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~~l~h~~~~~  268 (278)
T 3cok_A          230 EMPSFLSIEAKDLIHQLLRRNPADRLS-----LSSVLDHPFMSR  268 (278)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCC-----HHHHTTSTTTC-
T ss_pred             CCccccCHHHHHHHHHHcccCHhhCCC-----HHHHhcCccccC
Confidence            356778999999999999999999998     599999999985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=97.92  E-value=8.2e-06  Score=56.88  Aligned_cols=37  Identities=22%  Similarity=0.312  Sum_probs=31.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.++++||.+||+.||.+|++     +.++++||||...
T Consensus       267 ~~~~~~~~~li~~~L~~dP~~R~t-----~~e~l~h~~~~~~  303 (308)
T 3g33_A          267 PEMEESGAQLLLEMLTFNPHKRIS-----AFRALQHSYLHKD  303 (308)
T ss_dssp             CSCCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSTTC---
T ss_pred             ccccHHHHHHHHHHhcCCCccCCC-----HHHHhcCccccCC
Confidence            358899999999999999999998     5999999999853

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.92  E-value=3.7e-06  Score=59.69  Aligned_cols=37  Identities=16%  Similarity=0.251  Sum_probs=33.6

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .+.++++||.+||+.||.+|++     +.++++||||.++.+
T Consensus       287 ~~~~~~~li~~~L~~dP~~Rpt-----~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          287 DAKEAYDLLSALLQYLPEERMK-----PYEALCHPYFDELHD  323 (360)
T ss_dssp             THHHHHHHHHHHTCSSGGGSCC-----HHHHTTSGGGGGGGC
T ss_pred             ccHHHHHHHHHHhccCccccCC-----HHHHhcCccccccCC
Confidence            5789999999999999999998     599999999997654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=97.92  E-value=1e-05  Score=55.26  Aligned_cols=39  Identities=21%  Similarity=0.222  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      +|..++.++++||++||..||.+|++     +.++++||||.+.
T Consensus       248 ~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~h~~~~~~  286 (289)
T 1x8b_A          248 IPQVLSQEFTELLKVMIHPDPERRPS-----AMALVKHSVLLSA  286 (289)
T ss_dssp             CSSCCCHHHHHHHHHHTCSSGGGSCC-----HHHHHTCTTC---
T ss_pred             CCcccCHHHHHHHHHHhCCCcccCCC-----HHHHhhChHhhhh
Confidence            56779999999999999999999998     5999999999853

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=97.90  E-value=6.2e-06  Score=59.94  Aligned_cols=38  Identities=16%  Similarity=0.302  Sum_probs=34.1

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .+.++++||++||+.||.+|++     +.++++||||.+..|.
T Consensus       306 ~~~~~~~Ll~~~L~~dP~~R~t-----a~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          306 PDSKAFHLLQKLLTMDPIKRIT-----SEQAMQDPYFLEDPLP  343 (405)
T ss_dssp             TTSHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGTSSSCC
T ss_pred             CCHHHHHHHHHHccCCcccCCC-----HHHHhcChhhccCCCC
Confidence            3789999999999999999998     5999999999986654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=97.90  E-value=3.7e-06  Score=60.24  Aligned_cols=39  Identities=10%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|..+|+++++||++||..||.+|++     +.+|++||||..
T Consensus       226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt-----~~eil~hp~~~~  264 (336)
T 3h4j_B          226 VMPDFLSPGAQSLIRRMIVADPMQRIT-----IQEIRRDPWFNV  264 (336)
T ss_dssp             CCCTTSCHHHHHHHHTTSCSSGGGSCC-----HHHHTTCHHHHT
T ss_pred             CCcccCCHHHHHHHHHHcCCChhHCcC-----HHHHHhChhhcc
Confidence            357789999999999999999999998     599999999974

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=97.89  E-value=8.2e-06  Score=57.46  Aligned_cols=43  Identities=12%  Similarity=0.147  Sum_probs=38.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ++..++.++++||++||..+|.+|++     +.+|++||||.++.+..
T Consensus       262 ~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~hp~~~~~~~~~  304 (320)
T 3a99_A          262 FRQRVSSECQHLIRWCLALRPSDRPT-----FEEIQNHPWMQDVLLPQ  304 (320)
T ss_dssp             CSSCCCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSGGGSSCCCHH
T ss_pred             ccccCCHHHHHHHHHHccCChhhCcC-----HHHHhcCHhhcCccCcc
Confidence            56778999999999999999999998     59999999999887654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=97.87  E-value=9.6e-06  Score=58.56  Aligned_cols=39  Identities=13%  Similarity=0.260  Sum_probs=34.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..++++++||++||+.||.+|++     +.++++||||..+...
T Consensus       283 ~~~~~~~dLl~~mL~~dP~~R~t-----~~e~L~hp~~~~~~~~  321 (367)
T 2fst_X          283 GANPLAVDLLEKMLVLDSDKRIT-----AAQALAHAYFAQYHDP  321 (367)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGTTTCCG
T ss_pred             CCCHHHHHHHHHhCCCCcccCcC-----HHHHhcChhhhhccCC
Confidence            46899999999999999999998     5999999999976544

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=97.87  E-value=1.2e-05  Score=59.17  Aligned_cols=35  Identities=17%  Similarity=0.262  Sum_probs=31.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++++++||++||+.||.+|++     +.++++||||+.
T Consensus       380 ~~~~~~~dli~~~L~~dP~~Rpt-----a~e~L~Hpw~~~  414 (429)
T 3kvw_A          380 CDDPLFLDFLKQCLEWDPAVRMT-----PGQALRHPWLRR  414 (429)
T ss_dssp             CCCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSTTTC-
T ss_pred             cchHHHHHHHHHHCCCChhhCCC-----HHHHhCChhhcc
Confidence            35889999999999999999998     599999999985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=97.85  E-value=5.6e-06  Score=60.74  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=38.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELL   52 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~   52 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||.+.+|....
T Consensus       370 ~~~~~~~~~li~~~L~~dP~~Rps-----~~e~l~hp~~~~~~~~~~~  412 (419)
T 3i6u_A          370 AEVSEKALDLVKKLLVVDPKARFT-----TEEALRHPWLQDEDMKRKF  412 (419)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSGGGCCHHHHHHH
T ss_pred             cccCHHHHHHHHHHccCChhHCcC-----HHHHhCCcccCChhHHHHH
Confidence            357999999999999999999998     5999999999998886543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=97.84  E-value=1.9e-06  Score=61.48  Aligned_cols=40  Identities=23%  Similarity=0.201  Sum_probs=35.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      .++.++++||++||+.||.+|++     +.++++||||++.+|+.
T Consensus       296 ~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~~~~~  335 (360)
T 3eqc_A          296 VFSLEFQDFVNKCLIKNPAERAD-----LKQLMVHAFIKRSDAEE  335 (360)
T ss_dssp             TSCHHHHHHHHHHHCSSTTTSCC-----HHHHHTSHHHHHHHHSC
T ss_pred             cccHHHHHHHHHHhhcChhhCCC-----HHHHhhChHhhcchHhh
Confidence            47899999999999999999998     59999999999766654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=97.84  E-value=3.5e-06  Score=60.35  Aligned_cols=36  Identities=14%  Similarity=0.133  Sum_probs=31.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ...+.++++||++||+.||.+|++     +.++++||||++
T Consensus       362 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~e~l~hp~~~~  397 (397)
T 1wak_A          362 QEEAAGFTDFLLPMLELIPEKRAT-----AAECLRHPWLNS  397 (397)
T ss_dssp             HHHHHHHHHHHGGGGCSSGGGSCC-----HHHHHTSGGGGC
T ss_pred             hhhHHHHHHHHHHHhccChhhcCC-----HHHHhhCccccC
Confidence            345678999999999999999998     599999999973

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=97.84  E-value=1.1e-05  Score=57.30  Aligned_cols=40  Identities=23%  Similarity=0.224  Sum_probs=35.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..++.++++||++||..||.+|++     +.++++||||.+..|.
T Consensus       262 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~h~~f~~~~~~  301 (346)
T 1ua2_A          262 SAAGDDLLDLIQGLFLFNPCARIT-----ATQALKMKYFSNRPGP  301 (346)
T ss_dssp             TTCCHHHHHHHHHHHCSSTTTSCC-----HHHHHTSGGGTSSSCC
T ss_pred             ccCCHHHHHHHHHHhccChhhCCC-----HHHHhcChhhhcCCCC
Confidence            456899999999999999999998     5999999999986654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=97.81  E-value=4.8e-06  Score=58.79  Aligned_cols=43  Identities=21%  Similarity=0.314  Sum_probs=38.1

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLH   53 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~   53 (111)
                      .++.++++||++||+.||.+|+++     .++++||||+..+|.....
T Consensus       278 ~~~~~l~~li~~~L~~dP~~Rpt~-----~ell~hp~f~~~~~~~~~~  320 (331)
T 4aaa_A          278 KLSEVVIDLAKKCLHIDPDKRPFC-----AELLHHDFFQMDGFAERFS  320 (331)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCG-----GGGGGSHHHHGGGHHHHHH
T ss_pred             chhHHHHHHHHHHhccCcccCCCH-----HHHhcCchhccCChhhhhh
Confidence            579999999999999999999984     9999999999888766543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=97.78  E-value=1.5e-05  Score=56.96  Aligned_cols=39  Identities=13%  Similarity=0.118  Sum_probs=35.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||.+..+
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          276 DEVSLNAKDLVRKLIVLDPKKRLT-----TFQALQHPWVTGKAA  314 (349)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHHSTTTTSTTC
T ss_pred             hhCCHHHHHHHHHHccCChhhCcC-----HHHHhcCcccCCCcc
Confidence            468999999999999999999998     599999999997543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=97.77  E-value=1.4e-05  Score=56.70  Aligned_cols=36  Identities=22%  Similarity=0.387  Sum_probs=32.4

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ++++++||++||+.||.+|++     +.++++||||....+
T Consensus       285 ~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          285 DPYALDLIDKLLVLDPAQRID-----SDDALNHDFFWSDPM  320 (351)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGGSSSC
T ss_pred             ChHHHHHHHHHhcCChhhCCC-----HHHHhCCCCcCCCCC
Confidence            788999999999999999998     599999999986443

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=97.77  E-value=1.3e-05  Score=55.49  Aligned_cols=42  Identities=17%  Similarity=0.266  Sum_probs=37.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .+|..++.++++||++||..||.+|++     +.++++||||.....
T Consensus       231 ~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          231 AIPGDCGPPLSDLLKGMLEYEPAKRFS-----IRQIRQHSWFRKKHP  272 (305)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSTTTSCC-----HHHHHHSHHHHSCCC
T ss_pred             CCCCccCHHHHHHHHHHccCChhhCCC-----HHHHhcCcccccCCC
Confidence            356778999999999999999999998     599999999987544

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.76  E-value=1.9e-05  Score=55.10  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++++++||++||..||.+|++     +.++++||||+++
T Consensus       298 ~~~~~~~li~~~l~~~p~~Rps-----~~~~l~~~~f~~~  332 (332)
T 3qd2_B          298 KYPQEHMMVQDMLSPSPTERPE-----ATDIIENAIFENL  332 (332)
T ss_dssp             HCHHHHHHHHHHHCSSGGGSCC-----HHHHHHSTTCCCC
T ss_pred             CChhHHHHHHHHccCCCCcCCC-----HHHHhhchhhhcC
Confidence            5688999999999999999998     5999999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=97.76  E-value=1.2e-05  Score=59.87  Aligned_cols=33  Identities=12%  Similarity=0.351  Sum_probs=30.8

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++++++||++||+.||.+|++     +.++++||||..
T Consensus       329 s~~~~dLl~~mL~~dP~~R~t-----a~e~L~Hp~~~~  361 (464)
T 3ttj_A          329 ASQARDLLSKMLVIDPAKRIS-----VDDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCC-----HHHHHTSTTTGG
T ss_pred             CHHHHHHHHHHcCCChhhCCC-----HHHHhcChhhhh
Confidence            678999999999999999998     599999999984

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=97.75  E-value=1.5e-05  Score=57.29  Aligned_cols=34  Identities=12%  Similarity=0.293  Sum_probs=31.9

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+++++++||++||+.+|.+|++     +.++++||||.
T Consensus       246 ~~s~~~~~li~~~L~~dP~~Rps-----~~ell~hp~f~  279 (361)
T 3uc3_A          246 RISPECCHLISRIFVADPATRIS-----IPEIKTHSWFL  279 (361)
T ss_dssp             CCCHHHHHHHHHHSCSCTTTSCC-----HHHHHTSHHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcC-----HHHHHhCcchh
Confidence            48999999999999999999998     59999999995

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=97.74  E-value=1.1e-05  Score=55.33  Aligned_cols=39  Identities=23%  Similarity=0.296  Sum_probs=35.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|..++.++++||++||..+|.+|++     +.+|++||||..
T Consensus       225 ~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~e~l~h~~~~~  263 (279)
T 3fdn_A          225 TFPDFVTEGARDLISRLLKHNPSQRPM-----LREVLEHPWITA  263 (279)
T ss_dssp             CCCTTSCHHHHHHHHHHCCSSGGGSCC-----HHHHHHCHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHhccChhhCCC-----HHHHhhCccccC
Confidence            467789999999999999999999998     599999999984

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.74  E-value=1.8e-05  Score=55.18  Aligned_cols=38  Identities=13%  Similarity=0.208  Sum_probs=34.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .|..++..+++||.+||+.||.+|++     +.++++||||+.
T Consensus       238 ~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~h~~~~~  275 (297)
T 3fxz_A          238 NPEKLSAIFRDFLNRCLEMDVEKRGS-----AKELLQHQFLKI  275 (297)
T ss_dssp             CGGGSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTCGGGGG
T ss_pred             CccccCHHHHHHHHHHccCChhHCcC-----HHHHhhChhhcc
Confidence            35678999999999999999999998     599999999985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=97.73  E-value=2.5e-05  Score=56.91  Aligned_cols=39  Identities=23%  Similarity=0.321  Sum_probs=35.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ..++.++++||++||+.||.+|++     +.++++||||.+..+
T Consensus       275 ~~~s~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~~~~  313 (387)
T 1kob_A          275 SSVSPEAKDFIKNLLQKEPRKRLT-----VHDALEHPWLKGDHS  313 (387)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHTSTTTSSCCT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcC-----HHHHhhCccccCCcc
Confidence            458999999999999999999998     599999999997544

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=97.73  E-value=1.6e-05  Score=54.85  Aligned_cols=37  Identities=22%  Similarity=0.316  Sum_probs=32.7

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +...++++++||++||..+|.+|++     +.++++||||++
T Consensus       252 ~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~h~~f~~  288 (290)
T 1t4h_A          252 DKVAIPEVKEIIEGCIRQNKDERYS-----IKDLLNHAFFQE  288 (290)
T ss_dssp             GGCCCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGC-
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCC-----HHHHhhCccccc
Confidence            3457789999999999999999998     599999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.72  E-value=1.4e-05  Score=56.05  Aligned_cols=37  Identities=16%  Similarity=0.106  Sum_probs=33.4

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..+++++++||++||+.+|.+|++     +.++++||||+.
T Consensus       274 ~~~~~~~l~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~  310 (311)
T 3p1a_A          274 TAGLSSELRSVLVMMLEPDPKLRAT-----AEALLALPVLRQ  310 (311)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSCC-----HHHHHTSGGGSC
T ss_pred             ccCCCHHHHHHHHHHcCCChhhCcC-----HHHHHhCccccC
Confidence            3468999999999999999999998     599999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=97.72  E-value=3.2e-05  Score=55.82  Aligned_cols=32  Identities=22%  Similarity=0.259  Sum_probs=28.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +|..+|+++++||.+||++||.+|++     +.||++
T Consensus       278 ~~~~~s~~~~~li~~~L~~dP~~R~s-----a~el~~  309 (336)
T 4g3f_A          278 IPPSCAPLTAQAIQEGLRKEPVHRAS-----AMELRR  309 (336)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             cCccCCHHHHHHHHHHccCCHhHCcC-----HHHHHH
Confidence            57789999999999999999999997     478754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=97.71  E-value=9.7e-06  Score=56.93  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=36.8

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..++.++++||++||..||.+|++     +.++++||||.+.+|..
T Consensus       245 ~~~~~~~~~li~~~l~~dP~~Rps-----~~~~l~h~~~~~~~~~~  285 (322)
T 2ycf_A          245 AEVSEKALDLVKKLLVVDPKARFT-----TEEALRHPWLQDEDMKR  285 (322)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCC-----HHHHHTSGGGCCHHHHH
T ss_pred             hhcCHHHHHHHHHHcccCHhhCCC-----HHHHhhCcCcCCHHHHH
Confidence            357899999999999999999998     59999999999888754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=97.71  E-value=1.9e-05  Score=55.93  Aligned_cols=35  Identities=17%  Similarity=0.334  Sum_probs=32.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|+++++||++||+.||.+|++.     .++++||||.+
T Consensus       242 ~~s~~~~~li~~~L~~dP~~Rpt~-----~ell~h~w~~~  276 (325)
T 3kn6_A          242 NVSQEAKDLIQGLLTVDPNKRLKM-----SGLRYNEWLQD  276 (325)
T ss_dssp             TSCHHHHHHHHHHHCCCTTTCCCT-----TTSTTCGGGCT
T ss_pred             CCCHHHHHHHHHHCCCChhHCCCH-----HHHhcChhhcc
Confidence            489999999999999999999985     89999999985

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=97.70  E-value=3.3e-05  Score=52.64  Aligned_cols=37  Identities=22%  Similarity=0.432  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.++++||++||..+|.+|++     +.+|++||||.+.
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~~~~~~~  268 (276)
T 2yex_A          232 KKIDSAPLALLHKILVENPSARIT-----IPDIKKDRWYNKP  268 (276)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTCTTTTCC
T ss_pred             hhcCHHHHHHHHHHCCCCchhCCC-----HHHHhcCccccCh
Confidence            358999999999999999999998     5999999999863

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=97.70  E-value=1e-05  Score=57.06  Aligned_cols=39  Identities=13%  Similarity=0.254  Sum_probs=35.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .+++++++||++||..+|.+|++     +.++++||||+++.|.
T Consensus       302 ~~~~~~~~li~~~l~~~p~~Rps-----~~~~l~hp~~~~~~~~  340 (345)
T 3hko_A          302 VLSPLARDLLSNLLNRNVDERFD-----AMRALQHPWISQFSDK  340 (345)
T ss_dssp             GSCHHHHHHHHHHSCSCTTTSCC-----HHHHHHSHHHHTTSSC
T ss_pred             cCCHHHHHHHHHHcCCChhHCCC-----HHHHhcChhhccChHh
Confidence            37999999999999999999998     5999999999987653

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=97.68  E-value=1.8e-05  Score=59.31  Aligned_cols=39  Identities=15%  Similarity=0.442  Sum_probs=35.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..|..+++++++||++||+.||.+|++     +.+|++||||..
T Consensus       234 ~~p~~~s~~~~~Li~~~L~~dP~~Rpt-----~~eil~hp~~~~  272 (476)
T 2y94_A          234 YTPQYLNPSVISLLKHMLQVDPMKRAT-----IKDIREHEWFKQ  272 (476)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCC-----HHHHHTCHHHHT
T ss_pred             CCCccCCHHHHHHHHHHcCCCchhCcC-----HHHHHhCHHhhh
Confidence            356779999999999999999999998     599999999974

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=97.67  E-value=1.5e-05  Score=55.68  Aligned_cols=35  Identities=20%  Similarity=0.387  Sum_probs=31.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .++++++||++||+.||.+|++     +.++++||||..+
T Consensus       301 ~~~~l~~li~~~L~~dP~~Rpt-----~~ell~hp~f~~~  335 (339)
T 1z57_A          301 EHERLFDLIQKMLEYDPAKRIT-----LREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCC-----HHHHTTSGGGGGG
T ss_pred             hHHHHHHHHHHHhCcCcccccC-----HHHHhcCHHHHHH
Confidence            3578899999999999999998     5999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=97.67  E-value=4.7e-05  Score=53.00  Aligned_cols=40  Identities=13%  Similarity=0.103  Sum_probs=35.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .+|..++.++++||++||..+|.+|++     +.++++|+||...
T Consensus       251 ~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~e~l~~~~~~~~  290 (312)
T 2iwi_A          251 HFPAHVSPDCCALIRRCLAPKPSSRPS-----LEEILLDPWMQTP  290 (312)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSCC-----HHHHHHSTTTCC-
T ss_pred             CCcccCCHHHHHHHHHHccCChhhCcC-----HHHHhcChhhcCc
Confidence            467789999999999999999999998     5999999999964

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=97.66  E-value=2.6e-05  Score=53.50  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=36.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..+++++++||++||+.+|.+|++     +.++++||||.+..+..
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~Rps-----~~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          232 DTVTPEAKSLIDSMLTVNPKKRIT-----ADQALKVPWICNRERVA  272 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTSHHHHSCCCGG
T ss_pred             cccCHHHHHHHHHHcccChhhCCC-----HHHHhcCccccCChhHH
Confidence            358999999999999999999998     59999999999876543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=97.66  E-value=2.9e-05  Score=53.60  Aligned_cols=35  Identities=29%  Similarity=0.510  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+++++++||++||+.||.+|++     +.++++||||+.
T Consensus       250 ~~~~~~~~li~~~L~~dP~~Rps-----~~e~l~hp~f~~  284 (285)
T 3is5_A          250 PLTPQAVDLLKQMLTKDPERRPS-----AAQVLHHEWFKQ  284 (285)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCC-----HHHHHTSGGGGC
T ss_pred             cCCHHHHHHHHHHccCChhhCcC-----HHHHhcCHHhhc
Confidence            37899999999999999999998     599999999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=97.66  E-value=2e-05  Score=53.89  Aligned_cols=38  Identities=13%  Similarity=0.358  Sum_probs=34.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +|..++.++++||++||+.+|.+|++     +.++++||||+.
T Consensus       230 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~~l~h~~~~~  267 (276)
T 2h6d_A          230 IPEYLNRSVATLLMHMLQVDPLKRAT-----IKDIREHEWFKQ  267 (276)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHHSHHHHT
T ss_pred             CchhcCHHHHHHHHHHccCChhhCCC-----HHHHHhChhhcc
Confidence            56778999999999999999999998     599999999974

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=97.65  E-value=7.1e-06  Score=59.37  Aligned_cols=42  Identities=19%  Similarity=0.215  Sum_probs=37.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEEL   51 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l   51 (111)
                      ..+++++++||++||+.+|.+|++     +.++++||||.+..|...
T Consensus       313 ~~~~~~~~~li~~~L~~dp~~Rps-----~~e~l~hp~~~~~~~~~~  354 (373)
T 2x4f_A          313 QDISEEAKEFISKLLIKEKSWRIS-----ASEALKHPWLSDHKLHSR  354 (373)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHHSHHHHCHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhhCCC-----HHHHhcCcCcCCCchhhh
Confidence            358999999999999999999998     599999999998877543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=97.65  E-value=1.9e-05  Score=54.74  Aligned_cols=35  Identities=23%  Similarity=0.304  Sum_probs=32.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      ..++.++++||.+||..||.+|++     +.++++||||.
T Consensus       263 ~~~~~~l~~li~~~l~~dp~~R~s-----~~e~l~hp~~~  297 (298)
T 2zv2_A          263 PDIAEDLKDLITRMLDKNPESRIV-----VPEIKLHPWVT  297 (298)
T ss_dssp             SCCCHHHHHHHHHHTCSCTTTSCC-----HHHHTTCHHHH
T ss_pred             cccCHHHHHHHHHHhhcChhhCCC-----HHHHhcCcccc
Confidence            358999999999999999999998     59999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=97.64  E-value=1.9e-05  Score=54.97  Aligned_cols=44  Identities=23%  Similarity=0.262  Sum_probs=38.3

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELL   52 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~   52 (111)
                      |..++.++++||++||..+|.+|++     +.++++||||.+..+..+.
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt-----~~~ll~~~~~~~~~~~~~~  291 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRAT-----ATQLLQHPFVRSAKGVSIL  291 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCC-----HHHHTTSHHHHTCCCGGGG
T ss_pred             cccCCHHHHHHHHHHccCChhhCcC-----HHHHHhCHHHhcCCcchHH
Confidence            4457999999999999999999998     5999999999988766543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.62  E-value=4.6e-05  Score=52.43  Aligned_cols=39  Identities=13%  Similarity=0.152  Sum_probs=35.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      +|..++.++++||.+||..+|.+|++     +.+++.|+||...
T Consensus       247 ~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~ll~~~~~~~~  285 (295)
T 2clq_A          247 IPESMSAEAKAFILKCFEPDPDKRAC-----ANDLLVDEFLKVS  285 (295)
T ss_dssp             CCTTSCHHHHHHHHHTTCSSTTTSCC-----HHHHHTSGGGCC-
T ss_pred             ccccCCHHHHHHHHHHccCChhhCCC-----HHHHhcChhhhhc
Confidence            56779999999999999999999998     5999999999854

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=97.62  E-value=1.2e-05  Score=57.45  Aligned_cols=39  Identities=10%  Similarity=0.265  Sum_probs=35.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ..++.++++||++||..||.+|++     +.++++||||.+.++
T Consensus       257 ~~~s~~~~~li~~~L~~dP~~R~s-----~~e~l~hp~~~~~~~  295 (351)
T 3c0i_A          257 SHISESAKDLVRRMLMLDPAERIT-----VYEALNHPWLKERDR  295 (351)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSHHHHTHHH
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcC-----HHHHhcChhhcCCcc
Confidence            358999999999999999999998     599999999987654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=97.62  E-value=4.7e-05  Score=53.81  Aligned_cols=37  Identities=22%  Similarity=0.432  Sum_probs=33.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..++.++++||++||..||.+|++     +.++++||||...
T Consensus       232 ~~~~~~~~~li~~~L~~dP~~R~t-----~~eil~h~~~~~~  268 (323)
T 3tki_A          232 KKIDSAPLALLHKILVENPSARIT-----IPDIKKDRWYNKP  268 (323)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTCTTTTCC
T ss_pred             ccCCHHHHHHHHHHccCChhhCcC-----HHHHhhChhhccc
Confidence            358999999999999999999998     5999999999853

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=97.61  E-value=9.6e-06  Score=60.20  Aligned_cols=40  Identities=20%  Similarity=0.297  Sum_probs=35.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..+|+++++||++||+.+|.+|++     +.++++||||+...+.
T Consensus       252 ~~~s~~~~~li~~~L~~dp~~R~s-----~~e~l~h~~~~~~~~~  291 (484)
T 3nyv_A          252 KKVSESAKDLIRKMLTYVPSMRIS-----ARDALDHEWIQTYTKE  291 (484)
T ss_dssp             GGSCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSHHHHHHTC-
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcC-----HHHHhhChhhcccccc
Confidence            358999999999999999999998     5999999999865543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=97.60  E-value=1e-05  Score=55.88  Aligned_cols=40  Identities=15%  Similarity=0.282  Sum_probs=35.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..++.++++||++||..+|.+|++     +.++++||||...+|+
T Consensus       247 ~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~hp~~~~~~~~  286 (287)
T 2wei_A          247 RTISDDAKDLIRKMLTFHPSLRIT-----ATQCLEHPWIQKYSSE  286 (287)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHHSHHHHHHCCC
T ss_pred             hhcCHHHHHHHHHHcccChhhCcC-----HHHHhcCHHHhccccC
Confidence            358999999999999999999998     5999999999876653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=97.60  E-value=3.4e-05  Score=54.84  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=29.5

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      ++.+++||++||+.||.+|++     +.++++||||+
T Consensus       329 ~~~l~~li~~~L~~dP~~Rpt-----a~elL~hp~f~  360 (360)
T 3llt_A          329 HELFCDFLYSILQIDPTLRPS-----PAELLKHKFLE  360 (360)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCC-----HHHHTTSGGGC
T ss_pred             HHHHHHHHHHHhcCChhhCCC-----HHHHhcCcccC
Confidence            478889999999999999998     59999999995

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=97.58  E-value=2.4e-05  Score=53.73  Aligned_cols=36  Identities=17%  Similarity=0.189  Sum_probs=32.9

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.++++||.+||+.+|.+|++     +.++++||||..
T Consensus       237 ~~~~~~~~~li~~~l~~~p~~Rpt-----~~e~l~hp~f~~  272 (290)
T 3fme_A          237 DKFSAEFVDFTSQCLKKNSKERPT-----YPELMQHPFFTL  272 (290)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC-----HHHHTTSHHHHH
T ss_pred             ccCCHHHHHHHHHHhhcChhhCcC-----HHHHHhCccccc
Confidence            358999999999999999999998     599999999973

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=97.57  E-value=2.2e-05  Score=54.53  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.++++||.+||..||.+|++     +.++++||||.+
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~Rps-----~~~~l~h~~~~~  267 (304)
T 2jam_A          232 DDISESAKDFICHLLEKDPNERYT-----CEKALSHPWIDG  267 (304)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCC-----HHHHHTSHHHHS
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcC-----HHHHhcCccccC
Confidence            568999999999999999999998     599999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=97.57  E-value=3.4e-05  Score=53.98  Aligned_cols=42  Identities=21%  Similarity=0.141  Sum_probs=37.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEEL   51 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l   51 (111)
                      ..++.++++||++||..+|.+|++     +.++++||||.+..+...
T Consensus       257 ~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~hp~~~~~~~~~~  298 (326)
T 2x7f_A          257 KKWSKKFQSFIESCLVKNHSQRPA-----TEQLMKHPFIRDQPNERQ  298 (326)
T ss_dssp             SCSCHHHHHHHHHHCCSSGGGSCC-----HHHHHTSHHHHCCTTHHH
T ss_pred             cccCHHHHHHHHHHhccChhhCCC-----HHHHhhChHHhhCccccc
Confidence            458999999999999999999998     599999999998877653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=97.56  E-value=3.4e-05  Score=53.65  Aligned_cols=36  Identities=17%  Similarity=0.257  Sum_probs=33.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.++++||++||..||.+|++     +.++++||||.+
T Consensus       227 ~~~~~~~~~li~~~l~~dP~~Rps-----~~e~l~hp~~~~  262 (299)
T 3m2w_A          227 SEVSEEVKMLIRNLLKTEPTQRMT-----ITEFMNHPWIMQ  262 (299)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSHHHHT
T ss_pred             ccCCHHHHHHHHHHcccChhhCCC-----HHHHhcChhhcc
Confidence            458999999999999999999998     599999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=97.54  E-value=2.1e-05  Score=55.67  Aligned_cols=36  Identities=14%  Similarity=0.290  Sum_probs=33.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+|.++++||++||..||.+|++     +.++++||||..
T Consensus       228 ~~~s~~~~~li~~~L~~dp~~Rpt-----~~e~l~hp~~~~  263 (321)
T 1tki_A          228 KEISIEAMDFVDRLLVKERKSRMT-----ASEALQHPWLKQ  263 (321)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHHSHHHHS
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcC-----HHHHhcChhhcc
Confidence            358999999999999999999998     599999999985

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=97.52  E-value=4.8e-05  Score=54.00  Aligned_cols=39  Identities=10%  Similarity=0.200  Sum_probs=35.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|...+.++++||.+||+.||.+|++     +.++++||||..
T Consensus       241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt-----~~e~l~hp~~~~  279 (343)
T 3dbq_A          241 EFPDIPEKDLQDVLKCCLKRDPKQRIS-----IPELLAHPYVQI  279 (343)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSHHHHS
T ss_pred             CCcccCCHHHHHHHHHHcCCChhHCCC-----HHHHHhCccccc
Confidence            456778899999999999999999998     599999999973

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=97.51  E-value=4e-05  Score=52.95  Aligned_cols=39  Identities=15%  Similarity=0.342  Sum_probs=35.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|..++.++++||++||+.+|.+|++     +.++++|+||..
T Consensus       233 ~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~ll~~~~~~~  271 (294)
T 2rku_A          233 SIPKHINPVAASLIQKMLQTDPTARPT-----INELLNDEFFTS  271 (294)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----GGGGGGSHHHHT
T ss_pred             CCccccCHHHHHHHHHHcccChhhCcC-----HHHHhhChheec
Confidence            357789999999999999999999998     499999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=97.51  E-value=3e-05  Score=56.55  Aligned_cols=36  Identities=17%  Similarity=0.257  Sum_probs=33.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.++++||++||+.||.+|++     +.+|++||||.+
T Consensus       292 ~~~s~~~~~li~~~L~~dP~~Rpt-----~~eil~hp~~~~  327 (400)
T 1nxk_A          292 SEVSEEVKMLIRNLLKTEPTQRMT-----ITEFMNHPWIMQ  327 (400)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHHSHHHHT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcC-----HHHHhcCccccC
Confidence            458999999999999999999998     599999999974

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.49  E-value=5e-05  Score=52.97  Aligned_cols=39  Identities=10%  Similarity=0.200  Sum_probs=34.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|...+.++++||++||..+|.+|++     +.++++||||..
T Consensus       260 ~~~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~h~~~~~  298 (313)
T 3cek_A          260 EFPDIPEKDLQDVLKCCLKRDPKQRIS-----IPELLAHPYVQI  298 (313)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSHHHHC
T ss_pred             CCcccchHHHHHHHHHHccCCcccCcC-----HHHHhcCccccC
Confidence            356677899999999999999999998     599999999984

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=97.49  E-value=7.3e-05  Score=52.69  Aligned_cols=38  Identities=18%  Similarity=0.304  Sum_probs=33.8

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      ..+++++++||.+||+.||.+|++     +.++++||||....
T Consensus       265 ~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~hp~~~~~~  302 (321)
T 2c30_A          265 HKVSPVLRDFLERMLVRDPQERAT-----AQELLDHPFLLQTG  302 (321)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCC-----HHHHHTSGGGGGCC
T ss_pred             ccCCHHHHHHHHHHccCChhhCcC-----HHHHhcChhhccCC
Confidence            358899999999999999999998     59999999998543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=97.49  E-value=2.5e-05  Score=58.07  Aligned_cols=37  Identities=14%  Similarity=0.300  Sum_probs=33.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..+|.++++||++||+.+|.+|++     +.++++||||+..
T Consensus       247 ~~~s~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~~~~~  283 (486)
T 3mwu_A          247 RTISDDAKDLIRKMLTFHPSLRIT-----ATQCLEHPWIQKY  283 (486)
T ss_dssp             GGSCHHHHHHHHHHTCSSTTTSCC-----HHHHHHCHHHHHT
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcC-----HHHHhcCHhhccC
Confidence            358999999999999999999998     5999999999854

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=97.48  E-value=5.6e-05  Score=54.89  Aligned_cols=40  Identities=10%  Similarity=0.179  Sum_probs=35.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .+|...+.++++||++||..||.+|++     +.++++||||...
T Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~Rps-----~~ell~hp~~~~~  327 (390)
T 2zmd_A          288 EFPDIPEKDLQDVLKCCLKRDPKQRIS-----IPELLAHPYVQIQ  327 (390)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSHHHHSC
T ss_pred             CCCccchHHHHHHHHHHcccChhhCCC-----HHHHhhCcCcccc
Confidence            356678899999999999999999998     5999999999853

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=97.48  E-value=4.5e-05  Score=53.95  Aligned_cols=39  Identities=15%  Similarity=0.342  Sum_probs=35.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|..++.++++||++||+.||.+|++     +.++++|+||..
T Consensus       259 ~~~~~~~~~~~~li~~~l~~dp~~Rps-----~~ell~~~~~~~  297 (335)
T 2owb_A          259 SIPKHINPVAASLIQKMLQTDPTARPT-----INELLNDEFFTS  297 (335)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----GGGGGGSHHHHT
T ss_pred             CCCccCCHHHHHHHHHHccCChhHCcC-----HHHHhcCccccC
Confidence            457789999999999999999999998     499999999985

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=97.47  E-value=3.7e-05  Score=54.54  Aligned_cols=36  Identities=19%  Similarity=0.298  Sum_probs=33.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.++++||++||..+|.+|++     +.++++||||.+
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt-----~~ell~hp~~~~  293 (336)
T 3fhr_A          258 SEVSEDAKQLIRLLLKTDPTERLT-----ITQFMNHPWINQ  293 (336)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCC-----HHHHHHSHHHHT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcC-----HHHHhcCccccc
Confidence            458999999999999999999998     599999999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=97.47  E-value=7.6e-05  Score=53.60  Aligned_cols=34  Identities=29%  Similarity=0.378  Sum_probs=31.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .++.++++||++||..||.+|++     +.++++||||+
T Consensus       331 ~~~~~~~~li~~~L~~dP~~Rps-----~~ell~hp~f~  364 (365)
T 2y7j_A          331 DRSSTVKDLISRLLQVDPEARLT-----AEQALQHPFFE  364 (365)
T ss_dssp             SSCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSGGGC
T ss_pred             cCCHHHHHHHHHHcCCChhHCcC-----HHHHhcCcccC
Confidence            57889999999999999999998     59999999996

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=97.47  E-value=8.7e-05  Score=55.07  Aligned_cols=35  Identities=23%  Similarity=0.384  Sum_probs=32.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|+++++||++||+.||.+|++     +.++++||||.+
T Consensus       239 ~~s~~~~~li~~~L~~dP~~Rpt-----a~e~L~hp~~~~  273 (444)
T 3soa_A          239 TVTPEAKDLINKMLTINPSKRIT-----AAEALKHPWISH  273 (444)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSCTTHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCCC-----HHHHhcCccccC
Confidence            58999999999999999999998     599999999974

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.44  E-value=1.2e-05  Score=55.18  Aligned_cols=40  Identities=20%  Similarity=0.371  Sum_probs=35.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..++..+++||++||..+|.+|++     +.++++||||+.+.|.
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~Rps-----~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          236 SNTSELAKDFIRRLLVKDPKRRMT-----IAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             TTCCHHHHHHHHTTSCSSGGGSCC-----HHHHHHCHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcC-----HHHHHhCHHHHHHHHH
Confidence            457899999999999999999998     5999999999976543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=97.44  E-value=3e-05  Score=55.82  Aligned_cols=37  Identities=14%  Similarity=0.109  Sum_probs=34.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..+++++++||.+||+.||.+|++     +.++++||||.++
T Consensus       330 ~~~~~~~~~li~~~L~~dp~~Rpt-----~~e~l~hp~f~~~  366 (377)
T 3byv_A          330 KNIPQPVRALLEGFLRYPKEDRLL-----PLQAMETPEYEQL  366 (377)
T ss_dssp             CCCCHHHHHHHHHHTCSSGGGCCC-----HHHHHTSHHHHHH
T ss_pred             cCCCHHHHHHHHHHcCCCchhCCC-----HHHHhhChHHHHH
Confidence            568999999999999999999998     5999999999864

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=97.41  E-value=5.1e-05  Score=56.71  Aligned_cols=36  Identities=17%  Similarity=0.248  Sum_probs=33.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+|.++++||++||+.||.+|++     +.++++||||+.
T Consensus       272 ~~~s~~~~~li~~~L~~dp~~R~t-----~~e~l~h~~~~~  307 (504)
T 3q5i_A          272 KNISDEAKELIKLMLTYDYNKRCT-----AEEALNSRWIKK  307 (504)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhHCCC-----HHHHhcCHhhhh
Confidence            468999999999999999999998     599999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=97.39  E-value=5.6e-05  Score=56.39  Aligned_cols=39  Identities=18%  Similarity=0.325  Sum_probs=34.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ..+|.++++||++||+.+|.+|++     +.++++||||..+..
T Consensus       262 ~~~s~~~~~li~~~L~~dp~~R~s-----~~e~l~hp~~~~~~~  300 (494)
T 3lij_A          262 KNVSEGAKDLIKQMLQFDSQRRIS-----AQQALEHPWIKEMCS  300 (494)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCC-----HHHHHTCHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHCCCChhhCcc-----HHHHhcCcccccCcc
Confidence            358999999999999999999998     599999999986433

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=97.37  E-value=4.7e-05  Score=52.06  Aligned_cols=35  Identities=20%  Similarity=0.340  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+++++++||++||..+|.+|++     +.++++||||..
T Consensus       233 ~~~~~~~~li~~~l~~dp~~R~s-----~~~~l~h~~~~~  267 (277)
T 3f3z_A          233 NVSPQAESLIRRLLTKSPKQRIT-----SLQALEHEWFEK  267 (277)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCC-----HHHHTTSHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcC-----HHHHhcCHHHhc
Confidence            58999999999999999999998     599999999974

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=97.36  E-value=7.2e-05  Score=55.03  Aligned_cols=35  Identities=14%  Similarity=0.217  Sum_probs=31.7

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ++.++++||++||+.||.+|++     +.+|++||||...
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps-----~~eil~hp~f~~~  302 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPT-----AMKVLRHPLFWPK  302 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCC-----HHHHHTSGGGSCH
T ss_pred             chHHHHHHHHHHhhCChhhCCC-----HHHHHhCCccCCc
Confidence            5689999999999999999998     5999999999753

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=97.34  E-value=6e-05  Score=54.20  Aligned_cols=35  Identities=20%  Similarity=0.280  Sum_probs=32.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+++++++||.+||..||.+|++     +.++++||||.+
T Consensus       256 ~~~~~~~~li~~~L~~dP~~R~t-----~~e~l~hp~~~~  290 (362)
T 2bdw_A          256 TVTPEAKSLIDSMLTVNPKKRIT-----ADQALKVPWICN  290 (362)
T ss_dssp             GSCHHHHHHHHHHSCSSGGGSCC-----HHHHTTSHHHHT
T ss_pred             CCCHHHHHHHHHHcCCChhhCcC-----HHHHhcCcccCC
Confidence            47999999999999999999998     599999999974

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=97.24  E-value=0.00014  Score=51.10  Aligned_cols=56  Identities=5%  Similarity=-0.092  Sum_probs=29.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh-------------------------cCCCCCCCChhHHhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK-------------------------KQAFFRHIQWEELLHRRVK   57 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~-------------------------~h~ff~~i~w~~l~~~~~~   57 (111)
                      .|..++.++.+||.+||..+|.+|++.     .++.                         .+|.+.+++|..+..+.+.
T Consensus       238 ~~~~~~~~~~~li~~~l~~dp~~Rps~-----~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  312 (325)
T 3kex_A          238 QPQICTIDVYMVMVKCWMIDENIRPTF-----KELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVELE  312 (325)
T ss_dssp             CCTTBCTTTTHHHHHHTCSCTTTSCCH-----HHHHHHHHHHTTSHHHHBCCCSSSSCCCBCCCCCCC------------
T ss_pred             CCCcCcHHHHHHHHHHcCCChhhCcCH-----HHHHHHHHHHHhcchhhhccccCCCCCCCCCCccccchhhcccccccc
Confidence            456688899999999999999999874     5554                         3566666666666666666


Q ss_pred             CCcccc
Q psy3349          58 PPFVPT   63 (111)
Q Consensus        58 pp~~p~   63 (111)
                      |++.|.
T Consensus       313 ~~~~~~  318 (325)
T 3kex_A          313 PELDLD  318 (325)
T ss_dssp             ------
T ss_pred             hhccCC
Confidence            666554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=97.20  E-value=0.00016  Score=50.16  Aligned_cols=35  Identities=14%  Similarity=0.096  Sum_probs=32.6

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .++.++++||.+||..+|.+|++     +.+|++||||.+
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~h~~~~~  289 (318)
T 2dyl_A          255 GFSGDFQSFVKDCLTKDHRKRPK-----YNKLLEHSFIKR  289 (318)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCC-----HHHHTTSHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcC-----HHHHhhCHHHHh
Confidence            47999999999999999999998     599999999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=97.18  E-value=0.00041  Score=47.30  Aligned_cols=38  Identities=11%  Similarity=0.001  Sum_probs=34.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +|..++.++++||++||..+|.+|++     +.+|+.|+|+.+
T Consensus       236 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~ll~~~~~~~  273 (279)
T 2w5a_A          236 IPYRYSDELNEIITRMLNLKDYHRPS-----VEEILENPLILE  273 (279)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSTTCCG
T ss_pred             CCcccCHHHHHHHHHHcCCCcccCCC-----HHHHHhChhhhh
Confidence            56678999999999999999999998     599999999974

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=97.14  E-value=0.00027  Score=49.32  Aligned_cols=54  Identities=9%  Similarity=-0.028  Sum_probs=30.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCC--CChHhhhcCCCCCCCChhHHhcCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSE--RDAEDVKKQAFFRHIQWEELLHRRV   56 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~--~g~~~i~~h~ff~~i~w~~l~~~~~   56 (111)
                      .|..++.++++||++||..||.+|++...  ..+++++.|+|+....++.+.....
T Consensus       260 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~~~~~  315 (323)
T 3qup_A          260 QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIE  315 (323)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----------------
T ss_pred             CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCC
Confidence            46678999999999999999999987310  1236789999999877766654443

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=97.14  E-value=0.00022  Score=49.40  Aligned_cols=38  Identities=21%  Similarity=0.121  Sum_probs=34.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ++..++.++++||.+||..+|.+|++     +.++++|+||..
T Consensus       239 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~~~~~~~  276 (303)
T 3a7i_A          239 LEGNYSKPLKEFVEACLNKEPSFRPT-----AKELLKHKFILR  276 (303)
T ss_dssp             CCSSCCHHHHHHHHHHCCSSGGGSCC-----HHHHTTCHHHHH
T ss_pred             CccccCHHHHHHHHHHcCCChhhCcC-----HHHHhhChhhhc
Confidence            45578999999999999999999998     599999999963

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=97.11  E-value=0.00023  Score=49.89  Aligned_cols=40  Identities=15%  Similarity=0.082  Sum_probs=34.9

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..++.++++||++||..||.+|++     +.+|++||||....+.
T Consensus       256 ~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~hp~~~~~~~~  295 (327)
T 3aln_A          256 REFSPSFINFVNLCLTKDESKRPK-----YKELLKHPFILMYEER  295 (327)
T ss_dssp             CCCCHHHHHHHHHHTCSSGGGSCC-----HHHHTTSHHHHHHHHS
T ss_pred             ccCCHHHHHHHHHHhhCChhhCcC-----HHHHHhChHHHHhHhh
Confidence            358999999999999999999998     5999999999865443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=96.96  E-value=0.0002  Score=56.06  Aligned_cols=49  Identities=8%  Similarity=0.041  Sum_probs=37.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFV   61 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~   61 (111)
                      .++.++.+||++||..||.+|+++     .+++.||||..  ++.+..+++...|.
T Consensus       269 ~ls~~L~dLI~~mL~~DP~kRPTa-----~elL~hp~F~~--l~~iL~~kil~~f~  317 (676)
T 3qa8_A          269 ILAGKLERWLQCMLMWHQRQRGTD-----PQNPNVGCFQA--LDSILSLKLLSVMN  317 (676)
T ss_dssp             GGHHHHHHHHHHHSCSSCC---CC-----TTCCCCTTHHH--HHHHHCCCEEECCC
T ss_pred             hhhHHHHHHHHHHccCCHhhCcCH-----HHHhcCHHHHH--HHHHHhcccccccc
Confidence            467899999999999999999985     89999999996  56666666544443

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=96.94  E-value=0.00015  Score=53.05  Aligned_cols=38  Identities=13%  Similarity=0.120  Sum_probs=34.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQ   47 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~   47 (111)
                      ..+++++++||.+||..+|.+|++     +.++++||||+.+.
T Consensus       334 ~~~~~~~~~li~~~l~~dP~~Rpt-----~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          334 KNIPQPVRALLEGFLRYPKEDRLL-----PLQAMETPEYEQLR  371 (413)
T ss_dssp             CCCCHHHHHHHHHHTCSSGGGSCC-----HHHHTTSHHHHHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCcC-----HHHHHhCHHHHHHH
Confidence            458899999999999999999998     49999999998753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=96.93  E-value=0.00039  Score=49.69  Aligned_cols=36  Identities=22%  Similarity=0.123  Sum_probs=33.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..++.++++||.+||+.+|.+|++     +.++++|+||..
T Consensus       276 ~~~~~~l~~li~~~l~~dP~~Rps-----~~~ll~h~~~~~  311 (348)
T 1u5q_A          276 GHWSEYFRNFVDSCLQKIPQDRPT-----SEVLLKHRFVLR  311 (348)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC-----HHHHTTCHHHHS
T ss_pred             CCCCHHHHHHHHHHcccChhhCcC-----HHHHhhChhhhc
Confidence            468999999999999999999998     599999999974

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=96.71  E-value=0.0005  Score=47.87  Aligned_cols=44  Identities=14%  Similarity=0.111  Sum_probs=34.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC------CCCCCCChhHH
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ------AFFRHIQWEEL   51 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h------~ff~~i~w~~l   51 (111)
                      .|..++.++++||++||..+|.+|++     +.++.+|      ++|..++|...
T Consensus       261 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~e~l~~L~~~~~~~~~~~~~~~~  310 (322)
T 1p4o_A          261 KPDNCPDMLFELMRMCWQYNPKMRPS-----FLEIISSIKEEMEPGFREVSFYYS  310 (322)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHHHGGGSCTTHHHHCSTTS
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcC-----HHHHHHHHHHhhccCCcccccccc
Confidence            45678999999999999999999998     4777655      66665555443

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.51  E-value=0.0016  Score=48.85  Aligned_cols=58  Identities=14%  Similarity=-0.038  Sum_probs=38.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCC-----CChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSE-----RDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~-----~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      ..++.++++||.+||..+|.+|++...     ..+.....|+|+..+||+.+..+....+..|
T Consensus       242 ~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~~~~~~~~~p  304 (483)
T 3sv0_A          242 RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIASAP  304 (483)
T ss_dssp             TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC---------
T ss_pred             cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhccccccccCCC
Confidence            467899999999999999999997410     0011225689999999999877765554444

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=95.96  E-value=0.0014  Score=45.67  Aligned_cols=31  Identities=10%  Similarity=0.066  Sum_probs=27.2

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQA   41 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~   41 (111)
                      .++..+++||++||+.||++|++     +.++++||
T Consensus       274 ~~~~~l~~ll~~~L~~dP~~R~s-----~~ell~h~  304 (319)
T 4euu_A          274 GLQVLLTPVLANILEADQEKCWG-----FDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHHHHSCCCTTTSCC-----HHHHHHHH
T ss_pred             hHHHHhHHHHHHhccCChhhhcc-----HHHhhhcc
Confidence            45678999999999999999998     58998875

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=95.88  E-value=0.0057  Score=44.17  Aligned_cols=34  Identities=6%  Similarity=0.096  Sum_probs=30.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|..+++++++||.++|+.||.+|++     +.+|.+|
T Consensus       308 ~~p~~~~~~~~~li~~c~~~dP~~RPt-----~~eil~~  341 (353)
T 4ase_A          308 RAPDYTTPEMYQTMLDCWHGEPSQRPT-----FSELVEH  341 (353)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCcChhHCcC-----HHHHHHH
Confidence            467889999999999999999999998     5888876

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=95.64  E-value=0.0031  Score=43.79  Aligned_cols=35  Identities=20%  Similarity=0.115  Sum_probs=31.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      ..++.++++||.+||..||.+|+++     .+++.|+|++
T Consensus       244 ~~~~~~l~~li~~~l~~dP~~R~~~-----~~~l~~~l~~  278 (311)
T 3ork_A          244 EGLSADLDAVVLKALAKNPENRYQT-----AAEMRADLVR  278 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCSS-----HHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhcCHhhChhh-----HHHHHHHHHH
Confidence            3589999999999999999999986     7888888876

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=95.61  E-value=0.0085  Score=42.80  Aligned_cols=34  Identities=15%  Similarity=0.222  Sum_probs=29.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|..+++++++||.++|++||.+|++     +.+|..+
T Consensus       280 ~~p~~~~~~~~~li~~cl~~dP~~RPs-----~~ei~~~  313 (329)
T 4aoj_A          280 ERPRACPPEVYAIMRGCWQREPQQRHS-----IKDVHAR  313 (329)
T ss_dssp             CCCTTCCHHHHHHHHHHCCSSTTTSCC-----HHHHHHH
T ss_pred             CCcccccHHHHHHHHHHcCcChhHCcC-----HHHHHHH
Confidence            467889999999999999999999997     5888643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=95.37  E-value=0.017  Score=39.36  Aligned_cols=42  Identities=5%  Similarity=-0.075  Sum_probs=32.6

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc----------CCCCCCCChhHH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK----------QAFFRHIQWEEL   51 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~----------h~ff~~i~w~~l   51 (111)
                      ..+++++++||++||..+|.+|++.     .+|.+          ..+-..+||+.+
T Consensus       244 ~~~~~~l~~li~~~l~~~p~~Rpt~-----~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 4hgt_A          244 KGYPSEFATYLNFCRSLRFDDKPDY-----SYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCH-----HHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred             ccCCHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHHhCCCccCccchhhc
Confidence            4579999999999999999999984     55543          455566778754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=95.01  E-value=0.017  Score=40.52  Aligned_cols=33  Identities=6%  Similarity=0.102  Sum_probs=28.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..+++++++||.+||..+|.+|++     +.+|..|
T Consensus       317 ~~~~~~~~l~~li~~~l~~dP~~Rps-----~~ell~~  349 (359)
T 3vhe_A          317 APDYTTPEMYQTMLDCWHGEPSQRPT-----FSELVEH  349 (359)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCC-----HHHHHHH
Confidence            56678999999999999999999997     4888755

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=94.99  E-value=0.023  Score=39.98  Aligned_cols=31  Identities=13%  Similarity=0.117  Sum_probs=28.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDV   37 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i   37 (111)
                      ..|..+++++++||.++|++||.+|++     +.+|
T Consensus       250 ~~p~~~~~~~~~li~~cl~~dP~~RPs-----~~~i  280 (299)
T 4asz_A          250 QRPRTCPQEVYELMLGCWQREPHMRKN-----IKGI  280 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHH
T ss_pred             CCCccchHHHHHHHHHHcCCChhHCcC-----HHHH
Confidence            467889999999999999999999997     5777

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=94.97  E-value=0.019  Score=38.67  Aligned_cols=33  Identities=12%  Similarity=0.035  Sum_probs=28.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      +|..++.++++||.+||..+|.+|++     +.++++|
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~e~l~~  267 (271)
T 3dtc_A          235 IPSTCPEPFAKLMEDCWNPDPHSRPS-----FTNILDQ  267 (271)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhcCCcccCcC-----HHHHHHH
Confidence            45678999999999999999999998     4777653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=94.89  E-value=0.019  Score=39.15  Aligned_cols=34  Identities=9%  Similarity=-0.167  Sum_probs=29.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .+|..++.++++||++||..+|.+|++     +.++.+|
T Consensus       233 ~~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~l~~~  266 (287)
T 1u59_A          233 ECPPECPPELYALMSDCWIYKWEDRPD-----FLTVEQR  266 (287)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCcCHHHHHHHHHHcCCChhhCcC-----HHHHHHH
Confidence            356789999999999999999999997     4787755

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=94.76  E-value=0.022  Score=38.49  Aligned_cols=36  Identities=17%  Similarity=0.214  Sum_probs=31.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      ++..++.++++||++||..||.+|++     +.+++.|.+.
T Consensus       236 ~~~~~~~~~~~li~~~l~~dp~~Rps-----~~e~l~~l~~  271 (284)
T 2a19_B          236 ISDIFDKKEKTLLQKLLSKKPEDRPN-----TSEILRTLTV  271 (284)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHccCChhhCcC-----HHHHHHHHHH
Confidence            45678999999999999999999997     5899887654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=94.73  E-value=0.023  Score=39.01  Aligned_cols=33  Identities=6%  Similarity=0.102  Sum_probs=28.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..+++++++||.+||..+|.+|++     +.+|..|
T Consensus       272 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~~  304 (316)
T 2xir_A          272 APDYTTPEMYQTMLDCWHGEPSQRPT-----FSELVEH  304 (316)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcC-----HHHHHHH
Confidence            46678999999999999999999997     4888765

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=94.71  E-value=0.025  Score=38.18  Aligned_cols=33  Identities=18%  Similarity=0.221  Sum_probs=28.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.++++||++||..+|.+|++     +.++++|
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~ll~~  260 (269)
T 4hcu_A          228 KPRLASTHVYQIMNHCWRERPEDRPA-----FSRLLRQ  260 (269)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHccCCcccCcC-----HHHHHHH
Confidence            45668999999999999999999998     4777654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=94.70  E-value=0.03  Score=38.28  Aligned_cols=31  Identities=6%  Similarity=-0.010  Sum_probs=27.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|..+++++++||++||..+|.+|++.     .+++
T Consensus       264 ~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~ll  294 (302)
T 4e5w_A          264 CPPNCPDEVYQLMRKCWEFQPSNRTSF-----QNLI  294 (302)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCCCH-----HHHH
Confidence            567799999999999999999999974     6665

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=94.67  E-value=0.025  Score=38.86  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=28.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.++++||.+||..+|.+|++     +.+|.++
T Consensus       273 ~~~~~~~~~~~li~~~l~~dp~~Rps-----~~~l~~~  305 (314)
T 2ivs_A          273 RPDNCSEEMYRLMLQCWKQEPDKRPV-----FADISKD  305 (314)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcC-----HHHHHHH
Confidence            46678999999999999999999998     4777654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=94.62  E-value=0.025  Score=39.33  Aligned_cols=32  Identities=13%  Similarity=-0.049  Sum_probs=27.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..+++++++||++||..+|.+|++     +.++++
T Consensus       265 ~~~~~~~~l~~li~~~l~~dP~~Rps-----~~ell~  296 (327)
T 3lxl_A          265 APPACPAEVHELMKLCWAPSPQDRPS-----FSALGP  296 (327)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCcccHHHHHHHHHHcCCChhhCcC-----HHHHHH
Confidence            45678999999999999999999998     477753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=94.62  E-value=0.035  Score=37.15  Aligned_cols=31  Identities=10%  Similarity=-0.008  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|..++.++++||++||..+|.+|++     +.++.
T Consensus       232 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il  262 (271)
T 3kmu_A          232 IPPGISPHVSKLMKICMNEDPAKRPK-----FDMIV  262 (271)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcC-----HHHHH
Confidence            56779999999999999999999997     46665

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=94.57  E-value=0.026  Score=39.26  Aligned_cols=33  Identities=9%  Similarity=0.071  Sum_probs=28.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.++++||++||..+|.+|++     +.++..|
T Consensus       262 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~~  294 (327)
T 1fvr_A          262 KPLNCDDEVYDLMRQCWREKPYERPS-----FAQILVS  294 (327)
T ss_dssp             CCTTBCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcC-----HHHHHHH
Confidence            45678999999999999999999998     4787754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=94.56  E-value=0.035  Score=38.60  Aligned_cols=33  Identities=9%  Similarity=0.001  Sum_probs=28.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+|..+++++++||++||..+|.+|++     +.+|++
T Consensus       259 ~~~~~~~~~l~~li~~~l~~dP~~Rps-----~~~ll~  291 (309)
T 3p86_A          259 EIPRNLNPQVAAIIEGCWTNEPWKRPS-----FATIMD  291 (309)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCccCCHHHHHHHHHHccCChhhCcC-----HHHHHH
Confidence            467789999999999999999999998     477763

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=94.51  E-value=0.016  Score=40.40  Aligned_cols=37  Identities=8%  Similarity=-0.000  Sum_probs=32.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+..++..+++||.+||..+|.+|++     +.+|++|.++-
T Consensus       266 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~~l~~~  302 (327)
T 2yfx_A          266 PPKNCPGPVYRIMTQCWQHQPEDRPN-----FAIILERIEYC  302 (327)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcC-----HHHHHHHHHHH
Confidence            45678999999999999999999998     59999887654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=94.51  E-value=0.029  Score=38.14  Aligned_cols=32  Identities=13%  Similarity=0.006  Sum_probs=27.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +|..+++++++||++||..+|.+|++     +.++.+
T Consensus       238 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~l~~  269 (281)
T 1mp8_A          238 MPPNCPPTLYSLMTKCWAYDPSRRPR-----FTELKA  269 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcC-----HHHHHH
Confidence            56778999999999999999999997     477654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=94.41  E-value=0.018  Score=41.16  Aligned_cols=41  Identities=7%  Similarity=-0.051  Sum_probs=33.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .|..++.++++||++||+.+|.+|++     +.+|++|.++-.-+.
T Consensus       307 ~~~~~~~~l~~li~~~l~~dP~~Rps-----~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          307 PPKNCPGPVYRIMTQCWQHQPEDRPN-----FAIILERIEYCTQDP  347 (367)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHHHHHHHHCH
T ss_pred             CCccCCHHHHHHHHHHcCCCHhHCcC-----HHHHHHHHHHHhhCh
Confidence            45678999999999999999999998     599998876654333

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=94.39  E-value=0.032  Score=37.86  Aligned_cols=33  Identities=9%  Similarity=0.003  Sum_probs=27.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..+++.+++||++||..+|.+|++     +.++..+
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~ell~~  267 (281)
T 3cc6_A          235 KPDLCPPVLYTLMTRCWDYDPSDRPR-----FTELVCS  267 (281)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCCchhCcC-----HHHHHHH
Confidence            45668999999999999999999997     4777643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=94.34  E-value=0.03  Score=39.65  Aligned_cols=31  Identities=10%  Similarity=-0.105  Sum_probs=26.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|..+++++++||.++|+++|.+|++     +.+|.
T Consensus       262 ~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ei~  292 (307)
T 3omv_A          262 LYKNCPKAMKRLVADCVKKVKEERPL-----FPQIL  292 (307)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSSTTSCC-----HHHHH
T ss_pred             ccccchHHHHHHHHHHcCCCHhHCcC-----HHHHH
Confidence            45678999999999999999999997     46664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=94.29  E-value=0.033  Score=38.88  Aligned_cols=33  Identities=6%  Similarity=-0.046  Sum_probs=28.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.++.+||.+||..+|.+|++     +.+|.+|
T Consensus       296 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~l~~~  328 (344)
T 1rjb_A          296 QPFYATEEIYIIMQSCWAFDSRKRPS-----FPNLTSF  328 (344)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCchhCcC-----HHHHHHH
Confidence            46678999999999999999999998     4787754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=94.24  E-value=0.035  Score=37.34  Aligned_cols=33  Identities=9%  Similarity=0.092  Sum_probs=27.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|...+.++++||++||..+|.+|++     +.++++|
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~ll~~  258 (268)
T 3sxs_A          226 RPHLASDTIYQIMYSCWHELPEKRPT-----FQQLLSS  258 (268)
T ss_dssp             CCTTSCHHHHHHHHHTTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCcChHHHHHHHHHHcCCChhhCcC-----HHHHHHH
Confidence            35568999999999999999999998     4777654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=94.20  E-value=0.048  Score=37.00  Aligned_cols=31  Identities=6%  Similarity=-0.169  Sum_probs=27.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|..+++++++||++||..+|.+|++     +.+|.
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll  281 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPH-----FSYIV  281 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcC-----HHHHH
Confidence            56778999999999999999999998     46665

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=94.13  E-value=0.049  Score=37.08  Aligned_cols=25  Identities=4%  Similarity=-0.343  Sum_probs=22.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      ..++++.++||.++|..+|.+|++.
T Consensus       247 ~~~~~~l~~li~~~l~~dp~~RP~~  271 (298)
T 1csn_A          247 AGFPEEFYKYMHYARNLAFDATPDY  271 (298)
T ss_dssp             TTSCHHHHHHHHHHHHCCTTCCCCH
T ss_pred             hhCcHHHHHHHHHHhcCCcccCCCH
Confidence            4688999999999999999999984

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=94.11  E-value=0.038  Score=39.03  Aligned_cols=34  Identities=15%  Similarity=0.007  Sum_probs=29.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|..++.++.+||.++++.||.+|++     +.+|.++
T Consensus       267 ~~p~~~~~~~~~li~~C~~~dP~~RPs-----~~ei~~~  300 (308)
T 4gt4_A          267 PCPDDCPAWVYALMIECWNEFPSRRPR-----FKDIHSR  300 (308)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCcccchHHHHHHHHHHcCCChhHCcC-----HHHHHHH
Confidence            457789999999999999999999998     4777644

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=94.02  E-value=0.04  Score=37.33  Aligned_cols=33  Identities=6%  Similarity=-0.037  Sum_probs=28.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|...++++++||.+||..+|.+|++     +.++++|
T Consensus       242 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~ll~~  274 (283)
T 3gen_A          242 RPHLASEKVYTIMYSCWHEKADERPT-----FKILLSN  274 (283)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHccCChhHCcC-----HHHHHHH
Confidence            45568999999999999999999998     4777654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=94.00  E-value=0.056  Score=36.65  Aligned_cols=31  Identities=16%  Similarity=0.093  Sum_probs=26.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..+++++++||++||..+|.+|++     +.+++
T Consensus       233 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~~~  263 (288)
T 3kfa_A          233 RPEGCPEKVYELMRACWQWNPSDRPS-----FAEIH  263 (288)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCChhhCcC-----HHHHH
Confidence            45678999999999999999999997     46665

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=93.92  E-value=0.045  Score=37.71  Aligned_cols=31  Identities=10%  Similarity=0.034  Sum_probs=27.1

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..++.++++||++||+.+|.+|++     +.++.+|
T Consensus       270 ~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~~  300 (317)
T 2buj_A          270 PRHSSALWQLLNSMMTVDPHQRPH-----IPLLLSQ  300 (317)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCC-----HHHHHHH
Confidence            468999999999999999999997     4888754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=93.92  E-value=0.046  Score=36.57  Aligned_cols=32  Identities=16%  Similarity=0.200  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|...+.++++||++||..+|.+|++     +.++.+
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~ll~  257 (267)
T 3t9t_A          226 KPRLASTHVYQIMNHCWRERPEDRPA-----FSRLLR  257 (267)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCccCcHHHHHHHHHHccCChhhCcC-----HHHHHH
Confidence            35668999999999999999999998     477764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=93.85  E-value=0.047  Score=36.99  Aligned_cols=32  Identities=9%  Similarity=-0.030  Sum_probs=27.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+..++.++++||.+||..+|.+|++     +.++.+
T Consensus       246 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~l~~  277 (291)
T 1u46_A          246 RPEDCPQDIYNVMVQCWAHKPEDRPT-----FVALRD  277 (291)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCcCcCHHHHHHHHHHccCCcccCcC-----HHHHHH
Confidence            34568999999999999999999998     477764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=93.83  E-value=0.02  Score=38.89  Aligned_cols=33  Identities=6%  Similarity=-0.030  Sum_probs=27.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      +|...+.++++||++||+.+|.+|++     +.++++|
T Consensus       237 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~ll~~  269 (289)
T 4fvq_A          237 LPAPKAAELANLINNCMDYEPDHRPS-----FRAIIRD  269 (289)
T ss_dssp             CCCCSSCTTHHHHHHHSCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcC-----HHHHHHH
Confidence            56667889999999999999999987     4777643

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=93.81  E-value=0.04  Score=37.93  Aligned_cols=33  Identities=15%  Similarity=-0.026  Sum_probs=27.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      +|..++.++++||.+||..+|.+|++     +.+++.|
T Consensus       270 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~~l~~~  302 (313)
T 3brb_A          270 QPEDCLDELYEIMYSCWRTDPLDRPT-----FSVLRLQ  302 (313)
T ss_dssp             CBTTCCHHHHHHHHHTTCSSGGGSCC-----HHHHHHH
T ss_pred             CCccccHHHHHHHHHHcCCChhhCcC-----HHHHHHH
Confidence            45678999999999999999999997     4777643

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=93.79  E-value=0.049  Score=37.31  Aligned_cols=32  Identities=9%  Similarity=0.070  Sum_probs=27.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++++||++||..+|.+|++     +.+|.+
T Consensus       269 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~  300 (313)
T 1t46_A          269 SPEHAPAEMYDIMKTCWDADPLKRPT-----FKQIVQ  300 (313)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CcccCCHHHHHHHHHHcCCCchhCcC-----HHHHHH
Confidence            35668999999999999999999997     477764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=93.73  E-value=0.049  Score=38.94  Aligned_cols=33  Identities=6%  Similarity=-0.005  Sum_probs=28.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.++++||++||..+|.+|++     +.+|+++
T Consensus       314 ~~~~~~~~l~~li~~~l~~dP~~Rps-----~~ell~~  346 (382)
T 3tt0_A          314 KPSNCTNELYMMMRDCWHAVPSQRPT-----FKQLVED  346 (382)
T ss_dssp             CCSSCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCChhhCcC-----HHHHHHH
Confidence            46678999999999999999999998     4888754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=93.72  E-value=0.064  Score=36.58  Aligned_cols=31  Identities=13%  Similarity=-0.036  Sum_probs=26.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++.+||+++|..+|.+|++.     .+|.
T Consensus       253 ~~~~~~~~l~~li~~~l~~dp~~Rps~-----~el~  283 (295)
T 3ugc_A          253 RPDGCPDEIYMIMTECWNNNVNQRPSF-----RDLA  283 (295)
T ss_dssp             CCTTCCHHHHHHHHHHSCSSGGGSCCH-----HHHH
T ss_pred             CCcCcCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence            466789999999999999999999984     6665

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=93.64  E-value=0.072  Score=36.30  Aligned_cols=31  Identities=13%  Similarity=-0.087  Sum_probs=26.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +|..++.++++||++||..+|.+|++.     .+|.
T Consensus       241 ~~~~~~~~l~~li~~~l~~dp~~Rps~-----~~l~  271 (291)
T 1xbb_A          241 CPAGCPREMYDLMNLCWTYDVENRPGF-----AAVE  271 (291)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence            567789999999999999999999984     6665

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=93.61  E-value=0.054  Score=37.67  Aligned_cols=32  Identities=9%  Similarity=-0.102  Sum_probs=27.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +|..++.++++||++||..+|.+|++     +.+|.+
T Consensus       297 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~~~~  328 (343)
T 1luf_A          297 CPENCPLELYNLMRLCWSKLPADRPS-----FCSIHR  328 (343)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcccCcccCCC-----HHHHHH
Confidence            56778999999999999999999997     477753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=93.52  E-value=0.074  Score=36.89  Aligned_cols=31  Identities=10%  Similarity=-0.099  Sum_probs=27.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||++||..+|.+|++.     .++.
T Consensus       272 ~~~~~~~~l~~li~~~l~~dP~~Rps~-----~ell  302 (318)
T 3lxp_A          272 RPDKCPAEVYHLMKNCWETEASFRPTF-----ENLI  302 (318)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             CCccccHHHHHHHHHHcCCCcccCcCH-----HHHH
Confidence            456789999999999999999999984     7765

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=93.42  E-value=0.08  Score=35.96  Aligned_cols=31  Identities=6%  Similarity=0.063  Sum_probs=26.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||++||..+|.+|++     +.++.
T Consensus       249 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~ll  279 (298)
T 3pls_A          249 QPEYCPDSLYQVMQQCWEADPAVRPT-----FRVLV  279 (298)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCccchHHHHHHHHHHccCChhhCcC-----HHHHH
Confidence            45668999999999999999999997     46665

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=93.41  E-value=0.082  Score=35.73  Aligned_cols=31  Identities=10%  Similarity=-0.070  Sum_probs=26.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..+++++++||+++|..+|.+|++     +.++.
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~l~  265 (278)
T 1byg_A          235 APDGCPPAVYEVMKNCWHLDAAMRPS-----FLQLR  265 (278)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CcccCCHHHHHHHHHHhcCChhhCCC-----HHHHH
Confidence            45678999999999999999999997     46654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=93.25  E-value=0.084  Score=36.69  Aligned_cols=31  Identities=13%  Similarity=-0.031  Sum_probs=26.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||++||..+|.+|++     +.+|.
T Consensus       284 ~~~~~~~~l~~li~~cl~~dP~~Rps-----~~el~  314 (326)
T 2w1i_A          284 RPDGCPDEIYMIMTECWNNNVNQRPS-----FRDLA  314 (326)
T ss_dssp             CCTTCCHHHHHHHHHHSCSSGGGSCC-----HHHHH
T ss_pred             CCCcccHHHHHHHHHHcCCChhhCcC-----HHHHH
Confidence            45678999999999999999999998     46665

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=93.00  E-value=0.077  Score=36.83  Aligned_cols=32  Identities=9%  Similarity=0.045  Sum_probs=27.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|...+.++++||.+||..+|.+|++     +.+|.+
T Consensus       288 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~l~~  319 (333)
T 2i1m_A          288 QPAFAPKNIYSIMQACWALEPTHRPT-----FQQICS  319 (333)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhccChhhCcC-----HHHHHH
Confidence            45668899999999999999999998     477764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=92.96  E-value=0.1  Score=35.14  Aligned_cols=31  Identities=13%  Similarity=0.068  Sum_probs=26.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||++||..+|.+|++     +.++.
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~l~  261 (279)
T 1qpc_A          231 RPDNCPEELYQLMRLCWKERPEDRPT-----FDYLR  261 (279)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CcccccHHHHHHHHHHhccChhhCCC-----HHHHH
Confidence            45678999999999999999999997     46665

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=92.85  E-value=0.074  Score=36.74  Aligned_cols=32  Identities=19%  Similarity=0.058  Sum_probs=26.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ++..++.++++||.+||..+|.+|++.    ++++.
T Consensus       257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s----~~~l~  288 (309)
T 2h34_A          257 VRPGIPVAFDAVIARGMAKNPEDRYVT----CGDLS  288 (309)
T ss_dssp             TSTTCCTHHHHHHHHHTCSSGGGSCSS----HHHHH
T ss_pred             cCCCCCHHHHHHHHHhccCCHHHHHHh----HHHHH
Confidence            345689999999999999999999954    46654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=92.74  E-value=0.079  Score=36.62  Aligned_cols=32  Identities=16%  Similarity=0.092  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ++..++.++++||.+||..+|.+|++     +.+|.+
T Consensus       225 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~  256 (307)
T 2eva_A          225 LIKNLPKPIESLMTRCWSKDPSQRPS-----MEEIVK  256 (307)
T ss_dssp             CBTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             cccccCHHHHHHHHHHhcCChhhCcC-----HHHHHH
Confidence            34568999999999999999999997     477764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=92.69  E-value=0.09  Score=36.67  Aligned_cols=33  Identities=6%  Similarity=-0.009  Sum_probs=28.0

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|..++.++++||++||..+|.+|++     +.+|..+
T Consensus       280 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~~  312 (334)
T 2pvf_A          280 KPANCTNELYMMMRDCWHAVPSQRPT-----FKQLVED  312 (334)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcC-----HHHHHHH
Confidence            45678999999999999999999997     4777643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=92.66  E-value=0.16  Score=35.30  Aligned_cols=44  Identities=11%  Similarity=0.122  Sum_probs=32.7

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhc----------CCCCCCCChhHHhcCCCCCCc
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKK----------QAFFRHIQWEELLHRRVKPPF   60 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~----------h~ff~~i~w~~l~~~~~~pp~   60 (111)
                      +++++||..||..+|.+|++.     .+|.+          ..+...++|+   .+.+++|+
T Consensus       249 p~~~~li~~~l~~~p~~RP~~-----~~l~~~l~~~~~~~~~~~~~~~dw~---~~~~~~p~  302 (330)
T 2izr_A          249 PEMATYLRYVRRLDFFEKPDY-----DYLRKLFTDLFDRKGYMFDYEYDWI---GKQLPTPV  302 (330)
T ss_dssp             HHHHHHHHHHHHCCTTCCCCH-----HHHHHHHHHHHHHTTCCCSCCCTTT---TSCCCCCC
T ss_pred             hHHHHHHHHHHhCCCCCCCCH-----HHHHHHHHHHHHHcCCCCCCCccCC---CCCcCCCC
Confidence            399999999999999999984     54432          3445578997   35666665

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=92.55  E-value=0.094  Score=37.43  Aligned_cols=32  Identities=6%  Similarity=-0.019  Sum_probs=27.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++++||.++|..+|.+|++     +.+|.+
T Consensus       326 ~~~~~~~~l~~li~~~l~~dP~~Rpt-----~~ell~  357 (370)
T 2psq_A          326 KPANCTNELYMMMRDCWHAVPSQRPT-----FKQLVE  357 (370)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcC-----HHHHHH
Confidence            56678999999999999999999987     477764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=92.46  E-value=0.13  Score=35.90  Aligned_cols=31  Identities=6%  Similarity=-0.106  Sum_probs=26.8

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++.+||.+||..+|.+|++     +.+|.
T Consensus       275 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~eil  305 (325)
T 3kul_A          275 APMGCPHALHQLMLDCWHKDRAQRPR-----FSQIV  305 (325)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCCcCHHHHHHHHHHccCChhhCcC-----HHHHH
Confidence            45678999999999999999999997     46665

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=92.28  E-value=0.11  Score=36.22  Aligned_cols=33  Identities=3%  Similarity=-0.149  Sum_probs=28.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .|...+.++.+||.++|+.+|.+|++     +.++..|
T Consensus       240 ~~~~~~~~~~~li~~~l~~~p~~Rps-----~~ell~~  272 (327)
T 3poz_A          240 QPPICTIDVYMIMVKCWMIDADSRPK-----FRELIIE  272 (327)
T ss_dssp             CCTTBCHHHHHHHHHHTCSCGGGSCC-----HHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCChhhCCC-----HHHHHHH
Confidence            45678999999999999999999998     4777654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=92.20  E-value=0.14  Score=36.50  Aligned_cols=32  Identities=6%  Similarity=0.043  Sum_probs=27.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ..|..++.++.+||.++|..+|.+|++     +.+|.
T Consensus       335 ~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~~i~  366 (377)
T 3cbl_A          335 PCPELCPDAVFRLMEQCWAYEPGQRPS-----FSTIY  366 (377)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcC-----HHHHH
Confidence            356778999999999999999999997     46664

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=92.19  E-value=0.14  Score=34.93  Aligned_cols=29  Identities=14%  Similarity=0.011  Sum_probs=25.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ..++++.++||.+||..+|.+|++.     .+++
T Consensus       252 ~~~~~~l~~li~~~l~~~p~~Rps~-----~ell  280 (289)
T 3og7_A          252 SNCPKRMKRLMAECLKKKRDERPSF-----PRIL  280 (289)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCH-----HHHH
Confidence            4688999999999999999999974     6665

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=92.17  E-value=0.14  Score=35.69  Aligned_cols=32  Identities=3%  Similarity=-0.126  Sum_probs=27.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++.+||++||..+|.+|++     +.++..
T Consensus       240 ~~~~~~~~l~~li~~~l~~dp~~Rps-----~~ell~  271 (327)
T 3lzb_A          240 QPPICTIDVYMIMRKCWMIDADSRPK-----FRELII  271 (327)
T ss_dssp             CCTTBCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCChhHCcC-----HHHHHH
Confidence            45678999999999999999999998     477764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=92.16  E-value=0.15  Score=34.66  Aligned_cols=31  Identities=10%  Similarity=0.053  Sum_probs=26.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||+++|..+|.+|++     +.+++
T Consensus       253 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~ell  283 (298)
T 3f66_A          253 QPEYCPDPLYEVMLKCWHPKAEMRPS-----FSELV  283 (298)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCChhhCcC-----HHHHH
Confidence            35668999999999999999999997     46665

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=92.14  E-value=0.2  Score=35.42  Aligned_cols=53  Identities=4%  Similarity=-0.125  Sum_probs=31.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhh----------cCCCCCCCChhHHhcCCCCCCccc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVK----------KQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~----------~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      ..++.+..+||..+|..+|.+|++.     .+|+          ...+-..+||..+.+....+|..+
T Consensus       293 ~~~~~~~~~li~~cl~~~p~~RP~~-----~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~~~~~~~~~  355 (364)
T 3op5_A          293 ANAPGEIAKYMETVKLLDYTEKPLY-----ENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTIT  355 (364)
T ss_dssp             TCCCHHHHHHHHHHHTCCTTCCCCH-----HHHHHHHHHHHHHTTCCCCCCCCC--------------
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCCCH-----HHHHHHHHHHHHHcCCCcCCccceEeccCCccchhhhh
Confidence            4578999999999999999999984     5543          345566788887776666555443

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=92.11  E-value=0.13  Score=34.78  Aligned_cols=25  Identities=0%  Similarity=-0.363  Sum_probs=22.9

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      ..+++++++||++||..+|.+|++.
T Consensus       244 ~~~~~~l~~li~~~l~~dp~~Rps~  268 (296)
T 3uzp_A          244 KGYPSEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             TTSCHHHHHHHHHHHTSCTTCCCCH
T ss_pred             hhCCHHHHHHHHHHHhcCcCcCCCH
Confidence            5689999999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=91.99  E-value=0.14  Score=35.12  Aligned_cols=26  Identities=8%  Similarity=0.004  Sum_probs=23.3

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      +..++..+.++|.++|.++|.+|+.+
T Consensus       237 ~~~~~~~l~~li~~~l~~dp~~R~~~  262 (294)
T 4eqm_A          237 RKDIPQSLSNVILRATEKDKANRYKT  262 (294)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCSS
T ss_pred             ccCCCHHHHHHHHHHhcCCHhHcccc
Confidence            45689999999999999999999975

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=91.68  E-value=0.12  Score=35.53  Aligned_cols=30  Identities=17%  Similarity=0.094  Sum_probs=26.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..++.++++||++||..||.+|++     +.+|..
T Consensus       261 ~~~~~~l~~li~~~l~~dp~~Rps-----~~~il~  290 (310)
T 2wqm_A          261 DHYSEELRQLVNMCINPDPEKRPD-----VTYVYD  290 (310)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             cccCHHHHHHHHHHcCCChhhCCC-----HHHHHH
Confidence            458999999999999999999998     477763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=91.63  E-value=0.13  Score=35.95  Aligned_cols=32  Identities=9%  Similarity=-0.030  Sum_probs=27.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++++||.+||..+|.+|++     +.+|.+
T Consensus       271 ~~~~~~~~l~~li~~~l~~~p~~Rps-----~~~l~~  302 (333)
T 1mqb_A          271 TPMDCPSAIYQLMMQCWQQERARRPK-----FADIVS  302 (333)
T ss_dssp             CCTTCBHHHHHHHHHHTCSSTTTSCC-----HHHHHH
T ss_pred             CcccCCHHHHHHHHHHcCCChhhCcC-----HHHHHH
Confidence            35568899999999999999999998     477764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=91.63  E-value=0.17  Score=37.04  Aligned_cols=32  Identities=9%  Similarity=-0.034  Sum_probs=27.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ..|..+++++.+||+++|..+|.+|++.     .+|.
T Consensus       406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~-----~~l~  437 (450)
T 1k9a_A          406 DAPDGCPPAVYDVMKNCWHLDAATRPTF-----LQLR  437 (450)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCH-----HHHH
Confidence            3567799999999999999999999984     6654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=91.42  E-value=0.18  Score=37.44  Aligned_cols=32  Identities=16%  Similarity=0.118  Sum_probs=27.6

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ..|..++.++++||.+||+.+|.+|++     +.+|.
T Consensus       439 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~el~  470 (495)
T 1opk_A          439 ERPEGCPEKVYELMRACWQWNPSDRPS-----FAEIH  470 (495)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCcChhHCcC-----HHHHH
Confidence            356778999999999999999999998     47765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=91.36  E-value=0.19  Score=36.81  Aligned_cols=33  Identities=21%  Similarity=0.050  Sum_probs=28.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..|..++.++.+||.+||..+|.+|++     +.+|..
T Consensus       401 ~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~~l~~  433 (452)
T 1fmk_A          401 PCPPECPESLHDLMCQCWRKEPEERPT-----FEYLQA  433 (452)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCcC-----HHHHHH
Confidence            356778999999999999999999998     477753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=91.33  E-value=0.087  Score=36.32  Aligned_cols=31  Identities=29%  Similarity=0.272  Sum_probs=26.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ...+..+++||++||+.+|.+|++     +.+++.|
T Consensus       272 ~~~~~~~~~li~~~l~~~p~~Rps-----~~e~l~~  302 (337)
T 3ll6_A          272 DTQYTVFHSLIRAMLQVNPEERLS-----IAEVVHQ  302 (337)
T ss_dssp             CCSSGGGHHHHHHHSCSSGGGSCC-----HHHHHHH
T ss_pred             cccchHHHHHHHHHccCChhhCcC-----HHHHHHH
Confidence            346778999999999999999997     5888866

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=91.29  E-value=0.12  Score=35.56  Aligned_cols=32  Identities=9%  Similarity=-0.085  Sum_probs=27.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      +|..+++++.+||.++|..+|.+|++     +.++.+
T Consensus       244 ~~~~~~~~l~~li~~~l~~dP~~Rps-----~~~l~~  275 (310)
T 3s95_A          244 CPPNCPPSFFPITVRCCDLDPEKRPS-----FVKLEH  275 (310)
T ss_dssp             CCTTCCTTHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcC-----HHHHHH
Confidence            36678899999999999999999998     477764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=91.06  E-value=0.19  Score=34.50  Aligned_cols=29  Identities=10%  Similarity=-0.114  Sum_probs=25.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..++.++++||.+||.+||.+| +     +.++.+
T Consensus       230 ~~~~~~l~~li~~~l~~dP~~R-s-----~~el~~  258 (286)
T 3uqc_A          230 RDIPFQISAVAARSVQGDGGIR-S-----ASTLLN  258 (286)
T ss_dssp             TTSCHHHHHHHHHHHCTTSSCC-C-----HHHHHH
T ss_pred             cCCCHHHHHHHHHHcccCCccC-C-----HHHHHH
Confidence            5689999999999999999999 6     477653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=90.98  E-value=0.22  Score=36.46  Aligned_cols=31  Identities=16%  Similarity=0.069  Sum_probs=26.9

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++.+||.+||..+|.+|++     +.+|.
T Consensus       406 ~~~~~~~~l~~li~~cl~~dp~~RPt-----~~~i~  436 (454)
T 1qcf_A          406 RPENCPEELYNIMMRCWKNRPEERPT-----FEYIQ  436 (454)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcC-----HHHHH
Confidence            46678999999999999999999998     46665

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=90.96  E-value=0.061  Score=37.24  Aligned_cols=29  Identities=31%  Similarity=0.163  Sum_probs=24.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ++.++++||.++|..||.+|++     +.+|++|
T Consensus       297 ~~~~l~~li~~~l~~dP~~Rps-----~~ell~~  325 (337)
T 3mdy_A          297 CLRQMGKLMTECWAHNPASRLT-----ALRVKKT  325 (337)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCC-----HHHHHHH
T ss_pred             HHHHHHHHHHHhhhhChhhCCC-----HHHHHHH
Confidence            4567999999999999999998     4777654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=90.82  E-value=0.067  Score=37.03  Aligned_cols=29  Identities=14%  Similarity=-0.008  Sum_probs=24.9

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .+.++.+||.+||+.+|.+|++     +.+|.+|
T Consensus       277 ~~~~l~~li~~cl~~dP~~Rps-----~~ell~~  305 (326)
T 3uim_A          277 EVEQLIQVALLCTQSSPMERPK-----MSEVVRM  305 (326)
T ss_dssp             HHHHHHHHHHHHTCSCGGGSCC-----HHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCccCCC-----HHHHHHH
Confidence            3478999999999999999998     4888765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=90.67  E-value=0.2  Score=35.92  Aligned_cols=32  Identities=9%  Similarity=0.052  Sum_probs=27.4

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++.+||.+||..+|.+|++     +.++.+
T Consensus       317 ~p~~~~~~l~~li~~cl~~dp~~RPs-----~~ell~  348 (373)
T 3c1x_A          317 QPEYCPDPLYEVMLKCWHPKAEMRPS-----FSELVS  348 (373)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcC-----HHHHHH
Confidence            45678999999999999999999997     477764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=90.17  E-value=0.093  Score=35.68  Aligned_cols=28  Identities=29%  Similarity=0.208  Sum_probs=23.6

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+.++++||++||..||.+|+++     .+|++
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~-----~~i~~  295 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTA-----LRIKK  295 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCH-----HHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCH-----HHHHH
Confidence            45789999999999999999984     77653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=90.11  E-value=0.082  Score=36.60  Aligned_cols=29  Identities=17%  Similarity=-0.091  Sum_probs=24.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .+.++.+||.+||..+|.+|++     +.++..|
T Consensus       281 ~~~~l~~li~~~l~~dP~~Rps-----~~ell~~  309 (321)
T 2qkw_B          281 SLRKFGDTAVKCLALSSEDRPS-----MGDVLWK  309 (321)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcC-----HHHHHHH
Confidence            4567899999999999999998     4777654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=89.99  E-value=0.29  Score=36.75  Aligned_cols=32  Identities=22%  Similarity=0.059  Sum_probs=27.6

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .|..++.++++||.+||..+|.+|++     +.+|+.
T Consensus       485 ~~~~~~~~l~~li~~cl~~dP~~RPt-----~~~l~~  516 (535)
T 2h8h_A          485 CPPECPESLHDLMCQCWRKEPEERPT-----FEYLQA  516 (535)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcC-----HHHHHH
Confidence            46678999999999999999999998     477753

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=89.78  E-value=0.22  Score=34.43  Aligned_cols=27  Identities=19%  Similarity=0.165  Sum_probs=22.9

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .++++++||.+||..||.+|++     +.+++
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps-----~~e~l  310 (336)
T 3g2f_A          284 AVRSLKETIEDCWDQDAEARLT-----AQXAE  310 (336)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCC-----HHHHH
T ss_pred             hHHHHHHHHHHHhcCChhhCcc-----hHHHH
Confidence            4458999999999999999998     47774

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=89.73  E-value=0.31  Score=37.74  Aligned_cols=32  Identities=13%  Similarity=0.003  Sum_probs=27.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .+|..++.++.+||.+||..+|.+|++     +.+|+
T Consensus       612 ~~~~~~~~~l~~li~~~l~~dP~~RPs-----~~el~  643 (656)
T 2j0j_A          612 PMPPNCPPTLYSLMTKCWAYDPSRRPR-----FTELK  643 (656)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCccccHHHHHHHHHHcCCChhHCcC-----HHHHH
Confidence            356789999999999999999999997     47765

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=89.62  E-value=0.094  Score=37.69  Aligned_cols=28  Identities=11%  Similarity=0.044  Sum_probs=23.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .++...++||++||+.||++|++.     .++.
T Consensus       274 ~~~~~l~~ll~~~L~~dP~~R~s~-----~e~l  301 (396)
T 4eut_A          274 GLQVLLTPVLANILEADQEKCWGF-----DQFF  301 (396)
T ss_dssp             HHHHHHHHHHHHHSCCCTTTSCCH-----HHHH
T ss_pred             HHHhhchHHHHHhhccChhhhccH-----HHHH
Confidence            356788999999999999999984     6653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=89.52  E-value=0.32  Score=34.07  Aligned_cols=28  Identities=4%  Similarity=-0.282  Sum_probs=25.0

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .++.++++||.+||..+|.+|++     +.+|.
T Consensus       293 ~~~~~l~~li~~~l~~dp~~Rps-----~~~l~  320 (345)
T 2v62_A          293 SSCCEIAQFLVCAHSLAYDEKPN-----YQALK  320 (345)
T ss_dssp             SCCHHHHHHHHHHHTCCTTCCCC-----HHHHH
T ss_pred             ccHHHHHHHHHHHhhcCcccCCC-----HHHHH
Confidence            68899999999999999999998     47765

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=89.41  E-value=0.29  Score=34.33  Aligned_cols=28  Identities=11%  Similarity=-0.060  Sum_probs=24.5

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .++.++++||++||..+|.+|++.     .+|.
T Consensus       301 ~~~~~l~~li~~~l~~dp~~Rps~-----~~l~  328 (352)
T 2jii_A          301 RPSETLQKYLKVVMALTYEEKPPY-----AMLR  328 (352)
T ss_dssp             CCCHHHHHHHHHHHTCCTTCCCCH-----HHHH
T ss_pred             CCcHHHHHHHHHHHhCChhhCCCH-----HHHH
Confidence            468999999999999999999984     6664

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=89.34  E-value=0.36  Score=37.25  Aligned_cols=32  Identities=13%  Similarity=-0.084  Sum_probs=27.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .+|..++.++.+||++||..+|.+|++.     .+|+
T Consensus       592 ~~p~~~~~~l~~li~~cl~~dP~~RPs~-----~~l~  623 (635)
T 4fl3_A          592 GCPAGCPREMYDLMNLCWTYDVENRPGF-----AAVE  623 (635)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHhHCcCH-----HHHH
Confidence            3577899999999999999999999984     6664

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=88.41  E-value=0.14  Score=35.04  Aligned_cols=28  Identities=14%  Similarity=0.124  Sum_probs=23.5

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+....+||.+||..+|.+|++     +.+|.+
T Consensus       272 ~~~~l~~li~~cl~~~p~~Rps-----~~~l~~  299 (307)
T 2nru_A          272 SVEAMYSVASQCLHEKKNKRPD-----IKKVQQ  299 (307)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCC-----HHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcC-----HHHHHH
Confidence            4567899999999999999998     477764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=87.89  E-value=0.27  Score=34.13  Aligned_cols=26  Identities=23%  Similarity=0.139  Sum_probs=21.9

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +.++++||++||..||.+|+++     .+|.
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~-----~ell  310 (322)
T 3soc_A          285 MAMLCETIEECWDHDAEARLSA-----GCVG  310 (322)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCH-----HHHH
T ss_pred             HHHHHHHHHHHccCChhhCcCH-----HHHH
Confidence            3459999999999999999984     6665

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=87.73  E-value=0.31  Score=33.35  Aligned_cols=29  Identities=10%  Similarity=-0.133  Sum_probs=25.1

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .++.++++||.+||..+|.+|++     +.++.+
T Consensus       267 ~~~~~l~~li~~~l~~~p~~Rpt-----~~~l~~  295 (319)
T 2y4i_B          267 GMGKEISDILLFCWAFEQEERPT-----FTKLMD  295 (319)
T ss_dssp             SCCTTHHHHHHHHHCSSTTTSCC-----HHHHHH
T ss_pred             CCCHHHHHHHHHHhcCChhhCcC-----HHHHHH
Confidence            57889999999999999999997     477763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=87.51  E-value=0.52  Score=33.59  Aligned_cols=30  Identities=10%  Similarity=-0.038  Sum_probs=25.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      |..++.+..+||.+||..+|.+|++     +.+|.
T Consensus       272 ~~~~~~~l~~li~~cl~~dp~~RPs-----~~~i~  301 (373)
T 2qol_A          272 PMDCPAALYQLMLDCWQKDRNNRPK-----FEQIV  301 (373)
T ss_dssp             CTTCBHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CccccHHHHHHHHHHhCcChhhCcC-----HHHHH
Confidence            4568899999999999999999997     46665

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=87.50  E-value=0.53  Score=36.05  Aligned_cols=28  Identities=7%  Similarity=-0.266  Sum_probs=25.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGS   29 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~   29 (111)
                      .+|..++.++.+||.++|..+|.+|++.
T Consensus       559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~  586 (613)
T 2ozo_A          559 ECPPECPPELYALMSDCWIYKWEDRPDF  586 (613)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSTTTSCCH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCH
Confidence            4677899999999999999999999984

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=86.56  E-value=0.34  Score=33.52  Aligned_cols=28  Identities=29%  Similarity=0.150  Sum_probs=23.4

Q ss_pred             CHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           8 GEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         8 s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      +...++||.+||..+|.+|++     +.+|.+|
T Consensus       303 ~~~l~~li~~cl~~dp~~Rps-----~~~i~~~  330 (342)
T 1b6c_B          303 LRVMAKIMRECWYANGAARLT-----ALRIKKT  330 (342)
T ss_dssp             HHHHHHHHHHHCCSSGGGSCC-----HHHHHHH
T ss_pred             HHHHHHHHHHHhccChhhCCC-----HHHHHHH
Confidence            357889999999999999998     4777654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=82.68  E-value=0.38  Score=37.16  Aligned_cols=33  Identities=6%  Similarity=0.076  Sum_probs=27.8

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+....+||.+||..||.+|+++     .+.+.|+|+.
T Consensus       293 ~~~~l~~li~~~l~~dP~~R~~~-----~~~l~~~l~~  325 (681)
T 2pzi_A          293 TYDSYGRLLRRAIDPDPRQRFTT-----AEEMSAQLTG  325 (681)
T ss_dssp             HCHHHHHHHHHHTCSSGGGSCSS-----HHHHHHHHHH
T ss_pred             cCHHHHHHHhhhccCChhhCCCH-----HHHHHHHHHH
Confidence            46789999999999999999986     6777777764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	111
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-31
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-24
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-22
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-19
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-19
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-15
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.003

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 6e-31
 Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 6/101 (5%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
             LL+K+P++RLG    DA++V +  FF  I W++++ +++ PPF P VT   D   FD+
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

Query: 76  EFTSEKPELTPPKDPRPL------TDDEQNLFKDFTYMADW 110
           EFT++   +TPP     L        +EQ +F+DF Y+ADW
Sbjct: 297 EFTAQSITITPPDRYDSLGLLELDQREEQEMFEDFDYIADW 337

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 1e-24
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 5/91 (5%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
            +L  + PE+RLG       D+++   FR I WEEL  + + PPF P V    D SNFD+
Sbjct: 235 VKLFVREPEKRLGV----RGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK 290

Query: 76  EFTSEKPELTPPKDPRPLTDDEQNLFKDFTY 106
           EF +EKP L+   D   +   +QN+F++F++
Sbjct: 291 EFLNEKPRLSFA-DRALINSMDQNMFRNFSF 320

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 85.9 bits (212), Expect = 8e-22
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 15/99 (15%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVP-----TVTDVGDV 70
           + LL+++  RRLG   R A++VK+  FFR + W+ +  ++  PP +P        D  D+
Sbjct: 241 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDI 300

Query: 71  SNFDEEFTSEKPELTPPKDPRPLTDDEQNLFKDFTYMAD 109
            +FDEE T              L D +Q L+++F     
Sbjct: 301 GSFDEEDTKGI----------KLLDSDQELYRNFPLTIS 329

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.6 bits (193), Expect = 2e-19
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTD-VGDVSNFD 74
             L+ ++  +RLG+ +   EDVK   +F+ + WE+LL R ++ P+ P +    GD S FD
Sbjct: 233 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFD 292

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
           +    +       +DP        +LF+DF
Sbjct: 293 KYPEEDINYGVQGEDPY------ADLFRDF 316

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.9 bits (191), Expect = 4e-19
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 15  WKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFD 74
            + LL+ +  +R G+ +    D+K   +F    W  +  R+V+ PF+P     GD SNFD
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328

Query: 75  EEFTSEKPELTPPKDPRPLTDDEQNLFKDF 104
            ++  E+  ++         +     F +F
Sbjct: 329 -DYEEEEIRVSI-------NEKCGKEFTEF 350

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 5e-15
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDV 70
           + LL K+P++RLG   RDA+++K+  FF+ I W++L  ++V  PF P + D  DV
Sbjct: 268 QRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDV 322

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 9e-07
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)

Query: 16  KELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVP 62
           ++LL  +  +RLG  E      +K   FF  + WE L   +  PP + 
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL--HQQTPPKLT 287

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 1e-04
 Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 13/75 (17%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
             LL   P  RL        +    +FF  ++             +P   D   + NF  
Sbjct: 284 SRLLEYTPTARL-----TPLEACAHSFFDELRDPN--------VKLPNGRDTPALFNFTT 330

Query: 76  EFTSEKPELTPPKDP 90
           +  S  P L     P
Sbjct: 331 QELSSNPPLATILIP 345

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 2e-04
 Identities = 8/44 (18%), Positives = 19/44 (43%), Gaps = 5/44 (11%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPP 59
           + LL K+P++R+       +D  +  + +    ++ L      P
Sbjct: 252 RRLLVKDPKKRMT-----IQDSLQHPWIKPKDTQQALSSAWSHP 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (75), Expect = 0.003
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 16  KELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE 75
             +L+ +P +R      DA  +    + +    + L    ++ P         D+  + E
Sbjct: 309 SPMLQLDPRKRA-----DAGGLVNHPWLK----DTLGMEEIRVPDRELYGSGSDIPGWFE 359

Query: 76  E 76
           E
Sbjct: 360 E 360

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	111
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.88
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.8
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.67
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.67
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.66
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.55
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.25
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.83
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.81
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	98.67
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.57
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	98.54
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.49
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.44
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.44
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.41
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.34
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	98.34
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.32
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	98.3
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.3
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	98.29
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	98.27
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.26
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.24
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	98.23
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.23
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.21
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.2
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	98.18
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.16
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.09
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	97.98
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	97.98
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.85
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.84
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	97.15
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	96.61
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	96.58
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	96.55
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	96.49
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	96.37
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	96.32
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	96.27
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	96.11
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	95.91
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	95.81
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	95.76
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	95.72
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	95.68
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	95.55
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	95.26
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	95.21
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	95.12
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	95.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	94.71
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	94.63
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	94.59
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	94.4
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	93.82
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	81.15

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.7e-23  Score=147.14  Aligned_cols=110  Identities=35%  Similarity=0.698  Sum_probs=88.9

Q ss_pred             CCCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCC
Q psy3349           1 MDDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSE   80 (111)
Q Consensus         1 ~~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~   80 (111)
                      +.+|..+|+++++||++||++||.+|+++...++.+|++||||++++|+.+..+++.||++|.+.+..++++|+.+++.+
T Consensus       222 ~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~~~~~~~~~~f~~~~~~~  301 (337)
T d1o6la_         222 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQ  301 (337)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCHHHHTS
T ss_pred             CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCHHHHHhCCCCCCCCCCCCChhhhhhcCchhhhc
Confidence            36889999999999999999999999997666789999999999999999999999999999999999999999998887


Q ss_pred             CCCCCCCCCCC------CCChhhcCCCCCceeccCC
Q psy3349          81 KPELTPPKDPR------PLTDDEQNLFKDFTYMADW  110 (111)
Q Consensus        81 ~~~~~~~~~~~------~~~~~~~~~F~~Fsy~~~~  110 (111)
                      ....++++...      ......+..|.+|+|+++|
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~f~~v~d~  337 (337)
T d1o6la_         302 SITITPPDRYDSLGLLELDQREEQEMFEDFDYIADW  337 (337)
T ss_dssp             CCC--------------------CCTTTTCCEECCC
T ss_pred             cCCCCCCccccccccccccchhhhhccCCCEeeCCC
Confidence            76655543221      1123467899999999987

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.5e-20  Score=133.46  Aligned_cols=100  Identities=35%  Similarity=0.687  Sum_probs=57.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCccccCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDEEFTSEK   81 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~   81 (111)
                      .+|..+|+++++||++||++||.+|+++    ..++++||||++++|+.+..+++.||++|.+++..|+++|+.++..+.
T Consensus       221 ~~p~~~s~~~~dli~~~L~~dP~~R~s~----~~~l~~hpff~~~~~~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~  296 (320)
T d1xjda_         221 FYPRWLEKEAKDLLVKLFVREPEKRLGV----RGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEK  296 (320)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSBTT----BSCGGGSGGGTTCCHHHHHTTCSCC-----------------------
T ss_pred             CCCccCCHHHHHHHHHhcccCCCCCcCH----HHHHHhCchhccCCHHHHHhcCCCCCCCCCCCCccchhhcChHhhhCC
Confidence            4788899999999999999999999985    248999999999999999999999999999999999999999887776


Q ss_pred             CCCCCCCCCCCCChhhcCCCCCcee
Q psy3349          82 PELTPPKDPRPLTDDEQNLFKDFTY  106 (111)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~F~~Fsy  106 (111)
                      +..+.... ......+++.|.||||
T Consensus       297 ~~~~~~~~-~~~~~~~~~~f~~f~~  320 (320)
T d1xjda_         297 PRLSFADR-ALINSMDQNMFRNFSF  320 (320)
T ss_dssp             ----------------CCTTTTCCC
T ss_pred             ccCCCCcc-cccCchhhcccCcCcC
Confidence            66554322 2344467889999998

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=7.6e-17  Score=113.91  Aligned_cols=97  Identities=30%  Similarity=0.585  Sum_probs=66.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCC-CCCCCCCCccccCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTD-VGDVSNFDEEFTSE   80 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~-~~d~~~f~~~~~~~   80 (111)
                      .+|..+|+++++||++||++||.+|+++....+++|++||||++++|+.+..+++.||++|.+.. ..|+++|+. +..+
T Consensus       219 ~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~~~~~~~d~~~f~~-~~~~  297 (316)
T d1fota_         219 RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDK-YPEE  297 (316)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC-----------------
T ss_pred             CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHHHHHhCCCCcCCCCCcCCCcchhhhcCC-Cccc
Confidence            57888999999999999999999999876567899999999999999999999999999998644 468899885 3333


Q ss_pred             CCCCCCCCCCCCCChhhcCCCCCc
Q psy3349          81 KPELTPPKDPRPLTDDEQNLFKDF  104 (111)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~F~~F  104 (111)
                      ......     ...+...++|.+|
T Consensus       298 ~~~~~~-----~~~~~~~~~~~~f  316 (316)
T d1fota_         298 DINYGV-----QGEDPYADLFRDF  316 (316)
T ss_dssp             CCCTTC-----CSCCTTGGGSCCC
T ss_pred             cccCCC-----CCCCchhhhcCCC
Confidence            222211     1123345788877

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.67  E-value=5.6e-17  Score=116.59  Aligned_cols=97  Identities=30%  Similarity=0.561  Sum_probs=68.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCC-----CCCCCCcc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVG-----DVSNFDEE   76 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~-----d~~~f~~~   76 (111)
                      .+|..+|+++++||++||++||.+|+++...++++|++||||++++|..+..++++||++|......     |+++|+++
T Consensus       227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d~~~~~~~  306 (364)
T d1omwa3         227 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEE  306 (364)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC----------------
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCCCCCCCcCCccccccCChh
Confidence            4677899999999999999999999998767899999999999999999999999999999765443     34445443


Q ss_pred             ccCCCCCCCCCCCCCCCChhhcCCCCCceecc
Q psy3349          77 FTSEKPELTPPKDPRPLTDDEQNLFKDFTYMA  108 (111)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~F~~Fsy~~  108 (111)
                      .+....          ....++..|.+|++..
T Consensus       307 ~~~~~~----------~~~~~~~~~~~~~~~~  328 (364)
T d1omwa3         307 DTKGIK----------LLDSDQELYRNFPLTI  328 (364)
T ss_dssp             ----CC----------CCSSSSGGGTTCCEEC
T ss_pred             hccCCC----------CCChHHHHHhcCCccC
Confidence            332211          1223456788887753

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=1.8e-16  Score=113.39  Aligned_cols=74  Identities=26%  Similarity=0.541  Sum_probs=68.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCCCCCCCc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGDVSNFDE   75 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~f~~   75 (111)
                      .+|..+|+++++||++||++||.+|++.....+++|++||||+++||+.+..+++.|||+|...+..|++||+.
T Consensus       256 ~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~~d~s~~~~  329 (350)
T d1rdqe_         256 RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD  329 (350)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCC
T ss_pred             CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCCCCcchhhhcCC
Confidence            46788999999999999999999999765556899999999999999999999999999999999999999985

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=5.4e-15  Score=104.46  Aligned_cols=68  Identities=32%  Similarity=0.671  Sum_probs=61.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD   69 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d   69 (111)
                      .+|..+|+++++||++||..||.+|+++....++|+++||||++++|+.+..++++||++|.+++..|
T Consensus       254 ~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~~~~~~  321 (322)
T d1vzoa_         254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELD  321 (322)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CC
T ss_pred             CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCCCCCCC
Confidence            46778999999999999999999999875556899999999999999999999999999999987655

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.9e-12  Score=90.04  Aligned_cols=59  Identities=25%  Similarity=0.418  Sum_probs=47.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCC-CChHhhhcCCCCCCCChhHHhcCCCCCCccc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSE-RDAEDVKKQAFFRHIQWEELLHRRVKPPFVP   62 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~-~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p   62 (111)
                      .+|..+|+++++||++||++||.+|+++.. .....|++||||++|||+.|.++  .||-+|
T Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~--~pP~l~  287 (288)
T d1uu3a_         228 DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ--TPPKLT  287 (288)
T ss_dssp             CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGS--CCCCCC
T ss_pred             CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcC--CCCCCC
Confidence            578899999999999999999999998632 13345899999999999999654  465554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.83  E-value=7.1e-10  Score=77.35  Aligned_cols=39  Identities=23%  Similarity=0.402  Sum_probs=36.7

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      .+|++++|||++||+.||.+|++     ++|+++||||++|.|+
T Consensus       290 ~~s~~~~dli~~mL~~dP~~R~t-----a~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         290 LVSPEALDFLDKLLRYDHQSRLT-----AREAMEHPYFYTVVKD  328 (328)
T ss_dssp             GCCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGTTSCCC
T ss_pred             cCCHHHHHHHHHHccCChhHCcC-----HHHHhcCcccCCCCCC
Confidence            48999999999999999999998     5999999999999985

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=7.6e-10  Score=76.36  Aligned_cols=50  Identities=16%  Similarity=0.292  Sum_probs=34.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPP   59 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp   59 (111)
                      ..+|.++++||++||+.||.+|++     +.+|++||||++++|.........+|
T Consensus       241 ~~~s~~~~~li~~~L~~dP~~R~s-----~~eil~hp~~~~~~~~~~l~~~~~~P  290 (293)
T d1jksa_         241 SNTSALAKDFIRRLLVKDPKKRMT-----IQDSLQHPWIKPKDTQQALSSAWSHP  290 (293)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHHSTTTCC-------------C
T ss_pred             CCCCHHHHHHHHHHccCChhHCcC-----HHHHhcCcccCCCChhHhhccCCCCc
Confidence            568999999999999999999998     59999999999999987765555443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.6e-09  Score=71.49  Aligned_cols=41  Identities=20%  Similarity=0.317  Sum_probs=37.1

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      ++..+|+++++||++||+.||.+|++     +.|+++||||++|++
T Consensus       261 ~~~~~s~~~~dli~~mL~~dP~~R~s-----a~e~L~Hpff~~i~~  301 (305)
T d1blxa_         261 FVTDIDELGKDLLLKCLTFNPAKRIS-----AYSALSHPYFQDLER  301 (305)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCC-----HHHHHTSGGGTTCCC
T ss_pred             ccccCCHHHHHHHHHHCcCChhHCcC-----HHHHhcChhhcCchh
Confidence            45678999999999999999999998     599999999998864

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.57  E-value=1.6e-08  Score=70.81  Aligned_cols=57  Identities=11%  Similarity=0.120  Sum_probs=42.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhHHhcCCCCCCcccccCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEELLHRRVKPPFVPTVTDVGD   69 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~l~~~~~~pp~~p~~~~~~d   69 (111)
                      +...+++++|||.+||+.||.+|++     ++|+++||||+++.+    ...+..|..+...+..|
T Consensus       297 ~~~~~~~~~dll~~mL~~dP~~Rpt-----a~e~L~Hp~f~~~~~----~~~~~~p~~~~~~~~~~  353 (362)
T d1q8ya_         297 SKDEAKEISDFLSPMLQLDPRKRAD-----AGGLVNHPWLKDTLG----MEEIRVPDRELYGSGSD  353 (362)
T ss_dssp             CHHHHHHHHHHHGGGGCSSTTTCBC-----HHHHHTCGGGTTCTT----CTTCCCTTSCTTCBSTT
T ss_pred             CcccCHHHHHHHHHHCCCChhHCcC-----HHHHhcCcccCCCCC----cccCCCCCcccCCCCCC
Confidence            3446789999999999999999998     599999999996543    24555555555443333

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=3e-08  Score=67.56  Aligned_cols=42  Identities=12%  Similarity=0.105  Sum_probs=37.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCCh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQW   48 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w   48 (111)
                      .++..+|+++++||++||+.||++|++     ++|+++||||+++-.
T Consensus       222 ~~~~~~s~~~~~li~~~L~~dp~~R~s-----~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         222 FFRQRVSSECQHLIRWCLALRPSDRPT-----FEEIQNHPWMQDVLL  263 (273)
T ss_dssp             CCSSCCCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSGGGSSCCC
T ss_pred             CCCCCCCHHHHHHHHHHccCCHhHCcC-----HHHHhcCHhhCCCCC
Confidence            467889999999999999999999997     599999999997643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=4.4e-08  Score=66.64  Aligned_cols=38  Identities=24%  Similarity=0.429  Sum_probs=34.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+..+|+++++||++||+.||.+|++     ++|+++||||++
T Consensus       251 ~~~~~s~~~~dll~~mL~~dP~~R~s-----a~e~L~Hp~f~~  288 (292)
T d1unla_         251 VVPKLNATGRDLLQNLLKCNPVQRIS-----AEEALQHPYFSD  288 (292)
T ss_dssp             TSTTCCHHHHHHHHHHSCSSGGGSCC-----HHHHTTSGGGSS
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcC-----HHHHhcChhhcC
Confidence            34568999999999999999999998     599999999985

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.44  E-value=6.3e-08  Score=66.02  Aligned_cols=37  Identities=22%  Similarity=0.531  Sum_probs=33.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..+|++++|||++||+.||++|++     +.|+++||||+.
T Consensus       250 ~~~~s~~~~dli~~~L~~dP~~R~s-----~~ell~Hp~f~~  286 (286)
T d1ob3a_         250 LKGLDESGIDLLSKMLKLDPNQRIT-----AKQALEHAYFKE  286 (286)
T ss_dssp             CCSCCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSGGGGC
T ss_pred             cccCCHHHHHHHHHHccCChhHCcC-----HHHHhcCcccCc
Confidence            4568999999999999999999998     599999999973

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.7e-08  Score=66.43  Aligned_cols=36  Identities=22%  Similarity=0.467  Sum_probs=33.4

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      .+|++++|||++||+.||++|++     +.++++||||+++
T Consensus       254 ~~s~~~~dll~~mL~~dP~~R~t-----~~ell~H~ff~~~  289 (298)
T d1gz8a_         254 PLDEDGRSLLSQMLHYDPNKRIS-----AKAALAHPFFQDV  289 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSGGGTTC
T ss_pred             CCCHHHHHHHHHHccCChhHCcC-----HHHHhCCHhhccC
Confidence            57899999999999999999998     5999999999865

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=8.3e-08  Score=67.09  Aligned_cols=40  Identities=13%  Similarity=0.263  Sum_probs=35.3

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      ..+|++++|||++||+.||.+|++     +.+|++||||+++.+.
T Consensus       271 ~~~s~~~~dli~~mL~~dP~~R~t-----a~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         271 TNASPLAVNLLEKMLVLDAEQRVT-----AGEALAHPYFESLHDT  310 (346)
T ss_dssp             TTCCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSGGGTTTC--
T ss_pred             cCCCHHHHHHHHHHCcCChhHCcC-----HHHHhcChhhCcCCCc
Confidence            468999999999999999999998     5999999999987654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=8.8e-08  Score=65.12  Aligned_cols=38  Identities=24%  Similarity=0.311  Sum_probs=35.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      .+|..+|+++++||.+||+.||.+|++     +.++++||||.
T Consensus       222 ~~p~~~s~~~~~li~~~L~~dp~~R~t-----~~eil~hp~~~  259 (263)
T d2j4za1         222 TFPDFVTEGARDLISRLLKHNPSQRPM-----LREVLEHPWIT  259 (263)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHTCHHHH
T ss_pred             CCCccCCHHHHHHHHHHccCCHhHCcC-----HHHHHcCcCcC
Confidence            478889999999999999999999997     59999999996

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.3e-07  Score=65.33  Aligned_cols=38  Identities=13%  Similarity=0.202  Sum_probs=34.7

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .|..+|.++++||++||+.||.+|++     +.++++||||+.
T Consensus       238 ~~~~~s~~~~~li~~~L~~dP~~R~s-----~~eil~Hp~~~~  275 (293)
T d1yhwa1         238 NPEKLSAIFRDFLNRCLDMDVEKRGS-----AKELLQHQFLKI  275 (293)
T ss_dssp             SGGGSCHHHHHHHHHHTCSSTTTSCC-----HHHHTTCGGGGG
T ss_pred             CcccCCHHHHHHHHHHccCChhHCcC-----HHHHhcCHhhCC
Confidence            45679999999999999999999997     599999999973

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.8e-07  Score=65.23  Aligned_cols=37  Identities=14%  Similarity=0.293  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..+|++++|||++||+.||.+|++     +.|+++||||+.+
T Consensus       271 ~~~s~~~~dli~~mL~~dP~~R~t-----a~elL~Hp~f~~~  307 (348)
T d2gfsa1         271 IGANPLAVDLLEKMLVLDSDKRIT-----AAQALAHAYFAQY  307 (348)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHCcCChhhCcC-----HHHHhcCHhhCCC
Confidence            358999999999999999999998     5999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=98.30  E-value=1.8e-07  Score=66.00  Aligned_cols=41  Identities=15%  Similarity=0.197  Sum_probs=37.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChhH
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWEE   50 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~~   50 (111)
                      ..+|+++++||++||+.||++|++     +.++++||||...+|..
T Consensus       250 ~~~s~~~~~li~~~L~~dP~~R~t-----~~eil~hp~~~~~~~~~  290 (350)
T d1koaa2         250 SGISEDGKDFIRKLLLADPNTRMT-----IHQALEHPWLTPGNAPG  290 (350)
T ss_dssp             GGCCHHHHHHHHHHCCSSGGGSCC-----HHHHHHSTTTSCTTCCS
T ss_pred             cCCCHHHHHHHHHHccCChhHCcC-----HHHHhcCcccCCCCCCC
Confidence            458999999999999999999998     59999999999888754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.2e-07  Score=63.72  Aligned_cols=37  Identities=24%  Similarity=0.284  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      +.+|+++++||++||+.||++|++     +.|+++||||++.
T Consensus       250 ~~~s~~~~dll~~~L~~dP~~R~s-----a~e~L~Hp~f~~~  286 (299)
T d1ua2a_         250 SAAGDDLLDLIQGLFLFNPCARIT-----ATQALKMKYFSNR  286 (299)
T ss_dssp             TTCCHHHHHHHHHHHCSSTTTSCC-----HHHHHTSGGGTSS
T ss_pred             ccCCHHHHHHHHHHccCChhhCcC-----HHHHhCCHhhCCC
Confidence            357899999999999999999998     5999999999863

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.29  E-value=2.8e-07  Score=63.83  Aligned_cols=37  Identities=16%  Similarity=0.333  Sum_probs=34.0

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      +..+|+++++||++||++||.+|++     +.|+++||||++
T Consensus       233 ~~~~s~~~~~li~~~L~~dP~~R~s-----~~eil~hp~~~~  269 (307)
T d1a06a_         233 WDDISDSAKDFIRHLMEKDPEKRFT-----CEQALQHPWIAG  269 (307)
T ss_dssp             TTTSCHHHHHHHHHHSCSSGGGSCC-----HHHHHHSTTTTS
T ss_pred             ccCCCHHHHHHHHHHccCCHhHCcC-----HHHHhcCHhhCC
Confidence            3569999999999999999999998     599999999985

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.6e-08  Score=68.67  Aligned_cols=38  Identities=21%  Similarity=0.179  Sum_probs=35.1

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCCChh
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHIQWE   49 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i~w~   49 (111)
                      +|.+++|||++||+.||.+|++     ++++++||||++.+|+
T Consensus       270 ~s~~~~dli~~~L~~dP~~R~t-----a~e~L~Hpf~~~~~~~  307 (322)
T d1s9ja_         270 FSLEFQDFVNKCLIKNPAERAD-----LKQLMVHAFIKRSDAE  307 (322)
T ss_dssp             BCHHHHHHHHHHTCSSTTTSCC-----HHHHHTSHHHHHHHHS
T ss_pred             CCHHHHHHHHHHcCCChhHCcC-----HHHHhhCHhhCcCCcc
Confidence            7899999999999999999998     5999999999977765

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.3e-07  Score=65.10  Aligned_cols=37  Identities=19%  Similarity=0.273  Sum_probs=33.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..+|+++++||++||+.||++|++     +.|+++||||+.+
T Consensus       273 ~~~s~~~~dLl~~mL~~dP~~R~t-----a~e~L~Hp~f~~~  309 (350)
T d1q5ka_         273 PRTPPEAIALCSRLLEYTPTARLT-----PLEACAHSFFDEL  309 (350)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGGGG
T ss_pred             cCCCHHHHHHHHHHccCChhHCcC-----HHHHhcCHhhccc
Confidence            458999999999999999999998     5999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.24  E-value=2.6e-07  Score=63.15  Aligned_cols=36  Identities=19%  Similarity=0.310  Sum_probs=33.4

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+|+++++||++||+.+|.+|++     +.+|++||||+.
T Consensus       240 ~~~s~~~~~li~~~L~~~p~~R~s-----~~eil~h~~~~~  275 (277)
T d1phka_         240 DDYSDTVKDLVSRFLVVQPQKRYT-----AEEALAHPFFQQ  275 (277)
T ss_dssp             GGSCHHHHHHHHHHCCSSGGGSCC-----HHHHTTSGGGCT
T ss_pred             ccCCHHHHHHHHHHccCChhHCcC-----HHHHHcCHHHHH
Confidence            369999999999999999999998     599999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3e-07  Score=63.19  Aligned_cols=38  Identities=16%  Similarity=0.099  Sum_probs=34.5

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .|..+|+++++||++||+.||.+|++     +.++++||||..
T Consensus       237 ~~~~~s~~~~~li~~~L~~dp~~R~t-----~~ell~hp~~~~  274 (288)
T d2jfla1         237 QPSRWSSNFKDFLKKCLEKNVDARWT-----TSQLLQHPFVTV  274 (288)
T ss_dssp             SGGGSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTSGGGCC
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcC-----HHHHhcCcccCC
Confidence            45679999999999999999999998     599999999973

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=4.1e-07  Score=61.98  Aligned_cols=35  Identities=23%  Similarity=0.475  Sum_probs=32.7

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      ..+|+++++||++||+.||.+|++     +.+|++||||+
T Consensus       230 ~~~s~~~~~li~~~L~~dP~~R~t-----~~eil~hpwf~  264 (271)
T d1nvra_         230 KKIDSAPLALLHKILVENPSARIT-----IPDIKKDRWYN  264 (271)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCC-----HHHHTTCTTTT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcC-----HHHHhcCHhhC
Confidence            458999999999999999999997     59999999997

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.21  E-value=3.1e-07  Score=64.78  Aligned_cols=37  Identities=24%  Similarity=0.357  Sum_probs=34.2

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..+|+++++||++||++||.+|++     +.++++||||++.
T Consensus       253 ~~~s~~~~~li~~~L~~dp~~R~s-----~~eil~Hp~~~~~  289 (352)
T d1koba_         253 SSVSPEAKDFIKNLLQKEPRKRLT-----VHDALEHPWLKGD  289 (352)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHTSTTTSSC
T ss_pred             cCCCHHHHHHHHHHccCChhHCcC-----HHHHhcCHhhCCC
Confidence            569999999999999999999998     5999999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.6e-07  Score=62.97  Aligned_cols=34  Identities=24%  Similarity=0.438  Sum_probs=31.4

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+++++|||.+||+.||++|++     ++|+++||||+.
T Consensus       277 ~~~~~~dLl~~mL~~dP~~R~s-----a~elL~Hpff~~  310 (318)
T d3blha1         277 RDPYALDLIDKLLVLDPAQRID-----SDDALNHDFFWS  310 (318)
T ss_dssp             CCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSGGGSS
T ss_pred             CCHHHHHHHHHHCcCChhHCcC-----HHHHHcChhhcc
Confidence            4789999999999999999998     599999999984

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.5e-07  Score=62.25  Aligned_cols=36  Identities=22%  Similarity=0.321  Sum_probs=32.8

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR   44 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~   44 (111)
                      +..+++++++||++||+.||++|++     +.|+++||||+
T Consensus       235 ~~~~~~~~~~li~~~l~~dp~~R~s-----~~ell~Hp~fk  270 (270)
T d1t4ha_         235 DKVAIPEVKEIIEGCIRQNKDERYS-----IKDLLNHAFFQ  270 (270)
T ss_dssp             GGCCCHHHHHHHHHHSCSSGGGSCC-----HHHHHTSGGGC
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcC-----HHHHhCCcccC
Confidence            4558999999999999999999997     59999999995

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=3.9e-07  Score=63.94  Aligned_cols=35  Identities=11%  Similarity=0.298  Sum_probs=32.3

Q ss_pred             CCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           7 VGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         7 ~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      +|++++|||++||+.||++|++     ++|+++||||+..
T Consensus       283 ~s~~~~dll~~mL~~dP~~R~t-----a~elL~Hpw~~~~  317 (355)
T d2b1pa1         283 KASQARDLLSKMLVIDPAKRIS-----VDDALQHPYINVW  317 (355)
T ss_dssp             HHHHHHHHHHHHSCSSTTTSCC-----HHHHHTSTTTGGG
T ss_pred             CCHHHHHHHHHHCcCChhHCcC-----HHHHhcCcccCCC
Confidence            5789999999999999999998     5999999999964

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.1e-06  Score=61.37  Aligned_cols=37  Identities=16%  Similarity=0.334  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRHI   46 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~i   46 (111)
                      ..+|.++++||.+||+.||.+|++     +.++++||||..+
T Consensus       265 ~~~s~~~~~li~~~L~~dP~~R~t-----a~e~L~hpf~~~~  301 (345)
T d1pmea_         265 PNADSKALDLLDKMLTFNPHKRIE-----VEQALAHPYLEQY  301 (345)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCC-----HHHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHccCChhHCcC-----HHHHhcCHhhccC
Confidence            468899999999999999999998     5999999999843

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.8e-06  Score=57.55  Aligned_cols=36  Identities=11%  Similarity=0.017  Sum_probs=33.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFF   43 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff   43 (111)
                      +|..+|+++++||++||+.||.+|++     +.+|++|||.
T Consensus       234 ~~~~~s~~l~~li~~~L~~dp~~Rps-----~~ell~hp~i  269 (269)
T d2java1         234 IPYRYSDELNEIITRMLNLKDYHRPS-----VEEILENPLI  269 (269)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHTSTTC
T ss_pred             CCcccCHHHHHHHHHHcCCChhHCcC-----HHHHHhCCcC
Confidence            56789999999999999999999997     5999999994

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=5.6e-07  Score=62.58  Aligned_cols=36  Identities=14%  Similarity=0.290  Sum_probs=33.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+|+++++||++||++||.+|++     +.++++||||..
T Consensus       228 ~~~s~~~~~li~~~L~~dp~~R~s-----~~eil~hp~~~~  263 (321)
T d1tkia_         228 KEISIEAMDFVDRLLVKERKSRMT-----ASEALQHPWLKQ  263 (321)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCC-----HHHHHHSHHHHS
T ss_pred             cCCCHHHHHHHHHHccCChhHCcC-----HHHHhcCHhhcc
Confidence            368999999999999999999998     599999999974

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=2.3e-06  Score=59.71  Aligned_cols=35  Identities=17%  Similarity=0.266  Sum_probs=32.3

Q ss_pred             CCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           6 FVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         6 ~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      .+|+++++||++||++||.+|++     +.++++||||..
T Consensus       243 ~~s~~~~~li~~~L~~dP~~R~s-----~~eil~hp~~~~  277 (335)
T d2ozaa1         243 EVSEEVKMLIRNLLKTEPTQRMT-----ITEFMNHPWIMQ  277 (335)
T ss_dssp             HSCHHHHHHHHHHSCSSTTTSCC-----HHHHHHSHHHHT
T ss_pred             cCCHHHHHHHHHHccCChhHCcC-----HHHHHcCHHhhC
Confidence            48999999999999999999998     599999999963

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.84  E-value=3.1e-06  Score=58.53  Aligned_cols=36  Identities=22%  Similarity=0.123  Sum_probs=33.0

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCCC
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFRH   45 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~~   45 (111)
                      ..+|+++++||++||+.||.+|++     +.++++||||..
T Consensus       237 ~~~s~~~~~li~~~L~~dP~~Rpt-----~~ell~Hp~~~~  272 (309)
T d1u5ra_         237 GHWSEYFRNFVDSCLQKIPQDRPT-----SEVLLKHRFVLR  272 (309)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC-----HHHHTTCHHHHS
T ss_pred             CCCCHHHHHHHHHHCcCChhHCcC-----HHHHHhCHHhcC
Confidence            458999999999999999999998     599999999963

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00025  Score=48.04  Aligned_cols=39  Identities=21%  Similarity=0.154  Sum_probs=33.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc--CCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK--QAFFRH   45 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~--h~ff~~   45 (111)
                      .+|..+++++++||+++|+.||++|++     +++|..  |+||..
T Consensus       234 ~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~~i~~~L~~~~~~  274 (285)
T d1fmka3         234 PCPPECPESLHDLMCQCWRKEPEERPT-----FEYLQAFLEDYFTS  274 (285)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHHHHHTTTSC
T ss_pred             CCCcccCHHHHHHHHHHcccCHhHCcC-----HHHHHHHHhhhhcC
Confidence            467789999999999999999999997     588876  778864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00064  Score=46.57  Aligned_cols=34  Identities=9%  Similarity=0.002  Sum_probs=30.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|..+|+++++||++||+.+|++|++     +.+|.+|
T Consensus       287 ~~p~~~~~~l~~li~~cl~~dP~~RPt-----~~ei~~~  320 (325)
T d1rjba_         287 DQPFYATEEIYIIMQSCWAFDSRKRPS-----FPNLTSF  320 (325)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcC-----HHHHHHH
Confidence            467789999999999999999999998     5888765

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0002  Score=48.26  Aligned_cols=40  Identities=10%  Similarity=0.007  Sum_probs=32.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhh---hcCCCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDV---KKQAFFRHI   46 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i---~~h~ff~~i   46 (111)
                      .+|..+++++++||.++|..||.+|++.     .+|   ++|+|+..+
T Consensus       230 ~~p~~~~~~~~~li~~cl~~dp~~RPs~-----~~i~~~L~~~~~~~~  272 (277)
T d1xbba_         230 GCPAGCPREMYDLMNLCWTYDVENRPGF-----AAVELRLRNYYYDVV  272 (277)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCCH-----HHHHHHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCCHhHCcCH-----HHHHHHhhCHHhhcC
Confidence            4678899999999999999999999974     666   466665533

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00078  Score=44.89  Aligned_cols=34  Identities=15%  Similarity=0.025  Sum_probs=30.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .+|..+|+++++||.++|..||.+|++     +.+|++|
T Consensus       229 ~~~~~~~~~~~~li~~cl~~dp~~Rps-----~~ei~~~  262 (273)
T d1mp8a_         229 PMPPNCPPTLYSLMTKCWAYDPSRRPR-----FTELKAQ  262 (273)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHhHCcC-----HHHHHHH
Confidence            467889999999999999999999997     5888765

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00087  Score=45.13  Aligned_cols=34  Identities=6%  Similarity=0.096  Sum_probs=30.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .+|..+++++++||.++|+.||.+|++     +.+|.+|
T Consensus       257 ~~~~~~~~~l~~li~~cl~~dP~~Rpt-----~~eil~~  290 (299)
T d1ywna1         257 RAPDYTTPEMYQTMLDCWHGEPSQRPT-----FSELVEH  290 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhHCcC-----HHHHHHH
Confidence            457789999999999999999999998     5888776

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00065  Score=45.41  Aligned_cols=38  Identities=16%  Similarity=0.164  Sum_probs=32.3

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc--CCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK--QAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~--h~ff~   44 (111)
                      ..|..+++++++||+++|+.||++|++     +.+|.+  |+||.
T Consensus       230 ~~p~~~~~~l~~li~~cl~~~P~~Rpt-----~~ei~~~L~~~ft  269 (272)
T d1qpca_         230 VRPDNCPEELYQLMRLCWKERPEDRPT-----FDYLRSVLEDFFT  269 (272)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHHHHHHHH
T ss_pred             CCcccChHHHHHHHHHHcCCCHhHCcC-----HHHHHHHhhhhhh
Confidence            356789999999999999999999997     588876  66664

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0012  Score=44.73  Aligned_cols=34  Identities=9%  Similarity=0.095  Sum_probs=30.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      .+|..+++++++||+++|..||++|++     +.+|.+|
T Consensus       246 ~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~eil~~  279 (309)
T d1fvra_         246 EKPLNCDDEVYDLMRQCWREKPYERPS-----FAQILVS  279 (309)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCccCCHHHHHHHHHHcCCChhHCcC-----HHHHHHH
Confidence            457789999999999999999999998     5899876

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0014  Score=43.57  Aligned_cols=34  Identities=6%  Similarity=-0.063  Sum_probs=30.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|...++++++||+++|+.||.+|++     +.+|++|
T Consensus       221 ~~p~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~  254 (258)
T d1k2pa_         221 YRPHLASEKVYTIMYSCWHEKADERPT-----FKILLSN  254 (258)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCC-----HHHHHHH
T ss_pred             CCcccccHHHHHHHHHHccCCHhHCcC-----HHHHHHH
Confidence            457779999999999999999999997     5888876

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0013  Score=44.56  Aligned_cols=33  Identities=15%  Similarity=0.125  Sum_probs=28.7

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..|..+++.+++||.++|+.+|.+|++     +.+|.+
T Consensus       255 ~~p~~~~~~l~~li~~cl~~~P~~RPs-----~~~il~  287 (308)
T d1p4oa_         255 DKPDNCPDMLFELMRMCWQYNPKMRPS-----FLEIIS  287 (308)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCcccchHHHHHHHHHHcCCChhHCcC-----HHHHHH
Confidence            356789999999999999999999997     578764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0027  Score=42.19  Aligned_cols=33  Identities=12%  Similarity=-0.011  Sum_probs=28.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+|..+++++++||+++|..||.+|++.     .+|.+
T Consensus       220 ~~~~~~~~~~~~li~~cl~~dP~~Rps~-----~~l~~  252 (262)
T d1byga_         220 DAPDGCPPAVYEVMKNCWHLDAAMRPSF-----LQLRE  252 (262)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCH-----HHHHH
T ss_pred             CCCccCCHHHHHHHHHHcccCHhHCcCH-----HHHHH
Confidence            4677899999999999999999999984     66654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.81  E-value=0.0036  Score=41.54  Aligned_cols=31  Identities=23%  Similarity=0.179  Sum_probs=26.2

Q ss_pred             CCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           4 KRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         4 p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      +..+|+++++||++||++||.+|+.+    +++++
T Consensus       238 ~~~~s~~l~~li~~~L~~dp~~R~~s----a~~l~  268 (277)
T d1o6ya_         238 HEGLSADLDAVVLKALAKNPENRYQT----AAEMR  268 (277)
T ss_dssp             SSSCCHHHHHHHHHHTCSSGGGSCSS----HHHHH
T ss_pred             ccCCCHHHHHHHHHHccCCHhHCHhH----HHHHH
Confidence            35689999999999999999999965    56654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.76  E-value=0.0043  Score=41.62  Aligned_cols=33  Identities=15%  Similarity=0.129  Sum_probs=28.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+|..+++++++||+++|+.||.+|++     +.+|.+
T Consensus       236 ~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~ei~~  268 (287)
T d1opja_         236 ERPEGCPEKVYELMRACWQWNPSDRPS-----FAEIHQ  268 (287)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCccchHHHHHHHHHHcCCCHhHCcC-----HHHHHH
Confidence            467789999999999999999999997     477753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0046  Score=41.56  Aligned_cols=33  Identities=9%  Similarity=0.033  Sum_probs=28.8

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+|..+++++++||.++|+.||.+|++     +.+|.+
T Consensus       257 ~~p~~~~~~l~~li~~cl~~dP~~Rps-----~~eil~  289 (299)
T d1fgka_         257 DKPSNCTNELYMMMRDCWHAVPSQRPT-----FKQLVE  289 (299)
T ss_dssp             CCCSSCCHHHHHHHHHHTCSSGGGSCC-----HHHHHH
T ss_pred             CCCccchHHHHHHHHHHccCCHhHCcC-----HHHHHH
Confidence            467889999999999999999999997     477753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0039  Score=41.22  Aligned_cols=34  Identities=15%  Similarity=0.168  Sum_probs=29.5

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|...++++.+||.++|+.||.+|++     +++|.+|
T Consensus       222 ~~p~~~~~~l~~li~~cl~~~p~~Rps-----~~~il~~  255 (263)
T d1sm2a_         222 YKPRLASTHVYQIMNHCWKERPEDRPA-----FSRLLRQ  255 (263)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCccccCHHHHHHHHHHccCCHhHCcC-----HHHHHHH
Confidence            356778999999999999999999997     5888765

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.0043  Score=42.06  Aligned_cols=34  Identities=3%  Similarity=-0.152  Sum_probs=30.4

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|..+++++++||.++|..+|.+|++     +.+|..|
T Consensus       233 ~~p~~~~~~~~~li~~cl~~dP~~RPs-----~~eil~~  266 (317)
T d1xkka_         233 PQPPICTIDVYMIMVKCWMIDADSRPK-----FRELIIE  266 (317)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCCcccCHHHHHHHHHhCCCChhhCcC-----HHHHHHH
Confidence            457789999999999999999999998     5888877

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.0063  Score=41.27  Aligned_cols=34  Identities=9%  Similarity=0.025  Sum_probs=30.0

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ..|..+++++++||.++|..+|++|++     +.||.+|
T Consensus       254 ~~p~~~~~~l~~li~~cl~~dP~~RPs-----~~ei~~~  287 (311)
T d1r0pa_         254 LQPEYCPDPLYEVMLKCWHPKAEMRPS-----FSELVSR  287 (311)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             CCcccCcHHHHHHHHHHcCCCHhHCcC-----HHHHHHH
Confidence            356778999999999999999999998     5888876

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0086  Score=40.39  Aligned_cols=32  Identities=9%  Similarity=0.013  Sum_probs=27.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      ..|..++.++++||.++|..||.+|++     +.+|.
T Consensus       268 ~~~~~~~~~l~~Li~~cl~~dP~~RPs-----~~~il  299 (311)
T d1t46a_         268 LSPEHAPAEMYDIMKTCWDADPLKRPT-----FKQIV  299 (311)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCcccccHHHHHHHHHHcCCChhHCcC-----HHHHH
Confidence            356779999999999999999999997     47765

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.0092  Score=39.95  Aligned_cols=38  Identities=8%  Similarity=-0.088  Sum_probs=31.1

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhh---hcCCCCC
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDV---KKQAFFR   44 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i---~~h~ff~   44 (111)
                      .+|..+++++.+||.++|..+|++|++.     .+|   ++|.|+.
T Consensus       232 ~~p~~~~~~l~~li~~cl~~~p~~RPs~-----~~i~~~L~~~~~~  272 (285)
T d1u59a_         232 ECPPECPPELYALMSDCWIYKWEDRPDF-----LTVEQRMRACYYS  272 (285)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCH-----HHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCCHhHCcCH-----HHHHHHHHHHHHH
Confidence            4678899999999999999999999974     555   5666653

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.011  Score=39.24  Aligned_cols=31  Identities=10%  Similarity=-0.036  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .|..++.++++||.++|..||.+|++     +.+|.
T Consensus       236 ~~~~~~~~l~~li~~cl~~dp~~RPt-----~~ei~  266 (273)
T d1u46a_         236 RPEDCPQDIYNVMVQCWAHKPEDRPT-----FVALR  266 (273)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CcccccHHHHHHHHHHcCCChhHCcC-----HHHHH
Confidence            45779999999999999999999997     47775

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.0088  Score=39.84  Aligned_cols=33  Identities=12%  Similarity=-0.005  Sum_probs=28.3

Q ss_pred             CCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcC
Q psy3349           3 DKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQ   40 (111)
Q Consensus         3 ~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h   40 (111)
                      ++..+++++++||.++|..+|.+|++     +.+|.+|
T Consensus       234 ~~~~~~~~l~~li~~cl~~dp~~RPt-----~~~il~~  266 (276)
T d1uwha_         234 VRSNCPKAMKRLMAECLKKKRDERPL-----FPQILAS  266 (276)
T ss_dssp             SCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHHHH
T ss_pred             ccccchHHHHHHHHHHcCCCHhHCcC-----HHHHHHH
Confidence            35568999999999999999999997     5888754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.63  E-value=0.015  Score=38.86  Aligned_cols=32  Identities=9%  Similarity=-0.133  Sum_probs=27.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhh
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVK   38 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~   38 (111)
                      .+|..+++++.+||.++|+.+|++|++     +.+|.
T Consensus       262 ~~p~~~~~~~~~li~~cl~~~P~~RPt-----~~ev~  293 (301)
T d1lufa_         262 ACPENCPLELYNLMRLCWSKLPADRPS-----FCSIH  293 (301)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCC-----HHHHH
T ss_pred             CCCccchHHHHHHHHHHcCCChhHCcC-----HHHHH
Confidence            357789999999999999999999997     47774

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.59  E-value=0.013  Score=39.42  Aligned_cols=33  Identities=6%  Similarity=-0.099  Sum_probs=27.9

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..|..+++++++||.++|..||.+|++     +.+|.+
T Consensus       253 ~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~ei~~  285 (299)
T d1jpaa_         253 PPPMDCPSALHQLMLDCWQKDRNHRPK-----FGQIVN  285 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCC-----HHHHHH
T ss_pred             CCCccchHHHHHHHHHHcCCCHhHCcC-----HHHHHH
Confidence            356679999999999999999999997     477653

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.40  E-value=0.0024  Score=42.78  Aligned_cols=46  Identities=9%  Similarity=-0.021  Sum_probs=32.8

Q ss_pred             CCCCHHHHHHHHHhhccCcccccCCCCCChHhhhcCCCCC-------CCChhHHh
Q psy3349           5 RFVGEVGLERWKELLRKNPERRLGSSERDAEDVKKQAFFR-------HIQWEELL   52 (111)
Q Consensus         5 ~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~h~ff~-------~i~w~~l~   52 (111)
                      ..+++++.+||.++|..+|.+|+..  .-+.++++|+|.+       .+||+.+.
T Consensus       242 ~~~p~~~~~li~~cl~~~p~~RP~~--~~i~~~l~~~~~~~~~~~~~~~Dw~~~~  294 (299)
T d1ckia_         242 KGYPSEFATYLNFCRSLRFDDKPDY--SYLRQLFRNLFHRQGFSYDYVFDWNMLK  294 (299)
T ss_dssp             TTSCHHHHHHHHHHHHSCTTCCCCH--HHHHHHHHHHHHHHTCCCSCCCHHHHGG
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCH--HHHHHHHHHHHHHcCCCCCCCcCchhhc
Confidence            4689999999999999999999874  1123555665532       25776653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.027  Score=37.33  Aligned_cols=33  Identities=9%  Similarity=-0.036  Sum_probs=28.2

Q ss_pred             CCCCCCCHHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           2 DDKRFVGEVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         2 ~~p~~~s~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      ..|..++.++++||.++|..+|.+|++     +.+|.+
T Consensus       233 ~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~eil~  265 (283)
T d1mqba_         233 PTPMDCPSAIYQLMMQCWQQERARRPK-----FADIVS  265 (283)
T ss_dssp             CCCTTCBHHHHHHHHHHTCSSTTTSCC-----HHHHHH
T ss_pred             CCchhhHHHHHHHHHHHCcCCHhHCcC-----HHHHHH
Confidence            456779999999999999999999997     477753

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.15  E-value=0.28  Score=32.51  Aligned_cols=26  Identities=31%  Similarity=0.217  Sum_probs=22.1

Q ss_pred             HHHHHHHHHhhccCcccccCCCCCChHhhhc
Q psy3349           9 EVGLERWKELLRKNPERRLGSSERDAEDVKK   39 (111)
Q Consensus         9 ~~a~dli~~LL~~~p~~Rlg~~~~g~~~i~~   39 (111)
                      .+..+|+.++|+.||++|++     +.+|.+
T Consensus       265 ~~l~~li~~cl~~dp~~Rps-----~~ei~~  290 (303)
T d1vjya_         265 RVMAKIMRECWYANGAARLT-----ALRIKK  290 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCC-----HHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcC-----HHHHHH
Confidence            45889999999999999998     477764