Psyllid ID: psy3492

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSFQDAQT
Secondary Structure (PSIPRED)
ccccHHHHHcHHHHHHHHHHccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEcHHHHHHHHcccccccEccccccHHHHHHHHHHHHHHHccHHHcccccccHccHHHHHHHHHccEEEEEccccccc
Coil and Loop (DISEMBL)
MPRLQVLISYNWCLKRHlnthikpfncALCEYKAARPERLATHVIKVHNkricskcsflADDQETLNEHLQQHIFWEcsfqdaqt
Flexible Loop (DISEMBL)
MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSFQDAQT
Low Complexity Region (SEG)
MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSFQDAQT
Disordered region (IsUnstruct)
***LQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSF*****
Disordered Region (DISOPRED)
****QVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSFQ****
Disordered Region (DISEMBL)
MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSFQDAQT
Disordered Region (DISPRO)
*PRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSFQ****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQHIFWECSFQDAQT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
Q7YU81	1214	Protein charlatan OS=Dros	yes	N/A	0.694	0.048	0.745	3e-21
Q2EI21	1501	RE1-silencing transcripti	N/A	N/A	0.717	0.040	0.318	0.0002
Q61164	736	Transcriptional repressor	yes	N/A	0.694	0.080	0.327	0.0003
Q96JM2	2506	Zinc finger protein 462 O	yes	N/A	0.658	0.022	0.419	0.0005
Q8VIG1	1082	RE1-silencing transcripti	no	N/A	0.717	0.056	0.318	0.0005
Q13127	1097	RE1-silencing transcripti	no	N/A	0.717	0.055	0.318	0.0007
O54963	1069	RE1-silencing transcripti	no	N/A	0.717	0.057	0.318	0.0008
Q01611	794	Zinc finger Y-chromosomal	N/A	N/A	0.705	0.075	0.369	0.0008

>sp|Q7YU81|CHN_DROME Protein charlatan OS=Drosophila melanogaster GN=chn PE=2 SV=3

 Score =  100 bits (249), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/59 (74%), Positives = 48/59 (81%)

Query: 12  WCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           W LKRHLNTH KPF C LC+YKAAR ERLATHV+KVHNKR CSKCS+LAD QE    H+
Sbjct: 509 WGLKRHLNTHTKPFVCLLCDYKAARSERLATHVLKVHNKRACSKCSYLADTQEEYQAHM 567

Probable transcription factor involved in the development of the adult pattern of macrochaetae. Required for accumulation of achaete (ac) and scute (sc) in proneural clusters. Probably acts by binding to the proneural cluster-specific enhancers of the ac/sc complex and increasing enhancer efficiency, thereby acting as a stimulator of ac/sc expression in proneural clusters. Also required for correct development of the embryonic/larval peripheral nervous system (PNS).
Drosophila melanogaster (taxid: 7227)

>sp|Q2EI21|RESTA_XENLA RE1-silencing transcription factor A OS=Xenopus laevis GN=rest-a PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 14  LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHN---KRICSKCSFLADDQETLNE 68
           L RH+ TH   KPF C  C Y A+    +  H  +VHN      C  C +   D+    +
Sbjct: 317 LTRHMRTHSGEKPFKCEQCSYVASNQHEVTRHARQVHNGPKPLTCPHCDYKTADRSNFKK 376

Query: 69  HLQQHI 74
           H++ H+
Sbjct: 377 HVELHV 382

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells (By similarity). Plays a role in the early development of the nervous system and is required for proper patterning of the neuroectoderm during gastrulation. This involves the correct speciation of the neuroepithelial domain and adequate development of the non-neural ectoderm.

Xenopus laevis (taxid: 8355)

>sp|Q61164|CTCF_MOUSE Transcriptional repressor CTCF OS=Mus musculus GN=Ctcf PE=1 SV=2

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 15  KRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRI--CSKCSFLADDQETLNEHLQQ 72
           +R+ +TH KPF C++C+Y +    +L  H+     +R   CS CS+ + D   L  H++ 
Sbjct: 341 RRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRT 400

Query: 73  H 73
           H
Sbjct: 401 H 401

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping (By similarity). Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Mus musculus (taxid: 10090)

>sp|Q96JM2|ZN462_HUMAN Zinc finger protein 462 OS=Homo sapiens GN=ZNF462 PE=1 SV=3

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 6/62 (9%)

Query: 14   LKRHLNTHI---KPFNCALCEYKAARPERLATHVIKVHNKR---ICSKCSFLADDQETLN 67
            L RH+ TH    KPF C LC +K++   RL TH++K H       CS CSF       L 
Sbjct: 2040 LDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQLK 2099

Query: 68   EH 69
            EH
Sbjct: 2100 EH 2101

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8VIG1|REST_MOUSE RE1-silencing transcription factor OS=Mus musculus GN=Rest PE=2 SV=2

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 14  LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRI---CSKCSFLADDQETLNE 68
           L RH+ TH   KPF C  C Y A+    +  H  +VHN      C  C +   D+    +
Sbjct: 314 LTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHNGPKPLNCPHCDYKTADRSNFKK 373

Query: 69  HLQQHI 74
           H++ H+
Sbjct: 374 HVELHV 379

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Mus musculus (taxid: 10090)

>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 14  LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRI---CSKCSFLADDQETLNE 68
           L RH+ TH   KPF C  C Y A+    +  H  +VHN      C  C +   D+    +
Sbjct: 319 LTRHMRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHNGPKPLNCPHCDYKTADRSNFKK 378

Query: 69  HLQQHI 74
           H++ H+
Sbjct: 379 HVELHV 384

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Homo sapiens (taxid: 9606)

>sp|O54963|REST_RAT RE1-silencing transcription factor OS=Rattus norvegicus GN=Rest PE=2 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 14  LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRI---CSKCSFLADDQETLNE 68
           L RH+ TH   KPF C  C Y A+    +  H  +VHN      C  C +   D+    +
Sbjct: 318 LTRHMRTHSGEKPFKCDQCNYVASNQHEVTRHARQVHNGPKPLNCPHCDYKTADRSNFKK 377

Query: 69  HLQQHI 74
           H++ H+
Sbjct: 378 HVELHV 383

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Rattus norvegicus (taxid: 10116)

>sp|Q01611|ZFY1_XENLA Zinc finger Y-chromosomal protein 1 OS=Xenopus laevis GN=zfy1 PE=2 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 14  LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLAD---DQETLNE 68
           LK+H+ TH   KP+ C  C+Y++A    L THV   H+K +  KC        D + L E
Sbjct: 552 LKKHMRTHTGEKPYLCQYCDYRSADSSNLKTHVKTKHSKEMPFKCDICLQTFTDSKDLQE 611

Query: 69  HLQQH 73
           H   H
Sbjct: 612 HAILH 616

Probable transcriptional activator.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
189233785	891	PREDICTED: similar to GA11205-PA [Tribol	0.741	0.070	0.746	3e-21
357618354	635	hypothetical protein KGM_09661 [Danaus p	0.717	0.096	0.770	3e-21
242008719	1029	hypothetical protein Phum_PHUM177130 [Pe	0.741	0.061	0.698	1e-20
312380306	1403	hypothetical protein AND_07670 [Anophele	0.729	0.044	0.677	1e-20
345495386	589	PREDICTED: hypothetical protein LOC10011	0.741	0.106	0.734	2e-20
345495388	718	PREDICTED: hypothetical protein LOC10011	0.741	0.087	0.734	2e-20
170033371	513	conserved hypothetical protein [Culex qu	0.717	0.118	0.721	3e-20
328781820	735	PREDICTED: hypothetical protein LOC10057	0.741	0.085	0.718	6e-20
350409540	535	PREDICTED: hypothetical protein LOC10074	0.741	0.117	0.718	7e-20
195486187	1367	GE13631 [Drosophila yakuba] gi|194177499	0.694	0.043	0.745	8e-20

>gi|189233785|ref|XP_001814704.1| PREDICTED: similar to GA11205-PA [Tribolium castaneum] gi|270014956|gb|EFA11404.1| hypothetical protein TcasGA2_TC013578 [Tribolium castaneum]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 52/63 (82%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NWCLKRH+NTH+KPF C LC+YKAAR ERLATHV+KVHNKR C KCSFLADD   L  H 
Sbjct: 423 NWCLKRHMNTHLKPFVCGLCDYKAARSERLATHVLKVHNKRACGKCSFLADDPAQLTVHQ 482

Query: 71  QQH 73
           Q+H
Sbjct: 483 QEH 485

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357618354|gb|EHJ71373.1| hypothetical protein KGM_09661 [Danaus plexippus]

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/61 (77%), Positives = 52/61 (85%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NWCLKRHLNTH+KPF CALCEYKAAR ERLATHV KVHNK+ C+KC FLADD + L  HL
Sbjct: 415 NWCLKRHLNTHLKPFACALCEYKAARAERLATHVHKVHNKKACAKCPFLADDPQQLALHL 474

Query: 71  Q 71
           +
Sbjct: 475 R 475

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242008719|ref|XP_002425148.1| hypothetical protein Phum_PHUM177130 [Pediculus humanus corporis] gi|212508842|gb|EEB12410.1| hypothetical protein Phum_PHUM177130 [Pediculus humanus corporis]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 52/63 (82%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NWCLKRHLNTH+KPF C LC+YKAAR ERLATHV+KVHNKR C +CS+L +D   L  H+
Sbjct: 436 NWCLKRHLNTHLKPFVCGLCDYKAARSERLATHVLKVHNKRACGRCSYLGEDSAQLAMHM 495

Query: 71  QQH 73
           Q+H
Sbjct: 496 QEH 498

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312380306|gb|EFR26338.1| hypothetical protein AND_07670 [Anopheles darlingi]

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/62 (67%), Positives = 50/62 (80%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NW LKRHLNTH KP+ C LC+YKAAR ERLATHV KVHN++ C KC+F+ADDQ  L+ HL
Sbjct: 471 NWGLKRHLNTHTKPYVCLLCDYKAARSERLATHVFKVHNRKACGKCNFIADDQSQLDAHL 530

Query: 71  QQ 72
            +
Sbjct: 531 HE 532

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495386|ref|XP_003427497.1| PREDICTED: hypothetical protein LOC100117235 isoform 2 [Nasonia vitripennis]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NWCLKRHLNTH+KP+ CALCEYKAAR ERLATHV+KVHN+R CS+CSFLA+D   L  H 
Sbjct: 440 NWCLKRHLNTHLKPYACALCEYKAARAERLATHVLKVHNRRQCSRCSFLAEDMTQLQVH- 498

Query: 71  QQHI 74
           Q H+
Sbjct: 499 QLHV 502

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495388|ref|XP_001601536.2| PREDICTED: hypothetical protein LOC100117235 isoform 1 [Nasonia vitripennis]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 1/64 (1%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NWCLKRHLNTH+KP+ CALCEYKAAR ERLATHV+KVHN+R CS+CSFLA+D   L  H 
Sbjct: 440 NWCLKRHLNTHLKPYACALCEYKAARAERLATHVLKVHNRRQCSRCSFLAEDMTQLQVH- 498

Query: 71  QQHI 74
           Q H+
Sbjct: 499 QLHV 502

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170033371|ref|XP_001844551.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167874289|gb|EDS37672.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 51/61 (83%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NW LKRHLNTH KP+ C LC+YKAAR ERLATHV KVHNK+ CSKC+F A+DQ+ LN H+
Sbjct: 308 NWGLKRHLNTHTKPYVCMLCDYKAARSERLATHVFKVHNKKACSKCTFFAEDQDQLNAHM 367

Query: 71  Q 71
           Q
Sbjct: 368 Q 368

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781820|ref|XP_003250037.1| PREDICTED: hypothetical protein LOC100578984 [Apis mellifera]

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NWCLKRHLNTH+KPF C LCEYKAAR ERLATHV+KVHN+R CS+CSFL +D   L  H 
Sbjct: 424 NWCLKRHLNTHLKPFACTLCEYKAARAERLATHVLKVHNRRQCSRCSFLGEDAAQLQMH- 482

Query: 71  QQHI 74
           Q H+
Sbjct: 483 QLHV 486

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409540|ref|XP_003488772.1| PREDICTED: hypothetical protein LOC100742625 isoform 2 [Bombus impatiens]

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 11  NWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           NWCLKRHLNTH+KPF C LCEYKAAR ERLATHV+KVHN+R CS+CSFL +D   L  H 
Sbjct: 400 NWCLKRHLNTHLKPFACTLCEYKAARAERLATHVLKVHNRRQCSRCSFLGEDAAQLQMH- 458

Query: 71  QQHI 74
           Q H+
Sbjct: 459 QLHV 462

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195486187|ref|XP_002091398.1| GE13631 [Drosophila yakuba] gi|194177499|gb|EDW91110.1| GE13631 [Drosophila yakuba]

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/59 (74%), Positives = 48/59 (81%)

Query: 12  WCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
           W LKRHLNTH KPF C LC+YKAAR ERLATHV+KVHNKR CSKCS+LAD QE    H+
Sbjct: 589 WGLKRHLNTHTKPFVCLLCDYKAARSERLATHVLKVHNKRACSKCSYLADTQEEYQAHM 647

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
FB|FBgn0015371	1214	chn "charlatan" [Drosophila me	0.694	0.048	0.745	1.3e-19
UNIPROTKB|F1NBG4	394	ZFX "Uncharacterized protein"	0.694	0.149	0.403	2.7e-06
ZFIN|ZDB-GENE-031118-80	666	zfp64 "zinc finger protein 64	0.705	0.090	0.384	5.7e-06
RGD|2321501	635	Ctcfl "CCCTC-binding factor (z	0.694	0.092	0.327	6.9e-06
UNIPROTKB|H3BLX4	1449	ZNF462 "Zinc finger protein 46	0.694	0.040	0.380	7e-06
ZFIN|ZDB-GENE-110914-121	541	si:ch211-202h22.10 "si:ch211-2	0.717	0.112	0.369	7.1e-06
UNIPROTKB|F1NQX8	795	ZFX "Uncharacterized protein"	0.694	0.074	0.403	7.2e-06
UNIPROTKB|I3L710	399	LOC100624697 "Uncharacterized	0.694	0.147	0.327	7.4e-06
UNIPROTKB|E1C5J4	2410	Gga.54345 "Uncharacterized pro	0.705	0.024	0.417	7.5e-06
ZFIN|ZDB-GENE-990415-282	179	znf6 "zinc finger-6 type gene"	0.670	0.318	0.375	8e-06

FB|FBgn0015371 chn "charlatan" [Drosophila melanogaster (taxid:7227)]

 Score = 247 (92.0 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 44/59 (74%), Positives = 48/59 (81%)

Query:    12 WCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
             W LKRHLNTH KPF C LC+YKAAR ERLATHV+KVHNKR CSKCS+LAD QE    H+
Sbjct:   509 WGLKRHLNTHTKPFVCLLCDYKAARSERLATHVLKVHNKRACSKCSYLADTQEEYQAHM 567

GO:0007422 "peripheral nervous system development" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007399 "nervous system development" evidence=NAS

GO:0005634 "nucleus" evidence=IC

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA;NAS

GO:0001700 "embryonic development via the syncytial blastoderm" evidence=IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0007423 "sensory organ development" evidence=IMP

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0001654 "eye development" evidence=IMP

GO:0001078 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042683 "negative regulation of compound eye cone cell fate specification" evidence=IMP

GO:0007458 "progression of morphogenetic furrow involved in compound eye morphogenesis" evidence=IMP

UNIPROTKB|F1NBG4 ZFX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 116 (45.9 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 25/62 (40%), Positives = 31/62 (50%)

Query:    14 LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQ 71
             LK+H+  H   KP+ C  CEY++A    L THV   H+K   SKC           E LQ
Sbjct:   152 LKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKETSSKCDICFQTFSDTKE-LQ 210

Query:    72 QH 73
             QH
Sbjct:   211 QH 212

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-031118-80 zfp64 "zinc finger protein 64 homolog (mouse)" [Danio rerio (taxid:7955)]

 Score = 116 (45.9 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 25/65 (38%), Positives = 32/65 (49%)

Query:    14 LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRI---CSKCSFLADDQETLNE 68
             LKRH   H   KP+ C LC+Y+ A    L +HV   H+      CSKC F    +  L  
Sbjct:   247 LKRHSRVHSGEKPYKCDLCDYRCAMKANLKSHVHLKHSASDSFHCSKCDFQCSTKAALRH 306

Query:    69 HLQQH 73
             H +QH
Sbjct:   307 HSRQH 311

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|2321501 Ctcfl "CCCTC-binding factor (zinc finger protein)-like" [Rattus norvegicus (taxid:10116)]

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query:    15 KRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRI--CSKCSFLADDQETLNEHLQQ 72
             +R+ +TH KPF C+LC+Y +    +L  H+     +R   CS+C++ + D   L  H++ 
Sbjct:   330 RRYKHTHEKPFKCSLCKYASVEASKLKRHIRSHTGERPFQCSQCAYASKDTYKLKRHMRT 389

Query:    73 H 73
             H
Sbjct:   390 H 390

GO:0003677 "DNA binding" evidence=ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0016571 "histone methylation" evidence=IEA;ISO

GO:0042393 "histone binding" evidence=IEA;ISO

GO:0043046 "DNA methylation involved in gamete generation" evidence=IEA;ISO

GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0051569 "regulation of histone H3-K4 methylation" evidence=IEA;ISO

UNIPROTKB|H3BLX4 ZNF462 "Zinc finger protein 462" [Homo sapiens (taxid:9606)]

 Score = 119 (46.9 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 24/63 (38%), Positives = 37/63 (58%)

Query:    14 LKRHLNTHI---KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHL 70
             L RH+ TH    KPF C LC +K++   RL TH++K H      KCS+ +    T+++ L
Sbjct:   983 LDRHMQTHHGHHKPFRCKLCSFKSSYNSRLKTHILKAHAGEHAYKCSWCSFSTMTISQ-L 1041

Query:    71 QQH 73
             ++H
Sbjct:  1042 KEH 1044

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-110914-121 si:ch211-202h22.10 "si:ch211-202h22.10" [Danio rerio (taxid:7955)]

 Score = 114 (45.2 bits), Expect = 7.1e-06, P = 7.1e-06
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query:    13 CLKRHLNTHI--KPFNCALCEYKAARPERLATHV-IKVHNKR-ICSKCSFLADDQETLNE 68
             CLK H++ HI  KPFNC+LCE      + L  H+ I V  K  +C +C      +++L  
Sbjct:   186 CLKSHMSVHIEEKPFNCSLCEMSFTHQQSLKRHMLIHVGEKPYVCRQCGKSFSVKQSLES 245

Query:    69 HLQQH 73
             H++ H
Sbjct:   246 HIRIH 250

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1NQX8 ZFX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 116 (45.9 bits), Expect = 7.2e-06, P = 7.2e-06
 Identities = 25/62 (40%), Positives = 31/62 (50%)

Query:    14 LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQ 71
             LK+H+  H   KP+ C  CEY++A    L THV   H+K   SKC           E LQ
Sbjct:   553 LKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKETSSKCDICFQTFSDTKE-LQ 611

Query:    72 QH 73
             QH
Sbjct:   612 QH 613

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3L710 LOC100624697 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 112 (44.5 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query:    15 KRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNKRI--CSKCSFLADDQETLNEHLQQ 72
             +R+ +TH KPF C++C+Y +    +L  H+     +R   CS CS+ + D   L  H++ 
Sbjct:    13 RRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRT 72

Query:    73 H 73
             H
Sbjct:    73 H 73

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E1C5J4 Gga.54345 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 121 (47.7 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 28/67 (41%), Positives = 36/67 (53%)

Query:    14 LKRHLNTHI---KPFNCALCEYKAARPERLATHVIKVH---NKRICSKCSFLADDQETLN 67
             L RH+ TH    KPF C LC +K++   RL TH++K H   +   CS CSF       L 
Sbjct:  1951 LDRHMQTHHGHHKPFRCKLCPFKSSYNSRLKTHILKAHAGEHAYKCSSCSFSTMTISQLK 2010

Query:    68 EH-LQQH 73
             EH L+ H
Sbjct:  2011 EHSLKVH 2017

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043392 "negative regulation of DNA binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

ZFIN|ZDB-GENE-990415-282 znf6 "zinc finger-6 type gene" [Danio rerio (taxid:7955)]

 Score = 104 (41.7 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 24/64 (37%), Positives = 32/64 (50%)

Query:    14 LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSF----LADDQETLN 67
             LK+H+ TH   KPF+C  CE+  A    L TH+   H   +  KC       ADD+E L 
Sbjct:   114 LKKHMRTHTGEKPFHCQHCEFSCADQSNLKTHIKSKHGTDLPFKCGHCPQAFADDKE-LQ 172

Query:    68 EHLQ 71
              H +
Sbjct:   173 RHAE 176

GO:0003677 "DNA binding" evidence=ISS

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7YU81	CHN_DROME	No assigned EC number	0.7457	0.6941	0.0485	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
KOG2462|consensus	279		99.92
KOG2462|consensus	279		99.87
KOG3576|consensus	267		99.62
KOG3623|consensus	1007		99.59
KOG3576|consensus	267		99.56
KOG3623|consensus	1007		99.52
KOG3608|consensus	467		99.44
KOG1074|consensus	958		99.44
PHA02768	55	hypothetical protein; Provisional	99.37
PHA00733	128	hypothetical protein	99.32
KOG3608|consensus	467		99.26
PHA02768	55	hypothetical protein; Provisional	99.16
KOG1074|consensus	958		99.04
PHA00732	79	hypothetical protein	98.96
PLN03086	567	PRLI-interacting factor K; Provisional	98.95
PHA00733	128	hypothetical protein	98.91
KOG3993|consensus	500		98.8
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.8
PHA00732	79	hypothetical protein	98.61
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.61
PHA00616	44	hypothetical protein	98.57
PLN03086	567	PRLI-interacting factor K; Provisional	98.49
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.36
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.29
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.28
PHA00616	44	hypothetical protein	98.27
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.21
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.06
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.06
smart00355	26	ZnF_C2H2 zinc finger.	98.05
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.03
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.91
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.87
smart00355	26	ZnF_C2H2 zinc finger.	97.59
KOG3993|consensus	500		97.5
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.46
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	97.35
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.24
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.14
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.02
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.02
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.98
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.45
PRK04860	160	hypothetical protein; Provisional	96.34
PRK04860	160	hypothetical protein; Provisional	95.85
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.73
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.38
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.28
KOG2186|consensus	276		94.12
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	93.82
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	93.69
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	93.49
KOG2231|consensus	669		93.12
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	92.63
KOG1146|consensus	1406		92.19
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	91.97
COG4049	65	Uncharacterized protein containing archaeal-type C	91.45
smart00531	147	TFIIE Transcription initiation factor IIE.	91.08
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.02
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	90.89
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	89.71
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	89.64
KOG1146|consensus	1406		89.45
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	88.96
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	88.33
COG5151	421	SSL1 RNA polymerase II transcription initiation/nu	88.04
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	87.82
cd00730	50	rubredoxin Rubredoxin; nonheme iron binding domain	87.66
KOG4167|consensus	907		87.55
PF14353	128	CpXC: CpXC protein	87.21
PTZ00255	90	60S ribosomal protein L37a; Provisional	87.12
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.77
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.68
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	86.66
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	86.36
TIGR00280	91	L37a ribosomal protein L37a. This model finds euka	86.3
KOG2482|consensus	423		86.13
PRK06266	178	transcription initiation factor E subunit alpha; V	85.8
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	85.22
PF01780	90	Ribosomal_L37ae: Ribosomal L37ae protein family; I	84.67
KOG2893|consensus	341		84.64
COG1773	55	Rubredoxin [Energy production and conversion]	84.61
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	84.36
PF13878	41	zf-C2H2_3: zinc-finger of acetyl-transferase ESCO	84.19
PF00301	47	Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubred	83.88
PRK03976	90	rpl37ae 50S ribosomal protein L37Ae; Reviewed	83.82
KOG2907|consensus	116		81.59
KOG4173|consensus	253		81.41
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	80.81
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	80.78
COG5236	493	Uncharacterized conserved protein, contains RING Z	80.32

>KOG2462|consensus

Probab=99.92  E-value=3.2e-25  Score=123.31  Aligned_cols=79  Identities=27%  Similarity=0.444  Sum_probs=75.2

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---   74 (85)
                      |+.|+|+|.....|++|+++|+-+.+|.+||+.|..+.-|+-|+ +.|+|   |.|+.|+|+|+.+++|+.|++||.   
T Consensus       164 C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHi-RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K  242 (279)
T KOG2462|consen  164 CKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHI-RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVK  242 (279)
T ss_pred             CCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhccc-ccccCCCCccCCcccchhcchHHHHHHHHhhcCCc
Confidence            78999999999999999999998999999999999999999999 79999   999999999999999999999999   


Q ss_pred             cccCcC
Q psy3492          75 FWECSF   80 (85)
Q Consensus        75 ~~~C~~   80 (85)
                      .|+|+-
T Consensus       243 ~~qC~~  248 (279)
T KOG2462|consen  243 KHQCPR  248 (279)
T ss_pred             cccCcc
Confidence            888864

>KOG2462|consensus

Probab=99.87  E-value=8.3e-23  Score=113.76  Aligned_cols=71  Identities=28%  Similarity=0.512  Sum_probs=68.2

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhh
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |.+|||.|...+.|+.|+++|+  |||.|..|+++|..+++|..|+ .+|.+   |+|+.|+|.|...+-|.+|...
T Consensus       190 C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm-QTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  190 CGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM-QTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHH-HhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            7899999999999999999999  9999999999999999999999 69998   9999999999999999999753

>KOG3576|consensus

Probab=99.62  E-value=7.8e-17  Score=87.21  Aligned_cols=73  Identities=25%  Similarity=0.343  Sum_probs=65.4

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHh-hcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQ-QHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~-~h~   74 (85)
                      |.+|+|.|....-|.+|++.|.  +.+.|..||+.|...-.|++|+ +.|+|   |+|..|+++|.+.-.|..|++ +|.
T Consensus       120 CrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~-rthtgvrpykc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  120 CRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             eehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhh-ccccCccccchhhhhHHHHhhccHHHHHHHHcC
Confidence            6789999999999999999998  8899999999999999999999 79999   999999999999999999977 554

>KOG3623|consensus

Probab=99.59  E-value=2.7e-16  Score=97.42  Aligned_cols=70  Identities=20%  Similarity=0.433  Sum_probs=67.0

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHh
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |..|+|+|...++|.+|..-|+  +||+|.+|.++|..+.-|..|. +.|.|   |.|++|+|.|..+.....||-
T Consensus       897 CDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHk-RLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  897 CDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHK-RLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             HHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhh-hhccCCCcchhhhhhhhcccccchHhhhc
Confidence            6789999999999999999999  9999999999999999999999 79999   999999999999999999974

>KOG3576|consensus

Probab=99.56  E-value=3.6e-15  Score=80.84  Aligned_cols=75  Identities=29%  Similarity=0.523  Sum_probs=68.3

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC-------------ccCCcCccccCCHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK-------------RICSKCSFLADDQET   65 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~-------------~~C~~c~~~f~~~~~   65 (85)
                      |..|||.|.....|++|+++|+  +||+|..|+++|.+.-+|..|+..+|..             |.|+.||..-..+..
T Consensus       148 ct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~  227 (267)
T KOG3576|consen  148 CTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEV  227 (267)
T ss_pred             HhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhH
Confidence            5679999999999999999999  9999999999999999999999767753             789999999999999


Q ss_pred             HHHHHhhccc
Q psy3492          66 LNEHLQQHIF   75 (85)
Q Consensus        66 l~~h~~~h~~   75 (85)
                      ...|+..|.+
T Consensus       228 ~~~h~~~~hp  237 (267)
T KOG3576|consen  228 YYLHLKLHHP  237 (267)
T ss_pred             HHHHHHhcCC
Confidence            9999988773

>KOG3623|consensus

Probab=99.52  E-value=6.8e-15  Score=91.41  Aligned_cols=79  Identities=29%  Similarity=0.490  Sum_probs=57.1

Q ss_pred             CCCCcccccChHHHHHHHH-hcC---CCccCCCCccccCChHHHHHHHHhhCCC----------------ccCCcCcccc
Q psy3492           1 MPRLQVLISYNWCLKRHLN-THI---KPFNCALCEYKAARPERLATHVIKVHNK----------------RICSKCSFLA   60 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~-~h~---~~~~c~~c~~~f~~~~~l~~h~~~~h~~----------------~~C~~c~~~f   60 (85)
                      |+.|.+.+.....|+.|++ .|.   ..|.|..|..+|.+...|.+|+ ..|..                |+|.+|||+|
T Consensus       213 cpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFKCtECgKAF  291 (1007)
T KOG3623|consen  213 CPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFKCTECGKAF  291 (1007)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhccccccccchhh
Confidence            5667777777777777776 343   5577777877888877777777 55531                7777888888


Q ss_pred             CCHHHHHHHHhhcc---cccCcC
Q psy3492          61 DDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        61 ~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      ...-.|+.|+|+|.   ||+|+-
T Consensus       292 KfKHHLKEHlRIHSGEKPfeCpn  314 (1007)
T KOG3623|consen  292 KFKHHLKEHLRIHSGEKPFECPN  314 (1007)
T ss_pred             hhHHHHHhhheeecCCCCcCCcc
Confidence            88877888888777   777753

>KOG3608|consensus

Probab=99.44  E-value=1.4e-13  Score=79.88  Aligned_cols=83  Identities=24%  Similarity=0.486  Sum_probs=60.5

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc--c
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI--F   75 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~--~   75 (85)
                      |..|.|.|.....|..|+..|..-|+|..|+.+...+++|..|++..|..   |+|+.|.+.+.+.+.|.+|..+|+  .
T Consensus       240 C~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~  319 (467)
T KOG3608|consen  240 CAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTV  319 (467)
T ss_pred             HHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccc
Confidence            44567777777777777777666677777777777777777777544554   778888888888888888887777  6


Q ss_pred             ccCcCCCC
Q psy3492          76 WECSFQDA   83 (85)
Q Consensus        76 ~~C~~~~~   83 (85)
                      |+|+++++
T Consensus       320 y~C~h~~C  327 (467)
T KOG3608|consen  320 YQCEHPDC  327 (467)
T ss_pred             eecCCCCC
Confidence            77776543

>KOG1074|consensus

Probab=99.44  E-value=1.2e-14  Score=91.04  Aligned_cols=73  Identities=26%  Similarity=0.467  Sum_probs=68.7

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC-------ccCC---cCccccCCHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK-------RICS---KCSFLADDQETLNE   68 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~-------~~C~---~c~~~f~~~~~l~~   68 (85)
                      |-.|.++.+..+.|+.|.++|+  +||+|.+||++|..+.+|+.|+ .+|..       +.|+   +|-+.|.+.-.|..
T Consensus       608 CiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQ  686 (958)
T KOG1074|consen  608 CIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQ  686 (958)
T ss_pred             eeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhcccccccccccc
Confidence            5679999999999999999999  9999999999999999999999 78875       8899   99999999999999


Q ss_pred             HHhhcc
Q psy3492          69 HLQQHI   74 (85)
Q Consensus        69 h~~~h~   74 (85)
                      |+++|.
T Consensus       687 hIriH~  692 (958)
T KOG1074|consen  687 HIRIHL  692 (958)
T ss_pred             eEEeec
Confidence            999998

>PHA02768 hypothetical protein; Provisional

Probab=99.37  E-value=3.4e-13  Score=59.21  Aligned_cols=40  Identities=20%  Similarity=0.449  Sum_probs=23.1

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHHH
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQET   65 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~~   65 (85)
                      |+|+.||+.|...+.|..|+ +.|.. ++|..|++.|...+.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~-r~H~k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHL-RKHNTNLKLSNCKRISLRTGE   46 (55)
T ss_pred             cCcchhCCeeccHHHHHHHH-HhcCCcccCCcccceecccce
Confidence            45666666666666666665 45553 666666666555443

>PHA00733 hypothetical protein

Probab=99.32  E-value=5.3e-12  Score=65.00  Aligned_cols=71  Identities=18%  Similarity=0.415  Sum_probs=55.5

Q ss_pred             CCCcccccChHHHHH------HHHhcC-CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHHHHHHHHhhc
Q psy3492           2 PRLQVLISYNWCLKR------HLNTHI-KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~------h~~~h~-~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      .+|.+.|.....|..      ++..+. +||.|..|++.|.....|..|+ ..+.. |.|+.|++.|.....|..|+...
T Consensus        44 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h~~~~~C~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733         44 AVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHI-RYTEHSKVCPVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             HHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHH-hcCCcCccCCCCCCccCCHHHHHHHHHHh
Confidence            345555555544443      333444 8999999999999999999998 66655 99999999999999999998754

>KOG3608|consensus

Probab=99.26  E-value=1.2e-11  Score=72.07  Aligned_cols=81  Identities=28%  Similarity=0.577  Sum_probs=70.9

Q ss_pred             CCCCcccccChHHHHHHHHh-cC--CCccCCCCccccCChHHHHHHHHhhCCC--ccCCc--CccccCCHHHHHHHHhhc
Q psy3492           1 MPRLQVLISYNWCLKRHLNT-HI--KPFNCALCEYKAARPERLATHVIKVHNK--RICSK--CSFLADDQETLNEHLQQH   73 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~-h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~--~~C~~--c~~~f~~~~~l~~h~~~h   73 (85)
                      ||.|..+....++|..|++. |+  +||+|+.|++.+...+.|.+|+ ..|+.  |.|+.  |..++.....+.+|.+.+
T Consensus       266 CplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~-~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~ev  344 (467)
T KOG3608|consen  266 CPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHV-QVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEV  344 (467)
T ss_pred             ccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHH-HhccccceecCCCCCcHHHHHHHHHHHHHHHh
Confidence            78899999999999999994 66  9999999999999999999999 68988  99976  999999999999998854


Q ss_pred             c------cccCcCCC
Q psy3492          74 I------FWECSFQD   82 (85)
Q Consensus        74 ~------~~~C~~~~   82 (85)
                      .      +|.|.+.+
T Consensus       345 hEg~np~~Y~CH~Cd  359 (467)
T KOG3608|consen  345 HEGNNPILYACHCCD  359 (467)
T ss_pred             ccCCCCCceeeecch
Confidence            4      67776543

>PHA02768 hypothetical protein; Provisional

Probab=99.16  E-value=1.8e-11  Score=53.80  Aligned_cols=40  Identities=15%  Similarity=0.175  Sum_probs=34.1

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERL   40 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l   40 (85)
                      |++||+.|....+|..|+++|.++++|..|++.|...+.|
T Consensus         8 C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          8 CPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cchhCCeeccHHHHHHHHHhcCCcccCCcccceeccccee
Confidence            7889999999999999998888888888888888877655

>KOG1074|consensus

Probab=99.04  E-value=1.1e-10  Score=73.97  Aligned_cols=49  Identities=29%  Similarity=0.381  Sum_probs=37.1

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |.+||+.|...+.|++|+++|+  |||.|.+|+++|..+.+|+.|+ ..|-.
T Consensus       882 C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHM-gtH~w  932 (958)
T KOG1074|consen  882 CNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHM-GTHMW  932 (958)
T ss_pred             hccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhh-ccccc
Confidence            5677777777777777777777  7777777777777777777777 56653

>PHA00732 hypothetical protein

Probab=98.96  E-value=9.2e-10  Score=52.27  Aligned_cols=47  Identities=23%  Similarity=0.505  Sum_probs=26.4

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCCccCCcCccccCCHHHHHHHHhhc
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      ||.|..|++.|.....|..|++..|.++.|+.||+.|.+   +..|.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~~---l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYRR---LNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeCC---hhhhhccc
Confidence            455666666666666666665213444666666666652   44555443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.95  E-value=4.2e-09  Score=65.25  Aligned_cols=77  Identities=14%  Similarity=0.263  Sum_probs=60.5

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCC----------HHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADD----------QETLN   67 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~----------~~~l~   67 (85)
                      |+.|++.|. ...|..|+.++.+|+.|. ||+.+ .+..|..|+ ..+-+   +.|+.|++.+..          .+.|.
T Consensus       456 C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt  531 (567)
T PLN03086        456 CEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQ-ASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMS  531 (567)
T ss_pred             CCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhh-hccCCCCceeCCCCCCccccCccccchhhhhhhHH
Confidence            788999986 678999999877889999 99755 668899998 67766   889999998852          35788


Q ss_pred             HHHhhcc--cccCcCC
Q psy3492          68 EHLQQHI--FWECSFQ   81 (85)
Q Consensus        68 ~h~~~h~--~~~C~~~   81 (85)
                      .|..+..  ++.|...
T Consensus       532 ~HE~~CG~rt~~C~~C  547 (567)
T PLN03086        532 EHESICGSRTAPCDSC  547 (567)
T ss_pred             HHHHhcCCcceEcccc
Confidence            8888766  6667543

>PHA00733 hypothetical protein

Probab=98.91  E-value=4.5e-09  Score=54.22  Aligned_cols=48  Identities=23%  Similarity=0.317  Sum_probs=43.1

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      |++|++.|.....|..|++.+..++.|.+|+++|.....|..|+...|
T Consensus        76 C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         76 CPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            789999999999999999976677999999999999999999985444

>KOG3993|consensus

Probab=98.80  E-value=2.9e-09  Score=63.49  Aligned_cols=73  Identities=16%  Similarity=0.154  Sum_probs=48.3

Q ss_pred             CCCCcccccChHHHHHHHHhcC-CCccCCCCcc----ccCChHHHHHHHHhh----CCC-ccCCcCccccCCHHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI-KPFNCALCEY----KAARPERLATHVIKV----HNK-RICSKCSFLADDQETLNEHL   70 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~-~~~~c~~c~~----~f~~~~~l~~h~~~~----h~~-~~C~~c~~~f~~~~~l~~h~   70 (85)
                      ||+|+|.|+...+|.+|.++|. ++-.-.--+.    ........+.-. +.    -.| |.|..|+|.|.+..-|++|+
T Consensus       298 CPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~-rsg~dss~gi~~C~~C~KkFrRqAYLrKHq  376 (500)
T KOG3993|consen  298 CPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE-RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQ  376 (500)
T ss_pred             CCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc-ccCCcccCceeecHHhhhhhHHHHHHHHhH
Confidence            8999999999999999999997 4432210000    111111111111 11    112 99999999999999999999


Q ss_pred             hhcc
Q psy3492          71 QQHI   74 (85)
Q Consensus        71 ~~h~   74 (85)
                      -+|.
T Consensus       377 lthq  380 (500)
T KOG3993|consen  377 LTHQ  380 (500)
T ss_pred             Hhhh
Confidence            8887

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.80  E-value=4.5e-09  Score=39.82  Aligned_cols=23  Identities=39%  Similarity=0.907  Sum_probs=18.5

Q ss_pred             HHHHHHHhcC--CCccCCCCccccC
Q psy3492          13 CLKRHLNTHI--KPFNCALCEYKAA   35 (85)
Q Consensus        13 ~l~~h~~~h~--~~~~c~~c~~~f~   35 (85)
                      +|..|+++|+  +||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4778888888  8888888888875

...

>PHA00732 hypothetical protein

Probab=98.61  E-value=6.3e-08  Score=46.02  Aligned_cols=46  Identities=20%  Similarity=0.292  Sum_probs=38.0

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|+.|++.+..++.|..|++.|..   +..|+ ....+
T Consensus         4 C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~~---l~~H~-~~~~~   49 (79)
T PHA00732          4 CPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYRR---LNQHF-YSQYD   49 (79)
T ss_pred             CCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeCC---hhhhh-cccCC
Confidence            789999999999999999853335689999999984   77787 56655

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.61  E-value=2.3e-08  Score=36.67  Aligned_cols=23  Identities=22%  Similarity=0.527  Sum_probs=16.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            46777777777777777777653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=98.57  E-value=2.7e-08  Score=41.87  Aligned_cols=24  Identities=21%  Similarity=0.354  Sum_probs=14.1

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |+|+.||+.|.+.+.|..|++.|+
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~h   25 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVH   25 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhc
Confidence            455566666666666666665555

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.49  E-value=3.6e-07  Score=56.97  Aligned_cols=67  Identities=16%  Similarity=0.311  Sum_probs=53.9

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccC----------ChHHHHHHHHhhCCC--ccCCcCccccCCHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAA----------RPERLATHVIKVHNK--RICSKCSFLADDQETL   66 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~----------~~~~l~~h~~~~h~~--~~C~~c~~~f~~~~~l   66 (85)
                      |+ ||+.+ ....|..|+.+|.  +++.|..|+..+.          ....|..|+ .....  +.|..||+.+.... +
T Consensus       481 Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE-~~CG~rt~~C~~Cgk~Vrlrd-m  556 (567)
T PLN03086        481 CP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHE-SICGSRTAPCDSCGRSVMLKE-M  556 (567)
T ss_pred             CC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHH-HhcCCcceEccccCCeeeehh-H
Confidence            77 99755 6789999998888  9999999999884          235789998 56544  89999999988874 6


Q ss_pred             HHHHh
Q psy3492          67 NEHLQ   71 (85)
Q Consensus        67 ~~h~~   71 (85)
                      ..|+.
T Consensus       557 ~~H~~  561 (567)
T PLN03086        557 DIHQI  561 (567)
T ss_pred             HHHHH
Confidence            67765

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.36  E-value=2e-07  Score=35.22  Aligned_cols=23  Identities=22%  Similarity=0.465  Sum_probs=19.6

Q ss_pred             HHHHHHHhhCCC---ccCCcCccccCC
Q psy3492          39 RLATHVIKVHNK---RICSKCSFLADD   62 (85)
Q Consensus        39 ~l~~h~~~~h~~---~~C~~c~~~f~~   62 (85)
                      +|..|+ +.|+|   |.|+.|++.|.+
T Consensus         1 ~l~~H~-~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHM-RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHH-HHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHh-hhcCCCCCCCCCCCcCeeCc
Confidence            478899 68998   999999999864

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.29  E-value=6.2e-07  Score=32.81  Aligned_cols=23  Identities=22%  Similarity=0.479  Sum_probs=14.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|+.|++.|.+...|..|++++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            46777777777777777777654

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.28  E-value=5.5e-07  Score=32.87  Aligned_cols=21  Identities=33%  Similarity=0.347  Sum_probs=14.6

Q ss_pred             CCCCcccccChHHHHHHHHhc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTH   21 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h   21 (85)
                      |+.|++.|.....|..|++.|
T Consensus         3 C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    3 CPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             ETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHhHC
Confidence            567777777777777776653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=98.27  E-value=4.6e-07  Score=38.18  Aligned_cols=26  Identities=15%  Similarity=0.321  Sum_probs=15.9

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      ||.|..||+.|..++.|..|+ +.|.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~-r~~hg   26 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHL-LSVHK   26 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHH-HHhcC
Confidence            456666666666666666666 34444

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.21  E-value=5.2e-06  Score=36.69  Aligned_cols=46  Identities=26%  Similarity=0.533  Sum_probs=27.4

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC----ccCCcCccccCCHHHHHHHHhh
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK----RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~----~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      .|.|..|++ ......|..|....|..    +.||.|...+.  ..|..|+..
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            356777777 34455677776445554    66777766433  356666654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.06  E-value=1.9e-05  Score=34.89  Aligned_cols=43  Identities=21%  Similarity=0.311  Sum_probs=33.7

Q ss_pred             CCCCcccccChHHHHHHHH-hcC---CCccCCCCccccCChHHHHHHHHh
Q psy3492           1 MPRLQVLISYNWCLKRHLN-THI---KPFNCALCEYKAARPERLATHVIK   46 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~-~h~---~~~~c~~c~~~f~~~~~l~~h~~~   46 (85)
                      ||.|++ ..+...|..|.. .|.   +.+.|.+|...+.  .+|..|+..
T Consensus         5 CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    5 CPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             CCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            899999 566788999977 455   7799999998644  488888843

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.06  E-value=3.1e-06  Score=41.50  Aligned_cols=71  Identities=20%  Similarity=0.149  Sum_probs=21.3

Q ss_pred             CCCCcccccChHHHHHHHH-hcCCCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           1 MPRLQVLISYNWCLKRHLN-THIKPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~-~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |..|+..|.....|..|+. .|.....   ....+.....+..++...-.. +.|..|++.|.....|..|++.+.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             --------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccccccccccc---cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            7789999999999999987 4541111   011122333333333111122 899999999999999999999653

>smart00355 ZnF_C2H2 zinc finger

Probab=98.05  E-value=6e-06  Score=30.49  Aligned_cols=23  Identities=26%  Similarity=0.652  Sum_probs=16.9

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|+.|++.|...+.|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            46777777777777777777654

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.03  E-value=3.2e-06  Score=32.00  Aligned_cols=22  Identities=27%  Similarity=0.534  Sum_probs=11.9

Q ss_pred             cCCcCccccCCHHHHHHHHhhc
Q psy3492          52 ICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        52 ~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      .|..|++.|.....|..|++.|
T Consensus         3 ~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    3 ECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCccCCccCChhHHHHHhHHh
Confidence            4555555555555555555543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.91  E-value=1.1e-05  Score=30.51  Aligned_cols=24  Identities=29%  Similarity=0.609  Sum_probs=20.5

Q ss_pred             CccCCCCccccCChHHHHHHHHhhC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      ||+|..|++.|.....|..|+ +.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~-~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHK-RSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHH-CTT
T ss_pred             CCCCCccCCccCChhHHHHHh-HHh
Confidence            578999999999999999998 554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.87  E-value=1.5e-05  Score=28.89  Aligned_cols=21  Identities=24%  Similarity=0.274  Sum_probs=13.3

Q ss_pred             CCCCcccccChHHHHHHHHhc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTH   21 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h   21 (85)
                      |+.|++.|.....|..|+..|
T Consensus         3 C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    3 CPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             -SSTS-EESSHHHHHHHHHHH
T ss_pred             CcCCCCcCCcHHHHHHHHHhh
Confidence            567777777777777776654

...

>smart00355 ZnF_C2H2 zinc finger

Probab=97.59  E-value=8.9e-05  Score=27.14  Aligned_cols=21  Identities=29%  Similarity=0.431  Sum_probs=13.5

Q ss_pred             CCCCcccccChHHHHHHHHhc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTH   21 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h   21 (85)
                      |+.|++.|.....|..|+..|
T Consensus         3 C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        3 CPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCcchhCCHHHHHHHHHHh
Confidence            556666666666666666544

>KOG3993|consensus

Probab=97.50  E-value=1.9e-05  Score=47.82  Aligned_cols=50  Identities=28%  Similarity=0.433  Sum_probs=41.6

Q ss_pred             ccCCCCccccCChHHHHHHHH--hhCCCccCCcCccccCCHHHHHHHHhhcc
Q psy3492          25 FNCALCEYKAARPERLATHVI--KVHNKRICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~--~~h~~~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|..|...|...-.|.+|..  .+|..|+|++|+|.|+-+.+|..|.|.|-
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccC
Confidence            778889888888888888852  12223999999999999999999999987

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.46  E-value=7.8e-05  Score=27.51  Aligned_cols=21  Identities=24%  Similarity=0.529  Sum_probs=12.4

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |.|..|++.|.+...+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345566666666666666654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=97.35  E-value=0.00027  Score=26.27  Aligned_cols=20  Identities=20%  Similarity=0.416  Sum_probs=13.7

Q ss_pred             cCCcCccccCCHHHHHHHHhh
Q psy3492          52 ICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        52 ~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      .|+.||+.| .++.|..|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            577777777 55567777653

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.24  E-value=5.9e-05  Score=44.34  Aligned_cols=49  Identities=27%  Similarity=0.537  Sum_probs=39.7

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCC--------------------C-ccCCcCccccCCHHHHHHHHh
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHN--------------------K-RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~--------------------~-~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |||+|.+  |++.+.....|+-|+..-|.                    . |+|+.|+|.+.+...|+.|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            8999987  99999998888888743331                    1 899999999999999988854

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.14  E-value=0.0004  Score=25.34  Aligned_cols=22  Identities=32%  Similarity=0.800  Sum_probs=14.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |+|+.|+.... ...|..|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            56788887777 77788887764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.02  E-value=0.00023  Score=26.83  Aligned_cols=21  Identities=19%  Similarity=0.548  Sum_probs=14.4

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |-|..|++.|.+...+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456777777777777766655

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.02  E-value=0.00054  Score=25.15  Aligned_cols=20  Identities=25%  Similarity=0.667  Sum_probs=15.3

Q ss_pred             ccCCCCccccCChHHHHHHH
Q psy3492          25 FNCALCEYKAARPERLATHV   44 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~   44 (85)
                      |.|.+|+..|.....+..|+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHH
Confidence            45777888888888887776

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.98  E-value=0.00089  Score=29.06  Aligned_cols=20  Identities=30%  Similarity=0.418  Sum_probs=13.3

Q ss_pred             CCCCcccccChHHHHHHHHh
Q psy3492           1 MPRLQVLISYNWCLKRHLNT   20 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~   20 (85)
                      ||+|+..+.+..+|.+|+..
T Consensus        27 CP~C~a~~~~srnLrRHle~   46 (54)
T PF09237_consen   27 CPICGAVIRQSRNLRRHLEI   46 (54)
T ss_dssp             -TTT--EESSHHHHHHHHHH
T ss_pred             CCcchhhccchhhHHHHHHH
Confidence            77888888888888888764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.45  E-value=0.004  Score=27.07  Aligned_cols=26  Identities=23%  Similarity=0.515  Sum_probs=15.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      .|..|.+|+..+.+..+|.+|++..|
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHh
Confidence            67778888888888888887774444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.34  E-value=0.0024  Score=34.36  Aligned_cols=34  Identities=21%  Similarity=0.471  Sum_probs=20.7

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADD   62 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~   62 (85)
                      +|.|. |+.   ....+..|. +++++   |.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~-ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHN-RVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHH-HHhcCCccEECCCCCceeEE
Confidence            36665 665   444566666 56665   777777766544

>PRK04860 hypothetical protein; Provisional

Probab=95.85  E-value=0.0075  Score=32.53  Aligned_cols=33  Identities=15%  Similarity=0.187  Sum_probs=26.5

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCCh
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARP   37 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~   37 (85)
                      |. |++   ....+.+|.++|.  ++|.|..|+..|...
T Consensus       122 C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        122 CK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             cC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            44 665   5677899999998  889999999887654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.73  E-value=0.011  Score=23.30  Aligned_cols=21  Identities=24%  Similarity=0.539  Sum_probs=13.8

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |.|+.|++.|.....+..|+.
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             eEccccCCccCCHHHHHHHHC
Confidence            556677777776666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.38  E-value=0.0037  Score=37.13  Aligned_cols=43  Identities=23%  Similarity=0.363  Sum_probs=35.7

Q ss_pred             CCCcccccChHHHHHHHH-hc-----------------C---CCccCCCCccccCChHHHHHHH
Q psy3492           2 PRLQVLISYNWCLKRHLN-TH-----------------I---KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~h~~-~h-----------------~---~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +.|.|+++..-.|+-|+. -|                 .   |||+|.+|++.+.....|+-|.
T Consensus       355 ~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         355 EGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            358999999999998876 34                 1   8999999999999988888774

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.28  E-value=0.049  Score=26.36  Aligned_cols=21  Identities=14%  Similarity=0.218  Sum_probs=15.4

Q ss_pred             CCCCcccccChHHHHHHHHhc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTH   21 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h   21 (85)
                      |..|++.|.+...|..|+..+
T Consensus        53 C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   53 CPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             BSSSS-EESSHHHHHHHHHHT
T ss_pred             CCccCCCCcCHHHHHHHHcCc
Confidence            677888888888888888754

>KOG2186|consensus

Probab=94.12  E-value=0.031  Score=32.23  Aligned_cols=37  Identities=22%  Similarity=0.605  Sum_probs=16.1

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      |.|.+||....-+ .+.+|+.+.+.. |.|..||+.|-.
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn~~fSCIDC~k~F~~   41 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRNAYFSCIDCGKTFER   41 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccCCeeEEeeccccccc
Confidence            3455555443333 234454222222 555555555544

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=93.82  E-value=0.026  Score=27.31  Aligned_cols=32  Identities=19%  Similarity=0.392  Sum_probs=24.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCH
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQ   63 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~   63 (85)
                      .++.|..|++.        .+. +..+| |.|..||..|+-.
T Consensus        34 ~~~~Cp~C~~~--------~Vk-R~a~GIW~C~kCg~~fAGg   66 (89)
T COG1997          34 AKHVCPFCGRT--------TVK-RIATGIWKCRKCGAKFAGG   66 (89)
T ss_pred             cCCcCCCCCCc--------cee-eeccCeEEcCCCCCeeccc
Confidence            67899999865        233 67778 9999999988754

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=93.69  E-value=0.0065  Score=34.20  Aligned_cols=13  Identities=23%  Similarity=0.823  Sum_probs=10.5

Q ss_pred             ccCCcCccccCCH
Q psy3492          51 RICSKCSFLADDQ   63 (85)
Q Consensus        51 ~~C~~c~~~f~~~   63 (85)
                      ..||.||.++...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5799999887755

>TIGR00622 ssl1 transcription factor ssl1

Probab=93.49  E-value=0.11  Score=26.47  Aligned_cols=72  Identities=18%  Similarity=0.236  Sum_probs=44.8

Q ss_pred             CCCCcccccChHHHHHHHHhcC---CCc------------cCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI---KPF------------NCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQE   64 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~---~~~------------~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~   64 (85)
                      ||+||-.......|.+.. -|.   ++|            .|-.|...|........-. ..-.+ |+|+.|...|-..-
T Consensus        18 CpiCgLtLVss~HLARSy-HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~~-~~~~~~y~C~~C~~~FC~dC   95 (112)
T TIGR00622        18 CPICGLTLILSTHLARSY-HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFDE-LKDSHRYVCAVCKNVFCVDC   95 (112)
T ss_pred             CCcCCCEEeccchHHHhh-hccCCCcccccccccccCCCCcccCcCCCCCCcccccccc-cccccceeCCCCCCcccccc
Confidence            678887777777776542 122   333            2666777776543211111 11122 99999999999888


Q ss_pred             HHHHHHhhcc
Q psy3492          65 TLNEHLQQHI   74 (85)
Q Consensus        65 ~l~~h~~~h~   74 (85)
                      +.-.|-..|.
T Consensus        96 D~fiHe~Lh~  105 (112)
T TIGR00622        96 DVFVHESLHC  105 (112)
T ss_pred             chhhhhhccC
Confidence            8888877776

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2231|consensus

Probab=93.12  E-value=0.4  Score=31.62  Aligned_cols=72  Identities=25%  Similarity=0.360  Sum_probs=43.0

Q ss_pred             ccChHHHHHHHH-hcCCCccCCCCc---------cccCChHHHHHHHHhhCC------C-ccCCcCccccCCHHHHHHHH
Q psy3492           8 ISYNWCLKRHLN-THIKPFNCALCE---------YKAARPERLATHVIKVHN------K-RICSKCSFLADDQETLNEHL   70 (85)
Q Consensus         8 f~~~~~l~~h~~-~h~~~~~c~~c~---------~~f~~~~~l~~h~~~~h~------~-~~C~~c~~~f~~~~~l~~h~   70 (85)
                      |.....|+.|+. .| +-+.|..|-         ...-....|..|+.....      | -.|+.|...|.....|..|+
T Consensus       124 ~~s~~~Lk~H~~~~H-~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~  202 (669)
T KOG2231|consen  124 FKSVENLKNHMRDQH-KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHL  202 (669)
T ss_pred             hhHHHHHHHHHHHhh-hhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhh
Confidence            346788889985 44 333333332         122334566777622222      2 46788888899999999998


Q ss_pred             hhcc--cccCcC
Q psy3492          71 QQHI--FWECSF   80 (85)
Q Consensus        71 ~~h~--~~~C~~   80 (85)
                      +.+.  ..-|+.
T Consensus       203 ~~~h~~chfC~~  214 (669)
T KOG2231|consen  203 RFDHEFCHFCDY  214 (669)
T ss_pred             ccceeheeecCc
Confidence            8654  444543

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=92.63  E-value=0.18  Score=18.71  Aligned_cols=19  Identities=26%  Similarity=0.517  Sum_probs=12.8

Q ss_pred             cCCcCccccCCHHHHHHHHh
Q psy3492          52 ICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        52 ~C~~c~~~f~~~~~l~~h~~   71 (85)
                      .||.|++.+ ....++.|++
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            577777776 4456677765

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>KOG1146|consensus

Probab=92.19  E-value=0.11  Score=36.44  Aligned_cols=44  Identities=25%  Similarity=0.545  Sum_probs=34.5

Q ss_pred             CCCCcccccChHHHHHHHHh-cC--------------------------CCccCCCCccccCChHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNT-HI--------------------------KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~-h~--------------------------~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||.|+..|+....|..||+. |.                          +||.|..|...+..+.+|..|+
T Consensus       468 cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihl  538 (1406)
T KOG1146|consen  468 CPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHL  538 (1406)
T ss_pred             CCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHH
Confidence            78999999999999999997 11                          4567777777777777777666

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=91.97  E-value=0.15  Score=22.91  Aligned_cols=32  Identities=22%  Similarity=0.421  Sum_probs=16.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSF   58 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~   58 (85)
                      ..|.|..||+.....-.--    +.+.. |.|+.||.
T Consensus        26 v~F~CPnCGe~~I~Rc~~C----Rk~g~~Y~Cp~CGF   58 (61)
T COG2888          26 VKFPCPNCGEVEIYRCAKC----RKLGNPYRCPKCGF   58 (61)
T ss_pred             eEeeCCCCCceeeehhhhH----HHcCCceECCCcCc
Confidence            3466777776555543321    12222 77777764

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.45  E-value=0.11  Score=23.03  Aligned_cols=19  Identities=26%  Similarity=0.336  Sum_probs=15.8

Q ss_pred             CCCCcccccChHHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLN   19 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~   19 (85)
                      ||.||..|.....+.+|..
T Consensus        20 CPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          20 CPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             CCchhHHHHHhHHHHHHhh
Confidence            7888888888888888876

>smart00531 TFIIE Transcription initiation factor IIE

Probab=91.08  E-value=0.12  Score=27.49  Aligned_cols=35  Identities=17%  Similarity=0.293  Sum_probs=23.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCcccc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLA   60 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f   60 (85)
                      .-|.|+.|+..|.....+.. .  ...+ |.|+.||...
T Consensus        98 ~~Y~Cp~C~~~y~~~ea~~~-~--d~~~~f~Cp~Cg~~l  133 (147)
T smart00531       98 AYYKCPNCQSKYTFLEANQL-L--DMDGTFTCPRCGEEL  133 (147)
T ss_pred             cEEECcCCCCEeeHHHHHHh-c--CCCCcEECCCCCCEE
Confidence            56889999988886544321 1  2245 9999998755

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.02  E-value=0.28  Score=24.65  Aligned_cols=24  Identities=17%  Similarity=0.639  Sum_probs=21.6

Q ss_pred             CccC----CcCccccCCHHHHHHHHhhc
Q psy3492          50 KRIC----SKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        50 ~~~C----~~c~~~f~~~~~l~~h~~~h   73 (85)
                      ||.|    ..|+....+...+.+|++.+
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~  107 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKE  107 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHh
Confidence            4899    99999999999999999854

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=90.89  E-value=0.18  Score=19.75  Aligned_cols=11  Identities=27%  Similarity=0.920  Sum_probs=6.1

Q ss_pred             ccCCCCccccC
Q psy3492          25 FNCALCEYKAA   35 (85)
Q Consensus        25 ~~c~~c~~~f~   35 (85)
                      +.|.+||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            45666665543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=89.71  E-value=0.24  Score=19.91  Aligned_cols=33  Identities=15%  Similarity=0.323  Sum_probs=18.6

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccC
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLAD   61 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~   61 (85)
                      +.|..|+..|.-.....    ....+ ..|+.||..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~----~~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL----GANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc----CCCCCEEECCCCCCEEE
Confidence            46777777766655421    11112 67777776653

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=89.64  E-value=0.41  Score=19.22  Aligned_cols=31  Identities=23%  Similarity=0.417  Sum_probs=19.2

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC--ccCCcCcccc
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK--RICSKCSFLA   60 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~--~~C~~c~~~f   60 (85)
                      ..|..|+..|.-....     ....|  .+|+.||..|
T Consensus         3 i~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            4577777777766542     12223  7788887765

>KOG1146|consensus

Probab=89.45  E-value=0.15  Score=35.89  Aligned_cols=65  Identities=22%  Similarity=0.438  Sum_probs=46.9

Q ss_pred             ccChHHHHHHHH-hcC--CCccCCCCccccCChHHHHHHHHhhCC------------------C---------ccCCcCc
Q psy3492           8 ISYNWCLKRHLN-THI--KPFNCALCEYKAARPERLATHVIKVHN------------------K---------RICSKCS   57 (85)
Q Consensus         8 f~~~~~l~~h~~-~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~------------------~---------~~C~~c~   57 (85)
                      +.....+..++. .++  +.+.|..|+..|.+...|..|++..|-                  |         |.|..|.
T Consensus       446 ~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~  525 (1406)
T KOG1146|consen  446 LESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACN  525 (1406)
T ss_pred             hhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeee
Confidence            333444444443 344  889999999999999999999943111                  1         6788899


Q ss_pred             cccCCHHHHHHHHhh
Q psy3492          58 FLADDQETLNEHLQQ   72 (85)
Q Consensus        58 ~~f~~~~~l~~h~~~   72 (85)
                      .++.....|.+|+..
T Consensus       526 ~stttng~LsihlqS  540 (1406)
T KOG1146|consen  526 YSTTTNGNLSIHLQS  540 (1406)
T ss_pred             eeeecchHHHHHHHH
Confidence            999998899999873

>smart00614 ZnF_BED BED zinc finger

Probab=88.96  E-value=0.33  Score=20.83  Aligned_cols=21  Identities=24%  Similarity=0.468  Sum_probs=13.1

Q ss_pred             ccCCcCccccCCH-----HHHHHHHh
Q psy3492          51 RICSKCSFLADDQ-----ETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~-----~~l~~h~~   71 (85)
                      -.|..|++.+...     +.|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            3566777665444     56777766

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=88.33  E-value=0.29  Score=18.24  Aligned_cols=10  Identities=20%  Similarity=0.896  Sum_probs=6.5

Q ss_pred             cCCcCccccC
Q psy3492          52 ICSKCSFLAD   61 (85)
Q Consensus        52 ~C~~c~~~f~   61 (85)
                      .|+.||..|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            5677776664

Several members are annotated as putative helicases.

>COG5151 SSL1 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]

Probab=88.04  E-value=0.31  Score=29.30  Aligned_cols=53  Identities=15%  Similarity=0.258  Sum_probs=34.4

Q ss_pred             CCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHHHHHHHHhhcccccCcC
Q psy3492          27 CALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQETLNEHLQQHIFWECSF   80 (85)
Q Consensus        27 c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~~l~~h~~~h~~~~C~~   80 (85)
                      |-.|-..|..+..-..-. ....+ |+|+.|...|-..-..-.|-..|..+-|+.
T Consensus       365 Cf~CQ~~fp~~~~~~~~~-~~ss~rY~Ce~CK~~FC~dCdvfiHe~Lh~C~gCe~  418 (421)
T COG5151         365 CFVCQGPFPKPPVSPFDE-STSSGRYQCELCKSTFCSDCDVFIHETLHFCIGCEL  418 (421)
T ss_pred             ceeccCCCCCCCCCcccc-cccccceechhhhhhhhhhhHHHHHHHHhhCCCCcC
Confidence            555555555543322222 22233 999999999999988888888887666654

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=87.82  E-value=0.42  Score=27.20  Aligned_cols=22  Identities=23%  Similarity=0.427  Sum_probs=18.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhh
Q psy3492          51 RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |.|+.|+|.|.......+|+..
T Consensus        78 ~~C~lc~KlFkg~eFV~KHI~n   99 (214)
T PF04959_consen   78 WRCPLCGKLFKGPEFVRKHIFN   99 (214)
T ss_dssp             EEE-SSS-EESSHHHHHHHHHH
T ss_pred             ECCCCCCcccCChHHHHHHHhh
Confidence            8999999999999999999874

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>cd00730 rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center

Probab=87.66  E-value=0.2  Score=21.75  Aligned_cols=13  Identities=23%  Similarity=0.846  Sum_probs=9.4

Q ss_pred             ccCCCCccccCCh
Q psy3492          25 FNCALCEYKAARP   37 (85)
Q Consensus        25 ~~c~~c~~~f~~~   37 (85)
                      |+|.+||..+...
T Consensus         2 y~C~~CgyiYd~~   14 (50)
T cd00730           2 YECRICGYIYDPA   14 (50)
T ss_pred             cCCCCCCeEECCC
Confidence            6788888777643

Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.

>KOG4167|consensus

Probab=87.55  E-value=0.096  Score=34.69  Aligned_cols=24  Identities=21%  Similarity=0.378  Sum_probs=22.6

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |-|.+|+|.|.-..+++.||++|.
T Consensus       793 FpCreC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  793 FPCRECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             eehHHHHHHHHHHhhhhHHHHHHH
Confidence            899999999999999999999986

>PF14353 CpXC: CpXC protein

Probab=87.21  E-value=0.63  Score=24.03  Aligned_cols=13  Identities=15%  Similarity=0.335  Sum_probs=8.7

Q ss_pred             ccCCcCccccCCH
Q psy3492          51 RICSKCSFLADDQ   63 (85)
Q Consensus        51 ~~C~~c~~~f~~~   63 (85)
                      +.|+.||..|.-.
T Consensus        39 ~~CP~Cg~~~~~~   51 (128)
T PF14353_consen   39 FTCPSCGHKFRLE   51 (128)
T ss_pred             EECCCCCCceecC
Confidence            6788887766543

>PTZ00255 60S ribosomal protein L37a; Provisional

Probab=87.12  E-value=0.16  Score=24.85  Aligned_cols=31  Identities=13%  Similarity=0.363  Sum_probs=22.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..|++.     .+    .+...| |.|..|++.|+-
T Consensus        35 a~y~CpfCgk~-----~v----kR~a~GIW~C~~C~~~~AG   66 (90)
T PTZ00255         35 AKYFCPFCGKH-----AV----KRQAVGIWRCKGCKKTVAG   66 (90)
T ss_pred             CCccCCCCCCC-----ce----eeeeeEEEEcCCCCCEEeC
Confidence            67899999854     22    245567 999999988765

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.77  E-value=1.5  Score=23.76  Aligned_cols=32  Identities=19%  Similarity=0.314  Sum_probs=21.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCCccCCcCccccC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLAD   61 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~~~C~~c~~~f~   61 (85)
                      .-|.|+.|+..|+....+.       .+|.|+.||....
T Consensus       108 ~~Y~Cp~c~~r~tf~eA~~-------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       108 MFFICPNMCVRFTFNEAME-------LNFTCPRCGAMLD  139 (158)
T ss_pred             CeEECCCCCcEeeHHHHHH-------cCCcCCCCCCEee
Confidence            5577888887777665543       2388888886543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.68  E-value=0.48  Score=24.04  Aligned_cols=12  Identities=25%  Similarity=0.642  Sum_probs=6.1

Q ss_pred             cCCcCccccCCH
Q psy3492          52 ICSKCSFLADDQ   63 (85)
Q Consensus        52 ~C~~c~~~f~~~   63 (85)
                      .|++||..|.-.
T Consensus        28 vCP~CG~~~~~~   39 (108)
T PF09538_consen   28 VCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCCCccCcc
Confidence            455555554433

The function of members of this family is unknown.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=86.66  E-value=0.61  Score=18.77  Aligned_cols=33  Identities=18%  Similarity=0.526  Sum_probs=18.2

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccC
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLAD   61 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~   61 (85)
                      ..|..|+..|.-...-   + ....+ .+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~---l-~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK---L-PAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHH---c-ccCCcEEECCCCCcEee
Confidence            3566777776665541   1 22222 67777776653

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=86.36  E-value=0.49  Score=21.28  Aligned_cols=9  Identities=33%  Similarity=0.707  Sum_probs=4.4

Q ss_pred             ccCCCCccc
Q psy3492          25 FNCALCEYK   33 (85)
Q Consensus        25 ~~c~~c~~~   33 (85)
                      |.|..||+.
T Consensus        26 F~CPnCG~~   34 (59)
T PRK14890         26 FLCPNCGEV   34 (59)
T ss_pred             eeCCCCCCe
Confidence            445555544

>TIGR00280 L37a ribosomal protein L37a

Probab=86.30  E-value=0.17  Score=24.76  Aligned_cols=32  Identities=19%  Similarity=0.437  Sum_probs=23.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCH
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQ   63 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~   63 (85)
                      ..|.|..|++.     .+    .+...| |.|..|++.|.--
T Consensus        34 a~y~CpfCgk~-----~v----kR~a~GIW~C~~C~~~~AGG   66 (91)
T TIGR00280        34 AKYVCPFCGKK-----TV----KRGSTGIWTCRKCGAKFAGG   66 (91)
T ss_pred             cCccCCCCCCC-----ce----EEEeeEEEEcCCCCCEEeCC
Confidence            67899999854     22    256667 9999999877643

This model finds eukaryotic ribosomal protein L37a and its archaeal orthologs. The nomeclature is tricky because eukaryotes have proteins called both L37 and L37a.

>KOG2482|consensus

Probab=86.13  E-value=2  Score=26.41  Aligned_cols=50  Identities=24%  Similarity=0.563  Sum_probs=36.0

Q ss_pred             CCccCCCCccccC-ChHHHHHHHHhhCC---C---------------------ccCCcCccccCCHHHHHHHHhh
Q psy3492          23 KPFNCALCEYKAA-RPERLATHVIKVHN---K---------------------RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        23 ~~~~c~~c~~~f~-~~~~l~~h~~~~h~---~---------------------~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      ....|..|...+. ..+.+..|+-..|.   |                     ++|-.|.+.|..+..|..||+-
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHh
Confidence            5567888876443 55566666533332   1                     6888999999999999999984

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=85.80  E-value=0.71  Score=25.49  Aligned_cols=33  Identities=18%  Similarity=0.424  Sum_probs=22.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCCccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~~~C~~c~~~f~~   62 (85)
                      .-|.|..|+..|+....+.       .+|.|+.||.....
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~-------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME-------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh-------cCCcCCCCCCCCee
Confidence            4578888887777665432       23889999865443

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.22  E-value=0.79  Score=18.96  Aligned_cols=20  Identities=25%  Similarity=0.504  Sum_probs=9.3

Q ss_pred             ccCCcCccccCCH----HHHHHHH
Q psy3492          51 RICSKCSFLADDQ----ETLNEHL   70 (85)
Q Consensus        51 ~~C~~c~~~f~~~----~~l~~h~   70 (85)
                      ..|..|++.+...    +.|..|+
T Consensus        17 a~C~~C~~~~~~~~~~ts~l~~HL   40 (45)
T PF02892_consen   17 AKCKYCGKVIKYSSGGTSNLKRHL   40 (45)
T ss_dssp             EEETTTTEE-----SSTHHHHHHH
T ss_pred             EEeCCCCeEEeeCCCcHHHHHHhh
Confidence            4566666555443    5566665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF01780 Ribosomal_L37ae: Ribosomal L37ae protein family; InterPro: IPR002674 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms

Probab=84.67  E-value=0.18  Score=24.66  Aligned_cols=31  Identities=19%  Similarity=0.514  Sum_probs=22.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..|++.-     +    .+...| |.|..|++.|+-
T Consensus        34 ~ky~Cp~Cgk~~-----v----kR~a~GIW~C~~C~~~~AG   65 (90)
T PF01780_consen   34 AKYTCPFCGKTS-----V----KRVATGIWKCKKCGKKFAG   65 (90)
T ss_dssp             S-BEESSSSSSE-----E----EEEETTEEEETTTTEEEE-
T ss_pred             CCCcCCCCCCce-----e----EEeeeEEeecCCCCCEEeC
Confidence            789999998762     1    256777 999999887753

The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This ribosomal protein is found in archaebacteria and eukaryotes []. Ribosomal protein L37 has a single zinc finger-like motif of the C2-C2 type [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 4A1E_Y 4A17_Y 4A1C_Y 4A1A_Y 3O58_g 3IZS_m 3O5H_g 1S1I_9 3IZR_m 1YSH_D ....

>KOG2893|consensus

Probab=84.64  E-value=0.17  Score=29.25  Aligned_cols=41  Identities=22%  Similarity=0.284  Sum_probs=24.8

Q ss_pred             CCCCccccCChHHHHHHHHhhCCCccCCcCccccCCHHHHHHH
Q psy3492          27 CALCEYKAARPERLATHVIKVHNKRICSKCSFLADDQETLNEH   69 (85)
Q Consensus        27 c~~c~~~f~~~~~l~~h~~~~h~~~~C~~c~~~f~~~~~l~~h   69 (85)
                      |=-|++.|....-|.+|+...|  |+|.+|-|.+-.-..|..|
T Consensus        13 cwycnrefddekiliqhqkakh--fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH--FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc--ceeeeehhhhccCCCceee
Confidence            4447777887777777763333  7787776544443344444

>COG1773 Rubredoxin [Energy production and conversion]

Probab=84.61  E-value=0.29  Score=21.69  Aligned_cols=33  Identities=15%  Similarity=0.517  Sum_probs=18.8

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC---------ccCCcCcc
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK---------RICSKCSF   58 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~---------~~C~~c~~   58 (85)
                      .++|.+||..|.-...-...  .+-.|         +.|+.||.
T Consensus         3 ~~~C~~CG~vYd~e~Gdp~~--gi~pgT~fedlPd~w~CP~Cg~   44 (55)
T COG1773           3 RWRCSVCGYVYDPEKGDPRC--GIAPGTPFEDLPDDWVCPECGV   44 (55)
T ss_pred             ceEecCCceEeccccCCccC--CCCCCCchhhCCCccCCCCCCC
Confidence            46788888776654322211  12222         78999873

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=84.36  E-value=0.47  Score=17.35  Aligned_cols=8  Identities=38%  Similarity=1.074  Sum_probs=5.5

Q ss_pred             ccCCcCcc
Q psy3492          51 RICSKCSF   58 (85)
Q Consensus        51 ~~C~~c~~   58 (85)
                      |.|+.||+
T Consensus        17 f~CPnCG~   24 (24)
T PF07754_consen   17 FPCPNCGF   24 (24)
T ss_pred             EeCCCCCC
Confidence            77777763

It is likely to bind zinc via its four well-conserved cysteine residues.

>PF13878 zf-C2H2_3: zinc-finger of acetyl-transferase ESCO

Probab=84.19  E-value=1.3  Score=18.26  Aligned_cols=21  Identities=29%  Similarity=0.127  Sum_probs=11.0

Q ss_pred             CCCCcccccCh--HHHHHHHHhc
Q psy3492           1 MPRLQVLISYN--WCLKRHLNTH   21 (85)
Q Consensus         1 c~~c~~~f~~~--~~l~~h~~~h   21 (85)
                      |++||..|...  ..-..|.+.|
T Consensus        16 C~~CgM~Y~~~~~eD~~~H~~yH   38 (41)
T PF13878_consen   16 CPTCGMLYSPGSPEDEKLHKKYH   38 (41)
T ss_pred             CCCCCCEECCCCHHHHHHHHHHH
Confidence            66777665433  4444554443

>PF00301 Rubredoxin: Rubredoxin; InterPro: IPR004039 Rubredoxin is a low molecular weight iron-containing bacterial protein involved in electron transfer [, ], sometimes replacing ferredoxin as an electron carrier []

Probab=83.88  E-value=0.13  Score=22.02  Aligned_cols=13  Identities=23%  Similarity=0.828  Sum_probs=8.6

Q ss_pred             ccCCCCccccCCh
Q psy3492          25 FNCALCEYKAARP   37 (85)
Q Consensus        25 ~~c~~c~~~f~~~   37 (85)
                      |+|.+|+..+...
T Consensus         2 y~C~~CgyvYd~~   14 (47)
T PF00301_consen    2 YQCPVCGYVYDPE   14 (47)
T ss_dssp             EEETTTSBEEETT
T ss_pred             cCCCCCCEEEcCC
Confidence            5677777666544

The 3-D structures of a number of rubredoxins have been solved [, ]. The fold belongs to the alpha+beta class, with 2 alpha-helices and 2-3 beta-strands. Its active site contains an iron ion which is co-ordinated by the sulphurs of four conserved cysteine residues forming an almost regular tetrahedron. The conserved cysteines reside on two loops, which are the most conserved regions of the protein. In addition, a ring of acidic residues in the proximity of the [Fe(Cys)4] centre is also well-conserved []. ; GO: 0009055 electron carrier activity, 0046872 metal ion binding; PDB: 2RDV_C 1RDV_A 1S24_A 1T9O_B 1B2J_A 1SMW_A 2PVE_B 1BFY_A 1T9P_C 1C09_C ....

>PRK03976 rpl37ae 50S ribosomal protein L37Ae; Reviewed

Probab=83.82  E-value=0.23  Score=24.31  Aligned_cols=31  Identities=19%  Similarity=0.434  Sum_probs=22.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..|++.     .+    .+...| |.|..|++.|+-
T Consensus        35 a~y~CpfCgk~-----~v----kR~a~GIW~C~~C~~~~AG   66 (90)
T PRK03976         35 AKHVCPVCGRP-----KV----KRVGTGIWECRKCGAKFAG   66 (90)
T ss_pred             cCccCCCCCCC-----ce----EEEEEEEEEcCCCCCEEeC
Confidence            67899999754     22    246667 999999987765

>KOG2907|consensus

Probab=81.59  E-value=0.78  Score=23.41  Aligned_cols=37  Identities=16%  Similarity=0.424  Sum_probs=21.2

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC----ccCCcCccccCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK----RICSKCSFLADD   62 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~----~~C~~c~~~f~~   62 (85)
                      ..+|..||..--.-+.++  +|....|    |.|+.|++.|..
T Consensus        74 ~~kCpkCghe~m~Y~T~Q--lRSADEGQTVFYTC~kC~~k~~e  114 (116)
T KOG2907|consen   74 KHKCPKCGHEEMSYHTLQ--LRSADEGQTVFYTCPKCKYKFTE  114 (116)
T ss_pred             hccCcccCCchhhhhhhh--cccccCCceEEEEcCccceeeec
Confidence            356777775433223332  2223444    889999887754

>KOG4173|consensus

Probab=81.41  E-value=0.35  Score=27.36  Aligned_cols=47  Identities=17%  Similarity=0.427  Sum_probs=33.3

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCC---------C---ccC--CcCccccCCHHHHHHHHh
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHN---------K---RIC--SKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~---------~---~~C--~~c~~~f~~~~~l~~h~~   71 (85)
                      -.|.+|.+.|....-|..|+.-.|.         |   |.|  +.|+-.|.....-..|+-
T Consensus       107 ~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I  167 (253)
T KOG4173|consen  107 NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMI  167 (253)
T ss_pred             chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHH
Confidence            4688888888888888887743343         2   666  458888888877777754

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=80.81  E-value=0.64  Score=18.76  Aligned_cols=13  Identities=15%  Similarity=0.370  Sum_probs=9.8

Q ss_pred             ccCCcCccccCCH
Q psy3492          51 RICSKCSFLADDQ   63 (85)
Q Consensus        51 ~~C~~c~~~f~~~   63 (85)
                      |.|+.||..|...
T Consensus         6 y~C~~Cg~~fe~~   18 (41)
T smart00834        6 YRCEDCGHTFEVL   18 (41)
T ss_pred             EEcCCCCCEEEEE
Confidence            7889999877544

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=80.78  E-value=0.23  Score=26.77  Aligned_cols=14  Identities=14%  Similarity=0.275  Sum_probs=8.9

Q ss_pred             CccCCCCccccCCh
Q psy3492          24 PFNCALCEYKAARP   37 (85)
Q Consensus        24 ~~~c~~c~~~f~~~   37 (85)
                      -++|..||.+|...
T Consensus        28 ~~~c~~c~~~f~~~   41 (154)
T PRK00464         28 RRECLACGKRFTTF   41 (154)
T ss_pred             eeeccccCCcceEe
Confidence            36677777766654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=80.32  E-value=2.2  Score=26.33  Aligned_cols=18  Identities=22%  Similarity=0.545  Sum_probs=7.1

Q ss_pred             CCCCccccCChHHHHHHH
Q psy3492          27 CALCEYKAARPERLATHV   44 (85)
Q Consensus        27 c~~c~~~f~~~~~l~~h~   44 (85)
                      |..|...|-.-..|..|.
T Consensus       223 C~FC~~~FYdDDEL~~Hc  240 (493)
T COG5236         223 CIFCKIYFYDDDELRRHC  240 (493)
T ss_pred             hhhccceecChHHHHHHH
Confidence            333333333334444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.87
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.85
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.83
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.82
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.82
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.82
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.81
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.81
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.8
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.79
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.79
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.78
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.77
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.75
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.75
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.71
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.68
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.67
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.66
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.65
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.65
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.64
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.62
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.62
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.6
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.59
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.57
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.56
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.56
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.56
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.55
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.55
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.54
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.54
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.53
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.53
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.53
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.53
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.52
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.51
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.51
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.5
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.5
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.49
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.49
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.49
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.47
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.46
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.44
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.43
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.41
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.4
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.39
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.38
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.38
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.36
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.32
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.28
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.22
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.21
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.18
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.16
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.1
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.1
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.03
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.02
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.99
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.99
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.98
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.98
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.96
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.92
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.92
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.91
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.86
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.86
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.84
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.84
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.81
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.77
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.76
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.68
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.67
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.66
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.64
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.63
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.63
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.62
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.61
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.61
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.61
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.58
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.57
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.56
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.55
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.54
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.94
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.53
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.53
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.53
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.52
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.51
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.5
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.49
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.47
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.46
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.46
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.44
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.43
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.43
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.43
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.43
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.8
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.43
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.42
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.42
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.41
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.41
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.4
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.4
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.38
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.74
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.74
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.37
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.36
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.33
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.31
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.64
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.62
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.28
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.25
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.25
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.24
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.23
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.17
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.02
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.9
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.84
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	97.32
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.94
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.82
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.52
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.48
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.32
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.78
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	94.29
3jyw_9	72	60S ribosomal protein L43; eukaryotic ribosome, RA	92.77
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.49
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.76
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.62
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	91.35
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	90.89
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	89.83
4rxn_A	54	Rubredoxin; electron transfer(iron-sulfur protein)	89.4
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	89.15
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	89.14
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	88.58
1vq8_Z	83	50S ribosomal protein L37AE; ribosome 50S, protein	88.33
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	88.25
3j21_i	83	50S ribosomal protein L37AE; archaea, archaeal, KI	87.9
3iz5_m	92	60S ribosomal protein L43 (L37AE); eukaryotic ribo	87.78
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	87.1
1ffk_W	73	Ribosomal protein L37AE; ribosome assembly, RNA-RN	87.0
3izc_m	92	60S ribosomal protein RPL43 (L37AE); eukaryotic ri	86.8
1e8j_A	52	Rubredoxin; iron-sulfur-protein, zinc-substitution	86.5
4a17_Y	103	RPL37A, 60S ribosomal protein L32; eukaryotic ribo	84.2
1yk4_A	52	Rubredoxin, RD; electron transport; 0.69A {Pyrococ	84.09
3cc2_Z	116	50S ribosomal protein L37AE, 50S ribosomal protein	82.52
2kn9_A	81	Rubredoxin; metalloprotein, ssgcid, structural gen	81.72
1dx8_A	70	Rubredoxin; electron transport, zinc-substitution;	80.49

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=4.5e-24  Score=109.81  Aligned_cols=73  Identities=21%  Similarity=0.254  Sum_probs=69.9

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |++|+++|.....|..|+++|+  +||.|..|++.|.....|..|+ ..|++   |.|++||+.|...+.|..|+++|+
T Consensus        25 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh  102 (133)
T 2lt7_A           25 CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLACGKSFINYQFMSSHIKSVH  102 (133)
T ss_dssp             ETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSSCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhc-cccCCCccccCCCCCCCcCCHHHHHHHhHHhc
Confidence            7899999999999999999998  9999999999999999999999 79987   999999999999999999999875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.87  E-value=1.3e-21  Score=96.78  Aligned_cols=73  Identities=25%  Similarity=0.407  Sum_probs=70.3

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |++|++.|.....|..|+++|.  ++|.|.+|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+
T Consensus        20 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           20 CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR-YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHH-HHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence            7899999999999999999998  9999999999999999999998 78887   999999999999999999999998

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.86  E-value=4.2e-22  Score=94.45  Aligned_cols=73  Identities=19%  Similarity=0.360  Sum_probs=69.2

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |++|++.|.....|..|+++|.  ++|.|..|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|+
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A            4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             CSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             CCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            7899999999999999999987  9999999999999999999999 67776   999999999999999999999885

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=2.2e-21  Score=94.45  Aligned_cols=73  Identities=29%  Similarity=0.581  Sum_probs=70.1

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |++|++.|.....|..|+++|.  ++|.|..|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|+
T Consensus        11 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A           11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             BTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCCCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHhc
Confidence            7899999999999999999998  8999999999999999999999 68877   999999999999999999999998

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=3.7e-21  Score=97.22  Aligned_cols=81  Identities=27%  Similarity=0.403  Sum_probs=73.3

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhh---CCC---ccCCcCccccCCHHHHHHHHhh
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKV---HNK---RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~---h~~---~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |++|++.|.....|..|+++|.  +||.|..|++.|.....|..|+ ..   +.+   |.|+.|++.|.....|..|+++
T Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   88 (124)
T 2dlq_A           10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE-ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS   88 (124)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHH-HHCCCCSCCCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHH-hhhhcCCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            7899999999999999999998  8999999999999999999998 54   333   9999999999999999999999


Q ss_pred             cc---cccCcCCC
Q psy3492          73 HI---FWECSFQD   82 (85)
Q Consensus        73 h~---~~~C~~~~   82 (85)
                      |+   +|.|++..
T Consensus        89 h~~~~~~~C~~C~  101 (124)
T 2dlq_A           89 HTGEMPYKCSSCS  101 (124)
T ss_dssp             HSSSCSEECSSSC
T ss_pred             cCCCCCccCCCcc
Confidence            98   78898753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=4.5e-21  Score=95.09  Aligned_cols=80  Identities=15%  Similarity=0.096  Sum_probs=73.0

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHh-hcc--
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQ-QHI--   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~-~h~--   74 (85)
                      |++|++.|.....|..|+++|.++|.|.+|++.|.....|..|+ . |.+   |.|+.|++.|.....|..|++ +|+  
T Consensus        19 C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   96 (107)
T 1wjp_A           19 CRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN   96 (107)
T ss_dssp             CTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred             CCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhCCHHHHHHHHHHHcCCC
Confidence            78999999999999999999888999999999999999999998 5 776   999999999999999999998 887  


Q ss_pred             -cccCcCCC
Q psy3492          75 -FWECSFQD   82 (85)
Q Consensus        75 -~~~C~~~~   82 (85)
                       +|.+.-+.
T Consensus        97 ~~~~~~~p~  105 (107)
T 1wjp_A           97 NMAPTSGPS  105 (107)
T ss_dssp             CCCCCCCSC
T ss_pred             CCCCCCCCC
Confidence             67765543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=4.2e-21  Score=92.41  Aligned_cols=71  Identities=27%  Similarity=0.531  Sum_probs=67.6

Q ss_pred             CCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           3 RLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .|++.|.....|..|+++|.  ++|.|..|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|+
T Consensus        11 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   86 (90)
T 1a1h_A           11 SCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHTKIHL   86 (90)
T ss_dssp             SCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHH-HHcCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            69999999999999999988  9999999999999999999999 68776   999999999999999999999987

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.8e-20  Score=90.34  Aligned_cols=73  Identities=27%  Similarity=0.551  Sum_probs=68.1

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC-----ccCCcCccccCCHHHHHHHHh-h
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK-----RICSKCSFLADDQETLNEHLQ-Q   72 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~-----~~C~~c~~~f~~~~~l~~h~~-~   72 (85)
                      |++|++.|.....|..|+++|.  ++|.|..|++.|.....|..|+ ..|.+     |.|+.|++.|.....|..|++ +
T Consensus        10 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   88 (95)
T 2yt9_A           10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV   88 (95)
T ss_dssp             CSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHH-HHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHT
T ss_pred             CCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhcCCCCCceECCCccchhCCHHHHHHHHHHh
Confidence            7899999999999999999998  9999999999999999999999 57653     999999999999999999986 7


Q ss_pred             cc
Q psy3492          73 HI   74 (85)
Q Consensus        73 h~   74 (85)
                      |.
T Consensus        89 H~   90 (95)
T 2yt9_A           89 HS   90 (95)
T ss_dssp             SC
T ss_pred             cC
Confidence            76

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.83  E-value=6.7e-21  Score=102.49  Aligned_cols=80  Identities=24%  Similarity=0.444  Sum_probs=51.3

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc-
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI-   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~-   74 (85)
                      |+.|++.|.....|..|+.+|.  ++|.|..|++.|.....|..|+ ..|.+   |.|+.||+.|...+.|..|+++|+ 
T Consensus        80 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A           80 CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            5566666666666666666655  6666666666666666666666 45544   666666666666666666666665 


Q ss_pred             --cccCcCC
Q psy3492          75 --FWECSFQ   81 (85)
Q Consensus        75 --~~~C~~~   81 (85)
                        +|.|++.
T Consensus       159 ~~~~~C~~C  167 (190)
T 2i13_A          159 EKPYKCPEC  167 (190)
T ss_dssp             CCCEECTTT
T ss_pred             CCCeECCCC
Confidence              5666553

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=3.2e-20  Score=93.95  Aligned_cols=79  Identities=25%  Similarity=0.417  Sum_probs=72.6

Q ss_pred             CC--CCcccccChHHHHHHHHhcC-CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc--CccccCCHHHHHHHHhh
Q psy3492           1 MP--RLQVLISYNWCLKRHLNTHI-KPFNCALCEYKAARPERLATHVIKVHNK---RICSK--CSFLADDQETLNEHLQQ   72 (85)
Q Consensus         1 c~--~c~~~f~~~~~l~~h~~~h~-~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~--c~~~f~~~~~l~~h~~~   72 (85)
                      |+  +|++.|.....|..|+.+|. ++|.|..|++.|.....|..|+ ..|.+   |.|+.  |++.|.....|..|+++
T Consensus         8 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   86 (124)
T 1ubd_C            8 CPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI   86 (124)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHHHHHHHHHH
Confidence            55  89999999999999999998 9999999999999999999998 68877   89975  99999999999999999


Q ss_pred             cc---cccCcC
Q psy3492          73 HI---FWECSF   80 (85)
Q Consensus        73 h~---~~~C~~   80 (85)
                      |+   +|.|++
T Consensus        87 h~~~~~~~C~~   97 (124)
T 1ubd_C           87 HTGDRPYVCPF   97 (124)
T ss_dssp             HHCCCCCCCCS
T ss_pred             hCCCCceECCC
Confidence            98   788975

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=1.5e-20  Score=94.49  Aligned_cols=76  Identities=24%  Similarity=0.429  Sum_probs=69.7

Q ss_pred             CCcccccChHHHHHHHHhcC--CCccCC--CCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc-
Q psy3492           3 RLQVLISYNWCLKRHLNTHI--KPFNCA--LCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI-   74 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~~~h~--~~~~c~--~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~-   74 (85)
                      .|++.|.....|..|+++|.  ++|.|.  .|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+ 
T Consensus        13 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   91 (119)
T 2jp9_A           13 GCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTG   91 (119)
T ss_dssp             TSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHT
T ss_pred             CCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHH-HHcCCCCCccCCccCchhCCHHHHHHHHHHhcC
Confidence            49999999999999999987  899999  7999999999999999 67766   999999999999999999999998 


Q ss_pred             --cccCc
Q psy3492          75 --FWECS   79 (85)
Q Consensus        75 --~~~C~   79 (85)
                        +|.|+
T Consensus        92 ~~~~~C~   98 (119)
T 2jp9_A           92 EKPFSCR   98 (119)
T ss_dssp             CCCEECC
T ss_pred             CCCeeCC
Confidence              78883

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=1.8e-20  Score=97.98  Aligned_cols=79  Identities=22%  Similarity=0.328  Sum_probs=51.7

Q ss_pred             CCCCcccccChHHHHHHHHh-cC--CC--------ccCCCCccccCChHHHHHHHHhhCCC---ccCCc--CccccCCHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNT-HI--KP--------FNCALCEYKAARPERLATHVIKVHNK---RICSK--CSFLADDQE   64 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~-h~--~~--------~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~--c~~~f~~~~   64 (85)
                      |+.|++.|.....|..|+.. |.  .+        +.|..|++.|.....|..|+ ..|.+   |.|+.  |++.|....
T Consensus        28 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~  106 (155)
T 2rpc_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCGKIFARSE  106 (155)
T ss_dssp             CCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHT-HHHHCCCSEECSCTTTCCEESCHH
T ss_pred             cccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHH-HhcCCCCcccCCcCCCCCccCCHH
Confidence            56677777777777777665 54  22        56777777777777777776 45554   66665  777777777


Q ss_pred             HHHHHHhhcc---cccCcC
Q psy3492          65 TLNEHLQQHI---FWECSF   80 (85)
Q Consensus        65 ~l~~h~~~h~---~~~C~~   80 (85)
                      .|..|+++|+   +|.|++
T Consensus       107 ~L~~H~~~h~~~~~~~C~~  125 (155)
T 2rpc_A          107 NLKIHKRTHTGEKPFKCEF  125 (155)
T ss_dssp             HHHHHHTTTCSSCSBCCSS
T ss_pred             HHHHHHHhhCCCCCccCCC
Confidence            7777776666   566664

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.7e-20  Score=92.60  Aligned_cols=72  Identities=19%  Similarity=0.409  Sum_probs=68.8

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      | +|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|.
T Consensus        13 C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           13 C-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHTGIKPYECNICAKRFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             C-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTTCCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             c-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHH-HHcCCCCCeeCCCCcchhcCHHHHHHHHHHcc
Confidence            6 79999999999999999998  8999999999999999999999 78877   999999999999999999999887

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.82  E-value=2.6e-20  Score=89.42  Aligned_cols=73  Identities=30%  Similarity=0.523  Sum_probs=67.9

Q ss_pred             CCC--CcccccChHHHHHHHHhcC--CCccCC--CCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHh
Q psy3492           1 MPR--LQVLISYNWCLKRHLNTHI--KPFNCA--LCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus         1 c~~--c~~~f~~~~~l~~h~~~h~--~~~~c~--~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |+.  |++.|.....|..|+.+|.  ++|.|.  .|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|++
T Consensus         8 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (89)
T 2wbs_A            8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLALHMK   86 (89)
T ss_dssp             CCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHHHGG
T ss_pred             CCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            556  9999999999999999998  999997  6999999999999999 68877   999999999999999999999


Q ss_pred             hcc
Q psy3492          72 QHI   74 (85)
Q Consensus        72 ~h~   74 (85)
                      +|.
T Consensus        87 ~H~   89 (89)
T 2wbs_A           87 RHF   89 (89)
T ss_dssp             GGC
T ss_pred             hhC
Confidence            884

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.82  E-value=2.7e-20  Score=88.63  Aligned_cols=72  Identities=28%  Similarity=0.463  Sum_probs=68.3

Q ss_pred             CCCcccccChHHHHHHHHhcC--CCccCCC--CccccCChHHHHHHHHhhCCCccCCc---CccccCCHHHHHHHHhhcc
Q psy3492           2 PRLQVLISYNWCLKRHLNTHI--KPFNCAL--CEYKAARPERLATHVIKVHNKRICSK---CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~h~~~h~--~~~~c~~--c~~~f~~~~~l~~h~~~~h~~~~C~~---c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++|++.|.....|..|+++|.  +||.|..  |++.|.....|..|+ +.|.+|.|+.   |++.|...+.|..|+++|+
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHSEECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            889999999999999999998  9999988  999999999999999 7888899999   9999999999999999874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.81  E-value=2.9e-20  Score=100.00  Aligned_cols=73  Identities=29%  Similarity=0.491  Sum_probs=69.1

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |++|++.|.....|..|+++|.  +||.|..|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+
T Consensus       108 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          108 CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ-RTHTGEKPYKCPECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             CTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHTTC-
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHH-HhcCCCCCeECCCCCCccCCHHHHHHHHHhcC
Confidence            7899999999999999999988  9999999999999999999999 68876   999999999999999999999997

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.81  E-value=1.5e-19  Score=88.36  Aligned_cols=71  Identities=28%  Similarity=0.547  Sum_probs=66.9

Q ss_pred             CCcccccChHHHHHHHHhcC--CCccCC--CCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           3 RLQVLISYNWCLKRHLNTHI--KPFNCA--LCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~~~h~--~~~~c~--~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +|++.|.....|..|+++|.  ++|.|.  .|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|+
T Consensus        22 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           22 GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             SCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHH-HHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             CCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCcCccCCHHHHHHHHHHhC
Confidence            59999999999999999998  999996  6999999999999999 68877   999999999999999999999885

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=4.4e-20  Score=92.74  Aligned_cols=70  Identities=31%  Similarity=0.514  Sum_probs=66.5

Q ss_pred             CCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC--CcCccccCCHHHHHHHHhhc
Q psy3492           3 RLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC--SKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C--~~c~~~f~~~~~l~~h~~~h   73 (85)
                      +|++.|.....|..|+++|.  ++|.|..|++.|.....|..|+ ..|.+   |.|  +.||+.|...+.|..|+++|
T Consensus        43 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           43 DCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHH-HHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            79999999999999999988  9999999999999999999999 68876   999  89999999999999999986

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.80  E-value=2.7e-20  Score=83.90  Aligned_cols=51  Identities=31%  Similarity=0.616  Sum_probs=47.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +||.|.+||+.|...+.|..|+ ++|+|   |.|++||+.|...+.|..|+++|+
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHR-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred             CCccCCCCCCEeCCHHHHHHHH-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence            7899999999999999999998 78988   999999999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.79  E-value=4e-19  Score=92.85  Aligned_cols=78  Identities=27%  Similarity=0.437  Sum_probs=73.3

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCC--CccccCChHHHHHHHHhhCCC---ccCCc--CccccCCHHHHHHHHh
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCAL--CEYKAARPERLATHVIKVHNK---RICSK--CSFLADDQETLNEHLQ   71 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~~--c~~~f~~~~~l~~h~~   71 (85)
                      |++|++.|.....|..|+++|.  ++|.|..  |++.|.....|..|+ ..|.+   |.|+.  |++.|...+.|..|++
T Consensus        65 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A           65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             CTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             CCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            7889999999999999999998  9999998  999999999999999 78887   99996  9999999999999999


Q ss_pred             hcc---cccCc
Q psy3492          72 QHI---FWECS   79 (85)
Q Consensus        72 ~h~---~~~C~   79 (85)
                      +|+   +|.|.
T Consensus       144 ~H~~~k~~~c~  154 (155)
T 2rpc_A          144 VHTSDKSGPSS  154 (155)
T ss_dssp             TTTSCCCSCSC
T ss_pred             HhcCCCCCCCC
Confidence            998   78775

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.79  E-value=1.2e-18  Score=93.73  Aligned_cols=79  Identities=25%  Similarity=0.451  Sum_probs=38.8

Q ss_pred             CCCcccccChHHHHHHHHhcC--CCccCC--CCccccCChHHHHHHHHhhCC-C---ccC--CcCccccCCHHHHHHHHh
Q psy3492           2 PRLQVLISYNWCLKRHLNTHI--KPFNCA--LCEYKAARPERLATHVIKVHN-K---RIC--SKCSFLADDQETLNEHLQ   71 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~h~~~h~--~~~~c~--~c~~~f~~~~~l~~h~~~~h~-~---~~C--~~c~~~f~~~~~l~~h~~   71 (85)
                      ++|++.|.....|..|+++|.  ++|.|.  .|++.|.....|..|+...|. +   |.|  +.||+.|...+.|..|++
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence            345555555555555555544  455555  455555555555555422331 1   445  445555555555555555


Q ss_pred             hcc---cccCcC
Q psy3492          72 QHI---FWECSF   80 (85)
Q Consensus        72 ~h~---~~~C~~   80 (85)
                      +|+   +|.|++
T Consensus       128 ~H~~~~~~~C~~  139 (190)
T 1tf6_A          128 SHTQQLPYECPH  139 (190)
T ss_dssp             GGSSSCSSBCCS
T ss_pred             HhCCCCCccCCC
Confidence            554   444443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.78  E-value=1.7e-18  Score=93.12  Aligned_cols=77  Identities=18%  Similarity=0.300  Sum_probs=68.9

Q ss_pred             CCcccccChHHHHHHH-HhcC---CCccC--CCCccccCChHHHHHHHHhhCCC---ccCCc--CccccCCHHHHHHHHh
Q psy3492           3 RLQVLISYNWCLKRHL-NTHI---KPFNC--ALCEYKAARPERLATHVIKVHNK---RICSK--CSFLADDQETLNEHLQ   71 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~-~~h~---~~~~c--~~c~~~f~~~~~l~~h~~~~h~~---~~C~~--c~~~f~~~~~l~~h~~   71 (85)
                      .|++.|.....|..|+ ..|.   ++|.|  ..|++.|.....|..|+ ..|.+   |.|+.  |++.|...+.|..|++
T Consensus        79 ~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~  157 (190)
T 1tf6_A           79 GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEK  157 (190)
T ss_dssp             SCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHH-GGGSSSCSSBCCSSSCCCBCSSHHHHHHHHT
T ss_pred             CCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCCchhcCHHHHHHHHH
Confidence            8999999999999999 5773   78999  88999999999999998 68887   99987  9999999999999999


Q ss_pred             hcccccCcC
Q psy3492          72 QHIFWECSF   80 (85)
Q Consensus        72 ~h~~~~C~~   80 (85)
                      +|++|.|++
T Consensus       158 ~H~~~~C~~  166 (190)
T 1tf6_A          158 VHAGYPCKK  166 (190)
T ss_dssp             SSCSCCCCS
T ss_pred             HhCCCcCCC
Confidence            998777766

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2e-18  Score=87.08  Aligned_cols=73  Identities=23%  Similarity=0.334  Sum_probs=67.3

Q ss_pred             CCCCcccccChHHHHHHHHhc---C--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHh-
Q psy3492           1 MPRLQVLISYNWCLKRHLNTH---I--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQ-   71 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h---~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~-   71 (85)
                      |+.|++.|.....|..|+..+   .  ++|.|.+|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|++ 
T Consensus        38 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           38 CPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM-VSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             CTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH-HHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence            789999999999999999964   3  8999999999999999999999 68877   999999999999999999997 


Q ss_pred             hcc
Q psy3492          72 QHI   74 (85)
Q Consensus        72 ~h~   74 (85)
                      .|.
T Consensus       117 ~H~  119 (124)
T 2dlq_A          117 LHS  119 (124)
T ss_dssp             TSS
T ss_pred             HCC
Confidence            455

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.77  E-value=3.3e-19  Score=90.17  Aligned_cols=73  Identities=27%  Similarity=0.473  Sum_probs=68.4

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCC--CccccCChHHHHHHHHhhCCC---ccCC--cCccccCCHHHHHHHHh
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCAL--CEYKAARPERLATHVIKVHNK---RICS--KCSFLADDQETLNEHLQ   71 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~--~c~~~f~~~~~l~~h~~   71 (85)
                      |++|++.|.....|..|+.+|.  ++|.|..  |++.|.....|..|+ ..|.+   |.|+  .|++.|...+.|..|++
T Consensus        37 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           37 CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHH-HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             CCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCCCCceECCCCCCCCccCCHHHHHHHHH
Confidence            7899999999999999999998  9999986  999999999999999 68876   9995  59999999999999999


Q ss_pred             hcc
Q psy3492          72 QHI   74 (85)
Q Consensus        72 ~h~   74 (85)
                      +|+
T Consensus       116 ~H~  118 (124)
T 1ubd_C          116 THA  118 (124)
T ss_dssp             HHC
T ss_pred             HHc
Confidence            987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=5.2e-19  Score=92.33  Aligned_cols=69  Identities=26%  Similarity=0.506  Sum_probs=32.1

Q ss_pred             cccccChHHHHHHHHhcC--CCccCCC--CccccCChHHHHHHHHhhCCC---ccCCc--CccccCCHHHHHHHH-hhcc
Q psy3492           5 QVLISYNWCLKRHLNTHI--KPFNCAL--CEYKAARPERLATHVIKVHNK---RICSK--CSFLADDQETLNEHL-QQHI   74 (85)
Q Consensus         5 ~~~f~~~~~l~~h~~~h~--~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~~--c~~~f~~~~~l~~h~-~~h~   74 (85)
                      ++.|.....|..|+++|.  +||.|..  |++.|.....|..|+ ..|.+   |.|+.  |++.|...+.|..|+ ++|+
T Consensus        46 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~  124 (155)
T 2gli_A           46 LRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS  124 (155)
T ss_dssp             TCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHH-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             hhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHH-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            344444444444444443  4444442  444444444444444 34443   44444  444444444444444 3444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.77  E-value=5.7e-20  Score=88.33  Aligned_cols=72  Identities=24%  Similarity=0.318  Sum_probs=67.4

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC--ccCCcCccccCCHHHHHHHHhhc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK--RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~--~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |++|++.|.....|..|+++|.  +||.|..|++.|.....|..|+ ..+.+  |.|+.|++.|.....|..|++..
T Consensus         6 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C            6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQHILPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHH-HHhCCCcchHHHHHHHHHHHhhhHHHHHHH
Confidence            7899999999999999999998  8999999999999999999999 57766  99999999999999999999854

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.75  E-value=4.7e-19  Score=88.68  Aligned_cols=73  Identities=14%  Similarity=0.077  Sum_probs=66.7

Q ss_pred             CCCCcccccChHHHHHHHHh--cC--CC-ccCCCCcccc--CChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNT--HI--KP-FNCALCEYKA--ARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHL   70 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~--h~--~~-~~c~~c~~~f--~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~   70 (85)
                      |++|++.|.....|..|+++  |.  ++ +.|..|++.|  .....|..|+ ..|.+   |.|+.|++.|...+.|..|+
T Consensus        22 C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~  100 (115)
T 2dmi_A           22 CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKVLKCMYCGHSFESLQDLSVHM  100 (115)
T ss_dssp             BSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSSCBCSSSCCBCSSHHHHHHHH
T ss_pred             CCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCCcceECCCCCCccCCHHHHHHHH
Confidence            78999999999999999998  76  44 4599999999  8899999998 78887   99999999999999999999


Q ss_pred             hhcc
Q psy3492          71 QQHI   74 (85)
Q Consensus        71 ~~h~   74 (85)
                      ++|.
T Consensus       101 ~~hh  104 (115)
T 2dmi_A          101 IKTK  104 (115)
T ss_dssp             HHTT
T ss_pred             HHhC
Confidence            9887

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=1.6e-18  Score=78.07  Aligned_cols=49  Identities=22%  Similarity=0.312  Sum_probs=47.1

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++||++|.....|..|+++|+  +||.|.+||+.|...+.|..|+ ++|+|
T Consensus         7 C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~-~~Htg   57 (60)
T 4gzn_C            7 CNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHL-KVHQN   57 (60)
T ss_dssp             CTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHG-GGGSC
T ss_pred             CCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHh-CccCC
Confidence            7899999999999999999999  9999999999999999999999 78876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=4.5e-18  Score=88.77  Aligned_cols=72  Identities=25%  Similarity=0.404  Sum_probs=67.2

Q ss_pred             CCcccccChHHHHHHHHhcC--CCccCCC--CccccCChHHHHHHHHhhCCC---ccCCc--CccccCCHHHHHHHHhhc
Q psy3492           3 RLQVLISYNWCLKRHLNTHI--KPFNCAL--CEYKAARPERLATHVIKVHNK---RICSK--CSFLADDQETLNEHLQQH   73 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~~~h~--~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~~--c~~~f~~~~~l~~h~~~h   73 (85)
                      +|++.|.....|..|+++|.  +||.|..  |++.|.....|..|+...|.+   |.|+.  |++.|...+.|..|+++|
T Consensus        74 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A           74 GCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             TCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            59999999999999999998  9999998  999999999999998457887   99988  999999999999999987


Q ss_pred             c
Q psy3492          74 I   74 (85)
Q Consensus        74 ~   74 (85)
                      +
T Consensus       154 h  154 (155)
T 2gli_A          154 H  154 (155)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.1e-17  Score=80.68  Aligned_cols=67  Identities=15%  Similarity=0.239  Sum_probs=61.1

Q ss_pred             ccccChHHHHHHHHhcC--CCccCCCCcccc-CChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHH-Hhhcc
Q psy3492           6 VLISYNWCLKRHLNTHI--KPFNCALCEYKA-ARPERLATHVIKVHNK---RICSKCSFLADDQETLNEH-LQQHI   74 (85)
Q Consensus         6 ~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f-~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h-~~~h~   74 (85)
                      .+|.....+..|++.+.  ++|.|..|++.| .....|..|+ +.| +   |.|.+||+.|...+.|..| +++|+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~-~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHM-ENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHH-HHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHH-HHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            35667788888988887  999999999999 9999999999 688 6   9999999999999999999 89998

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.8e-17  Score=77.89  Aligned_cols=59  Identities=27%  Similarity=0.444  Sum_probs=45.7

Q ss_pred             CCCcccccChHHHHHHHH-hcC--CCccCCC--CccccCChHHHHHHHHhhCCC---ccCCcCccccC
Q psy3492           2 PRLQVLISYNWCLKRHLN-THI--KPFNCAL--CEYKAARPERLATHVIKVHNK---RICSKCSFLAD   61 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~h~~-~h~--~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~   61 (85)
                      ++|++.|.....|..|++ .|.  ++|.|..  |++.|.....|..|+ ..|.+   |.|+.||+.|.
T Consensus        13 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           13 PGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             TTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCSSSCCCC
T ss_pred             CCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH-HHhCCCCCeeCCCCCCCCC
Confidence            458888888888888887 576  7888887  888888888888887 57765   78888887773

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.2e-16  Score=74.88  Aligned_cols=55  Identities=18%  Similarity=0.339  Sum_probs=51.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWEC   78 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C   78 (85)
                      ++|.|.+|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+   +|.|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            8999999999999999999999 78887   999999999999999999999998   7776

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.9e-17  Score=80.99  Aligned_cols=67  Identities=16%  Similarity=0.142  Sum_probs=59.7

Q ss_pred             cccChHHHHHHHHhcC--CCccCCCCccccC-ChHHHHHHHHhhCCC----ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           7 LISYNWCLKRHLNTHI--KPFNCALCEYKAA-RPERLATHVIKVHNK----RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         7 ~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~-~~~~l~~h~~~~h~~----~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .+.....+..|+++|.  ++|.|.+|++.|. ....|..|+ +.|.+    |.|+.|++.|.....|..|+++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~-~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHM-EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHH-HHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHH-HHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            4455566778999998  9999999999999 999999999 67664    999999999999999999999988

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=8e-17  Score=76.67  Aligned_cols=69  Identities=23%  Similarity=0.376  Sum_probs=58.9

Q ss_pred             HHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCC-----C-ccCCcCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          14 LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHN-----K-RICSKCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        14 l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~-----~-~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      +..|+++|+  +||.|.+|++.|.....|..|++..+.     . |.|+.|++.|.....|..|+++|+   ++.|+...
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            456788888  999999999999999999999843343     2 899999999999999999999998   78777643

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.66  E-value=2.6e-16  Score=75.24  Aligned_cols=51  Identities=18%  Similarity=0.298  Sum_probs=45.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHh-hcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQ-QHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~-~h~   74 (85)
                      +++.|.+|++.|.....|..|+ +.|.+   |.|+.|++.|...+.|..|++ +|+
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHL-RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHH-HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCEECCCCCCCcCcHHHHhhhh-hhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            7899999999999999999999 68877   999999999999999999964 665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.65  E-value=8.7e-16  Score=78.09  Aligned_cols=67  Identities=19%  Similarity=0.373  Sum_probs=58.9

Q ss_pred             ccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           6 VLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         6 ~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +.|.....|..|+. |+  +||.|..|++.|.....|..|+ +.|.. |.|+.||+.|...+.|..|+++|+
T Consensus        55 ~~~~~~~~l~~h~~-h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           55 QLLDESSYLYRLLA-SKAISQFVCPLCLMPFSSSVSLKQHI-RYTEHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             GGTTTHHHHHHHHH-HHHHCSEECTTTCCEESSHHHHHHHH-HHTCCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             cccCCHHHHHHHHH-hCCCCCeECCCCCcccCCHhHHHHHH-HHCCCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            34556777777774 55  9999999999999999999999 68844 999999999999999999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=6.1e-17  Score=75.89  Aligned_cols=61  Identities=21%  Similarity=0.512  Sum_probs=53.9

Q ss_pred             HHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC----ccCCcCccccCCHHHHHHHHhhccc
Q psy3492          15 KRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK----RICSKCSFLADDQETLNEHLQQHIF   75 (85)
Q Consensus        15 ~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~----~~C~~c~~~f~~~~~l~~h~~~h~~   75 (85)
                      ..|+++|+  +||.|.+|++.|.....|..|++..|.+    |.|+.|++.|...+.|..|++++.+
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            45777888  9999999999999999999998336764    9999999999999999999998763

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.64  E-value=3.6e-16  Score=80.30  Aligned_cols=63  Identities=16%  Similarity=0.244  Sum_probs=56.0

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC--------ccCCcCccccCCH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK--------RICSKCSFLADDQ   63 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~--------~~C~~c~~~f~~~   63 (85)
                      |++|++.|.....|..|+++|+  +||.|.+|++.|.....|..|++..|.+        |.|..|++.|...
T Consensus        53 C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           53 CRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            7899999999999999999998  9999999999999999999999433422        8899999988754

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.4e-16  Score=72.51  Aligned_cols=55  Identities=27%  Similarity=0.507  Sum_probs=50.9

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++|+  +||.|.+|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            4566  8999999999999999999999 68876   999999999999999999999987

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.62  E-value=1.3e-15  Score=67.42  Aligned_cols=50  Identities=22%  Similarity=0.620  Sum_probs=38.6

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ||.|..|++.|.....|..|+ ..|.+   |.|+.||+.|...+.|..|+++|+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            577778888888888888887 57766   778888888888888888877765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=9.7e-16  Score=71.24  Aligned_cols=51  Identities=27%  Similarity=0.519  Sum_probs=48.5

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++|.|..|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|+
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   69 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHTRIHS   69 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHH-HHHCCCCSEECTTTCCEESCHHHHHHHHHHHC
T ss_pred             CCeECCCCCceeCCHHHHHHHH-HHcCCCCCEECCCCCchhCCHHHHHHHHHhcC
Confidence            8999999999999999999999 68887   999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.3e-16  Score=76.77  Aligned_cols=58  Identities=24%  Similarity=0.573  Sum_probs=51.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhC---CC---ccCCcCccccCCHHHHHHH-Hhhcc---cccCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVH---NK---RICSKCSFLADDQETLNEH-LQQHI---FWECSF   80 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h---~~---~~C~~c~~~f~~~~~l~~h-~~~h~---~~~C~~   80 (85)
                      +||.|..|++.|...+.|..|++..|   .+   |.|++||+.|...+.|..| +++|+   +|.|.+
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            88999999999999999999983258   43   9999999999999999999 88998   898876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.60  E-value=9.3e-16  Score=67.90  Aligned_cols=51  Identities=24%  Similarity=0.466  Sum_probs=40.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +||.|..|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|.
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHL-RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHH-HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            5788888888888888888888 57765   888888888888888888888764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.7e-15  Score=69.71  Aligned_cols=51  Identities=25%  Similarity=0.598  Sum_probs=48.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++|.|.+|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHH-GGGCCSCSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHH-HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHh
Confidence            8999999999999999999999 68877   999999999999999999999887

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=9.1e-16  Score=69.83  Aligned_cols=55  Identities=15%  Similarity=0.300  Sum_probs=48.5

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhh-C-CC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKV-H-NK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~-h-~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++|+  +||.|..|++.|.....|..|+ .. | .+   |.|+.||+.|...+.|..|+++++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHY-VTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHH-HHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHH-HHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            3566  8999999999999999999998 55 7 45   999999999999999999998764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.3e-15  Score=69.91  Aligned_cols=52  Identities=25%  Similarity=0.334  Sum_probs=48.7

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC   53 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C   53 (85)
                      |++|++.|.....|..|+++|.  +||.|.+|++.|.....|..|+ +.|.+   |.|
T Consensus        21 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~~C   77 (77)
T 2cot_A           21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPSSG   77 (77)
T ss_dssp             CSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-GGSCCCCCCCC
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            7899999999999999999998  9999999999999999999999 78887   655

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=4e-15  Score=66.48  Aligned_cols=51  Identities=27%  Similarity=0.526  Sum_probs=42.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHH-hhcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHL-QQHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~-~~h~   74 (85)
                      +||.|..|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+ ++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            5788888888888888888888 67776   88888888888888888886 5665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=4e-15  Score=71.09  Aligned_cols=50  Identities=22%  Similarity=0.295  Sum_probs=46.7

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|+  +||.|..|++.|.....|..|++..|.+
T Consensus        31 C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           31 CPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            8999999999999999999998  9999999999999999999997567754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=6.7e-15  Score=71.25  Aligned_cols=59  Identities=31%  Similarity=0.691  Sum_probs=54.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      +||.|..|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+   +|.|++..
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   71 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICP   71 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSS
T ss_pred             cCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCC
Confidence            7999999999999999999999 68876   999999999999999999999998   78898753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.56  E-value=1.3e-14  Score=71.37  Aligned_cols=59  Identities=24%  Similarity=0.447  Sum_probs=54.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      ++|.|..|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+   +|.|++..
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   80 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECG   80 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSC
T ss_pred             cCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcC
Confidence            7899999999999999999999 68876   999999999999999999999998   79998754

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.56  E-value=1.2e-14  Score=64.19  Aligned_cols=49  Identities=22%  Similarity=0.502  Sum_probs=45.9

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|.  +||.|..|++.|.....|..|+ +.|.+
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~   54 (57)
T 1bbo_A            4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM-KSKAH   54 (57)
T ss_dssp             CTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHH-HSSSS
T ss_pred             CCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHH-HHhcc
Confidence            7899999999999999999998  9999999999999999999999 67754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=1.9e-17  Score=82.76  Aligned_cols=71  Identities=14%  Similarity=0.110  Sum_probs=61.0

Q ss_pred             hHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhh--CCC----ccCCcCcccc--CCHHHHHHHHhhcc---ccc
Q psy3492          11 NWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKV--HNK----RICSKCSFLA--DDQETLNEHLQQHI---FWE   77 (85)
Q Consensus        11 ~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~--h~~----~~C~~c~~~f--~~~~~l~~h~~~h~---~~~   77 (85)
                      ...|..|+++|+  +||.|..|++.|.....|..|+ ..  +.+    +.|+.|++.|  .....|..|+++|+   +|.
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHH-HHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            345667888888  9999999999999999999999 67  544    5699999999  89999999999998   899


Q ss_pred             CcCCC
Q psy3492          78 CSFQD   82 (85)
Q Consensus        78 C~~~~   82 (85)
                      |++..
T Consensus        83 C~~C~   87 (115)
T 2dmi_A           83 CMYCG   87 (115)
T ss_dssp             CSSSC
T ss_pred             CCCCC
Confidence            98753

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.3e-14  Score=64.79  Aligned_cols=50  Identities=30%  Similarity=0.504  Sum_probs=46.2

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|.  +||.|..|++.|.....|..|++..|.+
T Consensus         5 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            7899999999999999999998  8999999999999999999997457765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.1e-14  Score=68.21  Aligned_cols=59  Identities=24%  Similarity=0.453  Sum_probs=53.6

Q ss_pred             CCccCCC--CccccCChHHHHHHHHh-hCCC---ccCCc--CccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIK-VHNK---RICSK--CSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~-~h~~---~~C~~--c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      ++|.|..  |++.|.....|..|+ . .|.+   |.|+.  |++.|...+.|..|+++|+   +|.|++..
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~-~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~   75 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHK-KYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSG   75 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHH-HHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSS
T ss_pred             CCccCCCCCCcCccCCHHHHHHHH-HHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCC
Confidence            6888887  999999999999999 6 6876   99998  9999999999999999998   89998754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=1.2e-14  Score=67.51  Aligned_cols=49  Identities=33%  Similarity=0.633  Sum_probs=46.5

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|.  ++|.|.+|++.|.....|..|+ +.|.+
T Consensus        20 C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~   70 (74)
T 2lce_A           20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT-RIHSG   70 (74)
T ss_dssp             CTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHH-HHHCC
T ss_pred             CCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHH-HhcCC
Confidence            7899999999999999999998  9999999999999999999999 68875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.54  E-value=2e-15  Score=72.27  Aligned_cols=57  Identities=23%  Similarity=0.417  Sum_probs=51.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc--cccCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI--FWECSF   80 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~--~~~C~~   80 (85)
                      +||.|..|++.|.....|..|+ ..|.+   |.|+.|++.|...+.|..|+++|.  ++.|+.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~   63 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK   63 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHH
Confidence            6899999999999999999999 68877   999999999999999999999988  566653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=6.5e-15  Score=72.52  Aligned_cols=56  Identities=16%  Similarity=0.269  Sum_probs=50.9

Q ss_pred             CCCCcccccChHHHHHHHH-hc---C--CCccCCCCccccCChHHHHHH-HHhhCCC---ccCCcCc
Q psy3492           1 MPRLQVLISYNWCLKRHLN-TH---I--KPFNCALCEYKAARPERLATH-VIKVHNK---RICSKCS   57 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~-~h---~--~~~~c~~c~~~f~~~~~l~~h-~~~~h~~---~~C~~c~   57 (85)
                      |++|++.|.....|..|++ +|   .  +||.|.+||+.|...+.|..| + ++|++   |.|..+.
T Consensus        21 C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~-r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           21 CKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNL-KYHPGEENFKLTMVK   86 (102)
T ss_dssp             CSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHH-HTSTTCCCEEEEECC
T ss_pred             CCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhcCCCCCeeCCccc
Confidence            7899999999999999997 58   5  899999999999999999999 7 79998   8887643

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.4e-15  Score=72.39  Aligned_cols=61  Identities=20%  Similarity=0.360  Sum_probs=55.1

Q ss_pred             hcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          20 THI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        20 ~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      .|+  ++|.| .|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+   +|.|++..
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   72 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICA   72 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHH-HHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCc
Confidence            355  89999 8999999999999999 68876   999999999999999999999998   78898753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.53  E-value=6.7e-15  Score=69.30  Aligned_cols=58  Identities=22%  Similarity=0.502  Sum_probs=52.8

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      ||.|..|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+   +|.|++..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   64 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCG   64 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTS
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcc
Confidence            689999999999999999999 67766   999999999999999999999988   78888743

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=2.5e-14  Score=69.12  Aligned_cols=59  Identities=17%  Similarity=0.338  Sum_probs=54.1

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc-----cccCcCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI-----FWECSFQD   82 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~-----~~~C~~~~   82 (85)
                      ++|.|..|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+     +|.|++..
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~   72 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCG   72 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHH-HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSC
T ss_pred             CCeECCCCCCccCChHHHHHHH-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCcc
Confidence            7899999999999999999999 68877   999999999999999999999987     58888754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=5.4e-14  Score=66.74  Aligned_cols=59  Identities=14%  Similarity=0.130  Sum_probs=53.2

Q ss_pred             CCCCcccccChHHHHHHHHhcC------CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCcccc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI------KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLA   60 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~------~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f   60 (85)
                      |++|++.|.....|..|+..|.      ++|.|.+|++.|.....|..|+ ..|.+   +.|..||..|
T Consensus        18 C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA-DNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH-HHCCCCCSCCCCCCCCCC
T ss_pred             CCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH-HHccCCCCcccCCCCCCC
Confidence            7899999999999999998765      3799999999999999999999 68877   8999998765

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.5e-15  Score=67.61  Aligned_cols=51  Identities=24%  Similarity=0.655  Sum_probs=47.4

Q ss_pred             CCccCC--CCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          23 KPFNCA--LCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        23 ~~~~c~--~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++|.|.  .|++.|.....|..|+ ..|.+   |.|+.||+.|...+.|..|+++|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHH-HhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            899997  5999999999999999 68876   999999999999999999999885

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.52  E-value=1.6e-14  Score=63.82  Aligned_cols=47  Identities=36%  Similarity=0.674  Sum_probs=44.3

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      |++|++.|.....|..|+++|.  +||.|..|++.|.....|..|+ ..|
T Consensus         7 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h   55 (57)
T 3uk3_C            7 CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHL-ERH   55 (57)
T ss_dssp             CTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHH-HHH
T ss_pred             CCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHH-HHh
Confidence            7899999999999999999998  9999999999999999999998 554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.8e-14  Score=66.56  Aligned_cols=49  Identities=22%  Similarity=0.380  Sum_probs=45.9

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|.  +||.|.+|++.|.....|..|+ +.|.+
T Consensus        17 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~   67 (72)
T 1x6e_A           17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ-RIHTS   67 (72)
T ss_dssp             CSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHH-HHHHS
T ss_pred             CCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHH-HhcCC
Confidence            7899999999999999999998  9999999999999999999999 67754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=4.8e-15  Score=73.20  Aligned_cols=62  Identities=19%  Similarity=0.314  Sum_probs=55.2

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHHHHHHHHhhcc---cccCcCC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQETLNEHLQQHI---FWECSFQ   81 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~   81 (85)
                      +++|.  ++|.|.+|++.|.....|..|+ ..|.. |.|+.|++.|.....|..|++ |+   +|.|++.
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C   75 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHE-RLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLEC   75 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHH-HHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGG
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHH-HHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccc
Confidence            34566  8999999999999999999999 67866 999999999999999999996 87   7888864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.8e-14  Score=65.57  Aligned_cols=49  Identities=24%  Similarity=0.512  Sum_probs=45.7

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|.  ++|.|.+|++.|.....|..|+ +.|.+
T Consensus        12 C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~   62 (70)
T 1x5w_A           12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKFHG   62 (70)
T ss_dssp             CSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHH-HHHHS
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHH-HHHhC
Confidence            7899999999999999999998  9999999999999999999999 56654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=5.8e-14  Score=65.71  Aligned_cols=51  Identities=18%  Similarity=0.432  Sum_probs=45.6

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC----C--ccCCcCccccCCHHHHHHHHh-hcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN----K--RICSKCSFLADDQETLNEHLQ-QHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~----~--~~C~~c~~~f~~~~~l~~h~~-~h~   74 (85)
                      +||.|.+|++.|.....|..|+ ..|.    .  |.|+.|++.|...+.|..|++ .|.
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            6 SGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             cCeECCCCCCeeCCHHHHHHHH-HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            8999999999999999999999 6775    2  999999999999999999995 455

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=7.6e-14  Score=67.99  Aligned_cols=49  Identities=22%  Similarity=0.316  Sum_probs=46.6

Q ss_pred             CCCCcccc-cChHHHHHHHHhcC-CCccCCCCccccCChHHHHHH-HHhhCCC
Q psy3492           1 MPRLQVLI-SYNWCLKRHLNTHI-KPFNCALCEYKAARPERLATH-VIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f-~~~~~l~~h~~~h~-~~~~c~~c~~~f~~~~~l~~h-~~~~h~~   50 (85)
                      |++|++.| .....|..|+++|. +||.|.+|++.|.....|..| + ..|++
T Consensus        37 C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~-~~H~~   88 (96)
T 2ctd_A           37 CPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM-ANHNS   88 (96)
T ss_dssp             CTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHH-HHTCC
T ss_pred             CCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhH-HhcCC
Confidence            78999999 99999999999988 999999999999999999999 7 78887

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.49  E-value=2.6e-14  Score=68.34  Aligned_cols=59  Identities=20%  Similarity=0.585  Sum_probs=53.2

Q ss_pred             CCccCC--CCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          23 KPFNCA--LCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        23 ~~~~c~--~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      +||.|.  .|++.|.....|..|+ ..|.+   |.|+.|++.|.....|..|+++|+   +|.|++..
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   69 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG   69 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             CceECCCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCC
Confidence            689998  5999999999999999 67766   999999999999999999999988   78888743

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=9.6e-14  Score=67.05  Aligned_cols=55  Identities=20%  Similarity=0.207  Sum_probs=46.8

Q ss_pred             CccCCCCccccCChHHHHHHHHhh-CCC-----------ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          24 PFNCALCEYKAARPERLATHVIKV-HNK-----------RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~-h~~-----------~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      .+.|..|++.|.....|..|+ .. |.+           |.|+.|++.|.....|..|+++|+   +|.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~-~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHH-HHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHH-HHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            366888999999999999998 55 765           578999999999999999999988   78886

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=1e-13  Score=66.98  Aligned_cols=53  Identities=19%  Similarity=0.177  Sum_probs=48.3

Q ss_pred             CCCCcccccChHHHHHHHHh-cC--CC--------ccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNT-HI--KP--------FNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~-h~--~~--------~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+.|++.|.....|..|+++ |.  ++        |.|..|++.|.....|..|+ ++|++   |.|+
T Consensus        28 C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   94 (95)
T 2ej4_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHHTCCCCSSC
T ss_pred             ccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            67899999999999999998 87  55        89999999999999999999 78887   8875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.46  E-value=5.9e-14  Score=66.36  Aligned_cols=56  Identities=20%  Similarity=0.353  Sum_probs=51.3

Q ss_pred             CccC--CCCccccCChHHHHHHHHhhCCC---ccCCc--CccccCCHHHHHHHHhhcccccCcC
Q psy3492          24 PFNC--ALCEYKAARPERLATHVIKVHNK---RICSK--CSFLADDQETLNEHLQQHIFWECSF   80 (85)
Q Consensus        24 ~~~c--~~c~~~f~~~~~l~~h~~~~h~~---~~C~~--c~~~f~~~~~l~~h~~~h~~~~C~~   80 (85)
                      ||.|  ..|++.|.....|..|+ ..|.+   |.|+.  |++.|.....|..|+++|+.|.|+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~   63 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK   63 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHSEECCS
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCC
Confidence            6899  89999999999999999 68876   99988  9999999999999999998777766

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=2.9e-13  Score=61.40  Aligned_cols=47  Identities=23%  Similarity=0.345  Sum_probs=43.3

Q ss_pred             CCCCcccccChHHHHHHHHh-c-C--CCccCCCCccccCChHHHHHHHHhhC
Q psy3492           1 MPRLQVLISYNWCLKRHLNT-H-I--KPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~-h-~--~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      |++|++.|.....|..|+.. | .  +||.|..|++.|...+.|..|+ ..+
T Consensus        13 C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~-~~~   63 (66)
T 2drp_A           13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV-KII   63 (66)
T ss_dssp             CTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHH-HHH
T ss_pred             CCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHH-HHH
Confidence            78999999999999999997 7 4  9999999999999999999998 444

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=3.9e-14  Score=64.50  Aligned_cols=49  Identities=18%  Similarity=0.376  Sum_probs=44.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCC-cCccccCCHHHHHHHHhhcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICS-KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~-~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +||.|..|++.|. ...|..|+ +. .+   |.|+ .||+.|...+.|..|+++|.
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~-~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQ-YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHH-HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCeeccccCCccC-HHHHHHHH-HH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            7899999999999 99999998 56 65   9999 99999999999999999876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.41  E-value=5.4e-13  Score=63.60  Aligned_cols=59  Identities=20%  Similarity=0.532  Sum_probs=53.3

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCCC---ccCC--cCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHNK---RICS--KCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~--~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      .+|.|..  |++.|.....|..|+ ..|.+   |.|+  .|++.|.....|..|+++|+   +|.|++..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   72 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD   72 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH-TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSS
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCC
Confidence            5789999  999999999999999 78887   9997  69999999999999999998   78888753

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=5.2e-13  Score=62.42  Aligned_cols=50  Identities=22%  Similarity=0.350  Sum_probs=46.0

Q ss_pred             CCCCcccccChHHHHHHHHhcC-----CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI-----KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~-----~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|.     ++|.|..|++.|.....|..|++..|.+
T Consensus        10 C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A           10 CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            7899999999999999999885     7999999999999999999999656766

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=4.6e-13  Score=61.84  Aligned_cols=46  Identities=33%  Similarity=0.617  Sum_probs=43.2

Q ss_pred             CCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492           3 RLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      .|++.|.....|..|+++|.  +||.|..|++.|.....|..|+ +.|+
T Consensus        26 ~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~Ht   73 (73)
T 1f2i_G           26 SCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHT   73 (73)
T ss_dssp             TBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-TTCC
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHH-HhcC
Confidence            69999999999999999998  9999999999999999999998 6764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.7e-13  Score=66.84  Aligned_cols=49  Identities=18%  Similarity=0.308  Sum_probs=45.6

Q ss_pred             CCCCccccc-ChHHHHHHHHhcC---CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLIS-YNWCLKRHLNTHI---KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~-~~~~l~~h~~~h~---~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|. ....|..|+++|.   ++|.|.+|++.|.....|..|+ +.|.+
T Consensus        27 C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~-~~h~~   79 (98)
T 2gqj_A           27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT-MAEHS   79 (98)
T ss_dssp             CTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH-HHHSC
T ss_pred             CCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHH-HHHcC
Confidence            789999999 9999999999987   7999999999999999999999 57665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.38  E-value=4.9e-13  Score=61.62  Aligned_cols=50  Identities=22%  Similarity=0.452  Sum_probs=44.5

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCCC---ccCC--cCccccCCHHHHHHHHhhc
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHNK---RICS--KCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~--~c~~~f~~~~~l~~h~~~h   73 (85)
                      ++|.|..  |++.|.....|..|+ ..|.+   |.|+  .|++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHH-HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHH-HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            7899988  999999999999998 68877   9996  4999999999999998876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.38  E-value=1.2e-12  Score=66.35  Aligned_cols=49  Identities=18%  Similarity=0.272  Sum_probs=46.0

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |++|++.|.....|..|+++|.+||.|..|++.|...+.|..|+ +.|.+
T Consensus        77 C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~-~~h~~  125 (129)
T 2wbt_A           77 CPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHV-CKKHN  125 (129)
T ss_dssp             CTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHH-HHTTC
T ss_pred             CCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHH-HHHCC
Confidence            78999999999999999999888999999999999999999999 67765

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.37  E-value=1.6e-12  Score=63.15  Aligned_cols=59  Identities=19%  Similarity=0.530  Sum_probs=53.3

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCCC---ccCC--cCccccCCHHHHHHHHhhcc---cccCcCCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHNK---RICS--KCSFLADDQETLNEHLQQHI---FWECSFQD   82 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~--~c~~~f~~~~~l~~h~~~h~---~~~C~~~~   82 (85)
                      ++|.|..  |++.|.....|..|+ ..|.+   |.|+  .|++.|.....|..|+++|+   +|.|++..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   82 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN   82 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHH-HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred             cceEcCCCCCCCcccCHHHHHHHH-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence            7899997  999999999999999 68876   9996  69999999999999999998   79998753

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=2e-12  Score=60.26  Aligned_cols=49  Identities=24%  Similarity=0.381  Sum_probs=43.6

Q ss_pred             CCCCcccccChHHHHHHHH-hcC---CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492           1 MPRLQVLISYNWCLKRHLN-THI---KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~-~h~---~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      |++|++.|.....|..|+. .|.   ++|.|..|++.|.....|..|++..|.
T Consensus        18 C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            7899999999999999997 676   689999999999999999999943343

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.32  E-value=2.7e-12  Score=59.07  Aligned_cols=47  Identities=34%  Similarity=0.549  Sum_probs=42.6

Q ss_pred             CCC--CcccccChHHHHHHHHhcC--CCccCCC--CccccCChHHHHHHHHhhC
Q psy3492           1 MPR--LQVLISYNWCLKRHLNTHI--KPFNCAL--CEYKAARPERLATHVIKVH   48 (85)
Q Consensus         1 c~~--c~~~f~~~~~l~~h~~~h~--~~~~c~~--c~~~f~~~~~l~~h~~~~h   48 (85)
                      |+.  |++.|.....|..|+++|.  +||.|.+  |++.|.....|..|+ +.|
T Consensus        20 C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~H   72 (72)
T 2epa_A           20 CSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR-RTH   72 (72)
T ss_dssp             CSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT-TTC
T ss_pred             CCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh-hcC
Confidence            555  9999999999999999998  9999965  999999999999998 554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=8.5e-17  Score=74.42  Aligned_cols=63  Identities=19%  Similarity=0.260  Sum_probs=54.3

Q ss_pred             HHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          12 WCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        12 ~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      ..|..|+++|.  +||.|..|++.|.....|..      .. |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            34667888888  99999999999999887653      23 999999999999999999999998   799976

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.8e-12  Score=58.83  Aligned_cols=46  Identities=17%  Similarity=0.179  Sum_probs=42.5

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCC-CCccccCChHHHHHHHHhhCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCA-LCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~-~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      |+.|++.|. ...|..|+++ .  +||.|. .|++.|...+.|..|+ +.|-
T Consensus        13 C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~-~~hc   61 (66)
T 2eod_A           13 CTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHL-KDSC   61 (66)
T ss_dssp             CSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHH-HTTS
T ss_pred             ccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHH-Hhhc
Confidence            789999999 9999999999 6  999999 9999999999999999 6664

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=9.2e-12  Score=54.41  Aligned_cols=40  Identities=28%  Similarity=0.550  Sum_probs=35.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~   62 (85)
                      +||.|.+|++.|.....|..|++..|.+   |.|+.|++.|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            8899999999999999999998227877   999999999875

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.6e-12  Score=53.26  Aligned_cols=38  Identities=24%  Similarity=0.317  Sum_probs=21.9

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|.  +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCcCCCCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34454  5666666666666666666665 45554   555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.9e-12  Score=53.14  Aligned_cols=38  Identities=24%  Similarity=0.413  Sum_probs=20.8

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|.+|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            34444  5555666666666655565555 45554   555544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=1.6e-11  Score=53.63  Aligned_cols=36  Identities=17%  Similarity=0.208  Sum_probs=33.8

Q ss_pred             CCCCcccccChHHHHHHHH-hcC--CCccCCCCccccCC
Q psy3492           1 MPRLQVLISYNWCLKRHLN-THI--KPFNCALCEYKAAR   36 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~-~h~--~~~~c~~c~~~f~~   36 (85)
                      |++|++.|.....|..|++ +|.  +||.|.+|++.|.+
T Consensus        15 C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            7899999999999999997 898  99999999999975

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5e-12  Score=53.40  Aligned_cols=39  Identities=21%  Similarity=0.419  Sum_probs=22.3

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|.+|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            334454  5666666666666666666665 45554   555544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.1e-12  Score=53.10  Aligned_cols=38  Identities=24%  Similarity=0.297  Sum_probs=20.6

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            34444  5555555555555555555555 45554   555543

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.5e-12  Score=53.59  Aligned_cols=39  Identities=26%  Similarity=0.334  Sum_probs=22.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            334454  5666666666666666666665 45554   555543

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.3e-12  Score=53.33  Aligned_cols=39  Identities=21%  Similarity=0.310  Sum_probs=22.7

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|...+.|..|+ +.|.+   |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            344455  5666666666666666666665 45555   555544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.20  E-value=5.4e-12  Score=53.34  Aligned_cols=33  Identities=27%  Similarity=0.465  Sum_probs=16.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A           11 KPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5555555555555555555555 34444   444443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.3e-12  Score=53.12  Aligned_cols=33  Identities=30%  Similarity=0.471  Sum_probs=19.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|...+.|..|+ +.|.+   |.|+.|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   44 (44)
T 2emx_A            9 KPFGCSCCEKAFSSKSYLLVHQ-QTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-HHHTSSCSCSCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            5566666666666666666665 45554   555544

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.2e-12  Score=52.87  Aligned_cols=33  Identities=24%  Similarity=0.367  Sum_probs=17.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|.....|..|+ ..|.+   |.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             CCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5555555555555555555555 44544   455443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.7e-12  Score=53.22  Aligned_cols=33  Identities=27%  Similarity=0.423  Sum_probs=17.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|.....|..|+ +.|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           11 KPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             cCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            5555555555555555555554 44544   444443

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.5e-12  Score=52.71  Aligned_cols=33  Identities=24%  Similarity=0.424  Sum_probs=17.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|.+|++.|...+.|..|+ +.|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            5555555555555555555555 44544   445443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.20  E-value=5.8e-12  Score=53.20  Aligned_cols=33  Identities=24%  Similarity=0.341  Sum_probs=16.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A           11 KTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSCC
T ss_pred             cCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCCC
Confidence            5555555555555555555554 34444   444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.3e-12  Score=52.85  Aligned_cols=39  Identities=21%  Similarity=0.314  Sum_probs=22.9

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            344455  5666666666666666666666 45555   555554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.3e-12  Score=53.08  Aligned_cols=38  Identities=26%  Similarity=0.342  Sum_probs=22.4

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|..|++.|...+.|..|+ +.|.+   |.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34454  5666666666666666666665 45555   555544

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.9e-12  Score=53.41  Aligned_cols=39  Identities=18%  Similarity=0.298  Sum_probs=22.0

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|...+.|..|+ +.|.+   |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            334454  5666666666666666666665 45554   555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.1e-12  Score=53.10  Aligned_cols=33  Identities=27%  Similarity=0.474  Sum_probs=17.5

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|.+|++.|...+.|..|+ +.|.+   |.|+.|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           11 KPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5555555555555555555555 45544   555443

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=6.3e-12  Score=53.13  Aligned_cols=39  Identities=18%  Similarity=0.196  Sum_probs=22.3

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344454  5666666666666666666665 45554   555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.6e-12  Score=52.83  Aligned_cols=39  Identities=21%  Similarity=0.420  Sum_probs=21.9

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|...+.|..|+ ..|.+   |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            334444  5566666666666666666665 45554   555543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8e-12  Score=52.76  Aligned_cols=33  Identities=33%  Similarity=0.522  Sum_probs=17.1

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           11 KPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5555555555555555555555 34544   444443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.5e-12  Score=52.68  Aligned_cols=37  Identities=30%  Similarity=0.381  Sum_probs=18.9

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      +++|+  +||.|..|++.|...+.|..|+ ..|.+   |.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSS   45 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            33444  5555555555555555555555 44544   44443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=53.04  Aligned_cols=33  Identities=30%  Similarity=0.439  Sum_probs=17.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4555555555555555555555 34444   444443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.4e-12  Score=53.29  Aligned_cols=38  Identities=21%  Similarity=0.328  Sum_probs=20.8

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|.  +||.|..|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34444  5566666666666666666665 45554   555543

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.19  E-value=6e-12  Score=53.11  Aligned_cols=38  Identities=21%  Similarity=0.333  Sum_probs=21.4

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|..|++.|...+.|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            4 GSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             ccCCCCCCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34444  5566666666666666666665 45554   555544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.19  E-value=7.2e-12  Score=52.90  Aligned_cols=33  Identities=27%  Similarity=0.421  Sum_probs=17.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|.....|..|+ ..|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A           11 KRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             cCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            5555555555555555555555 44544   455443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.19  E-value=5e-12  Score=53.43  Aligned_cols=38  Identities=29%  Similarity=0.385  Sum_probs=21.3

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHH-HHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34444  5566666666666666666665 45554   555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.19  E-value=6.5e-12  Score=53.02  Aligned_cols=39  Identities=26%  Similarity=0.327  Sum_probs=23.0

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            344455  6666666666666666666665 45555   555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.6e-12  Score=53.03  Aligned_cols=39  Identities=26%  Similarity=0.297  Sum_probs=23.8

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            344455  6666666666666666666666 56655   666554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=9.1e-12  Score=52.57  Aligned_cols=38  Identities=21%  Similarity=0.247  Sum_probs=22.3

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|.+|++.|...+.|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            34455  5666666666666666666665 45555   555544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.5e-12  Score=53.07  Aligned_cols=33  Identities=30%  Similarity=0.399  Sum_probs=16.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|.....|..|+ +.|.+   |.|++|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A           11 KPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4555555555555555555554 34444   444443

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=51.99  Aligned_cols=35  Identities=23%  Similarity=0.187  Sum_probs=22.6

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34544   666667777777666777766666   666664

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.4e-12  Score=52.84  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=23.6

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|.  +||.|..|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344455  6666666666666666666666 46655   566554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=7e-12  Score=52.95  Aligned_cols=38  Identities=26%  Similarity=0.273  Sum_probs=21.4

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|.+|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 GSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CCCCCCCcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34444  5566666666666666666665 45554   555544

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.2e-12  Score=53.12  Aligned_cols=33  Identities=24%  Similarity=0.444  Sum_probs=17.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|...+.|..|+ +.|.+   |.|++|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           11 KPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCCCC
T ss_pred             CCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCCCC
Confidence            5555555555555555555555 34544   555443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=8.5e-12  Score=52.64  Aligned_cols=39  Identities=21%  Similarity=0.159  Sum_probs=22.8

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            334454  5666666666666666666666 45655   555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.5e-12  Score=52.85  Aligned_cols=38  Identities=24%  Similarity=0.368  Sum_probs=20.5

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            33444  5555555555555555555555 45554   555543

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.5e-12  Score=52.67  Aligned_cols=39  Identities=26%  Similarity=0.403  Sum_probs=22.8

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            344555  5666666666666666666665 45554   555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.4e-11  Score=52.13  Aligned_cols=33  Identities=24%  Similarity=0.365  Sum_probs=17.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHh-hCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIK-VHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~-~h~~---~~C~~c   56 (85)
                      +||.|..|++.|.....|..|+ + .|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHW-RYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHH-TTTTTTSCSSSCCCC
T ss_pred             CCEECCccCchhCChHHHHHHh-HhhcCCCCCCCCCCC
Confidence            5555555555555555555555 4 4444   444443

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.6e-12  Score=53.29  Aligned_cols=38  Identities=24%  Similarity=0.363  Sum_probs=19.7

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|..|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            4 GSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCEECSSSCCEESSHHHHHHHH-HHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCEEccccCcccCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            34444  5555555555555555555555 34444   555443

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.16  E-value=1.4e-11  Score=52.05  Aligned_cols=37  Identities=24%  Similarity=0.460  Sum_probs=21.1

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      ++|+  +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3444  5566666666666666666665 45554   555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.4e-12  Score=53.30  Aligned_cols=27  Identities=26%  Similarity=0.640  Sum_probs=13.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ ..|.+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~H~~   37 (46)
T 2emh_A           11 RPYICTVCGKAFTDRSNLIKHQ-KIHTG   37 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHH-HHHHC
T ss_pred             CCcCCCCCCchhCCHHHHHHHH-HhcCC
Confidence            4555555555555555555554 34443

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=9.1e-12  Score=52.57  Aligned_cols=38  Identities=18%  Similarity=0.069  Sum_probs=21.4

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|.+|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34444  5566666666666666666665 45554   555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.8e-12  Score=53.20  Aligned_cols=33  Identities=27%  Similarity=0.354  Sum_probs=16.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|.+|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A           11 KPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             cCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5555555555555555555555 34444   444443

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.4e-11  Score=52.00  Aligned_cols=27  Identities=37%  Similarity=0.661  Sum_probs=13.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ ..|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~   37 (46)
T 2ep3_A           11 KPYRCAECGKAFTDRSNLFTHQ-KIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-TTTTT
T ss_pred             CCeECCCCCchhCCHHHHHHHH-HHcCC
Confidence            4455555555555555555554 34443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.6e-11  Score=51.10  Aligned_cols=35  Identities=20%  Similarity=0.102  Sum_probs=22.5

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34544   666667767776666767766666   566654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.4e-11  Score=51.24  Aligned_cols=30  Identities=20%  Similarity=0.182  Sum_probs=19.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A           13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             eECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            666666666666666666666666   566654

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.4e-12  Score=52.76  Aligned_cols=24  Identities=21%  Similarity=0.419  Sum_probs=11.6

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|++.|...+.|..|+++|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytm_A           13 YKCMECGKAFGDNSSCTQHQRLHT   36 (46)
T ss_dssp             SSBTTTTBCCSSHHHHHHHHHHHH
T ss_pred             cCCCCCCchhCCHHHHHHHHHHcC
Confidence            444444444444444444444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.5e-11  Score=51.92  Aligned_cols=30  Identities=20%  Similarity=0.143  Sum_probs=18.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|+|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A           13 YECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            666666666666666666666665   566654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.5e-11  Score=51.22  Aligned_cols=34  Identities=18%  Similarity=0.124  Sum_probs=22.2

Q ss_pred             hCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          47 VHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        47 ~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      .|.+   |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4544   666667767776666767766666   666664

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.8e-12  Score=52.48  Aligned_cols=38  Identities=21%  Similarity=0.322  Sum_probs=20.6

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQ-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHH-HHHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHH-HHcCCCCCCCCCCC
Confidence            33444  5555655666666555555555 45554   555543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.8e-11  Score=51.64  Aligned_cols=30  Identities=27%  Similarity=0.181  Sum_probs=16.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A           13 YECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             eECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555555555555555555555555   455543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.8e-11  Score=51.03  Aligned_cols=30  Identities=20%  Similarity=0.203  Sum_probs=19.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A           13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             TCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             eECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            666666666666666666666666   566654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.6e-11  Score=51.14  Aligned_cols=30  Identities=20%  Similarity=0.213  Sum_probs=18.9

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A           13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            666666666666666666666665   566654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.4e-11  Score=51.33  Aligned_cols=30  Identities=20%  Similarity=0.080  Sum_probs=18.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A           13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             cCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            666666666666666666666665   566654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.13  E-value=1.8e-11  Score=51.67  Aligned_cols=30  Identities=20%  Similarity=0.120  Sum_probs=18.4

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A           13 FECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             EECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566666666666666666666665   566654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6.1e-12  Score=53.14  Aligned_cols=39  Identities=26%  Similarity=0.362  Sum_probs=23.3

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ ..|.+   |.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            344455  6666666666666666666666 45655   556554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.4e-11  Score=51.27  Aligned_cols=30  Identities=27%  Similarity=0.176  Sum_probs=17.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.||+.|...+.|..|+++|+   +|.|+.
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A           13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            555555555555555555555555   555543

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.1e-11  Score=51.45  Aligned_cols=38  Identities=18%  Similarity=0.114  Sum_probs=33.4

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcCC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSFQ   81 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~~   81 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SG-SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CC-SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CC-CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   8999863

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=51.03  Aligned_cols=37  Identities=19%  Similarity=0.122  Sum_probs=33.2

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            3 SG-SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             SS-CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             cc-cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 56776   999999999999999999999998   899986

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=51.73  Aligned_cols=30  Identities=23%  Similarity=0.193  Sum_probs=20.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A           13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             ccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            666666666666666666666666   566664

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.5e-11  Score=50.73  Aligned_cols=30  Identities=20%  Similarity=0.172  Sum_probs=18.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A           13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             eECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            666666666666666666666665   566653

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.1e-11  Score=50.91  Aligned_cols=37  Identities=16%  Similarity=0.107  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            3 SG-SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CC-cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            44 56766   999999999999999999999999   899986

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=9.9e-12  Score=52.49  Aligned_cols=33  Identities=30%  Similarity=0.416  Sum_probs=17.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|.+|++.|.....|..|+ +.|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQ-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-HHHHCCCCCCSCCC
T ss_pred             CCeECcccCchhCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            5555555555555555555555 34444   555443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.8e-11  Score=51.08  Aligned_cols=35  Identities=20%  Similarity=0.148  Sum_probs=24.9

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35555   777777777777777777777776   677765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.8e-11  Score=50.32  Aligned_cols=35  Identities=20%  Similarity=0.118  Sum_probs=31.8

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            46766   999999999999999999999998   899986

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.4e-12  Score=53.07  Aligned_cols=33  Identities=30%  Similarity=0.465  Sum_probs=17.5

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|...+.|..|+ ..|.+   |.|+.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           11 KPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             SSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             CCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            5555555555555555555555 34444   555443

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=51.29  Aligned_cols=30  Identities=23%  Similarity=0.218  Sum_probs=17.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556666666666666666666555   555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=51.26  Aligned_cols=30  Identities=20%  Similarity=0.171  Sum_probs=18.1

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A           13 YKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             EECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             eeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            566666666666666666666655   555554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.5e-11  Score=50.33  Aligned_cols=37  Identities=16%  Similarity=0.028  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            3 SG-SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CC-CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             Cc-ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.11  E-value=3.9e-11  Score=50.56  Aligned_cols=37  Identities=16%  Similarity=0.137  Sum_probs=33.0

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            3 SG-SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CC-CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             Cc-CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            45 56776   999999999999999999999998   899986

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.11  E-value=4.2e-11  Score=50.50  Aligned_cols=37  Identities=16%  Similarity=0.084  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            3 SG-SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CC-CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899975

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5e-11  Score=50.26  Aligned_cols=29  Identities=24%  Similarity=0.206  Sum_probs=17.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |.|+.|++.|...+.|..|+++|+   +|+|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A           13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666666666666666666555   55554

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4e-11  Score=50.57  Aligned_cols=30  Identities=20%  Similarity=0.191  Sum_probs=18.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A           13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             BCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            666666666666666666666665   566654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.5e-11  Score=50.41  Aligned_cols=30  Identities=20%  Similarity=0.160  Sum_probs=17.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A           13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556666666666666666666555   555553

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=50.78  Aligned_cols=30  Identities=23%  Similarity=0.194  Sum_probs=17.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A           13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             cCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555555555555555555555555   555543

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.8e-11  Score=51.08  Aligned_cols=37  Identities=19%  Similarity=0.107  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            3 SG-SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             cc-cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.7e-11  Score=50.60  Aligned_cols=37  Identities=16%  Similarity=0.140  Sum_probs=33.0

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CS-SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CC-CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 56776   999999999999999999999999   899986

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.10  E-value=3.2e-11  Score=49.85  Aligned_cols=24  Identities=25%  Similarity=0.474  Sum_probs=13.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~   34 (42)
T 2el5_A           11 YECSECGKAFNRKDQLISHQRTHA   34 (42)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGC
T ss_pred             ccCCCcChhhCCHHHHHHHHHhcC
Confidence            555555555555555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5e-11  Score=50.18  Aligned_cols=37  Identities=16%  Similarity=0.022  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            3 SG-SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CC-CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             Cc-cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899975

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.3e-11  Score=50.12  Aligned_cols=37  Identities=16%  Similarity=0.110  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            3 SG-SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SS-CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CC-cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899976

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.2e-11  Score=50.80  Aligned_cols=30  Identities=20%  Similarity=0.231  Sum_probs=17.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A           13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555556666666555666655555   555553

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.2e-11  Score=50.18  Aligned_cols=35  Identities=23%  Similarity=0.142  Sum_probs=31.8

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.|++.|...+.|..|+++|+   +|+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46766   999999999999999999999998   899986

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.7e-11  Score=50.04  Aligned_cols=37  Identities=19%  Similarity=0.040  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            3 SG-SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CC-CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CC-CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 56766   999999999999999999999998   899986

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=6.7e-11  Score=49.62  Aligned_cols=34  Identities=26%  Similarity=0.713  Sum_probs=22.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCS   57 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~   57 (85)
                      +||.|..|++.|.....|..|+ +.|.+   |.|+.||
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            9 KPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSEETTTTEECSCHHHHHHHH-HHHSCCCCCCCCCCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHH-HHccCCCCCCCcCCC
Confidence            6666666666666666666666 46655   6666664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.8e-11  Score=49.03  Aligned_cols=24  Identities=25%  Similarity=0.483  Sum_probs=13.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~   34 (42)
T 2yte_A           11 YSCAECKETFSDNNRLVQHQKMHT   34 (42)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             eECCCCCCccCCHHHHHHHHHHhC
Confidence            555555555555555555555555

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.2e-11  Score=50.86  Aligned_cols=30  Identities=23%  Similarity=0.204  Sum_probs=16.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A           13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             EECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555555555555555555555554   455543

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.2e-11  Score=50.87  Aligned_cols=37  Identities=16%  Similarity=0.159  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            3 SG-SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             Cc-ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.10  E-value=4e-11  Score=50.55  Aligned_cols=37  Identities=16%  Similarity=0.154  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            3 SG-SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SC-SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             Cc-cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.4e-11  Score=50.09  Aligned_cols=37  Identities=19%  Similarity=0.065  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            3 SG-SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CC-CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CC-CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            44 56766   999999999999999999999999   899986

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=8.2e-11  Score=50.07  Aligned_cols=35  Identities=20%  Similarity=0.196  Sum_probs=27.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSF   58 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~   58 (85)
                      ++|.|.+|++.|.....|..|+ +.|.+   |.|++||+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            6788888888888888888887 67776   77877764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.3e-11  Score=50.77  Aligned_cols=30  Identities=27%  Similarity=0.267  Sum_probs=16.9

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A           13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             EECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            555555555555555555555555   555543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3e-11  Score=50.96  Aligned_cols=39  Identities=26%  Similarity=0.383  Sum_probs=33.7

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            556777  8999999999999999999999 68887   888754

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.7e-11  Score=50.08  Aligned_cols=35  Identities=17%  Similarity=0.149  Sum_probs=31.8

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46776   999999999999999999999998   899976

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.7e-11  Score=50.30  Aligned_cols=37  Identities=19%  Similarity=0.105  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            3 SG-SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CC-CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             cc-CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            45 56776   999999999999999999999999   899976

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=51.06  Aligned_cols=37  Identities=22%  Similarity=0.176  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            3 SG-SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CC-CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=50.58  Aligned_cols=37  Identities=16%  Similarity=0.062  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            3 SG-SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CC-CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.8e-11  Score=50.14  Aligned_cols=35  Identities=23%  Similarity=0.051  Sum_probs=31.6

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46666   999999999999999999999998   899976

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.5e-11  Score=50.38  Aligned_cols=37  Identities=16%  Similarity=0.125  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            3 SG-SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             cc-cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=5.9e-11  Score=50.52  Aligned_cols=32  Identities=19%  Similarity=0.219  Sum_probs=30.2

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCcc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEY   32 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~   32 (85)
                      |++|++.|.....|..|+++|+  +||.|.+|++
T Consensus        15 C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           15 CEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            6899999999999999999999  9999999985

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.2e-11  Score=50.48  Aligned_cols=37  Identities=16%  Similarity=0.084  Sum_probs=32.7

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            3 SG-SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CC-cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 46666   999999999999999999999998   899986

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.4e-11  Score=49.36  Aligned_cols=28  Identities=18%  Similarity=0.242  Sum_probs=16.1

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWEC   78 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C   78 (85)
                      |.|+.||+.|...+.|..|+++|+   +|.|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A           13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             eECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            555555555555555555555555   4554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.08  E-value=4e-11  Score=50.50  Aligned_cols=37  Identities=19%  Similarity=0.053  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            3 SG-SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CC-CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             cc-cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.6e-11  Score=50.06  Aligned_cols=37  Identities=22%  Similarity=0.087  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            3 SG-SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             SS-SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CC-CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899975

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.08  E-value=3.8e-11  Score=50.66  Aligned_cols=37  Identities=19%  Similarity=0.075  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ ++|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            3 SG-SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CC-CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.4e-11  Score=50.39  Aligned_cols=37  Identities=16%  Similarity=0.071  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|++   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            3 SG-SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             Cc-CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.8e-11  Score=50.31  Aligned_cols=37  Identities=19%  Similarity=0.120  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            3 SG-SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             Cc-CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.4e-11  Score=50.18  Aligned_cols=39  Identities=18%  Similarity=0.272  Sum_probs=34.4

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            456777  9999999999999999999999 68877   888876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.7e-11  Score=49.79  Aligned_cols=37  Identities=16%  Similarity=0.061  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            3 SG-SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CC-CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=50.76  Aligned_cols=29  Identities=28%  Similarity=0.313  Sum_probs=16.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |.|+.||+.|...+.|..|+++|+   +|.|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A           13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             eECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555555555555555555555555   55554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.8e-11  Score=50.62  Aligned_cols=37  Identities=16%  Similarity=0.090  Sum_probs=32.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            3 SG-SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             cc-cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45 56776   999999999999999999999998   899986

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.07  E-value=1e-11  Score=54.24  Aligned_cols=44  Identities=11%  Similarity=0.181  Sum_probs=24.2

Q ss_pred             ccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           6 VLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         6 ~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +.|.....|..|+++|+  +||.|..|++.|...+.|..|+ .+|.+
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~   49 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHL-ELRHF   49 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHH-HHHTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHH-HHhcc
Confidence            44555555555555555  5555555555555555555555 44443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.9e-11  Score=50.26  Aligned_cols=35  Identities=17%  Similarity=0.010  Sum_probs=31.7

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46666   999999999999999999999999   899986

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.7e-11  Score=50.66  Aligned_cols=37  Identities=22%  Similarity=0.179  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            3 SG-SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CC-CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CC-CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            45 56776   999999999999999999999998   899976

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.4e-11  Score=50.15  Aligned_cols=38  Identities=21%  Similarity=0.338  Sum_probs=33.3

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            566777  9999999999999999999999 78987   88864

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.5e-11  Score=50.10  Aligned_cols=37  Identities=24%  Similarity=0.178  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            3 SG-SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CC-CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             Cc-cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            44 56766   999999999999999999999998   899986

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.7e-11  Score=49.86  Aligned_cols=38  Identities=24%  Similarity=0.345  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            556777  9999999999999999999999 78987   88763

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.3e-11  Score=49.71  Aligned_cols=38  Identities=21%  Similarity=0.329  Sum_probs=33.2

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCCC
Confidence            556777  9999999999999999999999 78987   88864

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=7.9e-11  Score=49.59  Aligned_cols=35  Identities=14%  Similarity=0.013  Sum_probs=31.8

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            46776   999999999999999999999999   899986

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.8e-11  Score=49.54  Aligned_cols=24  Identities=21%  Similarity=0.458  Sum_probs=12.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eoj_A           13 YECCECGKVFSRKDQLVSHQKTHS   36 (44)
T ss_dssp             CEETTTTEECSSHHHHHHHHTTSS
T ss_pred             eeCCCCCCccCCHHHHHHHHHHcC
Confidence            445555555555555555544444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.06  E-value=6.6e-11  Score=48.87  Aligned_cols=37  Identities=19%  Similarity=0.422  Sum_probs=31.5

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+++|+  +||.|..|++.|...+.|..|+ ..|.+   |.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQ-RTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHH-GGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHH-HhcCCCCCCCCC
Confidence            345677  8999999999999999999999 78887   7663

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.9e-11  Score=49.27  Aligned_cols=24  Identities=21%  Similarity=0.412  Sum_probs=12.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~   36 (44)
T 2eof_A           13 YECNECQKAFNTKSNLMVHQRTHT   36 (44)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHTT
T ss_pred             eECCCCCcccCCHhHHHHHHHHhC
Confidence            445555555555555555554444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.05  E-value=6.6e-11  Score=49.82  Aligned_cols=37  Identities=16%  Similarity=-0.005  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            3 SG-SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             SC-CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CC-CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999999   899976

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.1e-11  Score=49.95  Aligned_cols=37  Identities=16%  Similarity=0.102  Sum_probs=33.1

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            3 SG-SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             ST-TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             cc-cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 57777   999999999999999999999998   899976

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.4e-11  Score=49.52  Aligned_cols=38  Identities=24%  Similarity=0.325  Sum_probs=33.0

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            556777  8999999999999999999999 78987   88763

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.4e-11  Score=50.11  Aligned_cols=35  Identities=20%  Similarity=0.129  Sum_probs=31.7

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            46766   999999999999999999999999   899976

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.3e-11  Score=50.14  Aligned_cols=37  Identities=16%  Similarity=0.123  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ ++|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 h~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            3 SG-SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CS-CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CC-CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.1e-11  Score=49.92  Aligned_cols=37  Identities=16%  Similarity=0.076  Sum_probs=32.8

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            3 SG-SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             Cc-ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899976

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.1e-11  Score=49.80  Aligned_cols=38  Identities=24%  Similarity=0.370  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ +.|.+   |.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCCC
Confidence            456777  9999999999999999999998 78987   88864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.2e-11  Score=49.54  Aligned_cols=38  Identities=24%  Similarity=0.349  Sum_probs=33.0

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCCC
Confidence            556777  9999999999999999999999 78987   88763

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=49.09  Aligned_cols=37  Identities=16%  Similarity=0.046  Sum_probs=32.7

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHh-hcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQ-QHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~-~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|++ +|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            3 SG-SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cc-cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999 998   899976

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.7e-11  Score=49.35  Aligned_cols=38  Identities=24%  Similarity=0.405  Sum_probs=33.2

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            556777  9999999999999999999999 78987   88864

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7.8e-11  Score=49.59  Aligned_cols=37  Identities=16%  Similarity=0.086  Sum_probs=32.7

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            3 SG-SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CC-CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             cc-ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899975

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=2.7e-10  Score=47.32  Aligned_cols=29  Identities=21%  Similarity=0.323  Sum_probs=19.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A           11 FFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             EECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            666666666666666666666666   56665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8e-11  Score=49.58  Aligned_cols=33  Identities=24%  Similarity=0.467  Sum_probs=17.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|..|++.|.....|..|+ +.|.+   |.|+.|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            5555555555555555555555 45544   555443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7.6e-11  Score=49.65  Aligned_cols=38  Identities=26%  Similarity=0.431  Sum_probs=33.2

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            566777  9999999999999999999998 78887   88764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.1e-11  Score=49.41  Aligned_cols=38  Identities=16%  Similarity=0.297  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQ-RIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHH-GGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHH-hHhCCCCCCCCCC
Confidence            566777  9999999999999999999999 78887   87763

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=49.14  Aligned_cols=35  Identities=20%  Similarity=0.083  Sum_probs=31.7

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46766   999999999999999999999998   899976

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.04  E-value=5.8e-11  Score=50.05  Aligned_cols=38  Identities=32%  Similarity=0.456  Sum_probs=33.0

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHH-HHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            566777  8999999999999999999999 68887   88864

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.04  E-value=1.6e-11  Score=53.61  Aligned_cols=43  Identities=16%  Similarity=0.277  Sum_probs=38.3

Q ss_pred             ccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          31 EYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        31 ~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++.|.....|..|+ +.|.+   |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~k~~~~~~~l~~h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   48 (54)
T 1yui_A            3 AKRAKHPPGTEKPR-SRSQSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCCCSCSSCCCCCH-HHHTSSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcchhhHH-HhcCCCCCccCCCCCcccCCHHHHHHHHHHhc
Confidence            45677788888898 68887   999999999999999999999998

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.6e-11  Score=49.44  Aligned_cols=38  Identities=24%  Similarity=0.373  Sum_probs=33.0

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHH-HTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            556777  8999999999999999999999 78987   88764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7.9e-11  Score=49.59  Aligned_cols=35  Identities=20%  Similarity=0.183  Sum_probs=31.7

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|+|++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56766   999999999999999999999998   899975

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=48.23  Aligned_cols=36  Identities=28%  Similarity=0.474  Sum_probs=30.8

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC   53 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C   53 (85)
                      |+++|.  +||.|..|++.|...+.|..|+ ..|.+   |.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHH-HHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            345677  8999999999999999999999 68887   665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.2e-10  Score=47.71  Aligned_cols=30  Identities=20%  Similarity=0.182  Sum_probs=21.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A           13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             cCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            677777777777777777777776   677764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=6e-11  Score=50.01  Aligned_cols=38  Identities=18%  Similarity=0.291  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHR-RSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHH-HHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            566777  9999999999999999999999 68887   88864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=49.16  Aligned_cols=38  Identities=21%  Similarity=0.387  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            566777  8999999999999999999999 78887   88863

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.03  E-value=1.1e-12  Score=58.98  Aligned_cols=48  Identities=15%  Similarity=0.291  Sum_probs=38.9

Q ss_pred             HHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHH
Q psy3492          15 KRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETL   66 (85)
Q Consensus        15 ~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l   66 (85)
                      ..|+++|+  +||.|..|++.|.....|.    ..|.+   |.|+.||+.|...+.+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCccc
Confidence            34667787  9999999999999988775    36776   9999999999876543

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.6e-11  Score=49.17  Aligned_cols=37  Identities=22%  Similarity=0.454  Sum_probs=32.3

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ ..|.+   |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQ-KTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHH-TTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            566777  9999999999999999999999 78887   7763

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1e-10  Score=49.29  Aligned_cols=29  Identities=21%  Similarity=0.230  Sum_probs=15.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A           13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555555555555555555555554   45554

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=49.15  Aligned_cols=38  Identities=24%  Similarity=0.334  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            566777  9999999999999999999999 78887   88763

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.1e-11  Score=49.75  Aligned_cols=38  Identities=26%  Similarity=0.426  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQ-KTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHH-HHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            566777  8999999999999999999999 68887   88864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.2e-11  Score=49.50  Aligned_cols=38  Identities=21%  Similarity=0.333  Sum_probs=33.2

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCCC
Confidence            566777  8999999999999999999998 78987   88764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.6e-11  Score=49.36  Aligned_cols=38  Identities=26%  Similarity=0.422  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            566777  9999999999999999999998 78887   88764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.7e-11  Score=49.27  Aligned_cols=29  Identities=21%  Similarity=0.215  Sum_probs=16.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |.|+.||+.|...+.|..|+++|+   +|.|+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A           13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             SEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             eECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555555555555555555555555   45554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.9e-11  Score=49.63  Aligned_cols=27  Identities=30%  Similarity=0.594  Sum_probs=13.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ ..|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~   37 (46)
T 2yto_A           11 KPYKCSDCGKAFTRKSGLHIHQ-QSHTG   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHTC
T ss_pred             CCEECcccCCccCCHhHHHHHH-HHcCC
Confidence            4455555555555555555554 34443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3.8e-11  Score=50.60  Aligned_cols=37  Identities=16%  Similarity=0.134  Sum_probs=32.7

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            3 SG-SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             cC-cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   899986

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=49.15  Aligned_cols=38  Identities=24%  Similarity=0.400  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            556777  9999999999999999999999 78887   88763

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.4e-10  Score=48.35  Aligned_cols=28  Identities=21%  Similarity=0.252  Sum_probs=16.9

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWEC   78 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C   78 (85)
                      |.|+.||+.|...+.|..|+++|+   +|+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A           13 SECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            566666666666666666666655   4555

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8e-11  Score=49.55  Aligned_cols=38  Identities=24%  Similarity=0.308  Sum_probs=32.9

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHH-HHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHH-HHcCCCCCCCCCC
Confidence            556777  8999999999999999999999 68887   88763

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.2e-10  Score=48.52  Aligned_cols=37  Identities=19%  Similarity=0.319  Sum_probs=32.2

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCCC
Confidence            566777  8999999999999999999999 78887   7763

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.8e-11  Score=49.48  Aligned_cols=35  Identities=17%  Similarity=0.121  Sum_probs=31.5

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            46666   999999999999999999999998   899976

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=48.43  Aligned_cols=37  Identities=19%  Similarity=0.384  Sum_probs=32.2

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQ-RTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHH-HHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHH-HHhCCCCCCCCC
Confidence            566777  8999999999999999999999 78887   7763

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=48.94  Aligned_cols=38  Identities=21%  Similarity=0.338  Sum_probs=32.8

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            456777  8999999999999999999999 68887   88763

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.6e-11  Score=49.50  Aligned_cols=37  Identities=22%  Similarity=0.151  Sum_probs=32.2

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|+-
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            3 SG-SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CC-CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             cc-cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            44 56776   999999999999999999999998   888873

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1e-10  Score=48.77  Aligned_cols=27  Identities=26%  Similarity=0.522  Sum_probs=13.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ ..|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~   37 (44)
T 2emb_A           11 KRYECSKCQATFNLRKHLIQHQ-KTHAA   37 (44)
T ss_dssp             SSEECTTTCCEESCHHHHHHHG-GGGCC
T ss_pred             CCeECCCCCCccCCHHHHHHHH-HHcCC
Confidence            4445555555555544454444 34443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.7e-11  Score=49.50  Aligned_cols=30  Identities=23%  Similarity=0.187  Sum_probs=17.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A           13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             TCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556666666666666666666555   555553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.7e-10  Score=47.49  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=32.9

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      ++|.  +||.|.+|++.|.....|..|+ +.|.+   |.|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4576  9999999999999999999999 78876   899876

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8e-11  Score=49.55  Aligned_cols=38  Identities=24%  Similarity=0.394  Sum_probs=32.8

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|.  +||.|..|++.|.....|..|+ +.|.+   |.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHH-HHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            566777  8999999999999999999999 68877   88864

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.7e-11  Score=50.31  Aligned_cols=37  Identities=16%  Similarity=0.115  Sum_probs=32.7

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|++
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            3 SG-SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CC-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44 46766   999999999999999999999998   899986

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.2e-10  Score=48.55  Aligned_cols=27  Identities=26%  Similarity=0.675  Sum_probs=14.6

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ ..|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~   37 (44)
T 2yu5_A           11 NPFKCSKCDRVFTQRNYLVQHE-RTHAR   37 (44)
T ss_dssp             CSEECSSSSCEESSSHHHHHHH-HHCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHh-HhcCC
Confidence            5555555555555555555555 45544

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.9e-10  Score=47.63  Aligned_cols=29  Identities=21%  Similarity=0.216  Sum_probs=16.4

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |.|+.|++.|.....|..|+++|+   +|.|+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A           13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             ccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            555555555555555555555555   45554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.5e-10  Score=48.78  Aligned_cols=38  Identities=24%  Similarity=0.427  Sum_probs=32.6

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|.+|++.|.....|..|+ +.|.+   |.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            445677  8999999999999999999998 78987   87763

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=48.63  Aligned_cols=38  Identities=24%  Similarity=0.357  Sum_probs=33.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            566777  9999999999999999999999 78987   87753

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.8e-10  Score=47.59  Aligned_cols=24  Identities=29%  Similarity=0.461  Sum_probs=12.4

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        12 ~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2eos_A           12 YPCEICGTRFRHLQTLKSHLRIHT   35 (42)
T ss_dssp             BCCSSSCCCBSSHHHHHHHTTTTS
T ss_pred             EECCCCCCccCCHHHHHHHHHhcC
Confidence            455555555555555555555444

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.6e-10  Score=48.14  Aligned_cols=36  Identities=19%  Similarity=0.169  Sum_probs=31.1

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |+ +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SG-SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CS-CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             Cc-cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            44 46766   999999999999999999999998   78874

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=49.15  Aligned_cols=37  Identities=24%  Similarity=0.455  Sum_probs=32.6

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHL-RVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHH-HHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            566777  9999999999999999999999 68887   8776

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.98  E-value=1.9e-10  Score=47.41  Aligned_cols=24  Identities=17%  Similarity=0.369  Sum_probs=12.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        12 ~~C~~C~k~f~~~~~l~~H~~~H~   35 (42)
T 2epc_A           12 YLCGQCGKSFTQRGSLAVHQRSCS   35 (42)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTT
T ss_pred             eECCCCCcccCCHHHHHHHhhhcC
Confidence            445555555555555555554444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.6e-10  Score=48.21  Aligned_cols=36  Identities=19%  Similarity=0.176  Sum_probs=31.2

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SG-SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CC-SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cc-cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            44 46766   999999999999999999999998   78885

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=49.22  Aligned_cols=29  Identities=24%  Similarity=0.211  Sum_probs=15.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |.|+.|++.|...+.|..|+++|+   +|.|+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             eeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555555555555555555555554   45553

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=47.96  Aligned_cols=24  Identities=21%  Similarity=0.438  Sum_probs=13.1

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        12 ~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2ytb_A           12 YRCDQCGKAFSQKGSLIVHIRVHT   35 (42)
T ss_dssp             BCCTTTTCCBSSHHHHHTTGGGTS
T ss_pred             eeCCCccchhCCHHHHHHHHHHhC
Confidence            555555555555555555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.9e-10  Score=47.45  Aligned_cols=36  Identities=19%  Similarity=0.489  Sum_probs=30.5

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC   53 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C   53 (85)
                      |+++|.  +||.|..|++.|...+.|..|+ +.|.+   |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHT-TTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHH-HhcCCCCCCCC
Confidence            445677  8999999999999999999998 78876   554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.7e-10  Score=46.65  Aligned_cols=35  Identities=17%  Similarity=0.051  Sum_probs=31.2

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|+.|++.|...+.|..|+++|+   +|.|++
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            35555   999999999999999999999999   899986

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.96  E-value=2.4e-10  Score=47.08  Aligned_cols=36  Identities=17%  Similarity=0.292  Sum_probs=30.4

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC   53 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C   53 (85)
                      |+++|+  +||.|..|++.|...+.|..|+ +.|.+   |.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ-RSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHH-HHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHh-hhcCCCCCCCC
Confidence            345677  8999999999999999999999 68877   654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=6.5e-10  Score=46.52  Aligned_cols=31  Identities=10%  Similarity=-0.027  Sum_probs=29.2

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCE   31 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~   31 (85)
                      |++|++.|.....|..|+++|+  ++|.|..||
T Consensus        13 C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A           13 CPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             ETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            6899999999999999999999  999999986

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.1e-10  Score=49.13  Aligned_cols=38  Identities=26%  Similarity=0.467  Sum_probs=32.4

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      |+++|.  +||.|..|++.|.....|..|+ ..|.+   |.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHL-RLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHH-HHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            556777  8999999999999999999999 68876   77763

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.2e-10  Score=47.25  Aligned_cols=37  Identities=14%  Similarity=0.150  Sum_probs=31.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+++|.  +||.|.+|++.|.....|..|+ +.|.+   |.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCCC
Confidence            345677  8999999999999999999999 68887   7763

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.5e-10  Score=47.79  Aligned_cols=24  Identities=21%  Similarity=0.324  Sum_probs=13.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        12 ~~C~~C~k~f~~~~~L~~H~~~H~   35 (42)
T 2en2_A           12 YKCETCGARFVQVAHLRAHVLIHT   35 (42)
T ss_dssp             EECTTTCCEESSHHHHHHHTHHHH
T ss_pred             EeCCCcChhhCCHHHHHHHHHHcC
Confidence            555555555555555555555554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.7e-10  Score=47.56  Aligned_cols=36  Identities=22%  Similarity=0.440  Sum_probs=30.9

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC   53 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C   53 (85)
                      |+++|+  +||.|..|++.|...+.|..|+ ..|.+   |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            456777  9999999999999999999998 78877   554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5e-10  Score=46.69  Aligned_cols=27  Identities=26%  Similarity=0.503  Sum_probs=13.1

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|.+|++.|...+.|..|+ ..|.+
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~H~~   37 (44)
T 2epv_A           11 KPYECNECGKAFIWKSLLIVHE-RTHAG   37 (44)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-GGGSS
T ss_pred             cCeECCCCCcccCchHHHHHHH-hHhcC
Confidence            4455555555555555555554 34443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=3.7e-10  Score=47.49  Aligned_cols=31  Identities=26%  Similarity=0.455  Sum_probs=17.9

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +++|.  +||.|..|++.|.....|..|+ +.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~   36 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHE-RIHT   36 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHH-TTCC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHH-HHcC
Confidence            34454  5666666666666666666665 4554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.1e-10  Score=47.11  Aligned_cols=33  Identities=30%  Similarity=0.592  Sum_probs=18.8

Q ss_pred             CCccCC--CCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492          23 KPFNCA--LCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus        23 ~~~~c~--~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      +||.|.  .|++.|.....|..|+ +.|.+   |.|+.|
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            556665  5666666666666665 45554   555543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1e-09  Score=44.98  Aligned_cols=24  Identities=21%  Similarity=0.353  Sum_probs=12.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|++.|...+.|..|+++|+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~   34 (41)
T 2ept_A           11 YECQECGKSFRQKGSLTLHERIHT   34 (41)
T ss_dssp             EECSSSCCEESSHHHHHHHGGGCC
T ss_pred             eECCCCCCCcCCHHHHHHHHHHhC
Confidence            455555555555555555555554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.4e-10  Score=48.78  Aligned_cols=37  Identities=24%  Similarity=0.394  Sum_probs=32.1

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      |+++|+  +||.|..|++.|.....|..|+ ..|.+   |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHH-HHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            566777  9999999999999999999999 68876   7775

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6e-10  Score=46.42  Aligned_cols=35  Identities=14%  Similarity=-0.008  Sum_probs=29.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccC
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWEC   78 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C   78 (85)
                      |+ +.|.+   |.|++|++.|...+.|..|+++|+   +|.|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SG-SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CC-CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CC-cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            44 56776   999999999999999999999998   6655

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.8e-10  Score=47.51  Aligned_cols=36  Identities=22%  Similarity=0.435  Sum_probs=30.2

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC   53 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C   53 (85)
                      |+++|+  +||.|..|++.|.....|..|+ +.|.+   |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV-LIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHT-HHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHH-HHcCCCCCCCC
Confidence            455677  8999999999999999999998 68876   554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=6.7e-10  Score=46.68  Aligned_cols=35  Identities=23%  Similarity=0.170  Sum_probs=30.2

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc----cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI----FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~----~~~C~~   80 (85)
                      +.|.+   |.|+.||+.|...+.|..|+++|+    +|.|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46766   999999999999999999999986    577764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.5e-10  Score=48.22  Aligned_cols=27  Identities=33%  Similarity=0.625  Sum_probs=13.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|.+|++.|.....|..|+ ..|.+
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~-~~H~~   37 (44)
T 2eox_A           11 KSYNCNECGKAFTRIFHLTRHQ-KIHTR   37 (44)
T ss_dssp             CCEEETTTTEEESSSHHHHTTH-HHHCC
T ss_pred             CCeECcccCcccCCHHHHHHHH-HHhCC
Confidence            4555555555555555555554 34443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.86  E-value=2.3e-09  Score=44.40  Aligned_cols=35  Identities=17%  Similarity=0.265  Sum_probs=29.6

Q ss_pred             hcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          20 THI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        20 ~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      +|+  +||.|..|++.|.....|..|+ ..|.+   |.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccCCC
Confidence            455  8999999999999999999998 68877   77753

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7e-10  Score=46.40  Aligned_cols=35  Identities=29%  Similarity=0.519  Sum_probs=30.6

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      .+|+  +||.|..|++.|.....|..|+ +.|.+   |.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCC
Confidence            3566  8999999999999999999999 78887   7775

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=4.3e-12  Score=58.30  Aligned_cols=50  Identities=14%  Similarity=0.113  Sum_probs=44.0

Q ss_pred             CCCCcccccChHHHHHHHHhcCCCccCCCCccccCChHHHHHHHHhhCCC---ccCCcC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHIKPFNCALCEYKAARPERLATHVIKVHNK---RICSKC   56 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c   56 (85)
                      |++|++.|.....|..     .++|.|..|++.|.....|..|+ ..|.+   |.|+.|
T Consensus        21 C~~C~k~f~~~~~l~~-----~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           21 CSKCGIIFIRRSTLSR-----RKTPMCEKCRKDSCQEAALNKDE-GNESGKKTSGPSSG   73 (73)
T ss_dssp             CSSSCCEEECCCCCCC-----SSSCCCHHHHHTCSCCCSSCCCS-SCCCCCCCSSCCCC
T ss_pred             CCcccchhCCHHHhCc-----CCCCCCCCCChhhcCHHHHHHHH-HhhcCCCCCCCCCC
Confidence            7899999988877755     47899999999999999999998 78887   899876

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.6e-10  Score=47.49  Aligned_cols=36  Identities=14%  Similarity=0.074  Sum_probs=30.9

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCc
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECS   79 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~   79 (85)
                      |+ +.|.+   |.|+.||+.|...+.|..|+++|+   +|.|.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SG-SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CC-CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CC-cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44 46766   999999999999999999999998   78874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.84  E-value=1.4e-09  Score=43.48  Aligned_cols=22  Identities=41%  Similarity=0.834  Sum_probs=11.9

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +||.|..|++.|.....|..|+
T Consensus        10 k~~~C~~C~k~f~~~~~l~~H~   31 (37)
T 1p7a_A           10 KPFQCPDCDRSFSRSDHLALHR   31 (37)
T ss_dssp             SSBCCTTTCCCBSSHHHHHHHH
T ss_pred             CCccCCCCCcccCcHHHHHHHH
Confidence            4555555555555555555554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.6e-09  Score=45.48  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=30.0

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      ++|.  +||.|..|++.|.....|..|+ +.|.+   |.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCC
Confidence            4566  8999999999999999999998 68887   7775

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=7.6e-11  Score=54.89  Aligned_cols=57  Identities=18%  Similarity=0.231  Sum_probs=47.2

Q ss_pred             HHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          14 LKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        14 l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |..|+.+|.  +|+.|..|++.|. ...|..|+  .+.+   +.|+.|++.|.. ..|..|+++|+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~   66 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE--DYCGARTELCGNCGRNVLV-KDLKTHPEVCG   66 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH--HHHHHCEEECSSSCCEEET-TGGGTHHHHBT
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH--hHcCCCceEcccCCCcCcH-HHHHHHHHHcc
Confidence            455666666  9999999999995 88899997  4555   899999998885 78999999887

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.4e-09  Score=42.72  Aligned_cols=33  Identities=15%  Similarity=0.331  Sum_probs=28.4

Q ss_pred             hcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccC
Q psy3492          20 THI--KPFNCALCEYKAARPERLATHVIKVHNK---RIC   53 (85)
Q Consensus        20 ~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C   53 (85)
                      +|+  +||.|..|++.|.....|..|+ ..|.+   |.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            466  8999999999999999999998 78887   654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.77  E-value=4.1e-09  Score=42.06  Aligned_cols=29  Identities=17%  Similarity=0.338  Sum_probs=26.2

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +.|.+   |.|+.|++.|...+.|..|+++|+
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            46766   999999999999999999999886

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=8.8e-09  Score=43.39  Aligned_cols=35  Identities=17%  Similarity=0.215  Sum_probs=30.9

Q ss_pred             hhCCC---ccCC--cCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICS--KCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~--~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      +.|.+   |.|.  .|++.|...+.|..|+++|+   +|+|++
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            35665   9998  89999999999999999998   899975

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.68  E-value=1.4e-08  Score=37.65  Aligned_cols=23  Identities=30%  Similarity=0.572  Sum_probs=12.6

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|+.||+.|...+.|..|+++|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            4 FSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHC
T ss_pred             ccCCCcChhhCCHHHHHHHHHHc
Confidence            44555555555555555555554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.67  E-value=2.5e-08  Score=38.88  Aligned_cols=26  Identities=27%  Similarity=0.681  Sum_probs=12.9

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      ||.|.+|++.|...+.|..|+ .+|++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~-~~H~~   27 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHI-TLHEL   27 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHH-HHHTT
T ss_pred             cccCCCCCchhCCHHHHHHHH-HHhCC
Confidence            445555555555555555554 34443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.67  E-value=2.3e-08  Score=38.98  Aligned_cols=24  Identities=21%  Similarity=0.405  Sum_probs=19.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhC
Confidence            677888888888888888888776

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.66  E-value=2.1e-08  Score=40.44  Aligned_cols=24  Identities=25%  Similarity=0.401  Sum_probs=11.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         7 ~~C~~C~k~f~~~~~L~~H~~~H~   30 (39)
T 1njq_A            7 YTCSFCKREFRSAQALGGHMNVHR   30 (39)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcC
Confidence            444445555555444545544444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=6.4e-09  Score=41.63  Aligned_cols=21  Identities=24%  Similarity=0.642  Sum_probs=12.0

Q ss_pred             CCccCCCCccccCChHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATH   43 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h   43 (85)
                      +||.|..|++.|...+.|..|
T Consensus         8 k~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            8 HLYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             CEEECSSSSCEEECHHHHHHH
T ss_pred             cCeECCCCCcccCCHHHHHHH
Confidence            555555555555555555555

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=1.3e-08  Score=37.84  Aligned_cols=23  Identities=17%  Similarity=0.424  Sum_probs=11.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|+.||+.|...+.|..|+++|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            4 YRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             EEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhc
Confidence            34444555555555555554444

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=8.9e-09  Score=41.04  Aligned_cols=24  Identities=13%  Similarity=0.375  Sum_probs=11.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A           10 YSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHHC
T ss_pred             cCCCCCCCccCCHHHHHHHHHHHc
Confidence            444445555555555555544443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.63  E-value=2.9e-08  Score=36.59  Aligned_cols=24  Identities=21%  Similarity=0.358  Sum_probs=16.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            567777777777777777776664

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.63  E-value=3.2e-09  Score=47.45  Aligned_cols=37  Identities=14%  Similarity=0.170  Sum_probs=32.1

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERL   40 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l   40 (85)
                      |++||+.|.....|.   ++|.  +||.|..|++.|....++
T Consensus        17 C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A           17 CPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             CCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            789999999988886   7788  999999999999876653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.62  E-value=2.6e-08  Score=39.98  Aligned_cols=20  Identities=25%  Similarity=0.506  Sum_probs=11.2

Q ss_pred             ccCCcCccccCCHHHHHHHH
Q psy3492          51 RICSKCSFLADDQETLNEHL   70 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~   70 (85)
                      |.|++||++|.+.+.|..|+
T Consensus         9 ~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CEETTTTEECSCHHHHHHHH
T ss_pred             eECCCCCCccCCHhHccCcC
Confidence            55555555555555555554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.62  E-value=3.9e-08  Score=38.59  Aligned_cols=22  Identities=27%  Similarity=0.629  Sum_probs=11.6

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +||.|..|++.|...+.|..|+
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~   27 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHL   27 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHH
T ss_pred             cCeeCCCCCcccCCHHHHHHHH
Confidence            4555555555555555555554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.62  E-value=3e-08  Score=38.86  Aligned_cols=22  Identities=36%  Similarity=0.653  Sum_probs=11.2

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +||.|..|++.|...+.|..|+
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~   27 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHI   27 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH
T ss_pred             CCeECCCCcchhCCHHHHHHHH
Confidence            4455555555555555555554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.61  E-value=4.3e-08  Score=36.47  Aligned_cols=25  Identities=28%  Similarity=0.800  Sum_probs=14.0

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      ||.|..|++.|.....|..|+ +.|.
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~-~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHY-RVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHH-TTSC
T ss_pred             CccCCCCCcccCCHHHHHHHH-HhcC
Confidence            455555555555555555555 4443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.61  E-value=3.2e-08  Score=38.84  Aligned_cols=24  Identities=21%  Similarity=0.393  Sum_probs=23.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         8 ~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            8 FVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGT
T ss_pred             eeCCCCCcccCCHHHHHHHHHHcC
Confidence            899999999999999999999987

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.61  E-value=3.7e-08  Score=41.73  Aligned_cols=27  Identities=26%  Similarity=0.562  Sum_probs=19.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHh-hCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIK-VHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~-~h~~   50 (85)
                      +||.|.+|++.|.....|..|+ + .|.+
T Consensus         6 kp~~C~~C~k~F~~~~~L~~H~-~~~H~~   33 (48)
T 3iuf_A            6 KPYACDICGKRYKNRPGLSYHY-AHSHLA   33 (48)
T ss_dssp             SCEECTTTCCEESSHHHHHHHH-HHSSCC
T ss_pred             cCEECCCcCcccCCHHHHHHHh-hhhcCC
Confidence            6777777777777777777776 5 6665

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.61  E-value=4e-08  Score=38.47  Aligned_cols=24  Identities=17%  Similarity=0.289  Sum_probs=22.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         8 ~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            8 YVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTS
T ss_pred             eECCCCcchhCCHHHHHHHHHHHc
Confidence            899999999999999999999886

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.4e-08  Score=39.70  Aligned_cols=31  Identities=16%  Similarity=0.535  Sum_probs=27.1

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      ++|+  +||.|..|++.|.....|..|+ ..|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHI-KTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHH-HHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHH-HHHcC
Confidence            3566  8999999999999999999999 67764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=4e-08  Score=39.86  Aligned_cols=26  Identities=31%  Similarity=0.722  Sum_probs=13.1

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..  |++.|..++.|..|+ ++|+
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~-r~Ht   35 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHL-KVHT   35 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHH-HHHS
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHH-HhcC
Confidence            4555543  555555555555554 3443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.58  E-value=6.6e-08  Score=38.93  Aligned_cols=27  Identities=22%  Similarity=0.715  Sum_probs=23.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|...+.|..|+ ..|.+
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~-~~H~~   31 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHM-NVHRR   31 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCC
T ss_pred             CceECCCCCcccCCHHHHHHHH-HHcCC
Confidence            7889999999999999999998 68876

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=6.3e-08  Score=38.15  Aligned_cols=24  Identities=25%  Similarity=0.466  Sum_probs=13.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|++.|.....|..|+++|+
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A           10 HLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             eecCcCCCCcCchHHHHHHHHHhc
Confidence            555555555555555555555553

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=1.1e-07  Score=43.08  Aligned_cols=27  Identities=26%  Similarity=0.427  Sum_probs=18.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ ++|++
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~-r~Htg   38 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHE-AQHGV   38 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHH-HHHTT
T ss_pred             cCcCCCCCCCccCCHHHHHhhh-hhhCC
Confidence            6667777777777777777776 56665

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=4.3e-08  Score=38.72  Aligned_cols=26  Identities=27%  Similarity=0.507  Sum_probs=13.7

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..|++.|...+.|..|+ +.|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~-~~H~   33 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHM-LVHG   33 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-TTTS
T ss_pred             CCeECCCCCCccCCHHHHHHHH-HHhc
Confidence            4555555555555555555555 3443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.1e-08  Score=39.82  Aligned_cols=24  Identities=29%  Similarity=0.643  Sum_probs=22.8

Q ss_pred             ccCCc--CccccCCHHHHHHHHhhcc
Q psy3492          51 RICSK--CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.  |++.|...+.|..|+++|+
T Consensus        10 ~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A           10 LKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             EECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            89986  9999999999999999997

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=5.4e-08  Score=38.44  Aligned_cols=26  Identities=42%  Similarity=0.959  Sum_probs=13.6

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..|++.|.....|..|+ +.|.
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~-~~H~   33 (36)
T 2elq_A            8 KPFKCSLCEYATRSKSNLKAHM-NRHS   33 (36)
T ss_dssp             CSEECSSSSCEESCHHHHHHHH-HHSS
T ss_pred             CCccCCCCCchhCCHHHHHHHH-HHhc
Confidence            4555555555555555555555 3443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=5.1e-08  Score=36.11  Aligned_cols=26  Identities=23%  Similarity=0.669  Sum_probs=22.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..|++.|...+.|..|+ +.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHM-RGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHH-TTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHH-HhcC
Confidence            5889999999999999999998 6663

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=4.5e-08  Score=36.40  Aligned_cols=24  Identities=21%  Similarity=0.361  Sum_probs=22.6

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            4 YSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             EECSSSCCEESCHHHHHHHHTTSC
T ss_pred             ccCCCCCcccCCHHHHHHHHHhcC
Confidence            789999999999999999999885

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.55  E-value=7.5e-08  Score=35.53  Aligned_cols=26  Identities=31%  Similarity=0.816  Sum_probs=21.6

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..|++.|...+.|..|+ +.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHL-RTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-HHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHH-HHcc
Confidence            5788999999999999999888 5663

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=7.3e-08  Score=38.04  Aligned_cols=24  Identities=17%  Similarity=0.236  Sum_probs=22.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|++.|...+.|..|+++|+
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A           10 YDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTS
T ss_pred             eECCCCCCccCCHHHHHHHHHHhc
Confidence            899999999999999999999886

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.54  E-value=6e-08  Score=36.28  Aligned_cols=24  Identities=29%  Similarity=0.697  Sum_probs=13.2

Q ss_pred             CccCCCCccccCChHHHHHHHHhhC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      ||.|..|++.|...+.|..|+ ..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H   25 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHI-LLH   25 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHH-TGG
T ss_pred             CccCCCCCchhCCHHHHHHHH-HHh
Confidence            455555555555555555555 344

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=8.7e-08  Score=37.81  Aligned_cols=24  Identities=25%  Similarity=0.624  Sum_probs=22.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|++.|...+.|..|+++|+
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A           10 FKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             EECSSSSCEESCHHHHHHHHHHSS
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhc
Confidence            899999999999999999999886

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=5.2e-08  Score=38.40  Aligned_cols=22  Identities=36%  Similarity=0.883  Sum_probs=11.1

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +||.|..|++.|.....|..|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~   29 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHL   29 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHH
Confidence            4455555555555555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=9.6e-09  Score=37.76  Aligned_cols=23  Identities=22%  Similarity=0.585  Sum_probs=11.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|+.||+.|...+.|..|+++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            34445555555555555554444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=1.5e-07  Score=43.04  Aligned_cols=19  Identities=26%  Similarity=0.188  Sum_probs=9.2

Q ss_pred             CccccCCHHHHHHHH-hhcc
Q psy3492          56 CSFLADDQETLNEHL-QQHI   74 (85)
Q Consensus        56 c~~~f~~~~~l~~h~-~~h~   74 (85)
                      ||++|.+.+.|..|+ ++|+
T Consensus        35 CgKaFsr~s~L~~H~rriHT   54 (73)
T 1x3c_A           35 CFAAFTIQQNLILHYQAVHK   54 (73)
T ss_dssp             CCCBCSSHHHHHHHHHHHSS
T ss_pred             cChhHcCHHHHHHHhhhhCC
Confidence            555555555555553 3444

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.53  E-value=8.3e-08  Score=35.82  Aligned_cols=24  Identities=29%  Similarity=0.555  Sum_probs=14.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             eECCCCCcccCCHHHHHHHHHHhc
Confidence            456666666666666666666554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=5.4e-08  Score=38.81  Aligned_cols=28  Identities=25%  Similarity=0.562  Sum_probs=25.2

Q ss_pred             hCCC---ccCCcCccccCCHHHHHHH-Hhhcc
Q psy3492          47 VHNK---RICSKCSFLADDQETLNEH-LQQHI   74 (85)
Q Consensus        47 ~h~~---~~C~~c~~~f~~~~~l~~h-~~~h~   74 (85)
                      .|.+   |.|+.||+.|...+.|..| +++|+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            4665   9999999999999999999 88886

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.53  E-value=8.9e-08  Score=35.73  Aligned_cols=27  Identities=33%  Similarity=0.698  Sum_probs=22.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ ..|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHH-HHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHH-HHhcC
Confidence            5788999999999999999998 56653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.52  E-value=6.3e-08  Score=40.97  Aligned_cols=24  Identities=21%  Similarity=0.433  Sum_probs=23.4

Q ss_pred             ccCCcCccccCCHHHHHHHHh-hcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQ-QHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~-~h~   74 (85)
                      |.|..||+.|.....|..|++ +|+
T Consensus         8 ~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            8 YACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             EECCCcCcccCCHHHHHHHhhhhcC
Confidence            999999999999999999999 998

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.51  E-value=1.4e-07  Score=35.91  Aligned_cols=25  Identities=32%  Similarity=0.792  Sum_probs=12.2

Q ss_pred             CccCC--CCccccCChHHHHHHHHhhCC
Q psy3492          24 PFNCA--LCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        24 ~~~c~--~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      ||.|.  .|++.|...+.|..|+ +.|+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~-~~H~   28 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHK-RTHT   28 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHH-TTTS
T ss_pred             CcCCcCCCCCcccCCHhHHHHHH-HHhc
Confidence            44454  4555555555555554 3443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=7.3e-08  Score=37.95  Aligned_cols=24  Identities=33%  Similarity=0.700  Sum_probs=22.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|++.|...+.|..|+++|+
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A           10 YKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCcccCCHHHHHHHHHHcc
Confidence            899999999999999999999886

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=1.2e-07  Score=35.57  Aligned_cols=21  Identities=24%  Similarity=0.702  Sum_probs=11.4

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||.|..|++.|.....|..|+
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~   23 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHL   23 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHH
Confidence            455555555555555555555

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.8e-08  Score=39.13  Aligned_cols=22  Identities=18%  Similarity=0.694  Sum_probs=11.5

Q ss_pred             CCccCCCCccccCCh-HHHHHHH
Q psy3492          23 KPFNCALCEYKAARP-ERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~-~~l~~h~   44 (85)
                      +||.|..|++.|... +.|..|+
T Consensus         8 k~~~C~~C~k~f~~~~~~L~~H~   30 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNGSDLQRHI   30 (37)
T ss_dssp             CCEECSSSSCEECSSCHHHHHHH
T ss_pred             CCeECCCCChhhccCHHHHHHHH
Confidence            455555555555555 5555554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.50  E-value=1.2e-07  Score=34.82  Aligned_cols=26  Identities=31%  Similarity=0.727  Sum_probs=20.2

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      ||.|..|++.|.....|..|+ +.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~-~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQ-RVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHG-GGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHH-HHcCC
Confidence            578888888888888888887 67653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.1e-07  Score=37.42  Aligned_cols=27  Identities=26%  Similarity=0.454  Sum_probs=24.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|.+|++.|.....|..|+ +.|.+
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHK-LLHTA   34 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHH-HHHSS
T ss_pred             CCeecCcCCCCcCchHHHHHHH-HHhcC
Confidence            8999999999999999999998 67754

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.49  E-value=6.2e-08  Score=36.24  Aligned_cols=24  Identities=21%  Similarity=0.322  Sum_probs=22.6

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGG
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhc
Confidence            689999999999999999999986

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=2.6e-07  Score=41.86  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=25.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc--cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI--FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~--~~~C~~   80 (85)
                      |.|.+|++.|...+.|..|+++|+  ...+.+
T Consensus        14 y~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~   45 (66)
T 2epp_A           14 LPCGLCGKVFTDANRLRQHEAQHGVTSLQLGY   45 (66)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCS
T ss_pred             cCCCCCCCccCCHHHHHhhhhhhCCCcccccc
Confidence            899999999999999999999998  344444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.1e-07  Score=37.47  Aligned_cols=22  Identities=27%  Similarity=0.517  Sum_probs=11.2

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +||.|..|++.|.....|..|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~   29 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHL   29 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH
T ss_pred             CCEECCCCCceeCCHHHHHHHH
Confidence            4455555555555555555554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.4e-07  Score=37.17  Aligned_cols=24  Identities=25%  Similarity=0.466  Sum_probs=22.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|++.|...+.|..|+++|+
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A           10 FTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHC
T ss_pred             EECCCCCceeCCHHHHHHHHHHhC
Confidence            899999999999999999999886

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=4.7e-08  Score=38.85  Aligned_cols=28  Identities=21%  Similarity=0.406  Sum_probs=24.6

Q ss_pred             hCCC---ccCCcCccccCCH-HHHHHHHhhcc
Q psy3492          47 VHNK---RICSKCSFLADDQ-ETLNEHLQQHI   74 (85)
Q Consensus        47 ~h~~---~~C~~c~~~f~~~-~~l~~h~~~h~   74 (85)
                      +|.+   |.|+.|++.|... +.|..|+++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            4555   8999999999999 99999999886

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.46  E-value=1.2e-07  Score=35.57  Aligned_cols=24  Identities=25%  Similarity=0.375  Sum_probs=22.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|.....|..|+++|+
T Consensus         4 ~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            4 YQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             EECTTTCCEESCHHHHHHHHHTTC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhc
Confidence            789999999999999999999886

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.46  E-value=1.8e-07  Score=35.57  Aligned_cols=24  Identities=21%  Similarity=0.455  Sum_probs=22.4

Q ss_pred             ccCC--cCccccCCHHHHHHHHhhcc
Q psy3492          51 RICS--KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~--~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+  .||+.|...+.|..|+++|+
T Consensus         3 ~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            3 FMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             cCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            6887  99999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=9.8e-08  Score=35.56  Aligned_cols=21  Identities=24%  Similarity=0.600  Sum_probs=10.4

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||.|..|++.|.....|..|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~   22 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHL   22 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHH
Confidence            444555555555555554444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=1.8e-07  Score=35.20  Aligned_cols=20  Identities=30%  Similarity=0.715  Sum_probs=11.7

Q ss_pred             CccCCCCccccCChHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATH   43 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h   43 (85)
                      ||.|..|++.|...+.|..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHH
Confidence            55555555555555555555

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=8.6e-08  Score=35.69  Aligned_cols=21  Identities=24%  Similarity=0.540  Sum_probs=11.3

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||.|..|++.|.....|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~   22 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHL   22 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHH
Confidence            455555555555555555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=9.6e-08  Score=35.60  Aligned_cols=24  Identities=25%  Similarity=0.443  Sum_probs=22.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|.....|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHHHhc
Confidence            789999999999999999999886

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.43  E-value=1.6e-07  Score=35.21  Aligned_cols=24  Identities=25%  Similarity=0.587  Sum_probs=15.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHc
Confidence            556666666666666666666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=2.7e-08  Score=36.48  Aligned_cols=25  Identities=32%  Similarity=0.778  Sum_probs=20.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      +||.|..|++.|...+.|..|+ +.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~-~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHI-RHH   25 (26)
Confidence            5788999999999988888887 565

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=3.9e-07  Score=41.68  Aligned_cols=33  Identities=21%  Similarity=0.462  Sum_probs=28.2

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCCC---ccCCc
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHNK---RICSK   55 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~~---~~C~~   55 (85)
                      +||.|..  |+++|...+.|..|++++|++   +.|.+
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            9999975  999999999999997458998   66643

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.42  E-value=2.2e-08  Score=47.83  Aligned_cols=51  Identities=16%  Similarity=0.403  Sum_probs=40.3

Q ss_pred             HhcC--CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          19 NTHI--KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        19 ~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .+|+  +||.|..|++.|.....|..|+ +.|.+   |.|..|.    ....|..|+++|.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~   73 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHL-NIHNEEFQKRAKRQE----RRKQLLSKQKYAD   73 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHH-HHHHHHHHHHCCCCS----CCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHH-HHhCCCCCcccchhh----hHHHHHhhhcccc
Confidence            4566  8999999999999999999998 68887   8887654    3445556777776

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=7.2e-08  Score=44.68  Aligned_cols=46  Identities=20%  Similarity=0.213  Sum_probs=39.5

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |+.|++.| ....|..|+ .|.  +|+.|..|++.|.. ..|..|+ .++.+
T Consensus        20 C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~-~~c~~   67 (75)
T 2d9k_A           20 CQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHP-EVCGR   67 (75)
T ss_dssp             CSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHH-HHBTT
T ss_pred             CcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHH-HHccC
Confidence            78899999 489999999 777  99999999998874 7899998 67765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.41  E-value=3.1e-07  Score=35.10  Aligned_cols=21  Identities=29%  Similarity=0.653  Sum_probs=10.2

Q ss_pred             CccCC--CCccccCChHHHHHHH
Q psy3492          24 PFNCA--LCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~--~c~~~f~~~~~l~~h~   44 (85)
                      ||.|.  .|++.|...+.|..|+
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~   25 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHK   25 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHH
T ss_pred             CCcCcCCCCCCccCCHHHHHHHH
Confidence            44444  4455554444444444

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.41  E-value=1e-07  Score=35.47  Aligned_cols=24  Identities=29%  Similarity=0.570  Sum_probs=22.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhc
Confidence            789999999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.40  E-value=2.5e-07  Score=34.40  Aligned_cols=25  Identities=24%  Similarity=0.503  Sum_probs=13.1

Q ss_pred             CccCC--CCccccCChHHHHHHHHhhCC
Q psy3492          24 PFNCA--LCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        24 ~~~c~--~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      ||.|.  .|++.|...+.|..|+ +.|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~-~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHK-KIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHH-GGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHH-HHhC
Confidence            45555  5555555555555555 3443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.40  E-value=2.4e-07  Score=34.66  Aligned_cols=27  Identities=33%  Similarity=0.835  Sum_probs=22.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|...+.|..|+ ..|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHI-KTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHH-HHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHH-HHHcc
Confidence            5788999999999999999998 56643

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.38  E-value=2.2e-07  Score=37.17  Aligned_cols=28  Identities=29%  Similarity=0.570  Sum_probs=24.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCCccCCc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNKRICSK   55 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~~~C~~   55 (85)
                      +||.|..|+++|..++.|..|+ .    |.|.+
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~-p----y~C~~   34 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQ-A----YYCSH   34 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHH-H----HTSTT
T ss_pred             cCeECCCCCCccCCHhHccCcC-C----eECcC
Confidence            8999999999999999999998 4    66643

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4.1e-08  Score=36.84  Aligned_cols=21  Identities=29%  Similarity=0.689  Sum_probs=10.6

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||.|..|++.|...+.|..|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~   22 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHV   22 (29)
Confidence            444555555555555555554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4.2e-08  Score=36.82  Aligned_cols=24  Identities=25%  Similarity=0.433  Sum_probs=22.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            789999999999999999999886

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.37  E-value=3e-07  Score=35.15  Aligned_cols=24  Identities=21%  Similarity=0.303  Sum_probs=22.6

Q ss_pred             ccCC--cCccccCCHHHHHHHHhhcc
Q psy3492          51 RICS--KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~--~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+  .||+.|...+.|..|+++|+
T Consensus         4 ~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            4 YSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            7898  89999999999999999986

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.36  E-value=2.2e-07  Score=34.58  Aligned_cols=24  Identities=29%  Similarity=0.607  Sum_probs=22.2

Q ss_pred             ccCC--cCccccCCHHHHHHHHhhcc
Q psy3492          51 RICS--KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~--~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+  .||+.|...+.|..|+++|+
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            6788  99999999999999999885

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=2.7e-07  Score=34.62  Aligned_cols=24  Identities=21%  Similarity=0.353  Sum_probs=22.0

Q ss_pred             ccCCcCccccCCHHHHHHH-Hhhcc
Q psy3492          51 RICSKCSFLADDQETLNEH-LQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h-~~~h~   74 (85)
                      |.|+.||+.|...+.|..| +++|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             cCCcccCcccCChHHHHHHHHHHcc
Confidence            7899999999999999999 67876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=1.7e-07  Score=44.73  Aligned_cols=35  Identities=17%  Similarity=0.195  Sum_probs=30.5

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      ..|.+   |.|+.|++.|...+.|..|+++|+   +|+|.-
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~   58 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR   58 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch
Confidence            35665   999999999999999999999998   788854

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=8e-08  Score=36.17  Aligned_cols=24  Identities=25%  Similarity=0.530  Sum_probs=14.9

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            456666666666666666666554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.62  E-value=8.9e-08  Score=36.03  Aligned_cols=27  Identities=37%  Similarity=0.810  Sum_probs=22.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..|++.|.....|..|+ +.|.+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHV-RIHTG   28 (30)
Confidence            4788999999999999999998 56653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=5.1e-07  Score=35.91  Aligned_cols=24  Identities=21%  Similarity=0.477  Sum_probs=12.5

Q ss_pred             ccCC--cCccccCCHHHHHHHHhhcc
Q psy3492          51 RICS--KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~--~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|.  .||+.|...+.|..|+++|+
T Consensus         7 ~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            7 FLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             EECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             eECCCCCCCcccCCHHHHHHHHHHhC
Confidence            4455  35555555555555555544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.25  E-value=2.2e-08  Score=38.72  Aligned_cols=21  Identities=29%  Similarity=0.757  Sum_probs=10.4

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||.|..|++.|...+.|..|+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~   22 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHI   22 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSST
T ss_pred             CCCCCCCCcccCCHHHHHHHH
Confidence            444555555555544444444

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.25  E-value=5.8e-07  Score=35.65  Aligned_cols=23  Identities=30%  Similarity=0.618  Sum_probs=11.1

Q ss_pred             ccCC--cCccccCCHHHHHHHHhhc
Q psy3492          51 RICS--KCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~--~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|.  .||+.|...+.|..|+++|
T Consensus         9 ~~C~~~~C~k~f~~~~~L~~H~~~H   33 (37)
T 1va1_A            9 HICHIQGCGKVYGKTSHLRAHLRWH   33 (37)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHhc
Confidence            4444  2555555555555554444

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.24  E-value=6.2e-07  Score=35.57  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=23.4

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..  |++.|...+.|..|+ +.|++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~   35 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHL-RWHTG   35 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHHT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHH-HhcCC
Confidence            8999984  999999999999998 67754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.23  E-value=2.1e-08  Score=38.83  Aligned_cols=24  Identities=17%  Similarity=0.396  Sum_probs=22.9

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||+.|...+.|..|+++|+
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHc
Confidence            789999999999999999999988

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.17  E-value=9.4e-07  Score=35.09  Aligned_cols=27  Identities=33%  Similarity=0.626  Sum_probs=22.2

Q ss_pred             CCccCC--CCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCA--LCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~--~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|.  .|++.|...+.|..|+ +.|.+
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~   33 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHK-HKHEM   33 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHH-HHHHT
T ss_pred             cceECCCCCCCcccCCHHHHHHHH-HHhCC
Confidence            788898  5999999999999988 67654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.05  E-value=2.4e-07  Score=38.89  Aligned_cols=22  Identities=27%  Similarity=0.576  Sum_probs=11.2

Q ss_pred             CCccCC--CCccccCChHHHHHHH
Q psy3492          23 KPFNCA--LCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~--~c~~~f~~~~~l~~h~   44 (85)
                      +||.|.  .|++.|...+.|..|+
T Consensus        17 k~~~C~~~~C~k~F~~~~~L~~H~   40 (47)
T 1ncs_A           17 KTFECLFPGCTKTFKRRYNIRSHI   40 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHH
T ss_pred             CCeECCCCCCCCccCCHHHHHHHH
Confidence            455553  3555555555555554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.02  E-value=7.1e-08  Score=40.57  Aligned_cols=29  Identities=17%  Similarity=0.298  Sum_probs=25.2

Q ss_pred             hhCCC---ccCC--cCccccCCHHHHHHHHhhcc
Q psy3492          46 KVHNK---RICS--KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        46 ~~h~~---~~C~--~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ..|.+   |.|+  .||+.|...+.|..|+++|+
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            35666   9995  79999999999999999986

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.90  E-value=7.2e-05  Score=33.48  Aligned_cols=43  Identities=30%  Similarity=0.610  Sum_probs=22.4

Q ss_pred             CccccCChHHHHHHHHhhCCC---------ccCC--cCccccCCHHHHHHHHhh
Q psy3492          30 CEYKAARPERLATHVIKVHNK---------RICS--KCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        30 c~~~f~~~~~l~~h~~~~h~~---------~~C~--~c~~~f~~~~~l~~h~~~   72 (85)
                      |++.|.....|..|+...|.+         |.|.  .|++.+.....|..|+++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            555555555555554223432         4453  566666666666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.84  E-value=7.2e-05  Score=33.49  Aligned_cols=44  Identities=23%  Similarity=0.463  Sum_probs=37.8

Q ss_pred             CCCcccccChHHHHHHHH-hcC--C------CccCC--CCccccCChHHHHHHHH
Q psy3492           2 PRLQVLISYNWCLKRHLN-THI--K------PFNCA--LCEYKAARPERLATHVI   45 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~h~~-~h~--~------~~~c~--~c~~~f~~~~~l~~h~~   45 (85)
                      ..|++.|.....|..|+. .|.  +      +|.|.  .|+..+.....|..|++
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            469999999999999985 786  4      68897  69999888899999984

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.32  E-value=0.00025  Score=29.66  Aligned_cols=21  Identities=29%  Similarity=0.610  Sum_probs=16.5

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |.|+.|+..|.....|+.|++
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            778888888888878877775

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.94  E-value=0.00027  Score=35.71  Aligned_cols=24  Identities=21%  Similarity=0.376  Sum_probs=19.9

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|..|++.|.+.+.|..|+++..
T Consensus        51 fyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           51 HRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             SEETTTTEECSSHHHHHHHTTCHH
T ss_pred             eEcccCcchhCCHHHHHHHHhhhh
Confidence            888889999999999988887543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.82  E-value=0.0012  Score=27.58  Aligned_cols=19  Identities=21%  Similarity=0.321  Sum_probs=13.3

Q ss_pred             CCCCcccccChHHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLN   19 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~   19 (85)
                      ||.|+..|.....|+.||.
T Consensus        15 CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           15 CPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CTTTCCCCSSHHHHHHHHH
T ss_pred             CCcccccccchHHHHhhhh
Confidence            6667777777777777765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.52  E-value=0.00089  Score=33.81  Aligned_cols=22  Identities=23%  Similarity=0.348  Sum_probs=21.2

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +||.|..|++.|.....|..|+
T Consensus        49 kpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           49 GLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             GCSEETTTTEECSSHHHHHHHT
T ss_pred             cceEcccCcchhCCHHHHHHHH
Confidence            8999999999999999999997

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.48  E-value=0.0065  Score=30.70  Aligned_cols=21  Identities=14%  Similarity=0.400  Sum_probs=19.4

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |-|..|+..|.+...+..|..
T Consensus        94 ~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           94 KCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TEETTTTEECSSHHHHHHHHT
T ss_pred             eEcCCCCCEeCCHHHHHHHHC
Confidence            779999999999999999976

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.32  E-value=0.0033  Score=31.81  Aligned_cols=44  Identities=14%  Similarity=0.229  Sum_probs=36.3

Q ss_pred             CCCCcccccChHHHHHHHH--hcC---------------------------------CCccCCCCccccCChHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLN--THI---------------------------------KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~--~h~---------------------------------~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      |..|...|.+...+..|..  .|.                                 ..+-|.+|+..|.....+..|.
T Consensus        35 C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           35 CKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAESHY  113 (127)
T ss_dssp             ETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHHHHH
T ss_pred             CcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHHHHH
Confidence            6789999999998888872  231                                 3567999999999999999997

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.78  E-value=0.0062  Score=23.74  Aligned_cols=21  Identities=24%  Similarity=0.485  Sum_probs=19.5

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |.|+.|.+.|.+...|..|-.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHH
Confidence            889999999999999999976

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=94.29  E-value=0.0091  Score=27.81  Aligned_cols=12  Identities=17%  Similarity=0.144  Sum_probs=9.3

Q ss_pred             ccCCcCccccCC
Q psy3492          51 RICSKCSFLADD   62 (85)
Q Consensus        51 ~~C~~c~~~f~~   62 (85)
                      |+||.||..|-.
T Consensus        52 FkCP~CgEEFyG   63 (95)
T 2k5c_A           52 FKCPVCGEEFYG   63 (95)
T ss_dssp             EECTTTCCEEET
T ss_pred             hcCCCccHHHhc
Confidence            899999876643

>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}

Probab=92.77  E-value=0.057  Score=24.64  Aligned_cols=31  Identities=23%  Similarity=0.507  Sum_probs=23.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..||+.-         +.+...| |.|..|++.|+.
T Consensus        25 ~ky~C~fCgk~~---------vkR~a~GIW~C~~C~~~~AG   56 (72)
T 3jyw_9           25 ARYDCSFCGKKT---------VKRGAAGIWTCSCCKKTVAG   56 (72)
T ss_dssp             SCBCCSSCCSSC---------BSBCSSSCBCCSSSCCCCCC
T ss_pred             cCccCCCCCCce---------eEecCCCeEECCCCCCEEeC
Confidence            679999999762         1245667 999999988764

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.49  E-value=0.066  Score=24.84  Aligned_cols=39  Identities=18%  Similarity=0.298  Sum_probs=27.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCH
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQ   63 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~   63 (85)
                      .-|.|+.||..+..+ .+..|. ..-.+   |.|..|++.|...
T Consensus         9 V~F~C~~Cgd~lKK~-kv~~H~-~~Cr~~~~~SCIDC~~~F~~~   50 (79)
T 1wjv_A            9 VFFTCNACGESVKKI-QVEKHV-SNCRNCECLSCIDCGKDFWGD   50 (79)
T ss_dssp             CEEEESSSCCEEETT-HHHHHH-HHCTTCCEEEETTTTEEEEGG
T ss_pred             eEEEcCCCCCeeecc-cchhHH-hhCCCCCcEEecccCCeeCCC
Confidence            457888898776655 577887 34333   8888898888753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.76  E-value=0.15  Score=26.72  Aligned_cols=68  Identities=13%  Similarity=0.134  Sum_probs=46.6

Q ss_pred             CCcccccChHHHHHHHHhcC-CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492           3 RLQVLISYNWCLKRHLNTHI-KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus         3 ~c~~~f~~~~~l~~h~~~h~-~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .|+.... ...+..|...=. .+..|..|+..+ ....|..|+ ...=.   -.|+.|+..+... .+..|..+++
T Consensus        89 GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~-~~~C~~r~~~C~~C~~~~~~~-~l~~H~~~~~  160 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHI-LKDCPRRQVSCDNCAASMAFE-DKEIHDQNCP  160 (170)
T ss_dssp             TCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHH-HHTCTTCEEECTTTCCEEEGG-GHHHHHTTCC
T ss_pred             CCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHh-hhhCCCCCeECCCCCCccCHH-HHHhHHHhCc
Confidence            4555443 456778864323 788899998877 455688887 33322   5689999887665 5789988776

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.62  E-value=0.16  Score=19.86  Aligned_cols=21  Identities=29%  Similarity=0.471  Sum_probs=13.2

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      +.|..|+-.|.....+..|.+
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhe
Confidence            456666666666666666653

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=91.35  E-value=0.043  Score=22.00  Aligned_cols=22  Identities=32%  Similarity=0.557  Sum_probs=15.4

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      +.|+.||+.+... ....|..-|
T Consensus        10 ~~C~~C~~~i~~~-~~~EH~D~H   31 (39)
T 2i5o_A           10 VPCEKCGSLVPVW-DMPEHMDYH   31 (39)
T ss_dssp             EECTTTCCEEEGG-GHHHHHHHH
T ss_pred             cccccccCcCCcc-cccchhhHH
Confidence            7788888877763 456776655

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=90.89  E-value=0.19  Score=18.59  Aligned_cols=21  Identities=38%  Similarity=0.721  Sum_probs=16.2

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      +.|+.|.........+..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            578888888888888877754

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=89.83  E-value=0.41  Score=18.17  Aligned_cols=25  Identities=24%  Similarity=0.529  Sum_probs=18.4

Q ss_pred             CccCCCCccccCChHHHHHHHHhhC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      ...|..|.+.++.-.+|..|++..|
T Consensus         9 kqhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3457888888888888888885444

>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...

Probab=89.40  E-value=0.057  Score=23.23  Aligned_cols=14  Identities=21%  Similarity=0.747  Sum_probs=10.5

Q ss_pred             CccCCCCccccCCh
Q psy3492          24 PFNCALCEYKAARP   37 (85)
Q Consensus        24 ~~~c~~c~~~f~~~   37 (85)
                      .|.|.+||..+...
T Consensus         3 ~y~C~vCGyvYd~~   16 (54)
T 4rxn_A            3 KYTCTVCGYIYDPE   16 (54)
T ss_dssp             CEEETTTCCEECTT
T ss_pred             ceECCCCCeEECCC
Confidence            57899998877653

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=89.15  E-value=0.17  Score=23.97  Aligned_cols=21  Identities=29%  Similarity=0.534  Sum_probs=16.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ..|-+||+.|..   |.+|+.++.
T Consensus        22 iiClecGK~fK~---LkRHL~~~h   42 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHH   42 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTT
T ss_pred             eEecccchhhHH---HHHHHHHcc
Confidence            578999999984   679999853

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=89.14  E-value=0.24  Score=26.72  Aligned_cols=23  Identities=35%  Similarity=0.566  Sum_probs=18.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |+|..||+ +....++..|++.|.
T Consensus       155 YKCe~CgK-YvDId~~~~Hlk~Hg  177 (226)
T 2czr_A          155 YKCEECGK-YVDIENLEAHLREHG  177 (226)
T ss_dssp             EECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             EehhhcCc-eecHHHHHHHHHHcC
Confidence            78999997 566677889999876

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=88.58  E-value=0.066  Score=22.24  Aligned_cols=36  Identities=17%  Similarity=0.491  Sum_probs=18.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCCccCCcCcc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNKRICSKCSF   58 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~~~C~~c~~   58 (85)
                      +.|.|.+||..+.....-..-....-..|.|+.||.
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~   38 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGV   38 (46)
T ss_dssp             CCEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCC
T ss_pred             CEEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCC
Confidence            357888998877643110000001111188999874

>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...

Probab=88.33  E-value=0.076  Score=24.92  Aligned_cols=31  Identities=16%  Similarity=0.396  Sum_probs=21.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..||+....         +.-.| |.|+.||+.|..
T Consensus        26 ~~y~Cp~CG~~~v~---------r~atGiW~C~~Cg~~~ag   57 (83)
T 1vq8_Z           26 EDHACPNCGEDRVD---------RQGTGIWQCSYCDYKFTG   57 (83)
T ss_dssp             SCEECSSSCCEEEE---------EEETTEEEETTTCCEEEC
T ss_pred             ccCcCCCCCCccee---------ccCCCeEECCCCCCEecC
Confidence            68999999975222         23455 999999887654

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=88.25  E-value=0.17  Score=21.73  Aligned_cols=20  Identities=25%  Similarity=0.529  Sum_probs=18.1

Q ss_pred             ccCCCCccccCChHHHHHHH
Q psy3492          25 FNCALCEYKAARPERLATHV   44 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~   44 (85)
                      -+|..|+..|....+++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            68999999999999999887

>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=87.90  E-value=0.07  Score=25.03  Aligned_cols=31  Identities=26%  Similarity=0.569  Sum_probs=23.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..||+.-         +.+...| |.|..|++.|+.
T Consensus        34 ~ky~CpfCGk~~---------vkR~a~GIW~C~kCg~~~AG   65 (83)
T 3j21_i           34 QKHTCPVCGRKA---------VKRISTGIWQCQKCGATFAG   65 (83)
T ss_dssp             SCBCCSSSCSSC---------EEEEETTEEEETTTCCEEEC
T ss_pred             cccCCCCCCCce---------eEecCcCeEEcCCCCCEEeC
Confidence            689999999762         1245677 999999887753

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=87.10  E-value=0.55  Score=25.75  Aligned_cols=24  Identities=25%  Similarity=0.378  Sum_probs=20.2

Q ss_pred             ccCCcCccccCC-HHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADD-QETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~-~~~l~~h~~~h~   74 (85)
                      .+|..||+.|.+ -..|+.|+..|-
T Consensus       170 L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          170 LKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             CBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             ceeCCCCchhhcccHHHHHHHHHHH
Confidence            789999999987 888999987653

>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*

Probab=87.00  E-value=0.079  Score=24.24  Aligned_cols=32  Identities=19%  Similarity=0.750  Sum_probs=22.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCCH
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADDQ   63 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~~   63 (85)
                      ..+.|..||+.     .+    .+.-.| |.|..|++.|..-
T Consensus        26 ~ky~C~fCgk~-----~v----kR~a~GIW~C~~C~~~~AGG   58 (73)
T 1ffk_W           26 KKYKCPVCGFP-----KL----KRASTSIWVCGHCGYKIAGG   58 (73)
T ss_pred             cCccCCCCCCc-----ee----EEEEeEEEECCCCCcEEECC
Confidence            67899999864     22    145566 9999999887643

>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A

Probab=86.50  E-value=0.13  Score=21.89  Aligned_cols=13  Identities=23%  Similarity=0.782  Sum_probs=9.8

Q ss_pred             CccCCCCccccCC
Q psy3492          24 PFNCALCEYKAAR   36 (85)
Q Consensus        24 ~~~c~~c~~~f~~   36 (85)
                      .|.|.+||..+..
T Consensus         3 ~y~C~~CGyvYd~   15 (52)
T 1e8j_A            3 IYVCTVCGYEYDP   15 (52)
T ss_dssp             CEECSSSCCCCCT
T ss_pred             cEEeCCCCeEEcC
Confidence            5788889877654

>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y

Probab=84.20  E-value=0.1  Score=25.39  Aligned_cols=31  Identities=19%  Similarity=0.485  Sum_probs=23.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..||+.-         +.+...| |.|..|++.|..
T Consensus        35 aky~CpfCgk~~---------vKR~a~GIW~C~kCg~~~AG   66 (103)
T 4a17_Y           35 AKYGCPFCGKVA---------VKRAAVGIWKCKPCKKIIAG   66 (103)
T ss_dssp             SCEECTTTCCEE---------EEEEETTEEEETTTTEEEEC
T ss_pred             cCCCCCCCCCce---------eeecCcceEEcCCCCCEEeC
Confidence            689999998762         1245677 999999877654

>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...

Probab=84.09  E-value=0.091  Score=22.39  Aligned_cols=13  Identities=23%  Similarity=0.782  Sum_probs=9.4

Q ss_pred             CccCCCCccccCC
Q psy3492          24 PFNCALCEYKAAR   36 (85)
Q Consensus        24 ~~~c~~c~~~f~~   36 (85)
                      .|.|.+||..+..
T Consensus         2 ~~~C~~CGyvYd~   14 (52)
T 1yk4_A            2 KLSCKICGYIYDE   14 (52)
T ss_dssp             EEEESSSSCEEET
T ss_pred             cEEeCCCCeEECC
Confidence            4678888877654

>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z

Probab=82.52  E-value=0.2  Score=24.93  Aligned_cols=31  Identities=16%  Similarity=0.377  Sum_probs=21.2

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..||+.-     +    .+...| |.|..|++.|+.
T Consensus        59 akytCPfCGk~~-----v----KR~avGIW~C~~Cgk~fAG   90 (116)
T 3cc2_Z           59 EDHACPNCGEDR-----V----DRQGTGIWQCSYCDYKFTG   90 (116)
T ss_dssp             SCEECSSSCCEE-----E----EEEETTEEEETTTCCEEEC
T ss_pred             cCCcCCCCCCce-----e----EecCceeEECCCCCCEEEC
Confidence            678898888631     1    134456 999999887654

>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}

Probab=81.72  E-value=0.12  Score=24.09  Aligned_cols=14  Identities=29%  Similarity=0.766  Sum_probs=10.7

Q ss_pred             CCccCCCCccccCC
Q psy3492          23 KPFNCALCEYKAAR   36 (85)
Q Consensus        23 ~~~~c~~c~~~f~~   36 (85)
                      ..|.|.+||..+..
T Consensus        26 ~~y~C~vCGyvYD~   39 (81)
T 2kn9_A           26 KLFRCIQCGFEYDE   39 (81)
T ss_dssp             CEEEETTTCCEEET
T ss_pred             ceEEeCCCCEEEcC
Confidence            45889999987764

>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A

Probab=80.49  E-value=0.22  Score=22.55  Aligned_cols=15  Identities=20%  Similarity=0.609  Sum_probs=11.3

Q ss_pred             CCccCCCCccccCCh
Q psy3492          23 KPFNCALCEYKAARP   37 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~   37 (85)
                      ..|.|.+||..+...
T Consensus         6 ~~y~C~vCGyiYd~~   20 (70)
T 1dx8_A            6 GKYECEACGYIYEPE   20 (70)
T ss_dssp             SCEEETTTCCEECTT
T ss_pred             ceEEeCCCCEEEcCC
Confidence            468899999877643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	85
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.76
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.67
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.35
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.24
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.21
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.2
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.19
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.17
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.16
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.15
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.14
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.14
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.13
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.11
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.09
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.02
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.97
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.88
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.87
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.86
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.78
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.77
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.75
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.73
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.69
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.68
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.62
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.62
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.57
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.53
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.43
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.39
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.38
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.34
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.23
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.17
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.11
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.03
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.98
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.95
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.93
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.91
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.83
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.78
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.75
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.72
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.7
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.65
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.64
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.52
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.46
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.39
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.37
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	97.3
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.29
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.24
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.23
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.2
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	97.11
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.1
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.09
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.08
d1y0jb1	36	U-shaped transcription factor, different fingers {	97.07
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.07
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.0
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.95
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.9
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.82
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.72
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.69
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.56
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.47
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.45
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.43
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.15
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.91
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.11
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.5
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.19
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.56
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.31
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.45
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.24
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.75
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	90.81
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	90.03
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.64
d1fu9a_	36	U-shaped transcription factor, different fingers {	88.18
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	88.11
d2dsxa1	52	Rubredoxin {Desulfovibrio gigas [TaxId: 879]}	87.81
d1s24a_	56	Two-iron rubredoxin {Pseudomonas oleovorans [TaxId	87.58
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	87.04
d1brfa_	53	Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2	86.7
d1jj2y_	73	Ribosomal protein L37ae {Archaeon Haloarcula maris	84.48
d1vqoz1	73	Ribosomal protein L37ae {Archaeon Haloarcula maris	84.42
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	84.33
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	83.81
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	83.52
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	83.38

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.4e-19  Score=77.39  Aligned_cols=49  Identities=20%  Similarity=0.383  Sum_probs=43.5

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCCcCccccCCHHHHHHHHhhc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      +||.|. ||+.|.....|..|+ ++|+|   |.|++||+.|...+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~-~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHh-hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            688994 999999999999998 78888   89999999999999999999876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.7e-17  Score=70.19  Aligned_cols=46  Identities=24%  Similarity=0.514  Sum_probs=43.6

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCccCCCCccccCChHHHHHHHHhhC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      | +||++|.....|..|+++|+  +||.|..||++|...+.|..|+ ++|
T Consensus         6 C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~-r~H   53 (53)
T d2csha1           6 C-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIH   53 (53)
T ss_dssp             C-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTT
T ss_pred             C-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHH-hcC
Confidence            7 49999999999999999999  9999999999999999999998 665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.2e-13  Score=55.40  Aligned_cols=33  Identities=15%  Similarity=0.345  Sum_probs=21.3

Q ss_pred             HHHhcC--CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          17 HLNTHI--KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        17 h~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |+++|+  +||.|.+||++|...+.|..|+ ++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~-r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHR-RTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhC-ccCCC
Confidence            445566  6666666666666666666666 56654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=8.5e-13  Score=48.22  Aligned_cols=23  Identities=22%  Similarity=0.365  Sum_probs=11.6

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |+|.+||++|.+.+.|..|+++|
T Consensus         3 y~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCccCC
Confidence            34555555555555555555544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.2e-12  Score=51.70  Aligned_cols=30  Identities=27%  Similarity=0.533  Sum_probs=16.1

Q ss_pred             ccCCcCccccCCHHHHHHHHh-hcc---cccCcC
Q psy3492          51 RICSKCSFLADDQETLNEHLQ-QHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~-~h~---~~~C~~   80 (85)
                      |.|.+||+.|...+.|..|++ +|+   ||+|++
T Consensus         6 y~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             ccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            555555555555555555543 455   555543

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.6e-12  Score=49.70  Aligned_cols=27  Identities=33%  Similarity=0.680  Sum_probs=16.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||+|..||++|...+.|..|+ ++|+|
T Consensus         6 kpy~C~~Cgk~F~~~~~L~~H~-r~Htg   32 (33)
T d1x6ea1           6 KPYGCVECGKAFSRSSILVQHQ-RVHTG   32 (33)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HGGGC
T ss_pred             CCeeCCCCCCEeCchHHhHhhc-cccCC
Confidence            6666666666666666666665 45543

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.4e-12  Score=52.19  Aligned_cols=31  Identities=16%  Similarity=0.294  Sum_probs=28.4

Q ss_pred             HHHhhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          43 HVIKVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        43 h~~~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |+ .+|++   |.|++||++|...+.|..|+++|+
T Consensus         3 H~-~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           3 SE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CC-SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             cC-cccCCCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            55 67887   999999999999999999999997

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=5.3e-12  Score=50.59  Aligned_cols=32  Identities=34%  Similarity=0.786  Sum_probs=25.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC---ccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK---RICS   54 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~---~~C~   54 (85)
                      +||.|..||+.|...+.|..|++++|+|   |.|+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            7888888888888888888887446887   7775

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=2.3e-12  Score=51.31  Aligned_cols=31  Identities=35%  Similarity=0.615  Sum_probs=17.5

Q ss_pred             HHhcC--CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          18 LNTHI--KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        18 ~~~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      .++|+  +||.|..|++.|..++.|..|+ +.|.
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~-r~H~   35 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHM   35 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGT
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHH-hcCc
Confidence            34455  5666666666666666666665 4543

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.6e-12  Score=48.99  Aligned_cols=28  Identities=21%  Similarity=0.390  Sum_probs=25.9

Q ss_pred             hCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          47 VHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        47 ~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +|+|   |.|.+||++|...+.|..|+++|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            3666   999999999999999999999997

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=3e-12  Score=47.73  Aligned_cols=27  Identities=37%  Similarity=0.891  Sum_probs=15.6

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|.+|+++|..++.|..|+ ++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~-r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHI-RTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HHHHC
T ss_pred             cCccCCCCcCEecccccccccC-CCccC
Confidence            4566666666666666666665 45543

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=3.5e-12  Score=46.54  Aligned_cols=26  Identities=27%  Similarity=0.660  Sum_probs=22.9

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      |||+|.+||++|...+.|..|+ ++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hq-riHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQ-RIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHH
T ss_pred             CCccCCCCcCeeccCcccccCc-cCCC
Confidence            6899999999999999999998 6763

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.17  E-value=1.5e-11  Score=46.22  Aligned_cols=27  Identities=33%  Similarity=0.698  Sum_probs=15.1

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|.+|+++|..++.|..|+ ++|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTS
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccC
Confidence            3555555555555555555555 45543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=7.9e-12  Score=49.70  Aligned_cols=29  Identities=17%  Similarity=0.338  Sum_probs=27.2

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +.|+|   |.|++||+.|.+.+.|..|+++|.
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            68888   999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.6e-11  Score=48.45  Aligned_cols=29  Identities=31%  Similarity=0.613  Sum_probs=16.4

Q ss_pred             hcC--CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          20 THI--KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        20 ~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +|+  +||+|.+||++|...+.|..|+ ++|.
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~-r~H~   32 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHF-KRYH   32 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHH-HHTT
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhC-cccC
Confidence            455  5666666666666666666665 4443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.4e-11  Score=48.67  Aligned_cols=29  Identities=21%  Similarity=0.440  Sum_probs=27.0

Q ss_pred             hhCCC---ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          46 KVHNK---RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        46 ~~h~~---~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      ++|+|   |.|.+||++|.+.+.|..|+++|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            36888   999999999999999999999997

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1e-11  Score=48.94  Aligned_cols=30  Identities=27%  Similarity=0.548  Sum_probs=25.6

Q ss_pred             ccCCc--CccccCCHHHHHHHHhhcc---cccCcC
Q psy3492          51 RICSK--CSFLADDQETLNEHLQQHI---FWECSF   80 (85)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h~---~~~C~~   80 (85)
                      |.|+.  ||+.|...+.|..|+++|+   ||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            56754  9999999999999999999   899875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.6e-11  Score=46.14  Aligned_cols=25  Identities=32%  Similarity=0.751  Sum_probs=12.2

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      ||.|.+|++.|..++.|..|+ ++|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~-r~Ht   26 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHI-KTHQ   26 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHH-HGGG
T ss_pred             CEECCcCCCeecchHHhhhhc-CccC
Confidence            444555555555555555554 3443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.6e-11  Score=46.09  Aligned_cols=24  Identities=21%  Similarity=0.459  Sum_probs=23.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|++||+.|.+.+.|..|+++|+
T Consensus         3 y~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           3 FACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             SCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             EECCcCCCeecchHHhhhhcCccC
Confidence            899999999999999999999998

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.13  E-value=2.5e-11  Score=45.60  Aligned_cols=24  Identities=29%  Similarity=0.555  Sum_probs=23.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|++||+.|.+.+.|..|+++|+
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           3 FVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CCCCCCCCCCCCchHcccccCccc
Confidence            789999999999999999999998

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=9.4e-12  Score=46.36  Aligned_cols=24  Identities=21%  Similarity=0.398  Sum_probs=23.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|++||+.|.+++.|..|+++|+
T Consensus         4 y~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           4 FQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHH
T ss_pred             ccCCCCcCEecccccccccCCCcc
Confidence            899999999999999999999996

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=2.5e-11  Score=47.45  Aligned_cols=26  Identities=35%  Similarity=0.700  Sum_probs=14.6

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|.+|++.|..++.|..|+ ++|+
T Consensus         6 kPy~C~~C~k~F~~~~~L~~H~-r~Ht   31 (35)
T d1srka_           6 RPFVCRICLSAFTTKANCARHL-KVHT   31 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHH-GGGT
T ss_pred             ccccCCCCCCcccChHHHHHHc-cccC
Confidence            5555555555555555555555 4554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=5.1e-11  Score=46.55  Aligned_cols=24  Identities=21%  Similarity=0.393  Sum_probs=23.2

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|++|++.|.+.+.|..|+++|+
T Consensus         8 y~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           8 FVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             EECSSSCCEESSHHHHHHHHGGGT
T ss_pred             ccCCCCCCcccChHHHHHHccccC
Confidence            999999999999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=5.7e-11  Score=46.81  Aligned_cols=29  Identities=28%  Similarity=0.767  Sum_probs=19.1

Q ss_pred             hcC--CCccCCCCccccCChHHHHHHHHhhC
Q psy3492          20 THI--KPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        20 ~h~--~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      +|+  +||.|..|++.|..+++|..|+++.|
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            456  77777777777777777777753344

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=8.4e-11  Score=46.25  Aligned_cols=27  Identities=22%  Similarity=0.490  Sum_probs=22.3

Q ss_pred             CCCcccccChHHHHHHHHhcC--CCccCC
Q psy3492           2 PRLQVLISYNWCLKRHLNTHI--KPFNCA   28 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~h~~~h~--~~~~c~   28 (85)
                      +.|+++|...+.|++|+++|+  +||.|+
T Consensus         7 ~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           7 PACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            458888888888888888888  888885

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=3.4e-10  Score=42.65  Aligned_cols=27  Identities=37%  Similarity=0.762  Sum_probs=14.8

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..  |+++|..++.|..|+ ++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHL-RSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHH-HHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhc-CcCcC
Confidence            3555555  555555555555555 45543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=9.3e-10  Score=41.43  Aligned_cols=24  Identities=29%  Similarity=0.506  Sum_probs=22.6

Q ss_pred             ccCCc--CccccCCHHHHHHHHhhcc
Q psy3492          51 RICSK--CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.  ||++|...+.|..|+++|+
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           3 HKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             eeCCCCCCCceECChhHhhhhcCcCc
Confidence            78977  9999999999999999997

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4.8e-10  Score=42.28  Aligned_cols=26  Identities=38%  Similarity=0.818  Sum_probs=13.5

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..  |+++|...+.|..|+ ++|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHV-RIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccc-cccC
Confidence            3555544  555555555555555 3444

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=6.2e-10  Score=43.74  Aligned_cols=26  Identities=23%  Similarity=0.355  Sum_probs=23.8

Q ss_pred             hCCC---ccCCcCccccCCHHHHHHHHhh
Q psy3492          47 VHNK---RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        47 ~h~~---~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      +|+|   |.|+.||+.|.+.+.|..|++.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            6888   9999999999999999999764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.2e-09  Score=41.18  Aligned_cols=24  Identities=21%  Similarity=0.275  Sum_probs=22.1

Q ss_pred             ccCCc--CccccCCHHHHHHHHhhcc
Q psy3492          51 RICSK--CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.  ||++|...+.|..|+++|+
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           3 FQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             ccCCCCCCCceECcHHHcCccccccC
Confidence            67866  9999999999999999997

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=1e-09  Score=40.98  Aligned_cols=26  Identities=27%  Similarity=0.938  Sum_probs=13.4

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..  |++.|...+.|..|+ +.|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~-r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHI-RIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHT-HHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhc-CccC
Confidence            3555544  555555555555554 3444

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=4.1e-09  Score=39.93  Aligned_cols=24  Identities=21%  Similarity=0.455  Sum_probs=16.8

Q ss_pred             ccCC--cCccccCCHHHHHHHHhhcc
Q psy3492          51 RICS--KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~--~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+  .||+.|...+.|..|+++|+
T Consensus         3 f~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           3 FMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCCcCCCCCcCcCChhHhhhhcCccc
Confidence            5563  57777777777777777776

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=5.3e-09  Score=36.46  Aligned_cols=26  Identities=31%  Similarity=0.737  Sum_probs=14.8

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |.+|++|++.|+.+..|..|+ +.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccCC
Confidence            345566666666666666665 45543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=9.8e-10  Score=40.63  Aligned_cols=19  Identities=21%  Similarity=0.410  Sum_probs=10.7

Q ss_pred             CccccCCHHHHHHHHhhcc
Q psy3492          56 CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        56 c~~~f~~~~~l~~h~~~h~   74 (85)
                      ||++|...+.|..|+++|+
T Consensus        10 C~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4          10 CNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSSTTTTHHHHHHHC
T ss_pred             cCCcCCCHHHHHHHHhhcc
Confidence            5555555555555555553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=7.5e-09  Score=39.18  Aligned_cols=27  Identities=30%  Similarity=0.753  Sum_probs=22.7

Q ss_pred             CCccCC--CCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCA--LCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~--~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|+  .|++.|...+.|..|+ ++|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-Ccccc
Confidence            588886  4999999999999998 78876

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=6.9e-09  Score=39.51  Aligned_cols=24  Identities=21%  Similarity=0.326  Sum_probs=16.2

Q ss_pred             ccCCc--CccccCCHHHHHHHHhhcc
Q psy3492          51 RICSK--CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.  ||+.|...+.|.+|+++|+
T Consensus         4 ~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           4 YSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             BCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             eECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            55654  7777777777777777665

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=2.4e-09  Score=39.94  Aligned_cols=24  Identities=21%  Similarity=0.432  Sum_probs=21.9

Q ss_pred             ccCCc--CccccCCHHHHHHHHhhcc
Q psy3492          51 RICSK--CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.  ||++|...+.|..|+++|+
T Consensus         3 ~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           3 YACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             eECCCCCCCcEECchhHhhhhcCccC
Confidence            67865  9999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=2.1e-08  Score=38.14  Aligned_cols=26  Identities=31%  Similarity=0.708  Sum_probs=21.5

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..  |++.|...+.|.+|+ ++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~-r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHh-hhcc
Confidence            5888877  888888888888888 6775

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=4.8e-09  Score=38.71  Aligned_cols=26  Identities=31%  Similarity=0.775  Sum_probs=21.1

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|+.  |++.|...+.|..|+ +.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~-r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHI-LTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHH-HHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHH-hhcc
Confidence            5888877  888888888888888 6664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=4.3e-10  Score=46.74  Aligned_cols=27  Identities=26%  Similarity=0.619  Sum_probs=14.2

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|..  |++.|..++.|..|+ ++|+|
T Consensus        17 kpy~C~~~~C~k~F~~~~~L~~H~-r~Htg   45 (47)
T d1ncsa_          17 KTFECLFPGCTKTFKRRYNIRSHI-QTHLE   45 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHH-HHHTT
T ss_pred             CCeECCcCCCCccccCchHHHhhc-ccccC
Confidence            5555544  555555555555555 45543

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=3.1e-08  Score=34.47  Aligned_cols=24  Identities=21%  Similarity=0.498  Sum_probs=22.1

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .+|+.|++.|.+.+.|..|+|.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            369999999999999999999886

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.53  E-value=3.8e-10  Score=46.87  Aligned_cols=33  Identities=18%  Similarity=0.295  Sum_probs=27.6

Q ss_pred             HHHHHHhhCCC---ccCCc--CccccCCHHHHHHHHhhcc
Q psy3492          40 LATHVIKVHNK---RICSK--CSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        40 l~~h~~~~h~~---~~C~~--c~~~f~~~~~l~~h~~~h~   74 (85)
                      +..|+  .|.|   |.|+.  ||+.|...+.|..|+++|+
T Consensus         7 l~~h~--~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_           7 IDKYV--KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             GGGSC--EEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             hcchh--hccCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            44454  3666   99976  9999999999999999997

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=7.2e-08  Score=34.16  Aligned_cols=23  Identities=22%  Similarity=0.496  Sum_probs=17.0

Q ss_pred             cCCcCccccCCHHHHHHHHhhcc
Q psy3492          52 ICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        52 ~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .|.+||++|..++.|.+|+-+|+
T Consensus         4 vc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTS
T ss_pred             hHHHHhHHHHHHHHHHHHhhccc
Confidence            47777777777777777777665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.43  E-value=8.7e-08  Score=34.34  Aligned_cols=23  Identities=17%  Similarity=0.316  Sum_probs=14.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|..||+.|+.++...+|.++|
T Consensus         4 f~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           4 FACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHHGGG
T ss_pred             cccchhhhhhhcchhhhhhhhhc
Confidence            55666666666666666666655

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.39  E-value=1.9e-07  Score=33.41  Aligned_cols=26  Identities=42%  Similarity=0.825  Sum_probs=23.6

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|++||+.|..+....+|. .+|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~-kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHT-KIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHH-GGGC
T ss_pred             CCcccchhhhhhhcchhhhhhh-hhcc
Confidence            6999999999999999999998 6774

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=2.6e-07  Score=33.00  Aligned_cols=24  Identities=29%  Similarity=0.699  Sum_probs=21.4

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.||..-.-++.|.+|+++|+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             ccccccCcccCCHHHHHHHHHHhc
Confidence            678999999999999999999887

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.1e-07  Score=35.29  Aligned_cols=25  Identities=24%  Similarity=0.340  Sum_probs=21.7

Q ss_pred             CCCCcccccChHHHHHHHHhcC--CCc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI--KPF   25 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~--~~~   25 (85)
                      |+.|||+|.....|.+|...|+  +||
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            6789999999999999988888  776

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=4.1e-07  Score=32.16  Aligned_cols=25  Identities=28%  Similarity=0.442  Sum_probs=17.4

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      ..|..||++|...+.|++|+ ..|+|
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccC
Confidence            45677777777777777776 56654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.23  E-value=6.9e-07  Score=30.69  Aligned_cols=23  Identities=22%  Similarity=0.404  Sum_probs=15.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |+|..|.++|...+.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666777777777777777665

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=1.4e-06  Score=30.91  Aligned_cols=27  Identities=30%  Similarity=0.901  Sum_probs=15.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||+|..|...-...+.|..|+ +.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhl-r~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHL-RSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-TTCCS
T ss_pred             CcceeeecccccCCchheEEee-ecccC
Confidence            4566666666666666666665 45543

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=1.1e-06  Score=31.87  Aligned_cols=27  Identities=33%  Similarity=0.898  Sum_probs=20.1

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +||.|.+|...|..+..+.-|. +.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhv-rshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHV-RSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHH-HHHSC
T ss_pred             CCcccchHHHHhhccccceEee-ecccC
Confidence            5777888888888877777777 56654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=3.7e-06  Score=30.38  Aligned_cols=22  Identities=41%  Similarity=0.899  Sum_probs=14.5

Q ss_pred             CCccCCC--CccccCChHHHHHHH
Q psy3492          23 KPFNCAL--CEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~   44 (85)
                      +||.|.+  |++.+..+++|..|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~   24 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHV   24 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHH
Confidence            4666655  666666666666666

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.2e-06  Score=29.74  Aligned_cols=23  Identities=39%  Similarity=0.826  Sum_probs=12.1

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |+|..|..+-...++|++|+|+|
T Consensus         4 ~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           4 YKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHS
T ss_pred             cccccccchhcchhhHhhhhhcc
Confidence            34555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=6.3e-06  Score=28.94  Aligned_cols=26  Identities=38%  Similarity=0.990  Sum_probs=23.5

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +|++|..|+.+-...++|..|+ ++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~-rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHL-RIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-HHSC
T ss_pred             CCcccccccchhcchhhHhhhh-hccc
Confidence            6899999999999999999998 6875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.93  E-value=5.4e-06  Score=30.22  Aligned_cols=26  Identities=35%  Similarity=0.782  Sum_probs=15.0

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      ||.|.+|++.|....-|.+|+...|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            45666666666666666666544443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.91  E-value=5.9e-06  Score=28.27  Aligned_cols=24  Identities=33%  Similarity=0.761  Sum_probs=20.4

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCC
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      |+|..|++.|..++.|.+|+ +.|.
T Consensus         1 ykcglcersfveksalsrhq-rvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQ-RVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGTC
T ss_pred             CcccchHHHHHHHHHHHHHH-Hhhc
Confidence            57889999999999999998 6763

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=7.6e-06  Score=28.96  Aligned_cols=24  Identities=25%  Similarity=0.600  Sum_probs=22.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |+|..|.....+++.|..|++.|+
T Consensus         4 fkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           4 FKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCC
T ss_pred             ceeeecccccCCchheEEeeeccc
Confidence            789999999999999999999987

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=8e-06  Score=30.19  Aligned_cols=23  Identities=30%  Similarity=0.475  Sum_probs=12.2

Q ss_pred             cCCcCccccCCHHHHHHHHhhcc
Q psy3492          52 ICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        52 ~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .|+.||+.|...-.|++|.-.|+
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs   29 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHS   29 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccC
Confidence            35555555555555555555444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.75  E-value=9.7e-06  Score=31.27  Aligned_cols=24  Identities=25%  Similarity=0.401  Sum_probs=19.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|..|++.|.+...|--|++.|.
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTC
T ss_pred             cCCCCCCCccCCcccccchHhhhc
Confidence            678888888888888888888775

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.5e-05  Score=31.03  Aligned_cols=22  Identities=27%  Similarity=0.762  Sum_probs=19.3

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +||+|.+|++.|-+..++.+|.
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhh
Confidence            7899999999999998888886

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=2.3e-05  Score=27.15  Aligned_cols=22  Identities=23%  Similarity=0.271  Sum_probs=16.5

Q ss_pred             CCCCcccccChHHHHHHHHhcC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI   22 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~   22 (85)
                      ||.|.+.|.++..|+.|-+.|+
T Consensus         3 cp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHS
T ss_pred             CcchHHHHHHhHhhhhcccccc
Confidence            6777778877777777777665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=3.7e-05  Score=27.29  Aligned_cols=25  Identities=28%  Similarity=0.760  Sum_probs=21.0

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |.|..||.....++.|+.|+ +.|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHI-RsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHI-RTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH-HHTSS
T ss_pred             ccccccCcccCCHHHHHHHH-HHhcC
Confidence            67888888888899999998 68875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=2.7e-05  Score=27.74  Aligned_cols=26  Identities=35%  Similarity=0.979  Sum_probs=18.3

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h   48 (85)
                      +||+|..|...-.++++|..|+...|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            47777777777777777777774433

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.65  E-value=1.9e-05  Score=27.99  Aligned_cols=21  Identities=33%  Similarity=0.871  Sum_probs=11.3

Q ss_pred             CccCCC--CccccCChHHHHHHH
Q psy3492          24 PFNCAL--CEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~--c~~~f~~~~~l~~h~   44 (85)
                      ||+|..  |++.|..++.|++|.
T Consensus         3 py~c~hegcdk~fs~ps~lkrhe   25 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHE   25 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhh
Confidence            455543  555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.7e-05  Score=28.12  Aligned_cols=23  Identities=22%  Similarity=0.309  Sum_probs=20.3

Q ss_pred             ccCC--cCccccCCHHHHHHHHhhc
Q psy3492          51 RICS--KCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~--~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|+  .|++.|..++.|.+|-++|
T Consensus         4 y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           4 YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             ccCCccCccccccCHHHHhhhhhcc
Confidence            6775  4999999999999999887

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=4.3e-05  Score=27.53  Aligned_cols=23  Identities=22%  Similarity=0.509  Sum_probs=19.6

Q ss_pred             ccCCc--CccccCCHHHHHHHHhhc
Q psy3492          51 RICSK--CSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~--c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|..  |++.+..+++|++|++.+
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             eecccCCCCcccCCHHHHHHHHHhh
Confidence            56654  999999999999999964

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.46  E-value=5.5e-05  Score=29.10  Aligned_cols=22  Identities=18%  Similarity=0.093  Sum_probs=19.5

Q ss_pred             CCCCcccccChHHHHHHHHhcC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI   22 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~   22 (85)
                      |..|++.|.+...|-.||+.|.
T Consensus         8 C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           8 CSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             CTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCccCCcccccchHhhhc
Confidence            7889999999999999998886

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.00014  Score=25.86  Aligned_cols=23  Identities=35%  Similarity=0.876  Sum_probs=15.8

Q ss_pred             CCccCCCCccccCChHHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHVI   45 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~   45 (85)
                      +||+|..|.......++|+.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhh
Confidence            46777777776667777777763

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=6.1e-05  Score=27.13  Aligned_cols=24  Identities=17%  Similarity=0.458  Sum_probs=22.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|+.|+..|...+-+..|.+.|.
T Consensus         4 ~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           4 YSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             SEETTTTEECSCHHHHHHHHHHHS
T ss_pred             cccchHHHHhhccccceEeeeccc
Confidence            889999999999999999999886

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00012  Score=25.59  Aligned_cols=22  Identities=23%  Similarity=0.523  Sum_probs=17.3

Q ss_pred             ccCCcCccccCCHHHHHHHHhh
Q psy3492          51 RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |.|+.|+......+.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5788888888888888888773

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.29  E-value=8.5e-05  Score=26.97  Aligned_cols=21  Identities=24%  Similarity=0.363  Sum_probs=19.6

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |.|..|++.|...+-|.+|++
T Consensus         2 f~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           2 YPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             EECTTTCCEESSHHHHHHHHT
T ss_pred             cccccccchhhHHHHHHHHHH
Confidence            679999999999999999987

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=0.0002  Score=24.93  Aligned_cols=21  Identities=38%  Similarity=0.656  Sum_probs=14.4

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||+|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            566777777777777766665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00049  Score=27.60  Aligned_cols=24  Identities=29%  Similarity=0.439  Sum_probs=12.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|..|||.|.....|++|-..|-
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeccccccccCCHHHHhHhHHhcC
Confidence            455555555555555555554443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.00018  Score=24.84  Aligned_cols=24  Identities=25%  Similarity=0.409  Sum_probs=13.8

Q ss_pred             cCCCCccccCChHHHHHHHHhhCCC
Q psy3492          26 NCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        26 ~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      +|..|.+.|.++..|+.|- +.|+|
T Consensus         2 qcp~c~k~f~skyylkvhn-r~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHN-RKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHH-HHHSS
T ss_pred             cCcchHHHHHHhHhhhhcc-ccccC
Confidence            4556666666666666665 44443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0002  Score=25.09  Aligned_cols=21  Identities=19%  Similarity=0.089  Sum_probs=15.9

Q ss_pred             CCCCcccccChHHHHHHHHhc
Q psy3492           1 MPRLQVLISYNWCLKRHLNTH   21 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h   21 (85)
                      |++|..+-+++..|+.|.++|
T Consensus         5 c~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           5 CSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             CSSSSCEESSHHHHHHHHGGG
T ss_pred             CcccccccCcHHHHHHhhccc
Confidence            677777777777777777776

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00024  Score=26.33  Aligned_cols=24  Identities=25%  Similarity=0.468  Sum_probs=18.6

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|.+||+.|.....+.+|....+
T Consensus         5 fvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeecccccchhcchHHHHHhhhcC
Confidence            678888888888888888866443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00021  Score=27.70  Aligned_cols=22  Identities=14%  Similarity=0.300  Sum_probs=20.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhh
Q psy3492          51 RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |.|..||+.|.+.+++.+|...
T Consensus         6 YeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           6 YECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             EECSSSCCEESCHHHHHHHHHH
T ss_pred             eeccchhhhhhhHHHHHHhhhh
Confidence            8999999999999999999653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00026  Score=25.02  Aligned_cols=21  Identities=24%  Similarity=0.823  Sum_probs=12.3

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||.|..|...|..+.+|..|+
T Consensus         1 py~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhh
Confidence            455555666666666665555

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.08  E-value=0.00039  Score=23.59  Aligned_cols=21  Identities=24%  Similarity=0.749  Sum_probs=15.5

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      ||+|..|...|-++..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            677777777777777777776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.07  E-value=0.00024  Score=26.10  Aligned_cols=20  Identities=25%  Similarity=0.506  Sum_probs=18.6

Q ss_pred             ccCCcCccccCCHHHHHHHH
Q psy3492          51 RICSKCSFLADDQETLNEHL   70 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~   70 (85)
                      |.|..||-.|.+.+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            89999999999999999886

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.00033  Score=24.73  Aligned_cols=22  Identities=18%  Similarity=0.135  Sum_probs=16.0

Q ss_pred             CCCCcccccChHHHHHHHHhcC
Q psy3492           1 MPRLQVLISYNWCLKRHLNTHI   22 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~~h~   22 (85)
                      |..|...|...-.|..||..|+
T Consensus         7 cs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           7 CSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CSSSCCEESSHHHHHHHHHHHS
T ss_pred             eHHHHHHHHHHHhheeeeeccc
Confidence            5677777777777777777664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00029  Score=24.92  Aligned_cols=23  Identities=22%  Similarity=0.586  Sum_probs=20.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|..|..+|.....|..|++.-
T Consensus         2 y~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHSS
T ss_pred             cccceeeeeEeeccchhHhhhhh
Confidence            67999999999999999999853

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00047  Score=24.08  Aligned_cols=21  Identities=33%  Similarity=0.724  Sum_probs=10.4

Q ss_pred             CCcCccccCCHHHHHHHHhhc
Q psy3492          53 CSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        53 C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |++|..+-.+...|+.|.|+|
T Consensus         5 c~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           5 CSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             CSSSSCEESSHHHHHHHHGGG
T ss_pred             CcccccccCcHHHHHHhhccc
Confidence            444544445555555554444

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00021  Score=25.88  Aligned_cols=15  Identities=20%  Similarity=0.284  Sum_probs=7.1

Q ss_pred             CccccCCHHHHHHHH
Q psy3492          56 CSFLADDQETLNEHL   70 (85)
Q Consensus        56 c~~~f~~~~~l~~h~   70 (85)
                      |.|+|.+.+.-.+|+
T Consensus        10 C~KafsNsSDraKHq   24 (31)
T d2glia4          10 CSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCCEESSSSTTHHHH
T ss_pred             hhhhhcchhhhhhhc
Confidence            444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.82  E-value=0.00025  Score=25.10  Aligned_cols=26  Identities=35%  Similarity=0.612  Sum_probs=15.3

Q ss_pred             CCccCCC--CccccCChHHHHHHHHhhCC
Q psy3492          23 KPFNCAL--CEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~~~~h~   49 (85)
                      +||.|..  |++.|.....|.+|. ..|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs-~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHS-LTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHH-HHHH
T ss_pred             CCcCcccccccccchhhhhhhhhh-cccc
Confidence            4566644  666666666666665 4443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.72  E-value=0.00073  Score=23.80  Aligned_cols=25  Identities=28%  Similarity=0.590  Sum_probs=14.4

Q ss_pred             ccCCCCccccCChHHHHHHHHhhCCC
Q psy3492          25 FNCALCEYKAARPERLATHVIKVHNK   50 (85)
Q Consensus        25 ~~c~~c~~~f~~~~~l~~h~~~~h~~   50 (85)
                      |.|.+|...|...-.|..|+ ..|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hm-vshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHM-VSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHH-HHHSS
T ss_pred             EEeHHHHHHHHHHHhheeee-ecccC
Confidence            55666666666666666665 45543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00065  Score=27.22  Aligned_cols=25  Identities=28%  Similarity=0.498  Sum_probs=21.9

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCC
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHN   49 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~   49 (85)
                      .+.|..|++.|.....|++|. ..|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HE-AQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHE-AQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHH-HHHT
T ss_pred             eeeccccccccCCHHHHhHhH-HhcC
Confidence            478999999999999999998 6764

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.56  E-value=0.00068  Score=23.43  Aligned_cols=21  Identities=19%  Similarity=0.311  Sum_probs=14.7

Q ss_pred             CcCccccCCHHHHHHHHhhcc
Q psy3492          54 SKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        54 ~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      +.||++|.....|..|+-+|+
T Consensus         7 e~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           7 ENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TTCCCEESSHHHHHHHHHHHH
T ss_pred             cCchHHHhhccceEEEeeccc
Confidence            357777777777777776654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0017  Score=22.99  Aligned_cols=23  Identities=26%  Similarity=0.644  Sum_probs=20.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhhc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQH   73 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h   73 (85)
                      |.|..|....+.++.|..|.++-
T Consensus         3 y~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             ccccccccccccchhhhhhhhcc
Confidence            78999999999999999999863

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0014  Score=22.91  Aligned_cols=20  Identities=25%  Similarity=0.534  Sum_probs=15.9

Q ss_pred             cCccccCCHHHHHHHHhhcc
Q psy3492          55 KCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        55 ~c~~~f~~~~~l~~h~~~h~   74 (85)
                      .|++.|...+.+++|+.+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            47888888888888887763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0014  Score=23.18  Aligned_cols=22  Identities=27%  Similarity=0.638  Sum_probs=20.0

Q ss_pred             ccCCcCccccCCHHHHHHHHhh
Q psy3492          51 RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |+|..|.....++++|..|++.
T Consensus         3 FkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           3 FKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             cccceecccccCcchHHHHHHH
Confidence            7899999999999999999873

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.36  E-value=0.0021  Score=21.76  Aligned_cols=19  Identities=11%  Similarity=0.008  Sum_probs=15.4

Q ss_pred             CCCCcccccChHHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLN   19 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~   19 (85)
                      ||.|.+.|..+.++..|..
T Consensus         4 cp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           4 CPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             CTTTCCEESCHHHHHHHHH
T ss_pred             CchhhHHhccccCceEEEE
Confidence            7888888888888887766

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0013  Score=24.44  Aligned_cols=21  Identities=19%  Similarity=0.221  Sum_probs=14.3

Q ss_pred             CCCcccccChHHHHHHHHhcC
Q psy3492           2 PRLQVLISYNWCLKRHLNTHI   22 (85)
Q Consensus         2 ~~c~~~f~~~~~l~~h~~~h~   22 (85)
                      +.-++.|.....|..|+++|+
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HT   31 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHT   31 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHH
T ss_pred             CCCCCcchhHHHHHHHHhhcC
Confidence            334556777777777777775

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0036  Score=23.79  Aligned_cols=22  Identities=36%  Similarity=0.750  Sum_probs=12.0

Q ss_pred             CCccCCC--CccccCChHHHHHHH
Q psy3492          23 KPFNCAL--CEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~--c~~~f~~~~~l~~h~   44 (85)
                      +||.|..  |+..|.....|..|.
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk   28 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHK   28 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHH
T ss_pred             CceecCCCCccccccchHHHHHhh
Confidence            4555533  555555555555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.017  Score=20.25  Aligned_cols=21  Identities=14%  Similarity=0.305  Sum_probs=17.1

Q ss_pred             ccCCcCccccCCHHHHHHHHh
Q psy3492          51 RICSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~   71 (85)
                      |.|..||+.......++.|.-
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            678889988888888887764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.0054  Score=26.16  Aligned_cols=35  Identities=17%  Similarity=0.314  Sum_probs=21.4

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccc
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFL   59 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~   59 (85)
                      ..|.|..|++.|.....++. + ..-.+ |.|..|+..
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L-~-d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL-F-DPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH-E-ETTTTEEBCSSSCCB
T ss_pred             CceECCCCCCCcchhhHHHh-c-CcCCCeEEecCCCCE
Confidence            45778888887776655432 1 23334 778777643

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.19  E-value=0.0095  Score=25.77  Aligned_cols=22  Identities=23%  Similarity=0.458  Sum_probs=17.8

Q ss_pred             ccCCcCccccCCHHHHHHHHhh
Q psy3492          51 RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |-|..|++.|.+...|..|.++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            7788888888888888888664

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.037  Score=19.25  Aligned_cols=18  Identities=22%  Similarity=0.484  Sum_probs=14.2

Q ss_pred             CcCccccCCHHHHHHHHh
Q psy3492          54 SKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        54 ~~c~~~f~~~~~l~~h~~   71 (85)
                      +.||+.|.+..-|+-|.+
T Consensus         6 ~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTTCCEESSHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHH
Confidence            468888888888877765

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.31  E-value=0.06  Score=21.27  Aligned_cols=19  Identities=32%  Similarity=0.438  Sum_probs=12.7

Q ss_pred             CCCCcccccChHHHHHHHH
Q psy3492           1 MPRLQVLISYNWCLKRHLN   19 (85)
Q Consensus         1 c~~c~~~f~~~~~l~~h~~   19 (85)
                      ||.|+-...+..+|.+|..
T Consensus        27 cpic~avirqsrnlrrhle   45 (54)
T d1yuja_          27 CPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CTTTCCEESSHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHH
Confidence            5666666666667766655

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.45  E-value=0.045  Score=20.07  Aligned_cols=22  Identities=18%  Similarity=0.306  Sum_probs=18.7

Q ss_pred             ccCCcCccccCCHHHHHHHHhh
Q psy3492          51 RICSKCSFLADDQETLNEHLQQ   72 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~   72 (85)
                      |.|..|.+.+...+.+-+|--+
T Consensus         9 yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           9 YRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH
T ss_pred             EEeehhhHHHHHHHHHHHHHHh
Confidence            8899999999999998888654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.24  E-value=0.093  Score=18.24  Aligned_cols=25  Identities=20%  Similarity=0.570  Sum_probs=14.8

Q ss_pred             CccCC--CCccccCChHHHHHHHHhhC
Q psy3492          24 PFNCA--LCEYKAARPERLATHVIKVH   48 (85)
Q Consensus        24 ~~~c~--~c~~~f~~~~~l~~h~~~~h   48 (85)
                      .|.|+  .|+-.|..+.+++.|..+.|
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            34554  36667777777776654333

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.75  E-value=0.06  Score=22.85  Aligned_cols=24  Identities=25%  Similarity=0.451  Sum_probs=21.1

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |.|..|...|.....|..|+-.|.
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhcc
Confidence            889999999999999999988776

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=90.81  E-value=0.018  Score=23.72  Aligned_cols=33  Identities=18%  Similarity=0.560  Sum_probs=19.4

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC---------ccCCcCcc
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK---------RICSKCSF   58 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~---------~~C~~c~~   58 (85)
                      .|+|.+||..+.....-..+  .+-.|         |.|+.||.
T Consensus         3 ky~C~~CgyiYd~~~Gd~~~--gi~pGT~F~~LP~dw~CP~C~a   44 (53)
T d1iroa_           3 KYTCTVCGYIYNPEDGDPDN--GVNPGTDFKDIPDDWVCPLCGV   44 (53)
T ss_dssp             CEEETTTCCEECTTTCBGGG--TBCTTCCGGGSCTTCBCTTTCC
T ss_pred             CeEcCCCCcEECcccCCccc--CCCCCCCHHHCCCCCCCcCCCC
Confidence            57889998877654321111  12222         88999974

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=90.03  E-value=0.09  Score=26.80  Aligned_cols=23  Identities=35%  Similarity=0.566  Sum_probs=18.5

Q ss_pred             ccCCcCccccCCHHHHHHHHhhcc
Q psy3492          51 RICSKCSFLADDQETLNEHLQQHI   74 (85)
Q Consensus        51 ~~C~~c~~~f~~~~~l~~h~~~h~   74 (85)
                      |+|..||+ +....+|..|++.|-
T Consensus       147 YKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         147 YKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             EECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             eehhhcCc-eecHHHHHHHHHHcC
Confidence            78999987 556667889999876

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.64  E-value=0.14  Score=18.06  Aligned_cols=15  Identities=20%  Similarity=0.401  Sum_probs=9.0

Q ss_pred             CccccCChHHHHHHH
Q psy3492          30 CEYKAARPERLATHV   44 (85)
Q Consensus        30 c~~~f~~~~~l~~h~   44 (85)
                      |+..|...-.|..|+
T Consensus        11 C~A~ynk~wkL~AHL   25 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHL   25 (31)
T ss_dssp             GCCEESSHHHHHHHH
T ss_pred             cchhhccchhhhHHh
Confidence            555666666666665

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.18  E-value=0.22  Score=18.39  Aligned_cols=19  Identities=32%  Similarity=0.485  Sum_probs=15.3

Q ss_pred             CCcCccccCCHHHHHHHHh
Q psy3492          53 CSKCSFLADDQETLNEHLQ   71 (85)
Q Consensus        53 C~~c~~~f~~~~~l~~h~~   71 (85)
                      |..|+-.|.+.+.+..|.+
T Consensus        11 C~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          11 CSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             ETTTTEECSSHHHHHHHHH
T ss_pred             HhhCCceehhHHHHHHHHH
Confidence            6778888888888888864

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=88.11  E-value=0.035  Score=22.00  Aligned_cols=35  Identities=17%  Similarity=0.490  Sum_probs=18.0

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCCccCCcCcc
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNKRICSKCSF   58 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~~~C~~c~~   58 (85)
                      .|.|.+||..+.....-..-.......|.|+.||.
T Consensus         3 ~y~C~~CgyiYd~~~Gdgt~Fe~LP~dw~CP~C~a   37 (45)
T d6rxna_           3 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGV   37 (45)
T ss_dssp             CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCC
T ss_pred             CeEeCCCCeEECcccCCCCCHHHCCCCCCCcCCCC
Confidence            57888888776543210000000111188999874

>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio gigas [TaxId: 879]

Probab=87.81  E-value=0.04  Score=22.51  Aligned_cols=33  Identities=15%  Similarity=0.457  Sum_probs=18.9

Q ss_pred             CccCCCCccccCChHHHHHHHHhhCCC---------ccCCcCcc
Q psy3492          24 PFNCALCEYKAARPERLATHVIKVHNK---------RICSKCSF   58 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~~~~h~~---------~~C~~c~~   58 (85)
                      .|+|..||..+.....-..+  .+-.|         |.|+.||.
T Consensus         3 ~y~C~~CgyiYdp~~Gd~~~--gi~pGT~F~~LP~~w~CP~C~a   44 (52)
T d2dsxa1           3 IYVCTVCGYEYDPAKGDPDS--GIKPGTKFEDLPDDWACPVCGA   44 (52)
T ss_dssp             CEEETTTCCEECTTTCBGGG--TBCTTCCGGGSCTTCBCTTTCC
T ss_pred             eEEeCCCCeEECcccCCccc--CCCCCCCHHHCCCCCCCcCCCC
Confidence            47888888776554221111  12211         89999974

>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Two-iron rubredoxin
species: Pseudomonas oleovorans [TaxId: 301]

Probab=87.58  E-value=0.016  Score=24.16  Aligned_cols=15  Identities=13%  Similarity=0.270  Sum_probs=10.5

Q ss_pred             CCccCCCCccccCCh
Q psy3492          23 KPFNCALCEYKAARP   37 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~   37 (85)
                      +.|.|.+||..+...
T Consensus         3 kky~C~~CgyiYdp~   17 (56)
T d1s24a_           3 LKWICITCGHIYDEA   17 (56)
T ss_dssp             CEEEETTTTEEEETT
T ss_pred             ccEECCCCCcEECcc
Confidence            457888898776543

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=87.04  E-value=0.058  Score=20.40  Aligned_cols=13  Identities=8%  Similarity=-0.394  Sum_probs=6.4

Q ss_pred             CCccCCCCccccC
Q psy3492          23 KPFNCALCEYKAA   35 (85)
Q Consensus        23 ~~~~c~~c~~~f~   35 (85)
                      ++-.|+.||..+.
T Consensus        21 ~~g~CD~cg~~L~   33 (37)
T d2ak3a2          21 TMGIDDLTGEPLV   33 (37)
T ss_dssp             STTBCTTTCCBCB
T ss_pred             ccCCccCCCCcCE
Confidence            3445555554433

>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.70  E-value=0.031  Score=22.96  Aligned_cols=13  Identities=23%  Similarity=0.741  Sum_probs=9.1

Q ss_pred             ccCCCCccccCCh
Q psy3492          25 FNCALCEYKAARP   37 (85)
Q Consensus        25 ~~c~~c~~~f~~~   37 (85)
                      |+|.+||..+...
T Consensus         3 y~C~~CgyiYd~~   15 (53)
T d1brfa_           3 WVCKICGYIYDED   15 (53)
T ss_dssp             EEETTTCCEEETT
T ss_pred             eECCCCCcEECcc
Confidence            6788888766543

>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L37ae
domain: Ribosomal protein L37ae
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=84.48  E-value=0.091  Score=22.92  Aligned_cols=31  Identities=23%  Similarity=0.704  Sum_probs=22.8

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..|++.-     +    .+.-.| |.|..|++.|..
T Consensus        26 ~ky~Cp~Cgk~~-----v----kR~a~GIW~C~kC~~~~AG   57 (73)
T d1jj2y_          26 KKHKCPVCGFKK-----L----KRAGTGIWMCGHCGYKIAG   57 (73)
T ss_dssp             SCBCCSSSCCSC-----E----EEEETTEEEETTTCCEEEC
T ss_pred             CCccCCCCCCCc-----e----EEEEEEEEECCCCCCEEeC
Confidence            678999998641     1    256677 999999988754

>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L37ae
domain: Ribosomal protein L37ae
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=84.42  E-value=0.092  Score=22.90  Aligned_cols=31  Identities=19%  Similarity=0.433  Sum_probs=23.0

Q ss_pred             CCccCCCCccccCChHHHHHHHHhhCCC-ccCCcCccccCC
Q psy3492          23 KPFNCALCEYKAARPERLATHVIKVHNK-RICSKCSFLADD   62 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~~~~h~~-~~C~~c~~~f~~   62 (85)
                      ..|.|..|++.     .+    .+.-.| |.|..|++.|..
T Consensus        26 ~ky~Cp~Cgk~-----~v----kR~a~GIW~C~kC~~~~AG   57 (73)
T d1vqoz1          26 EDHACPNCGED-----RV----DRQGTGIWQCSYCDYKFTG   57 (73)
T ss_dssp             SCBCCSSSSCS-----CE----EEEETTEEEETTTCCEEEC
T ss_pred             CCccCCCCCCc-----ee----EEEEEEEEECCCCCCEEeC
Confidence            67899999864     11    256677 999999988764

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.33  E-value=0.15  Score=19.29  Aligned_cols=13  Identities=0%  Similarity=-0.107  Sum_probs=6.4

Q ss_pred             CCccCCCCccccC
Q psy3492          23 KPFNCALCEYKAA   35 (85)
Q Consensus        23 ~~~~c~~c~~~f~   35 (85)
                      .+-.|+.||..+.
T Consensus        21 ~~g~CD~cg~~L~   33 (38)
T d1akya2          21 EDMKDDVTGEALV   33 (38)
T ss_dssp             STTBCTTTCCBCB
T ss_pred             cCCccCCCCCEee
Confidence            3345555555443

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.52  E-value=0.22  Score=19.70  Aligned_cols=21  Identities=24%  Similarity=0.494  Sum_probs=16.7

Q ss_pred             CccCCCCccccCChHHHHHHH
Q psy3492          24 PFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        24 ~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +-+|..|+..+..+.+++.|+
T Consensus         6 ~~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           6 KPECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             CSCCTTTTCCCCSSSCHHHHH
T ss_pred             cccCcccceeeeeecchHhhh
Confidence            367888888888888888776

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.38  E-value=0.63  Score=16.91  Aligned_cols=22  Identities=23%  Similarity=0.421  Sum_probs=17.9

Q ss_pred             CCccCCCCccccCChHHHHHHH
Q psy3492          23 KPFNCALCEYKAARPERLATHV   44 (85)
Q Consensus        23 ~~~~c~~c~~~f~~~~~l~~h~   44 (85)
                      +-|.|+.|-+-..+...+.+|+
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~   27 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHM   27 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHH
Confidence            5677888888888888888887