Psyllid ID: psy3380

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
MMCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQYFEYDYKY
ccEEEcccccHHHHHHHHHHcccEEEEEEEEEEcccccEEEccccccccccccEEEEEEcEEEEEEEEccHHHHHHcccccccccccccccEEEEEEHHHHHHHccccccccccccEEEEEEEEEEEEEEcEEEEEEcccccccccccccccccccHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHcccccccccEEEEccccccccccccccccccccEEEEccccccccEEEEEcccccccccccccccccccEEEEccccccccccEEEcccc
ccccccccccHHHHHHHHHHcccEEEEEEEEEEcccccEEccccccccccccccEcccccEEEEEEccccHHHHHHccccccccccccccccHHHEcHHHHHHHccccccccEEccccEEEEEEEEEEcccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccHEEEEcccccccccccccccccccccEEEEEccccccccEEEEEEccccEcccccccccccccEEEEEcccccccEEEEEcccc
MMCCEVQKRWLQPLLDVLARnsshvvsplianicddtfelrfppgrltssyKFFIGGfdwnlqfnwhaipererkrhknaaepvwtptmagglfsIDKAFFEKlgtydsgfdiwggenlelSFKFNwhaipererkrhknaaepvwtptmagglfsIDKAFFEKlgtydsgfdiwggenlelsfkgdfgdvtsRKELRRNLGCKSFKWYLEVsndwsgmcidsackptdmhkpvglypchkqggnqfwmmskhgeirrdeacldyaggdvilypchgskgnqyfeydyky
MMCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERErkrhknaaepvwtptmaggLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKelrrnlgcksfKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVIlypchgskgnqyfeydyky
MMCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQYFEYDYKY
**CCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPE********AAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPE********AAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQYFEYDY**
*MCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIP*************VWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQY*EYD***
MMCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQYFEYDYKY
*MCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQYFEYD***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLEVSNDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQYFEYDYKY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query290 2.2.26 [Sep-21-2011]
Q8MRC9650 Putative polypeptide N-ac yes N/A 0.879 0.392 0.463 3e-71
Q95ZJ1626 Polypeptide N-acetylgalac yes N/A 0.886 0.410 0.448 9e-69
Q6UE39556 Polypeptide N-acetylgalac yes N/A 0.924 0.482 0.378 5e-47
Q8CF93556 Polypeptide N-acetylgalac yes N/A 0.924 0.482 0.378 6e-47
Q8IUC8556 Polypeptide N-acetylgalac yes N/A 0.924 0.482 0.378 6e-47
O08912559 Polypeptide N-acetylgalac no N/A 0.924 0.479 0.375 2e-46
Q10473559 Polypeptide N-acetylgalac no N/A 0.924 0.479 0.372 2e-45
Q10472559 Polypeptide N-acetylgalac no N/A 0.924 0.479 0.372 2e-45
Q07537559 Polypeptide N-acetylgalac no N/A 0.924 0.479 0.369 3e-45
Q29121559 Polypeptide N-acetylgalac yes N/A 0.924 0.479 0.369 3e-45
>sp|Q8MRC9|GALT9_DROME Putative polypeptide N-acetylgalactosaminyltransferase 9 OS=Drosophila melanogaster GN=pgant9 PE=2 SV=2 Back     alignment and function desciption
 Score =  268 bits (685), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/326 (46%), Positives = 188/326 (57%), Gaps = 71/326 (21%)

Query: 4   CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
           CE  + WL+PLLD +ARNS+ VV P+I  I D+T E  +       S    +GGFDWNLQ
Sbjct: 304 CECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHY-----RDSGGVNVGGFDWNLQ 358

Query: 64  FNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSF 123
           F+WH +PERERKRH + AEPV++PTMAGGLFSID+ FF++LGTYDSGFDIWGGENLELSF
Sbjct: 359 FSWHPVPERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSF 418

Query: 124 KFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKA-----FFEKLGTYD--SGFDIWG 176
           K                     W   M GG   I         F K   Y   SG ++  
Sbjct: 419 K--------------------TW---MCGGTLEIVPCSHVGHIFRKRSPYKWRSGVNVLK 455

Query: 177 GENLELSF-----------------KGDFGDVTSRKELRRNLGCKSFKWYL--------- 210
             ++ L+                  KGD+GDV+ R++LR +L CKSFKWYL         
Sbjct: 456 KNSVRLAEVWMDEYSQYYYHRIGNDKGDWGDVSDRRKLRNDLKCKSFKWYLDNIYPELFI 515

Query: 211 --------EVSNDWSG--MCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDE 260
                   E+ N   G   C+D+        K VG YPCH+QGGNQ+WM+SK GEIRRD+
Sbjct: 516 PGDSVAHGEIRNLGYGGRTCLDAPAGKKHQKKAVGTYPCHRQGGNQYWMLSKAGEIRRDD 575

Query: 261 ACLDYAGGDVILYPCHGSKGNQYFEY 286
           +CLDYAG DV L+ CHG KGNQ++ Y
Sbjct: 576 SCLDYAGKDVTLFGCHGGKGNQFWTY 601
May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 4EC: 1
>sp|Q95ZJ1|GALT5_CAEEL Polypeptide N-acetylgalactosaminyltransferase 5 OS=Caenorhabditis elegans GN=gly-5 PE=2 SV=2 Back     alignment and function description
>sp|Q6UE39|GLT13_RAT Polypeptide N-acetylgalactosaminyltransferase 13 OS=Rattus norvegicus GN=Galnt13 PE=2 SV=1 Back     alignment and function description
>sp|Q8CF93|GLT13_MOUSE Polypeptide N-acetylgalactosaminyltransferase 13 OS=Mus musculus GN=Galnt13 PE=2 SV=1 Back     alignment and function description
>sp|Q8IUC8|GLT13_HUMAN Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens GN=GALNT13 PE=2 SV=2 Back     alignment and function description
>sp|O08912|GALT1_MOUSE Polypeptide N-acetylgalactosaminyltransferase 1 OS=Mus musculus GN=Galnt1 PE=1 SV=1 Back     alignment and function description
>sp|Q10473|GALT1_RAT Polypeptide N-acetylgalactosaminyltransferase 1 OS=Rattus norvegicus GN=Galnt1 PE=1 SV=1 Back     alignment and function description
>sp|Q10472|GALT1_HUMAN Polypeptide N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=GALNT1 PE=1 SV=1 Back     alignment and function description
>sp|Q07537|GALT1_BOVIN Polypeptide N-acetylgalactosaminyltransferase 1 OS=Bos taurus GN=GALNT1 PE=1 SV=1 Back     alignment and function description
>sp|Q29121|GALT1_PIG Polypeptide N-acetylgalactosaminyltransferase 1 OS=Sus scrofa GN=GALNT1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
242008519 657 UDP-GalNAc:polypeptide N-acetylgalactosa 0.882 0.389 0.477 7e-80
350426661 602 PREDICTED: putative polypeptide N-acetyl 0.889 0.428 0.501 2e-78
91089275 586 PREDICTED: similar to n-acetylgalactosam 0.879 0.435 0.503 2e-78
340723540 602 PREDICTED: putative polypeptide N-acetyl 0.889 0.428 0.501 2e-78
345484986 610 PREDICTED: putative polypeptide N-acetyl 0.889 0.422 0.498 4e-78
427779849 683 Putative polypeptide n-acetylgalactosami 0.882 0.374 0.510 1e-77
427789023 648 Putative polypeptide n-acetylgalactosami 0.882 0.395 0.510 2e-77
328785249 635 PREDICTED: putative polypeptide N-acetyl 0.882 0.403 0.472 4e-77
340723544 637 PREDICTED: putative polypeptide N-acetyl 0.889 0.405 0.467 4e-77
350426664 637 PREDICTED: putative polypeptide N-acetyl 0.889 0.405 0.467 4e-77
>gi|242008519|ref|XP_002425051.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis] gi|212508700|gb|EEB12313.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  303 bits (776), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 173/362 (47%), Positives = 202/362 (55%), Gaps = 106/362 (29%)

Query: 4   CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
           CE    WL+PLLD +A++ + VV P+I  I D T E  F       S    +GGFDWNLQ
Sbjct: 276 CECTVGWLEPLLDRIAKDPTTVVCPVIDVIDDTTLEYNF-----RDSGGVNVGGFDWNLQ 330

Query: 64  FNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSF 123
           FNWHA+PERE+KRHKN AEPVW+PTMAGGLF+IDK FFE++GTYDSGFDIWGGENLELSF
Sbjct: 331 FNWHAVPEREKKRHKNTAEPVWSPTMAGGLFAIDKNFFERIGTYDSGFDIWGGENLELSF 390

Query: 124 KFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKA-----FFEKLGTYD--SGFDIWG 176
           K                     W   M GG   I         F +   Y   SG ++  
Sbjct: 391 K--------------------TW---MCGGTLEIVPCSHVGHIFRRRSPYKWRSGVNVLK 427

Query: 177 GENLELSF-----------------KGDFGDVTSRKELRRNLGCKSFKWYL--------- 210
             ++ L+                  KGDFGDV++RKELR+ L CKSFKWYL         
Sbjct: 428 RNSVRLAEVWLDDYAKYYYQRIGDDKGDFGDVSARKELRKRLNCKSFKWYLDNIYPELFI 487

Query: 211 --------EVSN-------------------------------------DWSGMCIDSAC 225
                   EV N                                     +WSG C+DS C
Sbjct: 488 PGEAVAGGEVRNKGLGGKTCLDSPARKADLHKAVGLFPCHRQGGNQVSNNWSGQCLDSPC 547

Query: 226 KPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYAGGDVILYPCHGSKGNQYFE 285
           K  DMHKPVGL+PCHKQGGNQ+WM+SK GEIRRDEACLDYAG DVILYPCHGSKGNQY+ 
Sbjct: 548 KSEDMHKPVGLWPCHKQGGNQYWMLSKAGEIRRDEACLDYAGQDVILYPCHGSKGNQYWH 607

Query: 286 YD 287
           Y+
Sbjct: 608 YN 609

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350426661|ref|XP_003494505.1| PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|91089275|ref|XP_970398.1| PREDICTED: similar to n-acetylgalactosaminyltransferase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|340723540|ref|XP_003400147.1| PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like isoform 1 [Bombus terrestris] gi|340723542|ref|XP_003400148.1| PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|345484986|ref|XP_003425168.1| PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|427779849|gb|JAA55376.1| Putative polypeptide n-acetylgalactosaminyltransferase [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|427789023|gb|JAA59963.1| Putative polypeptide n-acetylgalactosaminyltransferase [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|328785249|ref|XP_393950.3| PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like [Apis mellifera] Back     alignment and taxonomy information
>gi|340723544|ref|XP_003400149.1| PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like isoform 3 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350426664|ref|XP_003494506.1| PREDICTED: putative polypeptide N-acetylgalactosaminyltransferase 9-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query290
FB|FBgn0050463650 CG30463 [Drosophila melanogast 0.406 0.181 0.637 3.2e-73
WB|WBGene00001630626 gly-5 [Caenorhabditis elegans 0.406 0.188 0.596 1.1e-70
UNIPROTKB|Q08DM9556 GALNT13 "Uncharacterized prote 0.668 0.348 0.420 1e-53
UNIPROTKB|J9NYT5556 GALNT13 "Uncharacterized prote 0.668 0.348 0.420 1e-53
UNIPROTKB|Q8IUC8556 GALNT13 "Polypeptide N-acetylg 0.668 0.348 0.420 1e-53
MGI|MGI:2139447556 Galnt13 "UDP-N-acetyl-alpha-D- 0.668 0.348 0.420 1e-53
RGD|735044556 Galnt13 "UDP-N-acetyl-alpha-D- 0.668 0.348 0.420 1e-53
UNIPROTKB|F1PK73561 GALNT13 "Uncharacterized prote 0.668 0.345 0.420 1.2e-53
UNIPROTKB|Q08ER7561 GALNT13 "Polypeptide N-acetylg 0.668 0.345 0.420 1.2e-53
ZFIN|ZDB-GENE-091204-444556 galnt13 "UDP-N-acetyl-alpha-D- 0.668 0.348 0.406 2.3e-53
FB|FBgn0050463 CG30463 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 422 (153.6 bits), Expect = 3.2e-73, Sum P(3) = 3.2e-73
 Identities = 79/124 (63%), Positives = 95/124 (76%)

Query:     4 CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
             CE  + WL+PLLD +ARNS+ VV P+I  I D+T E  +       S    +GGFDWNLQ
Sbjct:   304 CECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHY-----RDSGGVNVGGFDWNLQ 358

Query:    64 FNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSF 123
             F+WH +PERERKRH + AEPV++PTMAGGLFSID+ FF++LGTYDSGFDIWGGENLELSF
Sbjct:   359 FSWHPVPERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSF 418

Query:   124 KFNW 127
             K  W
Sbjct:   419 K-TW 421
GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=ISS
WB|WBGene00001630 gly-5 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q08DM9 GALNT13 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9NYT5 GALNT13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IUC8 GALNT13 "Polypeptide N-acetylgalactosaminyltransferase 13" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2139447 Galnt13 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|735044 Galnt13 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PK73 GALNT13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q08ER7 GALNT13 "Polypeptide N-acetylgalactosaminyltransferase 13" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-091204-444 galnt13 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
cd02510299 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo 3e-53
pfam00652124 pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil 1e-16
cd00161124 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydr 8e-15
smart00458118 smart00458, RICIN, Ricin-type beta-trefoil 4e-13
pfam00652124 pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil 1e-07
cd00161124 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydr 2e-06
smart00458118 smart00458, RICIN, Ricin-type beta-trefoil 2e-05
>gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information 
 Score =  175 bits (445), Expect = 3e-53
 Identities = 91/234 (38%), Positives = 114/234 (48%), Gaps = 57/234 (24%)

Query: 4   CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
           CEV   WL+PLL  +A N   VV P+I  I  DTFE R        S     GGFDW+L 
Sbjct: 94  CEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYR-------GSSGDARGGFDWSLH 146

Query: 64  FNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSF 123
           F W  +PE ER R ++   P+ +PTMAGGLF+ID+ +F +LG YD G DIWGGENLELSF
Sbjct: 147 FKWLPLPEEER-RRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSF 205

Query: 124 KFNWHAIPERERKRHKNAAEPVWTPTMAGG------------LFSIDKAFFEKLGTYDS- 170
           K                    VW     GG            +F   +  +   G   + 
Sbjct: 206 K--------------------VW---QCGGSIEIVPCSRVGHIFRRKRKPYTFPGGSGTV 242

Query: 171 ------GFDIWGGENLELSFKG-------DFGDVTSRKELRRNLGCKSFKWYLE 211
                   ++W  E  E  +K        D+GD++ RK LR  L CKSFKWYLE
Sbjct: 243 LRNYKRVAEVWMDEYKEYFYKARPELRNIDYGDLSERKALRERLKCKSFKWYLE 296

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299
>gnl|CDD|216044 pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain Back     alignment and domain information
>gnl|CDD|238092 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication Back     alignment and domain information
>gnl|CDD|214672 smart00458, RICIN, Ricin-type beta-trefoil Back     alignment and domain information
>gnl|CDD|216044 pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain Back     alignment and domain information
>gnl|CDD|238092 cd00161, RICIN, Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication Back     alignment and domain information
>gnl|CDD|214672 smart00458, RICIN, Ricin-type beta-trefoil Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 290
KOG3736|consensus578 100.0
KOG3738|consensus559 100.0
KOG3737|consensus603 100.0
KOG3736|consensus578 100.0
KOG3738|consensus559 100.0
KOG3737|consensus603 100.0
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.91
cd00161124 RICIN Ricin-type beta-trefoil; Carbohydrate-bindin 98.83
PF00652124 Ricin_B_lectin: Ricin-type beta-trefoil lectin dom 98.79
smart00458117 RICIN Ricin-type beta-trefoil. Carbohydrate-bindin 98.77
cd00161124 RICIN Ricin-type beta-trefoil; Carbohydrate-bindin 98.45
PF00652124 Ricin_B_lectin: Ricin-type beta-trefoil lectin dom 98.44
PF14200105 RicinB_lectin_2: Ricin-type beta-trefoil lectin do 98.35
smart00458117 RICIN Ricin-type beta-trefoil. Carbohydrate-bindin 98.34
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 98.31
PF0270978 Glyco_transf_7C: N-terminal domain of galactosyltr 98.1
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 97.48
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 97.2
COG1216305 Predicted glycosyltransferases [General function p 96.62
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 96.43
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 95.47
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 95.15
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 94.78
PF14200105 RicinB_lectin_2: Ricin-type beta-trefoil lectin do 94.71
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 94.49
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 94.15
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 93.95
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 93.84
PF0270978 Glyco_transf_7C: N-terminal domain of galactosyltr 92.54
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 90.86
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 90.23
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 90.07
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 89.98
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 89.4
cd06442224 DPM1_like DPM1_like represents putative enzymes si 87.49
COG4092346 Predicted glycosyltransferase involved in capsule 87.33
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 87.08
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 86.66
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 86.5
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 86.3
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 83.99
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 80.49
>KOG3736|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.1e-71  Score=539.97  Aligned_cols=256  Identities=47%  Similarity=0.880  Sum_probs=231.8

Q ss_pred             ceecccCCchHHHHHHHhcCCCeEEEeeEeeecCCCcccccCCCccCCCCCceEEEEeeeeeeEEeeCCHHHHhcccCCC
Q psy3380           2 MCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHKNAA   81 (290)
Q Consensus         2 ~h~e~~~~Wl~pll~~i~~~~~~~v~p~I~~id~~t~~y~~~~~~~~~~~~~~~g~fdw~l~~~w~~~~~~~~~~~~~~~   81 (290)
                      |||||+.|||||||++|++++++||||+||+||++||+|...       +...+|+|||.|.|+|+.+|++++.++..++
T Consensus       235 sHcE~n~gWLePLL~~I~~~r~tvv~PvID~Id~~tf~y~~~-------~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~t  307 (578)
T KOG3736|consen  235 SHCEVNVGWLEPLLARIAEDRKTVVCPVIDVIDDNTFEYEKQ-------SELMRGGFDWELTFKWERLPLPEEKRRELPT  307 (578)
T ss_pred             cceeEecCcchHHHHHhhhcCceeecceEEeecCcCceeccc-------CccceeeeecceeEEeccCCccHhhcccCCC
Confidence            899999999999999999999999999999999999999863       4567899999999999999999998889999


Q ss_pred             CcccCccccCceeeechhhHhhhcccCCCCcccCcccccccccccceecCHHHHhccCCCCCccccCCCCCeEEEEEe--
Q psy3380          82 EPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDK--  159 (290)
Q Consensus        82 ~p~~sP~~~ggl~~I~~~~F~~~g~yd~~~~~~Gg~~~elsfk~~W~~~p~~~~~~~~~~~~p~~~p~~~GG~~~i~~--  159 (290)
                      +|++||+||||||||||++|+++|+||+||++|||||+|||||+ |                      ||||.++|.|  
T Consensus       308 ~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrv-W----------------------qCGG~lei~PCS  364 (578)
T KOG3736|consen  308 DPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRV-W----------------------QCGGRLEIVPCS  364 (578)
T ss_pred             CCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEE-e----------------------ccCCeEEecCcc
Confidence            99999999999999999999999999999999999999999999 9                      9999999999  


Q ss_pred             ---eeecccCCCCC--CCcccccccccc------------------ccCCCCCChhhHHHHHHHhccccchhheecc---
Q psy3380         160 ---AFFEKLGTYDS--GFDIWGGENLEL------------------SFKGDFGDVTSRKELRRNLGCKSFKWYLEVS---  213 (290)
Q Consensus       160 ---~~F~~~g~y~~--g~~~~~~e~~e~------------------~~~~~~Gdv~~r~~lR~~l~ck~FkWyl~nv---  213 (290)
                         |+||+.-||..  +.++..+|++|+                  ..+.++|||++|++||++|+||+|+|||+||   
T Consensus       365 rVGHifRk~~pY~~p~~~~~~~~N~~RlAeVWmDeyK~~~y~~~P~~~~~d~GDvseR~~LR~~L~CKsFkWyL~nVyPe  444 (578)
T KOG3736|consen  365 RVGHIFRKRKPYTFPDGTDTATRNLKRLAEVWMDEYKEQFYKRMPGLRNIDEGDLTERKALRERLNCKSFKWYLENVYPE  444 (578)
T ss_pred             ceeeeeecCCCccCCCcchhhhhchhhhhhhhhHHHHHHHHhhCccccccCCCCchhHHHHHHhcCCccccchHhhcCcc
Confidence               99999999943  346667777776                  3357999999999999999999999999998   


Q ss_pred             ---------------cCCCCceeccCCCCCCCCCCeEEEcCCCCCCcceeEEccccccccCCceeee-eCCeEEEEeCCC
Q psy3380         214 ---------------NDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDY-AGGDVILYPCHG  277 (290)
Q Consensus       214 ---------------~~~~~~CLD~~~~~~~~g~~v~l~~Ch~~~~nQ~w~lt~~G~Ir~~~~CLD~-~g~~V~l~~C~g  277 (290)
                                     +..++.|+|........+.++++++||+.+.||.|.+|+.|+||..+.|||+ ..+.|+|..||.
T Consensus       445 l~~~~~~~~~~G~i~~~~~~~cld~~~~~~~~~~~~~~~~Ch~~~~~Q~~~yT~~~eir~~~~cl~~~~~~~v~l~~C~~  524 (578)
T KOG3736|consen  445 LYLPTPHVYASGEIRNGNPNLCLDTERAPAGQGMAVGLYPCHGPGGNQYFPYTKQGEIRIGDLCLDVDDAGKVTLYDCHK  524 (578)
T ss_pred             ccCCCCcccccceeccCCcchhhhhhchhccCCCcceEecCCCccccccccccCCcceEECCEEeccccCCceEEEeccc
Confidence                           2446789998775444467899999999999999999999999999999998 333499999999


Q ss_pred             CCCceeEEEcc
Q psy3380         278 SKGNQYFEYDY  288 (290)
Q Consensus       278 ~~~nQ~W~~~~  288 (290)
                      .+ ||.|.|+.
T Consensus       525 ~~-~q~w~~~~  534 (578)
T KOG3736|consen  525 MG-NQLWHYDK  534 (578)
T ss_pred             cc-ccceEEcC
Confidence            87 99999875

>KOG3738|consensus Back     alignment and domain information
>KOG3737|consensus Back     alignment and domain information
>KOG3736|consensus Back     alignment and domain information
>KOG3738|consensus Back     alignment and domain information
>KOG3737|consensus Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication Back     alignment and domain information
>PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis Back     alignment and domain information
>smart00458 RICIN Ricin-type beta-trefoil Back     alignment and domain information
>cd00161 RICIN Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication Back     alignment and domain information
>PF00652 Ricin_B_lectin: Ricin-type beta-trefoil lectin domain; InterPro: IPR000772 Ricin is a legume lectin from the seeds of the castor bean plant, Ricinus communis Back     alignment and domain information
>PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A Back     alignment and domain information
>smart00458 RICIN Ricin-type beta-trefoil Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
1xhb_A472 The Crystal Structure Of Udp-Galnac: Polypeptide Al 2e-47
2ffu_A501 Crystal Structure Of Human Ppgalnact-2 Complexed Wi 2e-37
2d7i_A570 Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac 3e-26
>pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N- Acetylgalactosaminyltransferase-T1 Length = 472 Back     alignment and structure 
Iteration: 1

 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 159/314 (50%), Gaps = 46/314 (14%)
Query: 4   CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
           CE    WL+PLL  +  +   VV P+I  I DDTFE         +      GGF+W L 
Sbjct: 125 CECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEY-------MAGSDMTYGGFNWKLN 177
Query: 64  FNWHAIPERERKRHK-NAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELS 122
           F W+ +P+RE  R K +   PV TPTMAGGLFSID+ +F+++GTYD+G DIWGGENLE+S
Sbjct: 178 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEIS 237
Query: 123 FKFNWH--AIPERERKRHKNAAEPVWTP-TMAGGLFSIDKAFFEKLGTYDSGFDIWGGEN 179
           F+  W      E     H        TP T  GG   I      +L       ++W  E 
Sbjct: 238 FRI-WQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLA------EVWMDEF 290
Query: 180 LELSF-------KGDFGDVTSRKELRRNLGCKSFKWYL-----------------EVSND 215
               +       K D+GD++SR  LRR L CK F WYL                 E+ N 
Sbjct: 291 KNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNV 350
Query: 216 WSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYA--GGDVILY 273
            +  C+D+  +  +  + VG++ CH  GGNQ +  + + EIR D+ CLD +   G V + 
Sbjct: 351 ETNQCLDNMARKEN--EKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLDVSKLNGPVTML 408
Query: 274 PCHGSKGNQYFEYD 287
            CH  KGNQ +EYD
Sbjct: 409 KCHHLKGNQLWEYD 422
>pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp And Ea2 Length = 501 Back     alignment and structure
>pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ Length = 570 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query290
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 4e-69
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 2e-67
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 3e-04
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 1e-55
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 8e-07
3a07_A118 Actinohivin; carbohydrate-binding module family 13 1e-12
3a07_A118 Actinohivin; carbohydrate-binding module family 13 9e-09
1ggp_B 254 TKL-1, protein (lectin 1 B chain); sugar binding p 4e-12
1ggp_B254 TKL-1, protein (lectin 1 B chain); sugar binding p 1e-04
1ggp_B254 TKL-1, protein (lectin 1 B chain); sugar binding p 2e-04
2aai_B 262 Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG 6e-12
2aai_B262 Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG 7e-08
2aai_B262 Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG 9e-08
2aai_B262 Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG 6e-06
1abr_B 267 Abrin-A; glycosidase/carbohydrate complex, lectin, 6e-11
1abr_B267 Abrin-A; glycosidase/carbohydrate complex, lectin, 3e-05
1abr_B267 Abrin-A; glycosidase/carbohydrate complex, lectin, 1e-04
2ao3_A130 29-kDa galactose-binding lectin; earthworm lumbric 7e-11
2ao3_A130 29-kDa galactose-binding lectin; earthworm lumbric 3e-05
1knl_A130 Endo-1,4-beta-xylanase A; carbohydrate binding mod 8e-11
1knl_A130 Endo-1,4-beta-xylanase A; carbohydrate binding mod 6e-04
1m2t_B 263 Mistletoe lectin I B chain; ribosome inactivation, 2e-10
1m2t_B263 Mistletoe lectin I B chain; ribosome inactivation, 1e-05
1m2t_B263 Mistletoe lectin I B chain; ribosome inactivation, 2e-04
1m2t_B263 Mistletoe lectin I B chain; ribosome inactivation, 5e-04
1vcl_A 432 Hemolytic lectin CEL-III; hemolysis, hemagglutinat 5e-10
1vcl_A 432 Hemolytic lectin CEL-III; hemolysis, hemagglutinat 5e-09
1vcl_A 432 Hemolytic lectin CEL-III; hemolysis, hemagglutinat 4e-05
3c9z_A 258 Agglutinin II, SNA-II; beta-trefoil, ricin-B domai 6e-09
3c9z_A258 Agglutinin II, SNA-II; beta-trefoil, ricin-B domai 4e-06
3c9z_A258 Agglutinin II, SNA-II; beta-trefoil, ricin-B domai 3e-04
2vlc_A 570 Cinnamomin, type 2 ribosome-inactivating protein c 2e-08
2vlc_A570 Cinnamomin, type 2 ribosome-inactivating protein c 5e-06
2vlc_A570 Cinnamomin, type 2 ribosome-inactivating protein c 8e-06
2vlc_A570 Cinnamomin, type 2 ribosome-inactivating protein c 1e-05
3a21_A614 Putative secreted alpha-galactosidase; beta-alpha- 3e-04
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472 Back     alignment and structure
 Score =  220 bits (562), Expect = 4e-69
 Identities = 112/312 (35%), Positives = 155/312 (49%), Gaps = 38/312 (12%)

Query: 4   CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
           CE    WL+PLL  +  +   VV P+I  I DDTFE         +      GGF+W L 
Sbjct: 125 CECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYM-------AGSDMTYGGFNWKLN 177

Query: 64  FNWHAIPERERKRHK-NAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELS 122
           F W+ +P+RE  R K +   PV TPTMAGGLFSID+ +F+++GTYD+G DIWGGENLE+S
Sbjct: 178 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEIS 237

Query: 123 FKFNWHA------IPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWG 176
           F+  W        +           A P   P   G + + +     +   +   F  + 
Sbjct: 238 FRI-WQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAE--VWMDEFKNFF 294

Query: 177 GENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLE-----------------VSNDWSGM 219
                   K D+GD++SR  LRR L CK F WYLE                 + N  +  
Sbjct: 295 YIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQ 354

Query: 220 CIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYA--GGDVILYPCHG 277
           C+D+       ++ VG++ CH  GGNQ +  + + EIR D+ CLD +   G V +  CH 
Sbjct: 355 CLDN--MARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHH 412

Query: 278 SKGNQYFEYDYK 289
            KGNQ +EYD  
Sbjct: 413 LKGNQLWEYDPV 424
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501 Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570 Back     alignment and structure
>3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} Length = 118 Back     alignment and structure
>3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} Length = 118 Back     alignment and structure
>1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 Length = 254 Back     alignment and structure
>1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 Length = 254 Back     alignment and structure
>1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 Length = 254 Back     alignment and structure
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* Length = 262 Back     alignment and structure
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* Length = 262 Back     alignment and structure
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* Length = 262 Back     alignment and structure
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* Length = 262 Back     alignment and structure
>1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* Length = 267 Back     alignment and structure
>1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* Length = 267 Back     alignment and structure
>1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* Length = 267 Back     alignment and structure
>1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* Length = 130 Back     alignment and structure
>1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* Length = 130 Back     alignment and structure
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* Length = 263 Back     alignment and structure
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* Length = 263 Back     alignment and structure
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* Length = 263 Back     alignment and structure
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* Length = 263 Back     alignment and structure
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* Length = 432 Back     alignment and structure
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* Length = 432 Back     alignment and structure
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* Length = 432 Back     alignment and structure
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* Length = 258 Back     alignment and structure
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* Length = 258 Back     alignment and structure
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* Length = 258 Back     alignment and structure
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} Length = 570 Back     alignment and structure
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} Length = 570 Back     alignment and structure
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} Length = 570 Back     alignment and structure
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} Length = 570 Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 100.0
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 100.0
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 100.0
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.64
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.63
3a21_A614 Putative secreted alpha-galactosidase; beta-alpha- 99.63
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.47
2dry_A130 29-kDa galactose-binding lectin; earthworm lumbric 99.3
2ao3_A130 29-kDa galactose-binding lectin; earthworm lumbric 99.16
1knl_A130 Endo-1,4-beta-xylanase A; carbohydrate binding mod 99.12
1ggp_B 254 TKL-1, protein (lectin 1 B chain); sugar binding p 99.08
1abr_B 267 Abrin-A; glycosidase/carbohydrate complex, lectin, 99.05
3a07_A118 Actinohivin; carbohydrate-binding module family 13 99.04
3c9z_A 258 Agglutinin II, SNA-II; beta-trefoil, ricin-B domai 99.04
1m2t_B 263 Mistletoe lectin I B chain; ribosome inactivation, 98.96
3a07_A118 Actinohivin; carbohydrate-binding module family 13 98.95
2dry_A130 29-kDa galactose-binding lectin; earthworm lumbric 98.93
3pg0_A165 Threefoil; symmetric design, beta-trefoil, enginee 98.93
1knl_A130 Endo-1,4-beta-xylanase A; carbohydrate binding mod 98.92
2aai_B 262 Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG 98.9
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 98.84
1ggp_B254 TKL-1, protein (lectin 1 B chain); sugar binding p 98.84
3pg0_A165 Threefoil; symmetric design, beta-trefoil, enginee 98.83
2aai_B262 Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG 98.82
2vlc_A 570 Cinnamomin, type 2 ribosome-inactivating protein c 98.79
1vcl_A 432 Hemolytic lectin CEL-III; hemolysis, hemagglutinat 98.76
1vcl_A 432 Hemolytic lectin CEL-III; hemolysis, hemagglutinat 98.7
3phz_A 286 Ricin B-related lectin; beta trefoil, saccharide b 98.67
3phz_A 286 Ricin B-related lectin; beta trefoil, saccharide b 98.65
1m2t_B263 Mistletoe lectin I B chain; ribosome inactivation, 98.63
3c9z_A258 Agglutinin II, SNA-II; beta-trefoil, ricin-B domai 98.62
1abr_B 267 Abrin-A; glycosidase/carbohydrate complex, lectin, 98.6
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 98.59
2ao3_A130 29-kDa galactose-binding lectin; earthworm lumbric 98.58
3vsf_A526 Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana 98.58
3a21_A614 Putative secreted alpha-galactosidase; beta-alpha- 98.53
3vsf_A526 Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana 98.48
2vlc_A570 Cinnamomin, type 2 ribosome-inactivating protein c 98.48
3ef2_A 293 Agglutinin, lectin; beta-trefoil, calcium-binding, 98.31
3ef2_A 293 Agglutinin, lectin; beta-trefoil, calcium-binding, 98.21
3nbc_A148 Ricin B-like lectin; lactose, sugar BIND protein; 97.98
2vse_A841 MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra 97.95
3nbc_A148 Ricin B-like lectin; lactose, sugar BIND protein; 97.93
3aj6_A286 Main hemagglutinin component; toxin, beta-trefoil; 97.85
1ybi_A288 HA33A, HA33/A, non-toxin haemagglutinin HA34; beta 97.83
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 97.76
2vse_A 841 MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra 97.54
3aj6_A286 Main hemagglutinin component; toxin, beta-trefoil; 97.52
1ybi_A288 HA33A, HA33/A, non-toxin haemagglutinin HA34; beta 97.51
1xez_A 721 Hemolysin, cytolysin; pore-forming toxin, Pro-toxi 97.19
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 95.68
1dqg_A135 Mannose receptor; beta trefoil, multilectin recept 95.61
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 95.54
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 95.14
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 93.78
3bcv_A240 Putative glycosyltransferase protein; protein stru 93.48
1sr4_A206 CDT A, cytolethal distending toxin subunit A; bact 92.58
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 89.54
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 87.96
2x2s_A153 Agglutinin, agglutinin SSA; fungal lectin, beta-tr 87.56
1sr4_A206 CDT A, cytolethal distending toxin subunit A; bact 85.6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
Probab=100.00  E-value=2.5e-41  Score=327.10  Aligned_cols=255  Identities=45%  Similarity=0.880  Sum_probs=211.3

Q ss_pred             ceecccCCchHHHHHHHhcCCCeEEEeeEeeecCCCcccccCCCccCCCCCceEEEEeeeeeeEEeeCCHHHHhccc-CC
Q psy3380           2 MCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERKRHK-NA   80 (290)
Q Consensus         2 ~h~e~~~~Wl~pll~~i~~~~~~~v~p~I~~id~~t~~y~~~~~~~~~~~~~~~g~fdw~l~~~w~~~~~~~~~~~~-~~   80 (290)
                      +|+++.++||++|++.+.+++..+++|.|+.++.++++|...       .....|+|+|.+.+.|.+++......+. ..
T Consensus       123 ~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (472)
T 1xhb_A          123 AHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAG-------SDMTYGGFNWKLNFRWYPVPQREMDRRKGDR  195 (472)
T ss_dssp             SSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECC-------CTTEEEEECTTCCEEEEECCHHHHHHTTTCT
T ss_pred             CCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccC-------CCcccceeeccceeecccCCHHHHhcccCCC
Confidence            689999999999999999999999999999999999998632       3456799999999999888776544443 44


Q ss_pred             CCcccCccccCceeeechhhHhhhcccCCCCcccCcccccccccccceecCHHHHhccCCCCCccccCCCCCeEEEEEe-
Q psy3380          81 AEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDK-  159 (290)
Q Consensus        81 ~~p~~sP~~~ggl~~I~~~~F~~~g~yd~~~~~~Gg~~~elsfk~~W~~~p~~~~~~~~~~~~p~~~p~~~GG~~~i~~-  159 (290)
                      ..|+.+|.++||+++|+++.|+.+|+||+++.+||+||+||++|+ |                      ++|+.+.+.| 
T Consensus       196 ~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~-~----------------------~~G~~i~~~p~  252 (472)
T 1xhb_A          196 TLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRI-W----------------------QCGGTLEIVTC  252 (472)
T ss_dssp             TSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHH-H----------------------HTTCEEEEEEE
T ss_pred             CCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHH-H----------------------hcCCeEEEccC
Confidence            668999999999999999999999999999999999999999999 9                      9999999888 


Q ss_pred             ----eeecccCCCCCCC--------------cccccccccc-------ccCCCCCChhhHHHHHHHhccccchhheecc-
Q psy3380         160 ----AFFEKLGTYDSGF--------------DIWGGENLEL-------SFKGDFGDVTSRKELRRNLGCKSFKWYLEVS-  213 (290)
Q Consensus       160 ----~~F~~~g~y~~g~--------------~~~~~e~~e~-------~~~~~~Gdv~~r~~lR~~l~ck~FkWyl~nv-  213 (290)
                          |+++...+|....              +.|..+..+.       ....++|||++|++||++|+||+|+|||++| 
T Consensus       253 ~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~~~~~~~g~~~~~~~lr~~l~~~~f~w~l~~v~  332 (472)
T 1xhb_A          253 SHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENIY  332 (472)
T ss_dssp             EEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHTC
T ss_pred             cEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCCCHHHHHHHHHhcCCCCccchhhhhh
Confidence                7887777774211              1333333332       2246789999999999999999999999998 


Q ss_pred             ----------------cCCCCceeccCCCCCCCCCCeEEEcCCCCCCcceeEEccccccccCCceeeee--CCeEEEEeC
Q psy3380         214 ----------------NDWSGMCIDSACKPTDMHKPVGLYPCHKQGGNQFWMMSKHGEIRRDEACLDYA--GGDVILYPC  275 (290)
Q Consensus       214 ----------------~~~~~~CLD~~~~~~~~g~~v~l~~Ch~~~~nQ~w~lt~~G~Ir~~~~CLD~~--g~~V~l~~C  275 (290)
                                      +.++++|||+.+.  ..++++.+++||+.++||.|.++..|+|++.++|||+.  |+.|+++.|
T Consensus       333 p~~~~p~~~~~~g~i~~~~~~~Cld~~~~--~~g~~v~l~~C~~~~~nQ~w~~~~~g~i~~~~~Cld~~~~g~~v~l~~C  410 (472)
T 1xhb_A          333 PDSQIPRHYFSLGEIRNVETNQCLDNMAR--KENEKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKC  410 (472)
T ss_dssp             TTCSSCSSEEEEECEEETTTCEEEECTTC--CTTEECEEEECCSCCGGGCEEEETTSCEEETTEEEECCSTTCCCEEEEC
T ss_pred             hhhcccccccccceEEECCCCccccccCC--CCCCeEEEEeCCCCCcceeEEEcccceeeecceEEeecCCCceEEEEeC
Confidence                            3457899998763  35778999999998889999999999999989999986  788999999


Q ss_pred             CCCCCceeEEEcc
Q psy3380         276 HGSKGNQYFEYDY  288 (290)
Q Consensus       276 ~g~~~nQ~W~~~~  288 (290)
                      ++++++|+|.++.
T Consensus       411 ~~~~~~Q~W~~~~  423 (472)
T 1xhb_A          411 HHLKGNQLWEYDP  423 (472)
T ss_dssp             CTTCGGGCEEEET
T ss_pred             CCCCcCceEEEeC
Confidence            9976799999975
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* Back     alignment and structure
>1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* Back     alignment and structure
>1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 Back     alignment and structure
>1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* Back     alignment and structure
>3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} Back     alignment and structure
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* Back     alignment and structure
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* Back     alignment and structure
>3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete} Back     alignment and structure
>2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A* Back     alignment and structure
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} Back     alignment and structure
>1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A* Back     alignment and structure
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1 Back     alignment and structure
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} Back     alignment and structure
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B* Back     alignment and structure
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} Back     alignment and structure
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* Back     alignment and structure
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A* Back     alignment and structure
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} Back     alignment and structure
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} Back     alignment and structure
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B* Back     alignment and structure
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B* Back     alignment and structure
>1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B* Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* Back     alignment and structure
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Back     alignment and structure
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* Back     alignment and structure
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora} Back     alignment and structure
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* Back     alignment and structure
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* Back     alignment and structure
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* Back     alignment and structure
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A Back     alignment and structure
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* Back     alignment and structure
>3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A Back     alignment and structure
>1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A Back     alignment and structure
>3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A Back     alignment and structure
>1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum} Back     alignment and structure
>1xez_A Hemolysin, cytolysin; pore-forming toxin, Pro-toxin, water- soluble monomer, beta-prism, beta-trefoil; HET: BOG; 2.30A {Vibrio cholerae} PDB: 3o44_A Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>1dqg_A Mannose receptor; beta trefoil, multilectin receptor, pituitary hormones, sulfated carbohydrate, sugar binding protein; 1.70A {Mus musculus} SCOP: b.42.2.2 PDB: 1dqo_A* 1fwu_A* 1fwv_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A* Back     alignment and structure
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 290
d1xhba2328 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa 9e-27
d1xhba2328 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa 7e-09
d1xhba1131 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosa 4e-12
d1abrb1140 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin 9e-10
d1ggpb1126 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lecti 3e-09
d1knma_129 b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1, 3e-09
d1rzob1135 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (le 1e-08
d1m2tb1136 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lect 2e-08
d2zqna1130 b.42.2.1 (A:131-260) 29-kDa galactose-binding lect 9e-08
d2aaib2127 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lect 1e-07
d1abrb2127 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lect 1e-06
d1hwmb2131 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lect 2e-06
d1hwmb1133 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin 2e-06
d1ggpb2128 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lect 2e-05
d1vcla1150 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domai 3e-05
d1m2tb2126 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lect 6e-05
d1m2tb2126 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lect 4e-04
d1vcla2133 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, dom 0.001
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (260), Expect = 9e-27
 Identities = 81/214 (37%), Positives = 112/214 (52%), Gaps = 15/214 (7%)

Query: 4   CEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQ 63
           CE    WL+PLL  +  +   VV P+I  I DDTFE         +      GGF+W L 
Sbjct: 118 CECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYM-------AGSDMTYGGFNWKLN 170

Query: 64  FNWHAIPERERKRHKN-AAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELS 122
           F W+ +P+RE  R K     PV TPTMAGGLFSID+ +F+++GTYD+G DIWGGENLE+S
Sbjct: 171 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEIS 230

Query: 123 FKFNWHA-----IPERERKRHKNAAEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGG 177
           F+          +           A P   P   G + + +     ++   D   + +  
Sbjct: 231 FRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVW-MDEFKNFFYI 289

Query: 178 ENLELSFKGDFGDVTSRKELRRNLGCKSFKWYLE 211
            +  ++   D+GD++SR  LRR L CK F WYLE
Sbjct: 290 ISPGVTKV-DYGDISSRLGLRRKLQCKPFSWYLE 322
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328 Back     information, alignment and structure
>d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 131 Back     information, alignment and structure
>d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} Length = 140 Back     information, alignment and structure
>d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} Length = 126 Back     information, alignment and structure
>d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} Length = 129 Back     information, alignment and structure
>d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} Length = 135 Back     information, alignment and structure
>d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Length = 136 Back     information, alignment and structure
>d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} Length = 130 Back     information, alignment and structure
>d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} Length = 127 Back     information, alignment and structure
>d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} Length = 127 Back     information, alignment and structure
>d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} Length = 131 Back     information, alignment and structure
>d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} Length = 133 Back     information, alignment and structure
>d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} Length = 128 Back     information, alignment and structure
>d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} Length = 150 Back     information, alignment and structure
>d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Length = 126 Back     information, alignment and structure
>d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Length = 126 Back     information, alignment and structure
>d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} Length = 133 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query290
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.92
d1xhba1131 Polypeptide N-acetylgalactosaminyltransferase 1, C 99.25
d1knma_129 Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas 99.18
d1ggpb1126 Plant cytotoxin B-chain (lectin) {Mongolian snake- 99.18
d2zqna1130 29-kDa galactose-binding lectin {Lumbricus terrest 99.06
d1vcla2133 Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar 99.0
d2aaib2127 Plant cytotoxin B-chain (lectin) {Castor bean (Ric 98.98
d1dqga_134 Mannose receptor {Mouse (Mus musculus) [TaxId: 100 98.97
d1abrb1140 Plant cytotoxin B-chain (lectin) {Abrus precatoriu 98.96
d1knma_129 Xylan binding domain, CBM13 (Endo-1,4-beta-xylanas 98.92
d1m2tb1136 Plant cytotoxin B-chain (lectin) {European mistlet 98.91
d1hwmb1133 Plant cytotoxin B-chain (lectin) {Sambucus ebulus, 98.9
d1m2tb2126 Plant cytotoxin B-chain (lectin) {European mistlet 98.9
d1ggpb2128 Plant cytotoxin B-chain (lectin) {Mongolian snake- 98.89
d1m2tb2126 Plant cytotoxin B-chain (lectin) {European mistlet 98.89
d1abrb2127 Plant cytotoxin B-chain (lectin) {Abrus precatoriu 98.88
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 98.88
d1rzob1135 Plant cytotoxin B-chain (lectin) {Castor bean (Ric 98.88
d1ggpb2128 Plant cytotoxin B-chain (lectin) {Mongolian snake- 98.81
d1hwmb2131 Plant cytotoxin B-chain (lectin) {Sambucus ebulus, 98.79
d1vcla1150 Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar 98.79
d1hwmb2131 Plant cytotoxin B-chain (lectin) {Sambucus ebulus, 98.76
d1xhba1131 Polypeptide N-acetylgalactosaminyltransferase 1, C 98.72
d2aaib2127 Plant cytotoxin B-chain (lectin) {Castor bean (Ric 98.7
d1vcla2133 Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar 98.68
d2zqna1130 29-kDa galactose-binding lectin {Lumbricus terrest 98.64
d1abrb2127 Plant cytotoxin B-chain (lectin) {Abrus precatoriu 98.64
d1rzob1135 Plant cytotoxin B-chain (lectin) {Castor bean (Ric 98.62
d1ggpb1126 Plant cytotoxin B-chain (lectin) {Mongolian snake- 98.59
d1m2tb1136 Plant cytotoxin B-chain (lectin) {European mistlet 98.57
d1abrb1140 Plant cytotoxin B-chain (lectin) {Abrus precatoriu 98.43
d1hwmb1133 Plant cytotoxin B-chain (lectin) {Sambucus ebulus, 98.4
d1vcla1150 Hemolytic lectin CEL-III, domains 1 and 2 {Cucumar 98.3
d2ihoa1154 Agglutinin MOA, N-terminal domain {Fairy-ring mush 98.26
d1sr4a_167 Cytolethal distending toxin subunit A {Haemophilus 98.25
d2ihoa1154 Agglutinin MOA, N-terminal domain {Fairy-ring mush 98.24
d1qxma2138 Hemagglutinin component Ha1 {Clostridium botulinum 98.14
d1qxma1145 Hemagglutinin component Ha1 {Clostridium botulinum 97.87
d1qxma2138 Hemagglutinin component Ha1 {Clostridium botulinum 97.78
d1qxma1145 Hemagglutinin component Ha1 {Clostridium botulinum 97.64
d1dqga_134 Mannose receptor {Mouse (Mus musculus) [TaxId: 100 97.43
d1sr4a_167 Cytolethal distending toxin subunit A {Haemophilus 97.17
d1upsa2131 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 96.1
d1pzta_271 beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos 95.9
d1upsa2131 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 95.74
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=2.7e-25  Score=202.19  Aligned_cols=182  Identities=47%  Similarity=0.925  Sum_probs=147.7

Q ss_pred             ceecccCCchHHHHHHHhcCCCeEEEeeEeeecCCCcccccCCCccCCCCCceEEEEeeeeeeEEeeCCHHHHh-cccCC
Q psy3380           2 MCCEVQKRWLQPLLDVLARNSSHVVSPLIANICDDTFELRFPPGRLTSSYKFFIGGFDWNLQFNWHAIPERERK-RHKNA   80 (290)
Q Consensus         2 ~h~e~~~~Wl~pll~~i~~~~~~~v~p~I~~id~~t~~y~~~~~~~~~~~~~~~g~fdw~l~~~w~~~~~~~~~-~~~~~   80 (290)
                      +++++.++||+.|++.+.+++..+++|.++.++.++++|...       ....+++|+|.+.+.|.+++..... .....
T Consensus       116 ~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (328)
T d1xhba2         116 AHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAG-------SDMTYGGFNWKLNFRWYPVPQREMDRRKGDR  188 (328)
T ss_dssp             SSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECC-------CTTEEEEECTTCCEEEEECCHHHHHHTTTCT
T ss_pred             cccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccC-------Cccccccccccccccccccchhhhhcccccc
Confidence            578999999999999999999999999999999999998753       3456789999999999888776543 34556


Q ss_pred             CCcccCccccCceeeechhhHhhhcccCCCCcccCcccccccccccceecCHHHHhccCCCCCccccCCCCCeEEEEEe-
Q psy3380          81 AEPVWTPTMAGGLFSIDKAFFEKLGTYDSGFDIWGGENLELSFKFNWHAIPERERKRHKNAAEPVWTPTMAGGLFSIDK-  159 (290)
Q Consensus        81 ~~p~~sP~~~ggl~~I~~~~F~~~g~yd~~~~~~Gg~~~elsfk~~W~~~p~~~~~~~~~~~~p~~~p~~~GG~~~i~~-  159 (290)
                      ..|+.+|.+.|++++|.++.|..+|+||+++..|||||+||++|+ |                      .+|+.+...| 
T Consensus       189 ~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~-~----------------------~~G~~i~~~p~  245 (328)
T d1xhba2         189 TLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRI-W----------------------QCGGTLEIVTC  245 (328)
T ss_dssp             TSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHH-H----------------------HTTCEEEEEEE
T ss_pred             ccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHH-H----------------------HhCCeEEEeCC
Confidence            788899999999999999999999999999999999999999998 9                      9999999998 


Q ss_pred             ----eeecccCCCCC--C-C-----------cccccccccc-------ccCCCCCChhhHHHHHHHhccccchhheecc
Q psy3380         160 ----AFFEKLGTYDS--G-F-----------DIWGGENLEL-------SFKGDFGDVTSRKELRRNLGCKSFKWYLEVS  213 (290)
Q Consensus       160 ----~~F~~~g~y~~--g-~-----------~~~~~e~~e~-------~~~~~~Gdv~~r~~lR~~l~ck~FkWyl~nv  213 (290)
                          |+++...+|..  + .           ++|..|..+.       ....++|||++|++||++|+||+|+|||++|
T Consensus       246 ~~v~H~~~~~~~~~~~~~~~~~~~~N~~r~~e~wl~~yk~~~~~~~~~~~~~~~~~i~~r~~Lr~~l~ck~f~w~~~~~  324 (328)
T d1xhba2         246 SHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQCKPFSWYLENI  324 (328)
T ss_dssp             EEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHHHHHTTCCCHHHHHHHT
T ss_pred             eEEEEeCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCcccHHHHHHHHHHhCCCChHHHHhhC
Confidence                88887777732  1 1           1233333322       2235789999999999999999999999987
>d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} Back     information, alignment and structure
>d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} Back     information, alignment and structure
>d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} Back     information, alignment and structure
>d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} Back     information, alignment and structure
>d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} Back     information, alignment and structure
>d1knma_ b.42.2.1 (A:) Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Back     information, alignment and structure
>d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} Back     information, alignment and structure
>d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Back     information, alignment and structure
>d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} Back     information, alignment and structure
>d1m2tb2 b.42.2.1 (B:385-510) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Back     information, alignment and structure
>d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} Back     information, alignment and structure
>d1ggpb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} Back     information, alignment and structure
>d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} Back     information, alignment and structure
>d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} Back     information, alignment and structure
>d1hwmb2 b.42.2.1 (B:136-266) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} Back     information, alignment and structure
>d1xhba1 b.42.2.1 (A:423-553) Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2aaib2 b.42.2.1 (B:136-262) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} Back     information, alignment and structure
>d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} Back     information, alignment and structure
>d2zqna1 b.42.2.1 (A:131-260) 29-kDa galactose-binding lectin {Lumbricus terrestris [TaxId: 6398]} Back     information, alignment and structure
>d1abrb2 b.42.2.1 (B:141-267) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} Back     information, alignment and structure
>d1rzob1 b.42.2.1 (B:2001-2135) Plant cytotoxin B-chain (lectin) {Castor bean (Ricinus communis), Ricin [TaxId: 3988]} Back     information, alignment and structure
>d1ggpb1 b.42.2.1 (B:11-140) Plant cytotoxin B-chain (lectin) {Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId: 3677]} Back     information, alignment and structure
>d1m2tb1 b.42.2.1 (B:249-384) Plant cytotoxin B-chain (lectin) {European mistletoe (Viscum album) [TaxId: 3972]} Back     information, alignment and structure
>d1abrb1 b.42.2.1 (B:1-140) Plant cytotoxin B-chain (lectin) {Abrus precatorius [TaxId: 3816]} Back     information, alignment and structure
>d1hwmb1 b.42.2.1 (B:3-135) Plant cytotoxin B-chain (lectin) {Sambucus ebulus, ebulin [TaxId: 28503]} Back     information, alignment and structure
>d1vcla1 b.42.2.1 (A:1-150) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]} Back     information, alignment and structure
>d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} Back     information, alignment and structure
>d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} Back     information, alignment and structure
>d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} Back     information, alignment and structure
>d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} Back     information, alignment and structure
>d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} Back     information, alignment and structure
>d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} Back     information, alignment and structure
>d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} Back     information, alignment and structure
>d1dqga_ b.42.2.2 (A:) Mannose receptor {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} Back     information, alignment and structure
>d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure