Psyllid ID: psy3626
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 189 | 2.2.26 [Sep-21-2011] | |||||||
| P30043 | 206 | Flavin reductase (NADPH) | yes | N/A | 0.772 | 0.708 | 0.449 | 3e-38 | |
| P52556 | 206 | Flavin reductase (NADPH) | yes | N/A | 0.772 | 0.708 | 0.449 | 7e-38 | |
| Q923D2 | 206 | Flavin reductase (NADPH) | yes | N/A | 0.772 | 0.708 | 0.433 | 2e-36 |
| >sp|P30043|BLVRB_HUMAN Flavin reductase (NADPH) OS=Homo sapiens GN=BLVRB PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 105/189 (55%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++ G
Sbjct: 3 VKKIAIFGATGQTGLTTLAQAVQAGY---------------------------------- 28
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
EV L+RD RLPSE ++ GDVL+ ADV K + G+D V+V LGTRN
Sbjct: 29 ---------EVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 79
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++P+KVPP V DDH RM+ VL
Sbjct: 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL 139
Query: 181 KDSGLNYIA 189
++SGL Y+A
Sbjct: 140 RESGLKYVA 148
|
Broad specificity oxidoreductase that catalyzes the NADPH-dependent reduction of a variety of flavins, such as riboflavin, FAD or FMN, biliverdins, methemoglobin and PQQ (pyrroloquinoline quinone). Contributes to heme catabolism and metabolizes linear tetrapyrroles. Can also reduce the complexed Fe(3+) iron to Fe(2+) in the presence of FMN and NADPH. In the liver, converts biliverdin to bilirubin. Homo sapiens (taxid: 9606) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|P52556|BLVRB_BOVIN Flavin reductase (NADPH) OS=Bos taurus GN=BLVRB PE=1 SV=2 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 105/189 (55%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIA+FGATG TGL +L A++ G
Sbjct: 3 VKKIALFGATGNTGLTTLAQAVQAGY---------------------------------- 28
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
EV L+RDP RLPSE ++ GDV + ADV K + G+D V+V LGTRN
Sbjct: 29 ---------EVTVLVRDPSRLPSEGPQPAHVVVGDVRQPADVDKTVAGQDAVIVLLGTRN 79
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++PSKVPP +V DDH RM+ VL
Sbjct: 80 DLSPTTVMSEGAQNIVAAMKAHGVDKVVACTSAFLLWDPSKVPPRLQDVTDDHIRMHKVL 139
Query: 181 KDSGLNYIA 189
+ SGL Y+A
Sbjct: 140 QQSGLKYVA 148
|
Broad specificity oxidoreductase that catalyzes the NADPH-dependent reduction of a variety of flavins, such as riboflavin, FAD or FMN, biliverdins, methemoglobin and PQQ (pyrroloquinoline quinone). Contributes to heme catabolism and metabolizes linear tetrapyrroles. Can also reduce the complexed Fe(3+) iron to Fe(2+) in the presence of FMN and NADPH. In the liver, converts biliverdin to bilirubin. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q923D2|BLVRB_MOUSE Flavin reductase (NADPH) OS=Mus musculus GN=Blvrb PE=2 SV=3 | Back alignment and function description |
|---|
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 105/189 (55%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++ G
Sbjct: 3 VKKIAIFGATGRTGLTTLAQAVQAGY---------------------------------- 28
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
EV L+RD RLPSE ++ GDV + ADV K + G++ V+V LGT N
Sbjct: 29 ---------EVTVLVRDSSRLPSEGPQPAHVVVGDVRQAADVDKTVAGQEAVIVLLGTGN 79
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIVTAMK + V V C SAFL ++P+KVPP +V DDH RM+ +L
Sbjct: 80 DLSPTTVMSEGTRNIVTAMKAHGVDKVVACTSAFLLWDPTKVPPRLQDVTDDHIRMHKIL 139
Query: 181 KDSGLNYIA 189
++SGL Y+A
Sbjct: 140 QESGLKYVA 148
|
Broad specificity oxidoreductase that catalyzes the NADPH-dependent reduction of a variety of flavins, such as riboflavin, FAD or FMN, biliverdins, methemoglobin and PQQ (pyrroloquinoline quinone). Contributes to heme catabolism and metabolizes linear tetrapyrroles. Can also reduce the complexed Fe(3+) iron to Fe(2+) in the presence of FMN and NADPH. In the liver, converts biliverdin to bilirubin. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 2 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 189 | ||||||
| 240848791 | 205 | flavin reductase [Acyrthosiphon pisum] g | 0.772 | 0.712 | 0.494 | 6e-44 | |
| 91087179 | 201 | PREDICTED: similar to CG9471 CG9471-PB [ | 0.772 | 0.726 | 0.507 | 2e-39 | |
| 351715418 | 214 | Flavin reductase, partial [Heterocephalu | 0.820 | 0.724 | 0.455 | 5e-37 | |
| 119577376 | 211 | biliverdin reductase B (flavin reductase | 0.798 | 0.715 | 0.465 | 5e-37 | |
| 350417519 | 201 | PREDICTED: flavin reductase-like [Bombus | 0.772 | 0.726 | 0.439 | 7e-37 | |
| 242021461 | 210 | Flavin reductase, putative [Pediculus hu | 0.772 | 0.695 | 0.507 | 8e-37 | |
| 403305326 | 206 | PREDICTED: flavin reductase (NADPH) [Sai | 0.772 | 0.708 | 0.455 | 1e-36 | |
| 340714169 | 201 | PREDICTED: flavin reductase-like [Bombus | 0.772 | 0.726 | 0.433 | 1e-36 | |
| 4502419 | 206 | flavin reductase (NADPH) [Homo sapiens] | 0.772 | 0.708 | 0.449 | 1e-36 | |
| 544759 | 204 | biliverdin-IX beta reductase isozyme I { | 0.772 | 0.715 | 0.449 | 2e-36 |
| >gi|240848791|ref|NP_001155793.1| flavin reductase [Acyrthosiphon pisum] gi|239799383|dbj|BAH70615.1| ACYPI009272 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 121/190 (63%), Gaps = 44/190 (23%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
MKKIAIFGATGMTGLC++EAALKQG
Sbjct: 1 MKKIAIFGATGMTGLCTVEAALKQG----------------------------------- 25
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
LEV LLRDP R+P E +VE+I GDVL DV K +EG+D +VV LGTRN
Sbjct: 26 --------LEVRALLRDPSRMPEELRKQVEVITGDVLVKEDVDKVVEGRDAIVVTLGTRN 77
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DL+PTT+MSEG++NI+++M++ NV +VSVCLS FLFY+ KVP MFH +NDDH+RM ++L
Sbjct: 78 DLAPTTIMSEGLRNILSSMEKNNVKIVSVCLSTFLFYDKPKVPAMFHGINDDHERMLHLL 137
Query: 181 KDS-GLNYIA 189
+ + L++IA
Sbjct: 138 QAAESLDWIA 147
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91087179|ref|XP_975411.1| PREDICTED: similar to CG9471 CG9471-PB [Tribolium castaneum] gi|270010563|gb|EFA07011.1| hypothetical protein TcasGA2_TC009981 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 115/189 (60%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
M K+ IFG+TGMTGLC++EAA+K+G
Sbjct: 1 MNKVVIFGSTGMTGLCAVEAAVKKG----------------------------------- 25
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
L V +RDP +LP S VE++QGDVL DV AI+G +GVVV LGTRN
Sbjct: 26 --------LNVRAFVRDPAKLPENLKSSVEVVQGDVLSYNDVLNAIKGVNGVVVVLGTRN 77
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DL PTT +SEGMKNI+ AMKE NV VVSVCLSAFLFYEP KVPPMF ++N DHQR ++ L
Sbjct: 78 DLKPTTALSEGMKNIIKAMKEANVEVVSVCLSAFLFYEPEKVPPMFKDLNADHQRQFDAL 137
Query: 181 KDSGLNYIA 189
K+S L YIA
Sbjct: 138 KESSLKYIA 146
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|351715418|gb|EHB18337.1| Flavin reductase, partial [Heterocephalus glaber] | Back alignment and taxonomy information |
|---|
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 106/189 (56%), Gaps = 34/189 (17%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++ G+
Sbjct: 3 VKKIAIFGATGRTGLTTLAQAVQAGMSWGWW----------------------------- 33
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
G EV L+RDP RLPSE +I GDV + ADV K + G+D V+V LGT N
Sbjct: 34 -----GYGYEVTVLVRDPSRLPSEGPQPAHVIVGDVRQAADVDKTVAGQDAVIVLLGTGN 88
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTT MSEG +NIVTAMK + V V C SAFL + P+KVPP +V DDH RM+ VL
Sbjct: 89 DLSPTTAMSEGARNIVTAMKAHGVDKVVACTSAFLLWGPAKVPPRLQDVTDDHIRMHKVL 148
Query: 181 KDSGLNYIA 189
++SGL Y+A
Sbjct: 149 QESGLKYVA 157
|
Source: Heterocephalus glaber Species: Heterocephalus glaber Genus: Heterocephalus Family: Bathyergidae Order: Rodentia Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|119577376|gb|EAW56972.1| biliverdin reductase B (flavin reductase (NADPH)), isoform CRA_d [Homo sapiens] | Back alignment and taxonomy information |
|---|
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 109/189 (57%), Gaps = 38/189 (20%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A +C+ LP+ Y
Sbjct: 3 VKKIAIFGATGQTGLTTLAQA-----ALCS------SLPTGY------------------ 33
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
EV L+RD RLPSE ++ GDVL+ ADV K + G+D V+V LGTRN
Sbjct: 34 ---------EVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 84
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++P+KVPP V DDH RM+ VL
Sbjct: 85 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL 144
Query: 181 KDSGLNYIA 189
++SGL Y+A
Sbjct: 145 RESGLKYVA 153
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|350417519|ref|XP_003491462.1| PREDICTED: flavin reductase-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 107/189 (56%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
M +I IFGATG TGLC+L +A+ +GL
Sbjct: 1 MNRIVIFGATGNTGLCALNSAVNKGLN--------------------------------- 27
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
+ +RD ++P+ K+EI+ GDV V AI +D VVV LGTRN
Sbjct: 28 ----------IRAFVRDESKVPTNLKDKIEIVVGDVTNAEQVSNAISNRDAVVVVLGTRN 77
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DL PTTV+S GMKNI+ AMK +NV VVSVCLSAFLFY+P VP +F +VN DHQRM+++L
Sbjct: 78 DLGPTTVLSNGMKNIIDAMKVHNVEVVSVCLSAFLFYKPEAVPNIFKDVNADHQRMFDLL 137
Query: 181 KDSGLNYIA 189
K+S L +IA
Sbjct: 138 KESKLKWIA 146
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242021461|ref|XP_002431163.1| Flavin reductase, putative [Pediculus humanus corporis] gi|212516412|gb|EEB18425.1| Flavin reductase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 120/189 (63%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
M+K+A+FGATGMTG+C+L+ AL G +V KL
Sbjct: 4 MEKLAMFGATGMTGICALKEALDLGFKV--------------------------KL---- 33
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
LLRDP +LPSEY+ KVEI++GDV L DVKK + G DGVVV LGTRN
Sbjct: 34 -------------LLRDPSKLPSEYNDKVEIVKGDVTNLEDVKKTVSGVDGVVVVLGTRN 80
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
+L PTT +S G+KNIV AMKE N+ V+SVCLSAFLFY+ KVPP+F ++N++H RM +VL
Sbjct: 81 NLEPTTDLSNGLKNIVHAMKENNIDVISVCLSAFLFYDLDKVPPVFKDINEEHGRMLDVL 140
Query: 181 KDSGLNYIA 189
K S LNYIA
Sbjct: 141 KSSNLNYIA 149
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|403305326|ref|XP_003943218.1| PREDICTED: flavin reductase (NADPH) [Saimiri boliviensis boliviensis] | Back alignment and taxonomy information |
|---|
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 105/189 (55%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++ G
Sbjct: 3 VKKIAIFGATGQTGLTTLAQAVQAGY---------------------------------- 28
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
EV L+RD RLPSE ++ GDVL+ ADV K + G+D V+V LGTRN
Sbjct: 29 ---------EVTVLVRDSSRLPSEGPQPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 79
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++PSKVPP V DDH RM+ VL
Sbjct: 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPSKVPPRLQAVTDDHIRMHKVL 139
Query: 181 KDSGLNYIA 189
++SGL Y+A
Sbjct: 140 QESGLKYVA 148
|
Source: Saimiri boliviensis boliviensis Species: Saimiri boliviensis Genus: Saimiri Family: Cebidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|340714169|ref|XP_003395604.1| PREDICTED: flavin reductase-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 107/189 (56%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
M +I IFGATG TGLC+L +A+ +GL
Sbjct: 1 MNRIVIFGATGNTGLCALNSAVNKGLN--------------------------------- 27
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
+ +RD ++P+ K+EI+ GDV V AI +D VVV LGTRN
Sbjct: 28 ----------IRAFVRDESKVPTNLKDKIEIVVGDVTNAEQVSNAISNRDAVVVVLGTRN 77
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DL PTTV+S GMKNI+ AMK +NV +VSVCLSAFLFY+P VP +F +VN DHQRM+++L
Sbjct: 78 DLGPTTVLSNGMKNIIDAMKVHNVEIVSVCLSAFLFYKPEAVPNIFKDVNADHQRMFDLL 137
Query: 181 KDSGLNYIA 189
K+S L +IA
Sbjct: 138 KESKLKWIA 146
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|4502419|ref|NP_000704.1| flavin reductase (NADPH) [Homo sapiens] gi|1706870|sp|P30043.3|BLVRB_HUMAN RecName: Full=Flavin reductase (NADPH); Short=FR; AltName: Full=Biliverdin reductase B; Short=BVR-B; AltName: Full=Biliverdin-IX beta-reductase; AltName: Full=Green heme-binding protein; Short=GHBP; AltName: Full=NADPH-dependent diaphorase; AltName: Full=NADPH-flavin reductase; Short=FLR gi|13399607|pdb|1HDO|A Chain A, Human Biliverdin Ix Beta Reductase: Nadp Complex gi|13399608|pdb|1HE2|A Chain A, Human Biliverdin Ix Beta Reductase: NadpBILIVERDIN IX Alpha Ternary Complex gi|13399609|pdb|1HE3|A Chain A, Human Biliverdin Ix Beta Reductase: NadpMESOBILIVERDIN IV Alpha Ternary Complex gi|13399610|pdb|1HE4|A Chain A, Human Biliverdin Ix Beta Reductase: NadpFMN TERNARY COMPLEX gi|13399611|pdb|1HE5|A Chain A, Human Biliverdin Ix Beta Reductase: NadpLUMICHROME TERNARY Complex gi|1384068|dbj|BAA05370.1| NADPH-flavin reductase [Homo sapiens] gi|1480221|dbj|BAA06874.1| biliverdin-IXbeta reductase I [Homo sapiens] gi|32891807|gb|AAP88933.1| biliverdin reductase B (flavin reductase (NADPH)) [Homo sapiens] gi|81674202|gb|AAI09372.1| Biliverdin reductase B (flavin reductase (NADPH)) [Homo sapiens] gi|119577373|gb|EAW56969.1| biliverdin reductase B (flavin reductase (NADPH)), isoform CRA_a [Homo sapiens] gi|189053267|dbj|BAG35073.1| unnamed protein product [Homo sapiens] | Back alignment and taxonomy information |
|---|
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 105/189 (55%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++ G
Sbjct: 3 VKKIAIFGATGQTGLTTLAQAVQAGY---------------------------------- 28
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
EV L+RD RLPSE ++ GDVL+ ADV K + G+D V+V LGTRN
Sbjct: 29 ---------EVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 79
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++P+KVPP V DDH RM+ VL
Sbjct: 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL 139
Query: 181 KDSGLNYIA 189
++SGL Y+A
Sbjct: 140 RESGLKYVA 148
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|544759|gb|AAB29537.1| biliverdin-IX beta reductase isozyme I {EC 1.3.1.24} [human, liver, Peptide, 204 aa] | Back alignment and taxonomy information |
|---|
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 105/189 (55%), Gaps = 43/189 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++ G
Sbjct: 2 VKKIAIFGATGQTGLTTLAQAVQAGY---------------------------------- 27
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
EV L+RD RLPSE ++ GDVL+ ADV K + G+D V+V LGTRN
Sbjct: 28 ---------EVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 78
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++P+KVPP V DDH RM+ VL
Sbjct: 79 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL 138
Query: 181 KDSGLNYIA 189
++SGL Y+A
Sbjct: 139 RESGLKYVA 147
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 189 | ||||||
| UNIPROTKB|P52556 | 206 | BLVRB "Flavin reductase (NADPH | 0.698 | 0.640 | 0.544 | 2e-33 | |
| UNIPROTKB|P30043 | 206 | BLVRB "Flavin reductase (NADPH | 0.698 | 0.640 | 0.537 | 4.1e-33 | |
| UNIPROTKB|E2QVU9 | 206 | BLVRB "Uncharacterized protein | 0.698 | 0.640 | 0.537 | 1.1e-32 | |
| RGD|1306080 | 206 | Blvrb "biliverdin reductase B | 0.698 | 0.640 | 0.522 | 1.8e-32 | |
| RGD|1595363 | 206 | LOC681468 "similar to biliverd | 0.698 | 0.640 | 0.522 | 1.8e-32 | |
| MGI|MGI:2385271 | 206 | Blvrb "biliverdin reductase B | 0.698 | 0.640 | 0.514 | 4.7e-32 | |
| UNIPROTKB|I3LQH7 | 207 | BLVRB "Uncharacterized protein | 0.698 | 0.637 | 0.511 | 1.6e-31 | |
| ZFIN|ZDB-GENE-030131-1516 | 260 | blvrb "biliverdin reductase B | 0.640 | 0.465 | 0.557 | 2.6e-31 | |
| FB|FBgn0037749 | 204 | CG9471 [Drosophila melanogaste | 0.645 | 0.598 | 0.434 | 1.4e-23 | |
| UNIPROTKB|F1M372 | 200 | F1M372 "Uncharacterized protei | 0.693 | 0.655 | 0.425 | 3.8e-23 |
| UNIPROTKB|P52556 BLVRB "Flavin reductase (NADPH)" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 73/134 (54%), Positives = 92/134 (68%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G EV L+RDP RLPSE ++ GDV + ADV K + G+D V+V
Sbjct: 17 LTTLAQAVQA--GYEVTVLVRDPSRLPSEGPQPAHVVVGDVRQPADVDKTVAGQDAVIVL 74
Query: 116 LGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQR 175
LGTRNDLSPTTVMSEG +NIV AMK + V V C SAFL ++PSKVPP +V DDH R
Sbjct: 75 LGTRNDLSPTTVMSEGAQNIVAAMKAHGVDKVVACTSAFLLWDPSKVPPRLQDVTDDHIR 134
Query: 176 MYNVLKDSGLNYIA 189
M+ VL+ SGL Y+A
Sbjct: 135 MHKVLQQSGLKYVA 148
|
|
| UNIPROTKB|P30043 BLVRB "Flavin reductase (NADPH)" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 72/134 (53%), Positives = 92/134 (68%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G EV L+RD RLPSE ++ GDVL+ ADV K + G+D V+V
Sbjct: 17 LTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVL 74
Query: 116 LGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQR 175
LGTRNDLSPTTVMSEG +NIV AMK + V V C SAFL ++P+KVPP V DDH R
Sbjct: 75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR 134
Query: 176 MYNVLKDSGLNYIA 189
M+ VL++SGL Y+A
Sbjct: 135 MHKVLRESGLKYVA 148
|
|
| UNIPROTKB|E2QVU9 BLVRB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 72/134 (53%), Positives = 90/134 (67%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G EV L+RD RLP E ++ GDVL ADV K + G+D V+V
Sbjct: 17 LTTLAQAVQA--GYEVTVLVRDASRLPPEGPQPAHVVVGDVLNAADVDKTVAGQDAVIVL 74
Query: 116 LGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQR 175
LGTRNDLSPTTVMSEG +NIV AMK + V V C SAFL ++PSKVPP V DDH R
Sbjct: 75 LGTRNDLSPTTVMSEGTRNIVMAMKAHGVDKVVACTSAFLLWDPSKVPPRLQAVTDDHIR 134
Query: 176 MYNVLKDSGLNYIA 189
M+ VL++SGL Y+A
Sbjct: 135 MHKVLQESGLKYVA 148
|
|
| RGD|1306080 Blvrb "biliverdin reductase B (flavin reductase (NADPH))" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G EV L+RD RLPSE ++ GDVL+ DV K + G+D V+V
Sbjct: 17 LTTLAQAVQA--GYEVTVLVRDSSRLPSEGPQPAHVVVGDVLQAGDVDKTVAGQDAVIVL 74
Query: 116 LGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQR 175
LGT NDLSPTTVMSEG +NIV AMK + V V C SAFL ++PSKVPP +V DDH R
Sbjct: 75 LGTGNDLSPTTVMSEGTRNIVAAMKAHGVDKVVACTSAFLLWDPSKVPPRLQDVTDDHIR 134
Query: 176 MYNVLKDSGLNYIA 189
M+ +L++SGL Y+A
Sbjct: 135 MHKILEESGLKYVA 148
|
|
| RGD|1595363 LOC681468 "similar to biliverdin reductase B (flavin reductase (NADPH))" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G EV L+RD RLPSE ++ GDVL+ DV K + G+D V+V
Sbjct: 17 LTTLAQAVQA--GYEVTVLVRDSSRLPSEGPQPAHVVVGDVLQAGDVDKTVAGQDAVIVL 74
Query: 116 LGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQR 175
LGT NDLSPTTVMSEG +NIV AMK + V V C SAFL ++PSKVPP +V DDH R
Sbjct: 75 LGTGNDLSPTTVMSEGTRNIVAAMKAHGVDKVVACTSAFLLWDPSKVPPRLQDVTDDHIR 134
Query: 176 MYNVLKDSGLNYIA 189
M+ +L++SGL Y+A
Sbjct: 135 MHKILEESGLKYVA 148
|
|
| MGI|MGI:2385271 Blvrb "biliverdin reductase B (flavin reductase (NADPH))" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 69/134 (51%), Positives = 92/134 (68%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G EV L+RD RLPSE ++ GDV + ADV K + G++ V+V
Sbjct: 17 LTTLAQAVQA--GYEVTVLVRDSSRLPSEGPQPAHVVVGDVRQAADVDKTVAGQEAVIVL 74
Query: 116 LGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQR 175
LGT NDLSPTTVMSEG +NIVTAMK + V V C SAFL ++P+KVPP +V DDH R
Sbjct: 75 LGTGNDLSPTTVMSEGTRNIVTAMKAHGVDKVVACTSAFLLWDPTKVPPRLQDVTDDHIR 134
Query: 176 MYNVLKDSGLNYIA 189
M+ +L++SGL Y+A
Sbjct: 135 MHKILQESGLKYVA 148
|
|
| UNIPROTKB|I3LQH7 BLVRB "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 69/135 (51%), Positives = 92/135 (68%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G EV L+RD RLP+E ++ GDV + ADV K + G+D ++V
Sbjct: 17 LTTLAQAVQA--GYEVTVLVRDVSRLPAEGPQPAHVVVGDVRQAADVDKTVAGQDAIIVL 74
Query: 116 LGTRNDLS-PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQ 174
LGTRNDLS PTTVMSEG +NIV AMK + V V C SAFL ++PSKVPP +V DDH
Sbjct: 75 LGTRNDLSSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPSKVPPRLQDVTDDHI 134
Query: 175 RMYNVLKDSGLNYIA 189
RM+ +L++SGL Y+A
Sbjct: 135 RMHKILQESGLKYVA 149
|
|
| ZFIN|ZDB-GENE-030131-1516 blvrb "biliverdin reductase B (flavin reductase (NADPH))" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 68/122 (55%), Positives = 85/122 (69%)
Query: 68 GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTV 127
G V L+RDP RLP + H ++ GDVL DVKK +EG+D V++ LGTRNDLSPTT+
Sbjct: 29 GYNVTVLVRDPARLPPD-HKASRVVVGDVLNKNDVKKTLEGQDAVIIILGTRNDLSPTTM 87
Query: 128 MSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSGLNY 187
MSEG +NIV MK + V C+SAFL ++ SKVPP V +DH RMY VLK+SGL+Y
Sbjct: 88 MSEGTRNIVEVMKARGIRKVVGCMSAFLLWDRSKVPPRLVPVTEDHDRMYTVLKESGLDY 147
Query: 188 IA 189
IA
Sbjct: 148 IA 149
|
|
| FB|FBgn0037749 CG9471 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 53/122 (43%), Positives = 80/122 (65%)
Query: 68 GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTV 127
GL V L R + +P + SKVE+++GDV DV++ IEG D V V LGTRN L TT
Sbjct: 25 GLSVKLLYRSEKTVPERFKSKVELVKGDVTNYEDVQRVIEGVDAVAVILGTRNKLEATTE 84
Query: 128 MSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSGLNY 187
+S G +N++ AMKE ++ S+ +S+FL ++VP +FH +N++HQRM ++ K L++
Sbjct: 85 LSRGTENLIKAMKEAKLTKFSIVMSSFLLRPLNEVPTVFHRLNEEHQRMLDLTKACDLDW 144
Query: 188 IA 189
IA
Sbjct: 145 IA 146
|
|
| UNIPROTKB|F1M372 F1M372 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 57/134 (42%), Positives = 82/134 (61%)
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115
L + +A++ G +V L+RD RLPSE ++ GDV + ADV K + G+D V++
Sbjct: 17 LTTLAQAVQA--GYKVTVLVRDSSRLPSEGPQPAHMVVGDVQQAADVDKTVAGQDAVIML 74
Query: 116 LGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQR 175
LG NDLSPTT MSEG +IV AMK + V C A L ++P K P + ++ DDH R
Sbjct: 75 LGIGNDLSPTTGMSEGTWDIVAAMKAHGVDKAVACTLALLLWDPIKCPRL-QDLTDDHIR 133
Query: 176 MYNVLKDSGLNYIA 189
M+ +L++SGL +A
Sbjct: 134 MHKILQESGLKCVA 147
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P52556 | BLVRB_BOVIN | 1, ., 3, ., 1, ., 2, 4 | 0.4497 | 0.7724 | 0.7087 | yes | N/A |
| P30043 | BLVRB_HUMAN | 1, ., 3, ., 1, ., 2, 4 | 0.4497 | 0.7724 | 0.7087 | yes | N/A |
| Q923D2 | BLVRB_MOUSE | 1, ., 3, ., 1, ., 2, 4 | 0.4338 | 0.7724 | 0.7087 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 189 | |||
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 2e-45 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 2e-15 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 2e-11 | |
| cd05267 | 203 | cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | 3e-09 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 3e-08 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 3e-08 | |
| COG2910 | 211 | COG2910, COG2910, Putative NADH-flavin reductase [ | 5e-08 | |
| cd05267 | 203 | cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | 1e-05 | |
| PRK05865 | 854 | PRK05865, PRK05865, hypothetical protein; Provisio | 9e-05 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 1e-04 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 1e-04 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 2e-04 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 3e-04 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 3e-04 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-04 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 4e-04 | |
| cd08947 | 224 | cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio | 0.001 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 0.002 | |
| cd05250 | 214 | cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical | 0.002 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 2e-45
Identities = 77/196 (39%), Positives = 100/196 (51%), Gaps = 53/196 (27%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
KIAI GATG TG + AL +G EV L+RDP +LP+E
Sbjct: 1 KIAIIGATGRTGSAIVREALARGHEVTALVRDPAKLPAE--------------------- 39
Query: 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL 122
H K++++QGDVL L DVK+A+EG+D V+ ALGTRNDL
Sbjct: 40 -----------------------HEKLKVVQGDVLDLEDVKEALEGQDAVISALGTRNDL 76
Query: 123 SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKV---------PPMFHNVNDDH 173
SPTT+ SEG +NIV+AMK V + V A + KV PP V +DH
Sbjct: 77 SPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDDRPKVTLVLDTLLFPPALRRVAEDH 136
Query: 174 QRMYNVLKDSGLNYIA 189
RM VL++SGL++ A
Sbjct: 137 ARMLKVLRESGLDWTA 152
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 2e-15
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 59/190 (31%)
Query: 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI 63
IA+ GATG TG ++ L +G +V L R+P + P
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP------------------------ 36
Query: 64 EGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS 123
V +Q D+ LAD+ +A+ G D VV A G R D S
Sbjct: 37 ----------------------APGVTPVQKDLFDLADLAEALAGVDAVVDAFGARPDDS 74
Query: 124 PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY--EPSKV----PPMFHNVNDDHQRMY 177
+G+K+++ A V + V +SA Y EP P+F
Sbjct: 75 ------DGVKHLLDAAARAGVRRI-VVVSAAGLYRDEPGTFRLDDAPLFPPYARAKAAAE 127
Query: 178 NVLKDSGLNY 187
+L+ SGL++
Sbjct: 128 ELLRASGLDW 137
|
Length = 182 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 2e-11
Identities = 44/189 (23%), Positives = 62/189 (32%), Gaps = 48/189 (25%)
Query: 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI 63
I I GATG G L+QG EV TLL
Sbjct: 1 ILILGATGFIGRALARELLEQGHEV-TLLV------------------------------ 29
Query: 64 EGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL- 122
R+ +RL E V +++GD+ L + A++G D V+ G D
Sbjct: 30 ------------RNTKRLSKEDQEPVAVVEGDLRDLDSLSDAVQGVDVVIHLAGAPRDTR 77
Query: 123 SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE---PSKVPPMFHNVNDDHQRMYNV 179
V EG +N++ A KE V S Y P + V
Sbjct: 78 DFCEVDVEGTRNVLEAAKEAGVKHFIFISSLG-AYGDLHEETEPSPSSPYLAVKAKTEAV 136
Query: 180 LKDSGLNYI 188
L+++ L Y
Sbjct: 137 LREASLPYT 145
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 3e-09
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 18/130 (13%)
Query: 66 KDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT 125
+E+ LR+ RL ++V +++GD L D+K A+ G+D V LG +
Sbjct: 23 NSNVELTLFLRNAHRLLHLKSARVTVVEGDALNSDDLKAAMRGQDVVYANLGG----TDL 78
Query: 126 TVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDD--------HQRMY 177
+E N+V AMK V + S ++ E VP F N + +++
Sbjct: 79 DQQAE---NVVQAMKAVGVKRLIWTTSLGIYDE---VPGKFGEWNKEFIGNYLAPYRKSA 132
Query: 178 NVLKDSGLNY 187
V+++S L+Y
Sbjct: 133 AVIENSDLDY 142
|
These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 3e-08
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 59 VKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGT 118
V++ + G +V L+RDP + + E++ GD+ + A+EG D V+ A G+
Sbjct: 16 VRELL--DRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAALEGIDAVISAAGS 73
Query: 119 RN--DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRM 176
V +G N++ A K+ V V +S+ +PS D ++
Sbjct: 74 GGKGGPRTEAVDYDGNINLIDAAKKAGVKRF-VLVSSIGADKPSHPLEALGPYLDAKRKA 132
Query: 177 YNVLKDSGLNYI 188
+ L+ SGL+Y
Sbjct: 133 EDYLRASGLDYT 144
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 3e-08
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
K+ + GATG G + L +G +V L+RDP + + E++ GD+ + A
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAA 60
Query: 63 IEGKDGLEVCTL 74
+EG D + +
Sbjct: 61 LEGIDAV-ISAA 71
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 5e-08
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKK 61
KIAI GA+G G L+ ALK+G EV ++R+ +L + V I+Q D+ L +
Sbjct: 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLAS 58
Query: 62 AIEGKD 67
+ G D
Sbjct: 59 DLAGHD 64
|
Length = 211 |
| >gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 1e-05
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 2 KKIAIFGATGMTGLCSLEAAL----KQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLA 57
KK+ I GA G + EA +E+ LR+ RL ++V +++GD L
Sbjct: 1 KKVLILGANGEI---AREATTMLLENSNVELTLFLRNAHRLLHLKSARVTVVEGDALNSD 57
Query: 58 DVKKAIEGKD 67
D+K A+ G+D
Sbjct: 58 DLKAAMRGQD 67
|
These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 9e-05
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
+IA+ GA+G+ G L QG EV + R P + S + I D+ V+ A
Sbjct: 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIAR---HRPDSWPSSADFIAADIRDATAVESA 58
Query: 63 IEGKDGLEVCTLLRDP 78
+ G D + C +R
Sbjct: 59 MTGADVVAHCAWVRGR 74
|
Length = 854 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 1e-04
Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKL-ADVKKA 62
I + GA G G L L V + +R P KVE ++ D+ A
Sbjct: 1 ILVTGAAGGLGR-LLARRLAASPRVIGVDGLDRRRPPGSPPKVEYVRLDIRDPAAADVFR 59
Query: 63 IEGKDGLEVCTLLRDPQRLPSEYHS 87
D + + DP R +E H
Sbjct: 60 EREADAVVHLAFILDPPRDGAERHR 84
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI 63
I + GATG G L+ G V L+R +R + E++ GD+ A + A+
Sbjct: 1 ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAEVVVGDLDDPAVLAAAL 60
Query: 64 EGKDGLEVCT 73
G D +
Sbjct: 61 AGVDAVFFLA 70
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 2e-04
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 8 GATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKD 67
GATG G + A L QG V L+R VE+++GD+ A + A++G D
Sbjct: 5 GATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDGLPVEVVEGDLTDAASLAAAMKGCD 64
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 3e-04
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSK-VEIIQGDVLKLADVK 60
KI + GATG G + L +G EV +R+P+ + + VE++ GD+ +
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAA--LAGGVEVVLGDLRDPKSLV 58
Query: 61 KAIEGKDGLEVCTLLRDPQR 80
+G DG+ + + L D
Sbjct: 59 AGAKGVDGVLLISGLLDGSD 78
|
Length = 275 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 3e-04
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI 63
I + GATG G +E L + V L+R+P++ + VE+ QGD +++A
Sbjct: 1 ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGVEVRQGDYDDPETLERAF 60
Query: 64 EGKDGL 69
EG D L
Sbjct: 61 EGVDRL 66
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 4e-04
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 2 KKIAIFGATGMTG--LCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADV 59
+I + G G G L E L G +V L R L S VE + D+ V
Sbjct: 1 MRILVTGGAGFIGSHLV--ERLLAAGHDVRGLDRLRDGLD-PLLSGVEFVVLDLTDRDLV 57
Query: 60 KKAIEGKD 67
+ +G
Sbjct: 58 DELAKGVP 65
|
Length = 314 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 4e-04
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSEYHSKVEIIQGDVLKLADVKKA 62
+ + GATG G + L++G +V L+R P++L + +V +++GD+ ++ A
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAA 60
Query: 63 IEGKD 67
+EG D
Sbjct: 61 LEGID 65
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.001
Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 16/165 (9%)
Query: 4 IAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
IA+ GATG G + L +G +V ++R+ ++ + VE+ QGD + ++KA
Sbjct: 1 IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATLADQGVEVRQGDYNQPELLQKA 60
Query: 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL 122
G L + T Y + +EI QG + A + + G
Sbjct: 61 FAGASKLFIIT--------GPHYDNTLEIKQGKNV----ADAARRAGVKHIYSTGYAFAE 108
Query: 123 SPTTVMSEGMKNIVTAMKEYNVSVVSV---CLSAFLFYEPSKVPP 164
++ + A++ + + + E
Sbjct: 109 ESAIPLAHVKLAVEYAIRTTGIPYTFLRNGLYTENFVSEGLPAAD 153
|
Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.002
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSK--VEIIQGDVLKLADVKK 61
I +FGATG G + A+LK G V L+RDP+ ++ VE+++GD+ + +
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVE 60
Query: 62 AIEGKDG 68
A++G D
Sbjct: 61 ALKGVDV 67
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.002
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLAD 58
K + GATG+ G L LK +V ++R L K+ I D +L +
Sbjct: 1 KTALVLGATGLVGKHLLRELLKSPYYSKVTAIVRRK--LTFPEAKEKLVQIVVDFERLDE 58
Query: 59 VKKAIEGKD 67
+A + D
Sbjct: 59 YLEAFQNPD 67
|
Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 189 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.86 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.85 | |
| KOG1502|consensus | 327 | 99.85 | ||
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.84 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.83 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.82 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.78 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.77 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.77 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.77 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.77 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.76 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.76 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.76 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.75 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.75 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.75 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.74 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.73 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.73 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.73 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.72 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.72 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.72 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.72 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.72 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.71 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.71 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.7 | |
| KOG1430|consensus | 361 | 99.7 | ||
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.69 | |
| KOG1371|consensus | 343 | 99.69 | ||
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.69 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.69 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.69 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.69 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.69 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.68 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.68 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.68 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.68 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.67 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.67 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.67 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.66 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.66 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.66 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.66 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.65 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.65 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.65 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.65 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.65 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.65 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.65 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.64 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.64 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.64 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.63 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.62 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.62 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.62 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.62 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.61 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.61 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.61 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.61 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.61 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.6 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.6 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.59 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.59 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.59 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.59 | |
| KOG1205|consensus | 282 | 99.58 | ||
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.58 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.57 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.57 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.57 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.57 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.56 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.55 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.55 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.54 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.54 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.54 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.53 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.53 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.53 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.53 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.52 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.52 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.52 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.52 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.52 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.52 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.52 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.52 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.52 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.51 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.51 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.51 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.51 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.51 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.51 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.51 | |
| KOG1203|consensus | 411 | 99.51 | ||
| PRK08643 | 256 | acetoin reductase; Validated | 99.51 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.51 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.51 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.5 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.5 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.5 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.5 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.49 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.49 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.49 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.48 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.48 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.48 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.48 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.48 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.47 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.47 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.47 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.46 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.46 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.46 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.46 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.46 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.46 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.46 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.45 | |
| KOG1429|consensus | 350 | 99.45 | ||
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.45 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.45 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.45 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.45 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.44 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.44 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.44 | |
| KOG1201|consensus | 300 | 99.44 | ||
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.43 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.43 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.43 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.42 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.41 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.41 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.41 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.41 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.4 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.4 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.4 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.39 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.38 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.37 | |
| KOG2865|consensus | 391 | 99.36 | ||
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.36 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.36 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.36 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.36 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.35 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.35 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.35 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.34 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.34 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.34 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.33 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.33 | |
| KOG0725|consensus | 270 | 99.31 | ||
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.31 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.31 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.3 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.3 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.29 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| KOG0747|consensus | 331 | 99.28 | ||
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.27 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.26 | |
| KOG1209|consensus | 289 | 99.26 | ||
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.25 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.25 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.24 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.23 | |
| KOG1611|consensus | 249 | 99.23 | ||
| KOG4039|consensus | 238 | 99.22 | ||
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.22 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.21 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.2 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| KOG1221|consensus | 467 | 99.19 | ||
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.18 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.18 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.16 | |
| KOG1208|consensus | 314 | 99.16 | ||
| KOG1014|consensus | 312 | 99.1 | ||
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.09 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.06 | |
| KOG4169|consensus | 261 | 99.05 | ||
| KOG1610|consensus | 322 | 99.05 | ||
| PRK06720 | 169 | hypothetical protein; Provisional | 99.03 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.94 | |
| KOG1200|consensus | 256 | 98.92 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.9 | |
| KOG1210|consensus | 331 | 98.89 | ||
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.89 | |
| KOG4288|consensus | 283 | 98.76 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.74 | |
| KOG1431|consensus | 315 | 98.73 | ||
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.73 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.71 | |
| KOG1372|consensus | 376 | 98.57 | ||
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.57 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.53 | |
| KOG1207|consensus | 245 | 98.51 | ||
| KOG2733|consensus | 423 | 98.47 | ||
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.45 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.45 | |
| PLN00106 | 323 | malate dehydrogenase | 98.45 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.43 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.41 | |
| KOG1199|consensus | 260 | 98.34 | ||
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.33 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.3 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.29 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.24 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.24 | |
| KOG2774|consensus | 366 | 98.24 | ||
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.22 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.12 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.04 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.03 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.02 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 98.0 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.99 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.98 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.98 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.97 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.94 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.94 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.93 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.92 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.91 | |
| KOG1478|consensus | 341 | 97.9 | ||
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.89 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.89 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.87 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.85 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.84 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.83 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.81 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.78 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.77 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.72 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.71 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.71 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.7 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.66 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.64 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.63 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.61 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.59 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.59 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.56 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.54 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.54 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 97.51 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.5 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.49 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.49 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 97.49 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.48 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.47 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 97.46 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.43 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.43 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.42 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.42 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.41 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.41 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.4 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.39 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 97.39 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.37 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.37 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.36 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.36 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 97.35 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.35 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.35 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.34 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.33 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.33 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.33 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.33 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.33 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.32 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.32 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.31 | |
| KOG0409|consensus | 327 | 97.3 | ||
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.28 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.26 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.24 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.21 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.2 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.19 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 97.19 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.18 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.18 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.18 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.18 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 97.17 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.16 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.16 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.15 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.15 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 97.14 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.14 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.13 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.12 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 97.1 | |
| KOG1204|consensus | 253 | 97.08 | ||
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.07 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.07 | |
| COG1023 | 300 | Gnd Predicted 6-phosphogluconate dehydrogenase [Ca | 97.06 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 97.06 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.05 | |
| KOG0172|consensus | 445 | 97.03 | ||
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.03 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.02 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.02 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 97.01 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.99 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.98 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.98 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.96 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.96 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 96.95 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.95 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.94 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.93 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.91 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.9 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.88 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.88 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.87 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.87 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.86 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.85 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.85 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.85 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.85 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.83 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.82 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.81 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 96.81 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.8 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 96.8 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.79 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 96.78 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.77 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.77 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 96.77 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.76 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.76 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.75 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 96.74 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.74 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.73 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.71 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.69 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.65 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.64 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.63 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.63 | |
| PRK12439 | 341 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.63 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 96.62 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 96.61 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 96.59 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.59 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.58 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.58 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.57 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.57 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.57 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.54 | |
| KOG4777|consensus | 361 | 96.54 | ||
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 96.54 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.52 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.51 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.5 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.49 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.49 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.49 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.47 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 96.46 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 96.45 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.44 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.44 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.43 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 96.38 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.38 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 96.37 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 96.36 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.34 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.33 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 96.32 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.31 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.31 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.31 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.3 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.3 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 96.28 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 96.27 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.25 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 96.24 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.24 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.23 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-21 Score=147.36 Aligned_cols=141 Identities=21% Similarity=0.236 Sum_probs=112.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+||||.|+||++.+.+|++.|++|++++.-.....+.... ...++.+|+.|.+.+++.++..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-------------- 66 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-------------- 66 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc--------------
Confidence 6899999999999999999999999999998754433322111 1578888888888887777654
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++|+|+|++|...- ...++.|+.+|.+|+++|++.|+++|||-||+
T Consensus 67 ---------------------------~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStA 119 (329)
T COG1087 67 ---------------------------KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTA 119 (329)
T ss_pred ---------------------------CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecch
Confidence 35888888875432 23467899999999999999999999998888
Q ss_pred eeecCCCCCC-------CCCccchhhHHHHHHHhhhc
Q psy3626 154 FLFYEPSKVP-------PMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 154 ~~~~~~~~~p-------~~~~~~~~~~~~~~~~l~~~ 183 (189)
.+|+++...| .+.+||..+|...|++|++.
T Consensus 120 avYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 120 AVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDA 156 (329)
T ss_pred hhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHH
Confidence 8888765543 45689999999999999843
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.2e-21 Score=152.13 Aligned_cols=139 Identities=18% Similarity=0.214 Sum_probs=101.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+|||||||+|++++++|+++|++|++++|+++....+...+++++.+|+++++++.+++++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g---------------- 64 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKG---------------- 64 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCC----------------
Confidence 5899999999999999999999999999999986544332223456666666666655555554
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC--CCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND--LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEP 159 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~--~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~ 159 (189)
+|++||+++.... ....++|+.++.+++++|++.+++|||++||......
T Consensus 65 ---------------------------~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~- 116 (317)
T CHL00194 65 ---------------------------VTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY- 116 (317)
T ss_pred ---------------------------CCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc-
Confidence 4555555443221 1234568899999999999999999999998643211
Q ss_pred CCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 160 SKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 160 ~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
...++...|.+.|+++++++++||+
T Consensus 117 -----~~~~~~~~K~~~e~~l~~~~l~~ti 141 (317)
T CHL00194 117 -----PYIPLMKLKSDIEQKLKKSGIPYTI 141 (317)
T ss_pred -----CCChHHHHHHHHHHHHHHcCCCeEE
Confidence 1124667888999999999999974
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-21 Score=150.43 Aligned_cols=122 Identities=25% Similarity=0.347 Sum_probs=88.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+++|+||||+||||++++++|+++||+|++..|++++.... +..+.++++
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~----------------~~L~~l~~a-------------- 55 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT----------------EHLRKLEGA-------------- 55 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH----------------HHHHhcccC--------------
Confidence 36899999999999999999999999999999998873321 000111111
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------cceehhhHHHHHHHHHHCC-ccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------TTVMSEGMKNIVTAMKEYN-VSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~ 153 (189)
.++..++.+|+.+++.+.+++.++|+|+|+|.+..+... .+..++|+.|++++|++.+ ++|||++||.
T Consensus 56 -----~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~ 130 (327)
T KOG1502|consen 56 -----KERLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSST 130 (327)
T ss_pred -----cccceEEeccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccH
Confidence 224555555555555666666666777777776544321 2468999999999999987 9999999998
Q ss_pred eeec
Q psy3626 154 FLFY 157 (189)
Q Consensus 154 ~~~~ 157 (189)
++..
T Consensus 131 aAv~ 134 (327)
T KOG1502|consen 131 AAVR 134 (327)
T ss_pred HHhc
Confidence 7764
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-20 Score=137.86 Aligned_cols=135 Identities=35% Similarity=0.532 Sum_probs=105.3
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCCc
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLPS 83 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (189)
|+|+||||++|+.++++|+++|++|+++.|++++.+. ..+++++.+|+.++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~--------------------------- 51 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDP--------------------------- 51 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCH---------------------------
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhh---------------------------
Confidence 7999999999999999999999999999999876554 34455555555544
Q ss_pred cccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCC--
Q psy3626 84 EYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSK-- 161 (189)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~-- 161 (189)
+.+.+++.++|++|+++|.... ....++++++++++.+++++|++||...+.+.+.
T Consensus 52 ----------------~~~~~al~~~d~vi~~~~~~~~------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~ 109 (183)
T PF13460_consen 52 ----------------DSVKAALKGADAVIHAAGPPPK------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLF 109 (183)
T ss_dssp ----------------HHHHHHHTTSSEEEECCHSTTT------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEE
T ss_pred ----------------hhhhhhhhhcchhhhhhhhhcc------cccccccccccccccccccceeeeccccCCCCCccc
Confidence 4555555566778888776554 2788999999999999999999999987765433
Q ss_pred ---CCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 162 ---VPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 162 ---~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
.+..+..+...+.+.|+.+++++++||+
T Consensus 110 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i 140 (183)
T PF13460_consen 110 SDEDKPIFPEYARDKREAEEALRESGLNWTI 140 (183)
T ss_dssp EGGTCGGGHHHHHHHHHHHHHHHHSTSEEEE
T ss_pred ccccccchhhhHHHHHHHHHHHHhcCCCEEE
Confidence 1233456778888999999999999974
|
... |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-20 Score=145.45 Aligned_cols=136 Identities=20% Similarity=0.249 Sum_probs=95.9
Q ss_pred EEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCC--cccCCc-eeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 5 AIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLP--SEYHSK-VEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 5 ~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~--~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+||||+||+|++++++|+++| ++|+++++.+.... ...... .+++.+|+++++++.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~------------------- 61 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLE------------------- 61 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHH-------------------
Confidence 699999999999999999999 78999988765433 111111 225555555555554
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------CcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------PTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++++++|+|||+++...... ..++|+.|++|++++|++.+++||||+||.
T Consensus 62 ------------------------~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~ 117 (280)
T PF01073_consen 62 ------------------------EALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSI 117 (280)
T ss_pred ------------------------HHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 44555566666665433221 246899999999999999999999999999
Q ss_pred eeecC---CCC-------C---CCCCccchhhHHHHHHHhhhc
Q psy3626 154 FLFYE---PSK-------V---PPMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 154 ~~~~~---~~~-------~---p~~~~~~~~~~~~~~~~l~~~ 183 (189)
.++.+ ... . +.....|..+|..+|+.+.+.
T Consensus 118 ~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 118 SVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred ceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence 88765 111 1 124456788899999888753
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-19 Score=146.91 Aligned_cols=156 Identities=20% Similarity=0.153 Sum_probs=107.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||+|++++++|+++|++|++++|......... .......
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------------~~~~~~~-------------- 63 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNL-----------------DDVRTSV-------------- 63 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhh-----------------hhhhhcc--------------
Confidence 589999999999999999999999999999998654322100 0000000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
+.....++..+.+|+.+.+.+.+.++++|+|||+++..... ...++|+.++.+++++|++.++++||++||+
T Consensus 64 -~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~ 142 (348)
T PRK15181 64 -SEEQWSRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASS 142 (348)
T ss_pred -ccccCCceEEEEccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeech
Confidence 00001245666777777767777777778888888753321 1245899999999999999999999999999
Q ss_pred eeecCCCCC-------CCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSKV-------PPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~~-------p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.+++..+.. +.+..+|..+|...|..++ +.+++++
T Consensus 143 ~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 188 (348)
T PRK15181 143 STYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSYEFNAI 188 (348)
T ss_pred HhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHhCCCEE
Confidence 887643221 2344568888888887765 3356554
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=138.88 Aligned_cols=152 Identities=20% Similarity=0.288 Sum_probs=102.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||+|++++++|+++|++|+++.|+.+..... .+.. +.+.
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~----------------~~~~-~~~~-------------- 58 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT----------------HLRE-LEGG-------------- 58 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH----------------HHHH-hhCC--------------
Confidence 57899999999999999999999999999999975432110 0000 0000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--CCcceehhhHHHHHHHHHHCCccEEEEeccce-eec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF-LFY 157 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~-~~~ 157 (189)
..++.++.+|+.+.+.+.+++.++|+|||+++..... ...+.|+.++.+++++|++.++++||++||.. .++
T Consensus 59 -----~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg 133 (342)
T PLN02214 59 -----KERLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYM 133 (342)
T ss_pred -----CCcEEEEecCcCChHHHHHHHhcCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeec
Confidence 1134555666666666666677778888888764322 22457899999999999999999999999965 443
Q ss_pred CCCCCC----------------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 158 EPSKVP----------------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 158 ~~~~~p----------------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.....+ .+...|..+|...|+++. +.+++++
T Consensus 134 ~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v 184 (342)
T PLN02214 134 DPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLV 184 (342)
T ss_pred cCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 211100 123357777888887775 3366654
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.3e-18 Score=132.11 Aligned_cols=147 Identities=25% Similarity=0.325 Sum_probs=100.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+|+||||+|++|+.++++|+++|++|+++.|++++..... ..+++++.+|+++.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---------------------- 74 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---------------------- 74 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC----------------------
Confidence 689999999999999999999999999999999876543211 12355555555542
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCC---CCCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRND---LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~---~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
...+.+.+ .++|++|+++|.... .....+|..++.++++++++.++++||++||..
T Consensus 75 --------------------~~~l~~~~~~~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 75 --------------------SDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred --------------------HHHHHHHhhcCCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 23334444 356777777665321 122456788999999999999999999999987
Q ss_pred eecCCCCCC--CC------CccchhhHHHHHHHhhhcCCCCCC
Q psy3626 155 LFYEPSKVP--PM------FHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 155 ~~~~~~~~p--~~------~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
++......+ .. +..+...+...|+++++++++||+
T Consensus 135 v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~i 177 (251)
T PLN00141 135 VNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTI 177 (251)
T ss_pred ccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 654321111 11 112234567778888888888874
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.6e-18 Score=140.26 Aligned_cols=168 Identities=17% Similarity=0.123 Sum_probs=103.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|........ ........-.....+.++......
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-------------- 111 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDH-QLGLDSLTPIASIHERVRRWKEVS-------------- 111 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccc-cccccccccccchHHHHHHHHHhh--------------
Confidence 57999999999999999999999999999987532111000 000000000000000111100000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC----CC------cceehhhHHHHHHHHHHCCcc-EE
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL----SP------TTVMSEGMKNIVTAMKEYNVS-VV 147 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~----~~------~~~~~~~~~~ll~~~~~~~~~-~~ 147 (189)
..++.++.+|+.+.+.+.++++ ++|+|||+++..... .+ .++|+.++.+++++|++.+++ +|
T Consensus 112 -----~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~ 186 (442)
T PLN02572 112 -----GKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHL 186 (442)
T ss_pred -----CCcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 1145566677777766666665 478888887643211 11 247999999999999998875 99
Q ss_pred EEeccceeecCCCC--------------------CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 148 SVCLSAFLFYEPSK--------------------VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 148 i~iSS~~~~~~~~~--------------------~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
|++||..+|+.... ...+..+|..+|...|.+++ ..+++++
T Consensus 187 V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v 251 (442)
T PLN02572 187 VKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRAT 251 (442)
T ss_pred EEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEE
Confidence 99999988864210 11234578888888887775 2366654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.7e-18 Score=138.68 Aligned_cols=150 Identities=11% Similarity=0.077 Sum_probs=99.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+|||||||||++++++|+++ |++|++++|+.+....+....
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~----------------------------------- 59 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPD----------------------------------- 59 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccc-----------------------------------
Confidence 68999999999999999999998 699999998754432211000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----C---CcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----S---PTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~---~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
...|+.+++++.+|+.+.+.+.+++.++|+|||+++..... . ....|+.++.+++++|++.+ ++||++||.
T Consensus 60 -~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~ 137 (386)
T PLN02427 60 -TVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC 137 (386)
T ss_pred -cccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeee
Confidence 00112245555556655555666666667777777643211 1 12368889999999999887 899999999
Q ss_pred eeecCCCC------CC-----------------------CCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 154 FLFYEPSK------VP-----------------------PMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~------~p-----------------------~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
.+|+.... .| .+...|..+|...|+++.. .+++++
T Consensus 138 ~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 205 (386)
T PLN02427 138 EVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFT 205 (386)
T ss_pred eeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceE
Confidence 88764210 01 0113577788888888863 356654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.7e-18 Score=135.64 Aligned_cols=149 Identities=14% Similarity=0.139 Sum_probs=95.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|+++..... .+....+..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~----------------~~~~~~~~~--------------- 49 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQ----------------RIEHIYEDP--------------- 49 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchh----------------hhhhhhhcc---------------
Confidence 5899999999999999999999999999999986432100 000000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCCC-------CcceehhhHHHHHHHHHHCCcc---EEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDLS-------PTTVMSEGMKNIVTAMKEYNVS---VVSV 149 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~~~---~~i~ 149 (189)
+......+.++.+|+.|.+.+.+.+. ++|+|||+++...... ..++|+.++.+++++|++.+++ +||+
T Consensus 50 ~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~ 129 (343)
T TIGR01472 50 HNVNKARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQ 129 (343)
T ss_pred ccccccceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEE
Confidence 00001133444445555444444444 3577888877543211 1235778999999999998753 8999
Q ss_pred eccceeecCCCC-------CCCCCccchhhHHHHHHHhh
Q psy3626 150 CLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 150 iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~ 181 (189)
+||..+++.... ...+..+|..+|...|.+++
T Consensus 130 ~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~ 168 (343)
T TIGR01472 130 ASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITV 168 (343)
T ss_pred eccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 999988764221 12345678888998888775
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=138.21 Aligned_cols=144 Identities=19% Similarity=0.200 Sum_probs=99.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCccc-CCceeEEecccc-ChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEY-HSKVEIIQGDVL-KLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+|+||||+||+|++++++|+++ |++|++++|+......+. ..+++++.+|+. +.+.+.++++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------------- 67 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK------------- 67 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc-------------
Confidence 899999999999999999999987 799999998754332221 234667777775 4444444444
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
++|+|||+++...+. ...++|+.++.+++++|++.+ +++|++
T Consensus 68 ------------------------------~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~ 116 (347)
T PRK11908 68 ------------------------------KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFP 116 (347)
T ss_pred ------------------------------CCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEE
Confidence 456666665532211 123467899999999999987 799999
Q ss_pred ccceeecCCCC-------CC-------CCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 151 LSAFLFYEPSK-------VP-------PMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 151 SS~~~~~~~~~-------~p-------~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
||..+++.... .| .+..+|..+|...|+.++. .+++++
T Consensus 117 SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 172 (347)
T PRK11908 117 STSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFT 172 (347)
T ss_pred ecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeE
Confidence 99988764221 01 1223577788888887763 466654
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-17 Score=137.76 Aligned_cols=143 Identities=17% Similarity=0.229 Sum_probs=102.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
+++|+||||||++|++++++|+++|++|++++|+++..... ...+++++.+|+++++++.+++++.
T Consensus 60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~------ 133 (390)
T PLN02657 60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE------ 133 (390)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh------
Confidence 46899999999999999999999999999999987544210 0123455555555555544444321
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC--CCCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND--LSPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~--~~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
..++|+||++++.... ....++|..++.++++++++.++++||++
T Consensus 134 ---------------------------------~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~i 180 (390)
T PLN02657 134 ---------------------------------GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLL 180 (390)
T ss_pred ---------------------------------CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEE
Confidence 0046888887765322 22345688899999999999999999999
Q ss_pred ccceeecCCCCCCCCCccchhhHHHHHHHhhh--cCCCCCC
Q psy3626 151 LSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD--SGLNYIA 189 (189)
Q Consensus 151 SS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~--~~~~~t~ 189 (189)
||..++. +...+...|...|+.++. .+++||+
T Consensus 181 SS~~v~~-------p~~~~~~sK~~~E~~l~~~~~gl~~tI 214 (390)
T PLN02657 181 SAICVQK-------PLLEFQRAKLKFEAELQALDSDFTYSI 214 (390)
T ss_pred eeccccC-------cchHHHHHHHHHHHHHHhccCCCCEEE
Confidence 9986542 123466778888888875 7888874
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=133.06 Aligned_cols=131 Identities=16% Similarity=0.142 Sum_probs=97.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++| +|++++|... .+.+|++|++.+.+++++.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~--------------- 53 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKI--------------- 53 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhc---------------
Confidence 589999999999999999999999 7888887532 2346777777776666532
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-------CcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-------PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+|||+++...... ...+|+.++.+++++|++.+. ++|++||+.
T Consensus 54 --------------------------~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~ 106 (299)
T PRK09987 54 --------------------------RPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDY 106 (299)
T ss_pred --------------------------CCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccce
Confidence 3467777766543321 134799999999999999985 899999998
Q ss_pred eecCCCC-------CCCCCccchhhHHHHHHHhhhcCCC
Q psy3626 155 LFYEPSK-------VPPMFHNVNDDHQRMYNVLKDSGLN 186 (189)
Q Consensus 155 ~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~~~~~ 186 (189)
+|.+... .+.+..+|..+|...|+.++....+
T Consensus 107 Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~ 145 (299)
T PRK09987 107 VFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAK 145 (299)
T ss_pred EECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 8864321 2245567888999999988754433
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=136.13 Aligned_cols=144 Identities=16% Similarity=0.020 Sum_probs=96.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+|||||||||+++++.|.++|++|++++|..............++.+|+.+.+.+.++++
T Consensus 22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----------------- 84 (370)
T PLN02695 22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTK----------------- 84 (370)
T ss_pred CEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHh-----------------
Confidence 689999999999999999999999999999986432211111123455566665555444444
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC--------CCCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND--------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~--------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++|+|||+++.... ......|+.++.+++++|++.++++||++||.
T Consensus 85 --------------------------~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~ 138 (370)
T PLN02695 85 --------------------------GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSA 138 (370)
T ss_pred --------------------------CCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCch
Confidence 45566666543210 11134578899999999999999999999998
Q ss_pred eeecCCCC-------------CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSK-------------VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~-------------~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
..|+.... ...+...|...|...|+.+. +.+++++
T Consensus 139 ~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ 190 (370)
T PLN02695 139 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECR 190 (370)
T ss_pred hhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 87753211 01234467778888888765 2466554
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=133.77 Aligned_cols=145 Identities=20% Similarity=0.205 Sum_probs=97.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|+++.|+.+....... +. .++
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------------~~-~~~---------------- 56 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH---------------LR-ALQ---------------- 56 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH---------------HH-hcC----------------
Confidence 4789999999999999999999999999999887543211000 00 000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--CC----cceehhhHHHHHHHHHHC-CccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--SP----TTVMSEGMKNIVTAMKEY-NVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~~----~~~~~~~~~~ll~~~~~~-~~~~~i~iSS~ 153 (189)
..+++.++.+|+.+.+++.+.++++|+|||+++..... .+ .++|+.++.++++++.+. ++++||++||.
T Consensus 57 ----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~ 132 (338)
T PLN00198 57 ----ELGDLKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSA 132 (338)
T ss_pred ----CCCceEEEEcCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecc
Confidence 00134455556555555666666677788887753211 11 256899999999999886 58899999998
Q ss_pred eeecCCC----C----------------CCCCCccchhhHHHHHHHhh
Q psy3626 154 FLFYEPS----K----------------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 154 ~~~~~~~----~----------------~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++..+ . .+.+..+|..+|...|..+.
T Consensus 133 ~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~ 180 (338)
T PLN00198 133 AAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAW 180 (338)
T ss_pred eeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHH
Confidence 8775321 0 11234568888888887665
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=119.26 Aligned_cols=141 Identities=26% Similarity=0.428 Sum_probs=106.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||.|+||||.+|+.+++.++++||+|+++.|+++++... ..+.+.+.|+.++++++..+.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~--------------- 63 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGH--------------- 63 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCC---------------
Confidence 6899999999999999999999999999999999888754 55667777777777766666555
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeec----
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY---- 157 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~---- 157 (189)
|+||++.+...+.. .+.-....+.++..++..++.|++++++++...
T Consensus 64 ----------------------------DaVIsA~~~~~~~~-~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g 114 (211)
T COG2910 64 ----------------------------DAVISAFGAGASDN-DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG 114 (211)
T ss_pred ----------------------------ceEEEeccCCCCCh-hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC
Confidence 55666655543221 122344577889999999999999998876643
Q ss_pred ----CCCCCCCCCccchhhHHHHHHHhh-hcCCCCC
Q psy3626 158 ----EPSKVPPMFHNVNDDHQRMYNVLK-DSGLNYI 188 (189)
Q Consensus 158 ----~~~~~p~~~~~~~~~~~~~~~~l~-~~~~~~t 188 (189)
+.|.+|.+|.+......+..+.|+ +.+++||
T Consensus 115 ~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WT 150 (211)
T COG2910 115 TRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWT 150 (211)
T ss_pred ceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceE
Confidence 456677777666666666668888 5579998
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-18 Score=143.30 Aligned_cols=160 Identities=22% Similarity=0.211 Sum_probs=109.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++++||||+|+||++++++|+++|++|++++|+.+....+. ..+..... . ..+
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~------------------~~l~~~~L-~-~~G------- 133 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLV------------------QSVKQMKL-D-VEG------- 133 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH------------------HHhhhhcc-c-ccc-------
Confidence 47999999999999999999999999999999865543210 00000000 0 000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
.....++.++.+|+.+.+++.+.++++|++|+++|..... ....+|..++.+++++|++.+++|||++||.++.
T Consensus 134 -a~~~~~v~iV~gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 134 -TQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred -ccccCceEEEEecCCCHHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 0001246677778877777778888888888888765321 1245688899999999999999999999998763
Q ss_pred cCC-CC-CCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 157 YEP-SK-VPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 157 ~~~-~~-~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
... +. .......+...+..+++.|.+++++|++
T Consensus 213 ~~g~p~~~~~sk~~~~~~KraaE~~L~~sGIrvTI 247 (576)
T PLN03209 213 KVGFPAAILNLFWGVLCWKRKAEEALIASGLPYTI 247 (576)
T ss_pred ccCccccchhhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 211 10 0111233456788899999999999974
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-17 Score=133.90 Aligned_cols=152 Identities=18% Similarity=0.188 Sum_probs=98.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|+++...... ......
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~------------------~~~~~~--------------- 52 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVK------------------HLLDLP--------------- 52 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHH------------------HHHhcc---------------
Confidence 68999999999999999999999999999999765432210 000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------CCcceehhhHHHHHHHHHHCC-ccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------SPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~ 154 (189)
+...++..+.+|+.+.+.+.+.+.++|+|||+++..... ...++|+.++.+++++|++.+ +++||++||..
T Consensus 53 --~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~ 130 (351)
T PLN02650 53 --GATTRLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAG 130 (351)
T ss_pred --CCCCceEEEEecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchh
Confidence 001134455555555555556666667777777643211 124578999999999999876 78999999986
Q ss_pred eecCCC-CCC-----------------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 155 LFYEPS-KVP-----------------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 155 ~~~~~~-~~p-----------------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.++... ..| .+..+|..+|...|.+++ +.+++++
T Consensus 131 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 186 (351)
T PLN02650 131 TVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFI 186 (351)
T ss_pred hcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 554211 111 112357778888887665 3355543
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.4e-17 Score=129.10 Aligned_cols=144 Identities=21% Similarity=0.208 Sum_probs=103.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||+|++++++|+++|++|++++|......... .++.++.+|+++.+...+..+..
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~--------------- 64 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGV--------------- 64 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcC---------------
Confidence 35999999999999999999999999999999877665433 55667777777765544444443
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------CcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------PTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
.|.|+|+++...... ....|+.++.+++++|++.++++||+.||.
T Consensus 65 ---------------------------~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~ 117 (314)
T COG0451 65 ---------------------------PDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSV 117 (314)
T ss_pred ---------------------------CCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCC
Confidence 056666665443221 246899999999999999999999997776
Q ss_pred eeecCC-CC--------CCCCCccchhhHHHHHHHhhhc----CCCCC
Q psy3626 154 FLFYEP-SK--------VPPMFHNVNDDHQRMYNVLKDS----GLNYI 188 (189)
Q Consensus 154 ~~~~~~-~~--------~p~~~~~~~~~~~~~~~~l~~~----~~~~t 188 (189)
..++.. +. .+.+..+|..+|...|+.+.+. +++++
T Consensus 118 ~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ 165 (314)
T COG0451 118 SVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVV 165 (314)
T ss_pred ceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 666543 11 1122225788899999888743 35554
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=130.10 Aligned_cols=147 Identities=10% Similarity=0.082 Sum_probs=95.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc---c----cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS---E----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+|+|||||||||+++++.|+++|++++++.++...... + ...++.++.+|+.+++++++++++.
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~------- 73 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH------- 73 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-------
Confidence 8999999999999999999999999886554433221110 0 0123445555665555555544421
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHH-----
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKE----- 141 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~----- 141 (189)
++|+|||++|..... ...++|+.++.+++++|.+
T Consensus 74 ----------------------------------~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~ 119 (355)
T PRK10217 74 ----------------------------------QPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNAL 119 (355)
T ss_pred ----------------------------------CCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcc
Confidence 367777777654321 1235789999999999986
Q ss_pred ----CCccEEEEeccceeecCCC--------C-CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 142 ----YNVSVVSVCLSAFLFYEPS--------K-VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 142 ----~~~~~~i~iSS~~~~~~~~--------~-~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.+++++|++||...++... . ...+...|..+|...|.+++ +.+++++
T Consensus 120 ~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~ 183 (355)
T PRK10217 120 TEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTL 183 (355)
T ss_pred cccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeE
Confidence 2467999999987765311 0 11234567788888877775 3455554
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.3e-17 Score=129.39 Aligned_cols=152 Identities=18% Similarity=0.185 Sum_probs=97.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++|+||||+||||++++++|+++|++|+++.|+.+...... ...+..
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------~~~~~~--------------- 52 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTE------------------HLLALD--------------- 52 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHH------------------HHHhcc---------------
Confidence 78999999999999999999999999999999765432110 000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------CCcceehhhHHHHHHHHHHC-CccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------SPTTVMSEGMKNIVTAMKEY-NVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~~~~~~~~~~~~ll~~~~~~-~~~~~i~iSS~~ 154 (189)
+...++.++.+|+.+.+.+.+++.++|++||+++..... ...+.|+.++.+++++|++. +++|||++||..
T Consensus 53 --~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~ 130 (322)
T PLN02986 53 --GAKERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTA 130 (322)
T ss_pred --CCCCceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchh
Confidence 001134455555555555555566667777777653211 11356899999999999986 689999999986
Q ss_pred eec-CCCC-----------C--C----CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 155 LFY-EPSK-----------V--P----PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 155 ~~~-~~~~-----------~--p----~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.+. ..+. + | .+...|..+|...|..+. +.+++|+
T Consensus 131 ~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~ 186 (322)
T PLN02986 131 AVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMV 186 (322)
T ss_pred heecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEE
Confidence 542 1110 0 1 012447777887776554 3466664
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.5e-17 Score=129.47 Aligned_cols=144 Identities=24% Similarity=0.248 Sum_probs=99.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+||+|+++++.|+++|++|++++|+++........+++++.+|+.++++++++++++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--------------- 65 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGC--------------- 65 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCC---------------
Confidence 48999999999999999999999999999999876544333334566666666666655555544
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-----CCCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-----LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-----~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
|++|++++.... ....+.|+.++.++++++++.+++++|++||..++
T Consensus 66 ----------------------------d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~ 117 (328)
T TIGR03466 66 ----------------------------RALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATL 117 (328)
T ss_pred ----------------------------CEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhc
Confidence 555555543211 11234688999999999999999999999998877
Q ss_pred cCCCC-C------C----CCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 157 YEPSK-V------P----PMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 157 ~~~~~-~------p----~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
..... . | .....|...|...|+.+++ .+++++
T Consensus 118 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 164 (328)
T TIGR03466 118 GVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVV 164 (328)
T ss_pred CcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 53111 0 1 1123566778877777763 356554
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.5e-17 Score=128.49 Aligned_cols=119 Identities=18% Similarity=0.275 Sum_probs=84.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|++....... .+.. ..+
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------------~~~~-~~~---------------- 52 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE---------------HLLA-LDG---------------- 52 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH---------------HHHh-ccC----------------
Confidence 68999999999999999999999999999998764322100 0000 000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------CCcceehhhHHHHHHHHHHC-CccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------SPTTVMSEGMKNIVTAMKEY-NVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~~~~~~~~~~~~ll~~~~~~-~~~~~i~iSS~~ 154 (189)
..+++.++.+|+.+++.+.++++++|+|||+++..... ...++|+.++.+++++|.+. ++++||++||..
T Consensus 53 ---~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~ 129 (322)
T PLN02662 53 ---AKERLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMA 129 (322)
T ss_pred ---CCCceEEEeccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHH
Confidence 01245556666666666666677778888887753211 12356899999999999987 889999999976
Q ss_pred e
Q psy3626 155 L 155 (189)
Q Consensus 155 ~ 155 (189)
.
T Consensus 130 ~ 130 (322)
T PLN02662 130 A 130 (322)
T ss_pred H
Confidence 3
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-17 Score=127.28 Aligned_cols=144 Identities=25% Similarity=0.307 Sum_probs=105.5
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
|+|+|||||+|++++++|+++|+.|+.+.|+........ ..++.++.+|+.+++.++++++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---------------- 64 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---------------- 64 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH----------------
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc----------------
Confidence 799999999999999999999999999998876553211 126777788888777777776654
Q ss_pred ccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 83 SEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
+.|+|+++++.... ....+.|+.++++++++|.+.+++++|++||...
T Consensus 65 -------------------------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~ 119 (236)
T PF01370_consen 65 -------------------------NIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASV 119 (236)
T ss_dssp -------------------------TESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGG
T ss_pred -------------------------CceEEEEeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 23667777765421 1223468899999999999999899999999888
Q ss_pred ecCCCCCC-------CCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 156 FYEPSKVP-------PMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 156 ~~~~~~~p-------~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+......+ .+..+|...|...|+.+++ .+++|+
T Consensus 120 y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~ 163 (236)
T PF01370_consen 120 YGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGLRVT 163 (236)
T ss_dssp GTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc
Confidence 77542222 3455677788888887762 255554
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.4e-17 Score=140.10 Aligned_cols=138 Identities=16% Similarity=0.166 Sum_probs=95.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+|+||||+||||++++++|+++ |++|++++|.+....... ..+++++.+|++++.+.
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~------------------- 375 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEW------------------- 375 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHH-------------------
Confidence 579999999999999999999986 799999999765432211 12455566666554331
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
+.+++.++|+|||+++..... ...++|+.++.+++++|++.+ ++|||+|
T Consensus 376 -----------------------l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~S 431 (660)
T PRK08125 376 -----------------------IEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPS 431 (660)
T ss_pred -----------------------HHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEc
Confidence 233344556666666543321 113578999999999999988 8999999
Q ss_pred cceeecCCCCC------------C--CCCccchhhHHHHHHHhh
Q psy3626 152 SAFLFYEPSKV------------P--PMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 152 S~~~~~~~~~~------------p--~~~~~~~~~~~~~~~~l~ 181 (189)
|+.+++..... | .+...|..+|...|++++
T Consensus 432 S~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~ 475 (660)
T PRK08125 432 TSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIW 475 (660)
T ss_pred chhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHH
Confidence 98877632111 1 112358888988988886
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.2e-16 Score=128.04 Aligned_cols=139 Identities=21% Similarity=0.147 Sum_probs=97.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+|+||||+||||+++++.|+++|++|++++|++...... ...++.++.+|+++++++.++++..
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---------- 74 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF---------- 74 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc----------
Confidence 6899999999999999999999999999999876543211 0123445555666555555554432
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCC-ccEEE
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYN-VSVVS 148 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~-~~~~i 148 (189)
++|++||+++..... ...++|+.++.++++++++.+ .+++|
T Consensus 75 -------------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv 123 (349)
T TIGR02622 75 -------------------------------KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVV 123 (349)
T ss_pred -------------------------------CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEE
Confidence 247777777643211 123578999999999998876 78999
Q ss_pred EeccceeecCCC--------CCCCCCccchhhHHHHHHHhh
Q psy3626 149 VCLSAFLFYEPS--------KVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 149 ~iSS~~~~~~~~--------~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++||..+++... ....+..+|..+|...|.+++
T Consensus 124 ~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~ 164 (349)
T TIGR02622 124 NVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIA 164 (349)
T ss_pred EEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHH
Confidence 999987765321 011345678888888887775
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=128.31 Aligned_cols=140 Identities=15% Similarity=0.120 Sum_probs=95.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-----cc------CCceeEEeccccChhHHHHhhhcCcce
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-----EY------HSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-----~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
+|+++||||+||+|++++++|+++|++|++++|+++.... +. ..++.++.+|+++.++++++++..
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 82 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI--- 82 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc---
Confidence 4789999999999999999999999999999987643211 00 122444455555544444444322
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHC
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~ 142 (189)
++|++||+++..... ...++|+.++.+++++|++.
T Consensus 83 --------------------------------------~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 124 (340)
T PLN02653 83 --------------------------------------KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH 124 (340)
T ss_pred --------------------------------------CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh
Confidence 357888887753321 11257888999999999988
Q ss_pred Ccc-----EEEEeccceeecCCCC------CCCCCccchhhHHHHHHHhh
Q psy3626 143 NVS-----VVSVCLSAFLFYEPSK------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~-----~~i~iSS~~~~~~~~~------~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ +||++||...++.... ...+...|..+|...|.+++
T Consensus 125 ~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~ 174 (340)
T PLN02653 125 GQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTV 174 (340)
T ss_pred ccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 765 8999999877764321 11234568888888888775
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-16 Score=127.34 Aligned_cols=138 Identities=18% Similarity=0.189 Sum_probs=94.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+||||+||+|++++++|+++|++|++++|........ .+.+..++.+|+++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d------------------- 61 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN------------------- 61 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCC-------------------
Confidence 5899999999999999999999999999987653322110 01123344444444
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCcc
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVS 145 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~ 145 (189)
.+.+.+.+. ++|++||+++..... ....+|+.++.+++++|++.+++
T Consensus 62 ------------------------~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 117 (338)
T PRK10675 62 ------------------------EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117 (338)
T ss_pred ------------------------HHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 444444443 467777777654321 11346888999999999999999
Q ss_pred EEEEeccceeecCCCC------CC--CCCccchhhHHHHHHHhhh
Q psy3626 146 VVSVCLSAFLFYEPSK------VP--PMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~------~p--~~~~~~~~~~~~~~~~l~~ 182 (189)
+||++||+.+++.... .| .+..+|...|...|+++++
T Consensus 118 ~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~ 162 (338)
T PRK10675 118 NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTD 162 (338)
T ss_pred EEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHH
Confidence 9999999877653221 11 2356677788888888763
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=137.84 Aligned_cols=147 Identities=15% Similarity=0.097 Sum_probs=99.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCC--CCCcc----cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQ--RLPSE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~--~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
+|+|+|||||||||++++++|+++ +++|++++|... ....+ ...+++++.+|+++++.+...+.
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------- 77 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLI-------- 77 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHh--------
Confidence 479999999999999999999998 688998887531 11111 01234455555555444333221
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-------CcceehhhHHHHHHHHHHCC-c
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-------PTTVMSEGMKNIVTAMKEYN-V 144 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~-~ 144 (189)
..++|+|||+++...... ..++|+.++.+++++|++.+ +
T Consensus 78 ---------------------------------~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~v 124 (668)
T PLN02260 78 ---------------------------------TEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124 (668)
T ss_pred ---------------------------------hcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 135788888887654321 23578999999999999987 8
Q ss_pred cEEEEeccceeecCCCCC----------CCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 145 SVVSVCLSAFLFYEPSKV----------PPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~----------p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
++||++||..+|+..... ..+..+|..+|...|++++. .+++++
T Consensus 125 kr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~v 182 (668)
T PLN02260 125 RRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182 (668)
T ss_pred cEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEE
Confidence 999999999877643211 12345688889999988863 356654
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.8e-16 Score=124.75 Aligned_cols=139 Identities=19% Similarity=0.296 Sum_probs=97.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|.+++||||+||+|++++++|++++ .++++.+..+...... ...+++++.+|+.+...+.+++++
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~------- 76 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQG------- 76 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccC-------
Confidence 4589999999999999999999997 7899998887532211 123445555555555555555544
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccC-------CCCCCcceehhhHHHHHHHHHHCCcc
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTR-------NDLSPTTVMSEGMKNIVTAMKEYNVS 145 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~-------~~~~~~~~~~~~~~~ll~~~~~~~~~ 145 (189)
+ .++|+++.. ......++|++||++++++|.+.|++
T Consensus 77 ------------------------------------~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~ 119 (361)
T KOG1430|consen 77 ------------------------------------A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK 119 (361)
T ss_pred ------------------------------------c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCC
Confidence 4 333333321 12234679999999999999999999
Q ss_pred EEEEeccceeecCCC-------CCCCCC---ccchhhHHHHHHHhhhc
Q psy3626 146 VVSVCLSAFLFYEPS-------KVPPMF---HNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~-------~~p~~~---~~~~~~~~~~~~~l~~~ 183 (189)
++|++||..+..+.. ..|.+. .+|..+|..+|++..+.
T Consensus 120 ~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~a 167 (361)
T KOG1430|consen 120 RLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEA 167 (361)
T ss_pred EEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHh
Confidence 999999998864321 122222 46788899999988855
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.5e-16 Score=129.10 Aligned_cols=146 Identities=18% Similarity=0.233 Sum_probs=97.2
Q ss_pred CceEEEE----cCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 1 MKKIAIF----GATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 1 m~~i~It----GatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
||+|+|| |||||+|++++++|+++||+|++++|++.......... ...+.. +.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~----------~~~~~~-l~------------ 108 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEP----------FSRFSE-LS------------ 108 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCc----------hhhhhH-hh------------
Confidence 4689999 99999999999999999999999999865432110000 000000 00
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
...+..+.+|+.+...+. ...++|+||++.+. ...++++++++|++.|+++||++||..++
T Consensus 109 ---------~~~v~~v~~D~~d~~~~~-~~~~~d~Vi~~~~~---------~~~~~~~ll~aa~~~gvkr~V~~SS~~vy 169 (378)
T PLN00016 109 ---------SAGVKTVWGDPADVKSKV-AGAGFDVVYDNNGK---------DLDEVEPVADWAKSPGLKQFLFCSSAGVY 169 (378)
T ss_pred ---------hcCceEEEecHHHHHhhh-ccCCccEEEeCCCC---------CHHHHHHHHHHHHHcCCCEEEEEccHhhc
Confidence 012445555554422222 22468999988653 35678999999999999999999999887
Q ss_pred cCCCCCCC----CCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 157 YEPSKVPP----MFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 157 ~~~~~~p~----~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
......|. +..+.. .|...|+++++.+++|++
T Consensus 170 g~~~~~p~~E~~~~~p~~-sK~~~E~~l~~~~l~~~i 205 (378)
T PLN00016 170 KKSDEPPHVEGDAVKPKA-GHLEVEAYLQKLGVNWTS 205 (378)
T ss_pred CCCCCCCCCCCCcCCCcc-hHHHHHHHHHHcCCCeEE
Confidence 64322221 111222 688899999988998874
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-16 Score=120.96 Aligned_cols=140 Identities=22% Similarity=0.241 Sum_probs=106.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc------cc--CCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS------EY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~------~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
++|+||||.||||++.+-+|+++|+.|++++.-.... .. +. ...+.++.+|+.|.+.+++.++..
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~------ 76 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV------ 76 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc------
Confidence 5899999999999999999999999999997532221 11 11 255777777777777777776654
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCcc
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVS 145 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~ 145 (189)
..|.|+|.++.... ...+.+|.-|+.++++.|++.+++
T Consensus 77 -----------------------------------~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~ 121 (343)
T KOG1371|consen 77 -----------------------------------KFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVK 121 (343)
T ss_pred -----------------------------------CCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCc
Confidence 25677777664331 234568999999999999999999
Q ss_pred EEEEeccceeecCCCCCC--------CCCccchhhHHHHHHHhhh
Q psy3626 146 VVSVCLSAFLFYEPSKVP--------PMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p--------~~~~~~~~~~~~~~~~l~~ 182 (189)
.+|+.||+.+|+.+...| .+.++|+.+|..+|+...+
T Consensus 122 ~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d 166 (343)
T KOG1371|consen 122 ALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHD 166 (343)
T ss_pred eEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHh
Confidence 999999999988754333 3678899999999998874
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.4e-16 Score=123.66 Aligned_cols=152 Identities=15% Similarity=0.159 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+||||++++++|+++|++|+++.|++....... ......
T Consensus 6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~------------------~~~~~~--------------- 52 (325)
T PLN02989 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTD------------------HLLALD--------------- 52 (325)
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHH------------------HHHhcc---------------
Confidence 68999999999999999999999999999988765432110 000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHC-CccEEEEeccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEY-NVSVVSVCLSA 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~-~~~~~i~iSS~ 153 (189)
+...++..+.+|+.+.+.+.+.++++|++||++|..... ...++|+.++.++++++.+. +.++||++||.
T Consensus 53 --~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~ 130 (325)
T PLN02989 53 --GAKERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSM 130 (325)
T ss_pred --CCCCceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecch
Confidence 001244555566666666666666677788887753211 11246899999999999885 57899999998
Q ss_pred eeecCCC-----C------CC-C------CCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPS-----K------VP-P------MFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~-----~------~p-~------~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.++++.. . .| . ...+|..+|...|+++. +.+++++
T Consensus 131 ~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 187 (325)
T PLN02989 131 AAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLI 187 (325)
T ss_pred hheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEE
Confidence 7654321 0 00 0 12457788888887775 3366554
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-16 Score=129.90 Aligned_cols=138 Identities=12% Similarity=0.161 Sum_probs=90.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----------CCceeEEeccccChhHHHHhhhcCcce
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----------HSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
||+|+||||+||||++++++|+++|++|+++.|+.+....+. ..++.++.+|+++++++.+
T Consensus 53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-------- 124 (367)
T PLN02686 53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE-------- 124 (367)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH--------
Confidence 578999999999999999999999999999888754322110 0123444455555544444
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHC
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~ 142 (189)
++.++|.++|+++.... ....++|+.++.+++++|++.
T Consensus 125 -----------------------------------~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~ 169 (367)
T PLN02686 125 -----------------------------------AFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT 169 (367)
T ss_pred -----------------------------------HHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence 44445555555443211 123457899999999999986
Q ss_pred -CccEEEEeccce--eecC--CCCCC---------------CCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAF--LFYE--PSKVP---------------PMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~--~~~~--~~~~p---------------~~~~~~~~~~~~~~~~l~ 181 (189)
++++||++||.. +++. ....| .+..+|..+|...|+++.
T Consensus 170 ~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~ 228 (367)
T PLN02686 170 ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAW 228 (367)
T ss_pred CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHH
Confidence 799999999963 3321 00101 122357778888888775
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.1e-16 Score=123.06 Aligned_cols=130 Identities=13% Similarity=0.108 Sum_probs=94.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
+|+||||||++|++++++|+++|++|++++|++++... .+++.+.+|+.|++++..+++..+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~d~~d~~~l~~a~~~~~--------------- 62 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---PNEKHVKFDWLDEDTWDNPFSSDD--------------- 62 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---CCCccccccCCCHHHHHHHHhccc---------------
Confidence 58999999999999999999999999999999875532 455666777777777776664321
Q ss_pred ccccCceeEEeccccCHHHHHHHhcC-CCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCC
Q psy3626 83 SEYHSKVEIIQGDVLKLADVKKAIEG-KDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSK 161 (189)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~ 161 (189)
.+.+ +|.++++.+.... ....+++++++|++.|++|||++||......
T Consensus 63 ----------------------~~~g~~d~v~~~~~~~~~------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~--- 111 (285)
T TIGR03649 63 ----------------------GMEPEISAVYLVAPPIPD------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG--- 111 (285)
T ss_pred ----------------------CcCCceeEEEEeCCCCCC------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC---
Confidence 1134 6777777653221 2456789999999999999999998654321
Q ss_pred CCCCCccchhhHHHHHHHhhhc-CCCCCC
Q psy3626 162 VPPMFHNVNDDHQRMYNVLKDS-GLNYIA 189 (189)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~l~~~-~~~~t~ 189 (189)
. ..+...+++++++ +++||+
T Consensus 112 ~--------~~~~~~~~~l~~~~gi~~ti 132 (285)
T TIGR03649 112 G--------PAMGQVHAHLDSLGGVEYTV 132 (285)
T ss_pred C--------chHHHHHHHHHhccCCCEEE
Confidence 1 1233456777775 888874
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-16 Score=124.91 Aligned_cols=141 Identities=12% Similarity=0.052 Sum_probs=103.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++++||||+|++|++++++|.++|++|++++|+++.+..+...++.++.+|++++++++++++...
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~-------------- 70 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVL-------------- 70 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHH--------------
Confidence 579999999999999999999999999999999776655444567788999999888877775430
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
....++.|++|+++|....... .++|+.+ ++++++.+++.+.++
T Consensus 71 ---------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~ 129 (277)
T PRK05993 71 ---------------------ELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGR 129 (277)
T ss_pred ---------------------HHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCE
Confidence 1112357888888875443211 2366666 677888888888889
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..++... +....|..+|...+.+.+
T Consensus 130 iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 160 (277)
T PRK05993 130 IVQCSSILGLVPM----KYRGAYNASKFAIEGLSL 160 (277)
T ss_pred EEEECChhhcCCC----CccchHHHHHHHHHHHHH
Confidence 9999998765421 223457777877776654
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.5e-16 Score=122.67 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=97.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
+|+|+||+||+|++++++|+++|++|+++.|. .+|+.+++++.+++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~---------------- 49 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAI---------------- 49 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhC----------------
Confidence 58999999999999999999999999999885 35777777777777654
Q ss_pred ccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 83 SEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
++|+|||+++..... ...++|+.++.++++++++.+. ++|++||..+
T Consensus 50 -------------------------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~v 103 (287)
T TIGR01214 50 -------------------------RPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYV 103 (287)
T ss_pred -------------------------CCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeee
Confidence 136666666543221 1134688899999999998874 8999999887
Q ss_pred ecCCCC-------CCCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 156 FYEPSK-------VPPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 156 ~~~~~~-------~p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
|..... .+.+...|...|...|+.++..+.+++
T Consensus 104 y~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~ 143 (287)
T TIGR01214 104 FDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAGPNAL 143 (287)
T ss_pred ecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeE
Confidence 754211 123455678889999999987777765
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.9e-16 Score=124.67 Aligned_cols=147 Identities=14% Similarity=0.119 Sum_probs=95.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++|+||||+||+|++++++|+++|++|++++|........ ...+......
T Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~--------------~~~~~~~~~~---------------- 55 (352)
T PLN02240 6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEA--------------LRRVKELAGD---------------- 55 (352)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHH--------------HHHHHHhhcc----------------
Confidence 5899999999999999999999999999998754322100 0000000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
...+++.+.+|+.+++++...+. ++|+|||+++..... ...+.|+.++.+++++|++.+++++|++||
T Consensus 56 ---~~~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 132 (352)
T PLN02240 56 ---LGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSS 132 (352)
T ss_pred ---cCccceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 01123444455555554444443 467888887753211 113578899999999999998899999999
Q ss_pred ceeecCCCC-------CCCCCccchhhHHHHHHHhh
Q psy3626 153 AFLFYEPSK-------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 153 ~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++.... ...+...|..+|...|++++
T Consensus 133 ~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 168 (352)
T PLN02240 133 ATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICR 168 (352)
T ss_pred HHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 876643211 11234567888899988876
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-16 Score=124.31 Aligned_cols=156 Identities=19% Similarity=0.242 Sum_probs=92.9
Q ss_pred EEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCCc
Q psy3626 6 IFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLPS 83 (189)
Q Consensus 6 ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (189)
|||||||+|++++++|++++. +|+++.|..+..... +.+.+.+..... +..
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~---------------~rl~~~l~~~~~------------~~~ 53 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSAL---------------ERLKDALKEYGL------------WDD 53 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHH---------------HHHHGGG-SS-H------------HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccch---------------hhhhhhcccccc------------hhh
Confidence 799999999999999999865 899999976432210 111111111100 000
Q ss_pred ---cccCceeEEeccccCH------HHHHHHhcCCCEEEEeeccCCCCCC----cceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 84 ---EYHSKVEIIQGDVLKL------ADVKKAIEGKDGVVVALGTRNDLSP----TTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 84 ---~~~~~~~~~~~~~~~~------~~~~~~~~~~d~vv~~~~~~~~~~~----~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
...++++++.||+.++ ++.....+.+|+|||+++......+ .+.|+.|++++++.|.+.+.++|+|+
T Consensus 54 ~~~~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~i 133 (249)
T PF07993_consen 54 LDKEALSRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYI 133 (249)
T ss_dssp H-HHHTTTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEE
T ss_pred hhhhhhccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEe
Confidence 0145788888888764 5667777899999999998776644 35899999999999997776799999
Q ss_pred ccceeecCCCC----------------CCCCCccchhhHHHHHHHhhhc----CCCCC
Q psy3626 151 LSAFLFYEPSK----------------VPPMFHNVNDDHQRMYNVLKDS----GLNYI 188 (189)
Q Consensus 151 SS~~~~~~~~~----------------~p~~~~~~~~~~~~~~~~l~~~----~~~~t 188 (189)
||+........ .+...+.|..+|+.+|+++++. +++++
T Consensus 134 STa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~ 191 (249)
T PF07993_consen 134 STAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVT 191 (249)
T ss_dssp EEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EE
T ss_pred ccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEE
Confidence 99544332221 1133467888999999999832 66654
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=117.17 Aligned_cols=137 Identities=25% Similarity=0.254 Sum_probs=95.3
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC--CcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL--PSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||.+|+.+++.|++.+++|+++.|++++. ..+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~------------------------------------- 43 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL------------------------------------- 43 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT-------------------------------------
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc-------------------------------------
Confidence 79999999999999999999999999999987321 111112
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSK 161 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~ 161 (189)
.+.++.+|+.+++.+.++++++|.++.+.+... ........+++++++++|+++||+ ||.........
T Consensus 44 ------g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-----~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~~~~ 111 (233)
T PF05368_consen 44 ------GAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-----PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYDESS 111 (233)
T ss_dssp ------TTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-----CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTTTTT
T ss_pred ------cceEeecccCCHHHHHHHHcCCceEEeecCcch-----hhhhhhhhhHHHhhhccccceEEE-EEecccccccc
Confidence 234455566666666666666777777766543 125777899999999999999996 55443332222
Q ss_pred CCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 162 VPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
...+..+....|..+++++++++++||+
T Consensus 112 ~~~p~~~~~~~k~~ie~~l~~~~i~~t~ 139 (233)
T PF05368_consen 112 GSEPEIPHFDQKAEIEEYLRESGIPYTI 139 (233)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHCTSEBEE
T ss_pred cccccchhhhhhhhhhhhhhhcccccee
Confidence 2222344566788999999999999984
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.9e-16 Score=121.92 Aligned_cols=140 Identities=20% Similarity=0.128 Sum_probs=101.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|+++.|+++....+ ...++.++.+|++++++++++++..
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 70 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRA------------ 70 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHH------------
Confidence 6799999999999999999999999999999987554432 1246778888888888877766432
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~ 143 (189)
.+.++++|++|+++|....... .++|+.++.++++++ ++.+
T Consensus 71 ------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 126 (276)
T PRK06482 71 ------------------------FAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG 126 (276)
T ss_pred ------------------------HHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 2334567888888886543211 236888888888876 6667
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|...+.+++
T Consensus 127 ~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 160 (276)
T PRK06482 127 GGRIVQVSSEGGQIAY----PGFSLYHATKWGIEGFVE 160 (276)
T ss_pred CCEEEEEcCcccccCC----CCCchhHHHHHHHHHHHH
Confidence 7899999997654321 234567778877775554
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.8e-16 Score=125.40 Aligned_cols=142 Identities=17% Similarity=0.155 Sum_probs=90.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|+++....... .+..
T Consensus 11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~------------------~~~~---------------- 56 (353)
T PLN02896 11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLS------------------KWKE---------------- 56 (353)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH------------------hhcc----------------
Confidence 689999999999999999999999999999887543221100 0000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------CC---c-----ceehhhHHHHHHHHHHCC-ccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------SP---T-----TVMSEGMKNIVTAMKEYN-VSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~~---~-----~~~~~~~~~ll~~~~~~~-~~~ 146 (189)
..++..+.+|+.+.+.+.+++.++|+|||+++..... .+ . +.|+.++.+++++|++.+ +++
T Consensus 57 ----~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~ 132 (353)
T PLN02896 57 ----GDRLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKR 132 (353)
T ss_pred ----CCeEEEEECCCCCHHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccE
Confidence 0133444445555555555555566666666643211 01 1 123588999999998874 789
Q ss_pred EEEeccceeecCCCC-------------CC--------CCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSK-------------VP--------PMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~-------------~p--------~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..+++..+. .| .+..+|..+|...|+++.
T Consensus 133 ~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~ 188 (353)
T PLN02896 133 VVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAF 188 (353)
T ss_pred EEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHH
Confidence 999999887753210 00 011267788888888765
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-15 Score=118.73 Aligned_cols=138 Identities=18% Similarity=0.148 Sum_probs=100.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++++||||+|+||++++++|+++|++|++++|+++..... .+++++.+|++++++++++++.+
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~--------------- 67 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEV--------------- 67 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHH---------------
Confidence 4799999999999999999999999999999987665432 46788999999999988888653
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----HHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA----MKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~----~~~~~~~~ 146 (189)
.+.+++.|++|+++|....... .++|..++.+++++ +++.+.++
T Consensus 68 ---------------------~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~ 126 (270)
T PRK06179 68 ---------------------IARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGR 126 (270)
T ss_pred ---------------------HHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCce
Confidence 3445678889999886432211 23566665555554 67778889
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..++...+ ....|..+|...+.+++
T Consensus 127 iv~isS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 157 (270)
T PRK06179 127 IINISSVLGFLPAP----YMALYAASKHAVEGYSE 157 (270)
T ss_pred EEEECCccccCCCC----CccHHHHHHHHHHHHHH
Confidence 99999987754322 23346667776665543
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-15 Score=121.61 Aligned_cols=112 Identities=16% Similarity=0.267 Sum_probs=77.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC------cc--cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP------SE--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~------~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+||||++++++|+++|++|+++.|+.+... .+ ...+++++.+|+++++++
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~-------------- 72 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSI-------------- 72 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHH--------------
Confidence 68999999999999999999999999999998643211 00 012344455555555444
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHC-CccEE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEY-NVSVV 147 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~-~~~~~ 147 (189)
.+.+.++|.+++.++..... ...++|+.++.++++++.+. ++++|
T Consensus 73 -----------------------------~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~ri 123 (297)
T PLN02583 73 -----------------------------LDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKV 123 (297)
T ss_pred -----------------------------HHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEE
Confidence 44445555555554432211 12457899999999999886 68999
Q ss_pred EEeccceee
Q psy3626 148 SVCLSAFLF 156 (189)
Q Consensus 148 i~iSS~~~~ 156 (189)
|++||..++
T Consensus 124 V~~SS~~a~ 132 (297)
T PLN02583 124 VFTSSLTAV 132 (297)
T ss_pred EEecchHhe
Confidence 999998654
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-15 Score=115.64 Aligned_cols=149 Identities=15% Similarity=0.134 Sum_probs=101.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||.||||+.+++.++++. .+|+.+++=. +.+ +.+.++....
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLT-------------YAg---n~~~l~~~~~--------------- 49 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLT-------------YAG---NLENLADVED--------------- 49 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEeccc-------------ccC---CHHHHHhhhc---------------
Confidence 689999999999999999999873 4567766421 001 1112221111
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCc-cEEEE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNV-SVVSV 149 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~-~~~i~ 149 (189)
.++.+++++|+.|.+.+.+.+. ..|+|+|.|+.++.. .+.+.|+.||.++|+++++... .||+|
T Consensus 50 ------~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~H 123 (340)
T COG1088 50 ------SPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHH 123 (340)
T ss_pred ------CCCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEE
Confidence 1266677777777777777776 479999999876633 4457999999999999999875 49999
Q ss_pred eccceeecCCCCC--------C-CCCccchhhHHHHHHHhh----hcCCCC
Q psy3626 150 CLSAFLFYEPSKV--------P-PMFHNVNDDHQRMYNVLK----DSGLNY 187 (189)
Q Consensus 150 iSS~~~~~~~~~~--------p-~~~~~~~~~~~~~~~~l~----~~~~~~ 187 (189)
+|+..+|++.... | .+-.||..+|+++..+++ ..+++.
T Consensus 124 ISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp~ 174 (340)
T COG1088 124 ISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLPA 174 (340)
T ss_pred eccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCce
Confidence 9999999874321 1 233556666666654444 335554
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.1e-16 Score=128.45 Aligned_cols=143 Identities=13% Similarity=0.159 Sum_probs=94.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+||||+||||++|+++|+++|++|++++|.......... ....
T Consensus 121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~-----------------~~~~----------------- 166 (436)
T PLN02166 121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV-----------------HLFG----------------- 166 (436)
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhh-----------------hhcc-----------------
Confidence 689999999999999999999999999999886322111000 0000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
..++.++.+|+.+. .+.++|+|||+++..... ...+.|+.++.+++++|++.+. ++|++||+.
T Consensus 167 ----~~~~~~~~~Di~~~-----~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~ 236 (436)
T PLN02166 167 ----NPRFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSE 236 (436)
T ss_pred ----CCceEEEECccccc-----cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHH
Confidence 01233444444332 234678888888754321 1134899999999999999885 899999998
Q ss_pred eecCCCCC-----------C-CCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 155 LFYEPSKV-----------P-PMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 155 ~~~~~~~~-----------p-~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+|++.... | .+...|..+|...|+.+++ .+++++
T Consensus 237 VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ 286 (436)
T PLN02166 237 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVR 286 (436)
T ss_pred HhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeE
Confidence 87653211 1 1234577788888887763 355553
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.4e-16 Score=120.23 Aligned_cols=139 Identities=15% Similarity=0.008 Sum_probs=99.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+++++||||+|++|++++++|+++|++|++++|+++.+.+....++.++.+|++++++++++++..
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~-------------- 68 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTI-------------- 68 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHH--------------
Confidence 368999999999999999999999999999999876655443345778889999988887776532
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCCcc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYNVS 145 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~~~ 145 (189)
.+..+++|++|+++|.....+. .++|..+ ++.+++.+++.+.+
T Consensus 69 ----------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g 126 (273)
T PRK06182 69 ----------------------IAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSG 126 (273)
T ss_pred ----------------------HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCC
Confidence 2334567888888876533211 2355555 67777888888778
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
++|++||..+....+ ....|...|...+.+
T Consensus 127 ~iv~isS~~~~~~~~----~~~~Y~~sKaa~~~~ 156 (273)
T PRK06182 127 RIINISSMGGKIYTP----LGAWYHATKFALEGF 156 (273)
T ss_pred EEEEEcchhhcCCCC----CccHhHHHHHHHHHH
Confidence 999999976543211 122355666666554
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=119.99 Aligned_cols=140 Identities=15% Similarity=0.053 Sum_probs=100.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||++++++|+++|++|++++|+++....+ ...++..+.+|+++++++.++++++
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~------------ 72 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADA------------ 72 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHH------------
Confidence 5899999999999999999999999999999987654432 1235777888998888887776543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----HHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA----MKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~----~~~~~ 143 (189)
.+.++++|++||++|.....+. .++|+.++.+++++ +++.+
T Consensus 73 ------------------------~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 128 (277)
T PRK06180 73 ------------------------EATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR 128 (277)
T ss_pred ------------------------HHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 3344568999999886542211 34777787777776 44556
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|...|...+.+.+
T Consensus 129 ~~~iv~iSS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 162 (277)
T PRK06180 129 RGHIVNITSMGGLITM----PGIGYYCGSKFALEGISE 162 (277)
T ss_pred CCEEEEEecccccCCC----CCcchhHHHHHHHHHHHH
Confidence 6799999998766432 233456777766665444
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-15 Score=122.35 Aligned_cols=134 Identities=18% Similarity=0.135 Sum_probs=90.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+||||++++++|+++| ++|++++|++.....+. ..+.
T Consensus 5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~------------------~~~~--------------- 51 (324)
T TIGR03589 5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQ------------------QKFP--------------- 51 (324)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHH------------------HHhC---------------
Confidence 689999999999999999999986 78999988754321110 0000
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
..++..+.+|+.|.+.+.+.++++|++||++|..... ...++|+.++.++++++++.++++||++||
T Consensus 52 ------~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS 125 (324)
T TIGR03589 52 ------APCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALST 125 (324)
T ss_pred ------CCcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 0133444455555555555555566677766643211 123578999999999999999899999999
Q ss_pred ceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 153 AFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 153 ~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.... .+..+|..+|...|.+++
T Consensus 126 ~~~~-------~p~~~Y~~sK~~~E~l~~ 147 (324)
T TIGR03589 126 DKAA-------NPINLYGATKLASDKLFV 147 (324)
T ss_pred CCCC-------CCCCHHHHHHHHHHHHHH
Confidence 6432 123458888888887764
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=134.54 Aligned_cols=121 Identities=26% Similarity=0.359 Sum_probs=89.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||+|++++++|+++|++|++++|+..... ..++.++.+|+.+++++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~---~~~v~~v~gDL~D~~~l---------------------- 55 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW---PSSADFIAADIRDATAV---------------------- 55 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc---ccCceEEEeeCCCHHHH----------------------
Confidence 58999999999999999999999999999998743211 12345555555555554
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSK 161 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~ 161 (189)
.+.++++|++||+++.... ..++|+.++.+++++|++.++++||++||..
T Consensus 56 ---------------------~~al~~vD~VVHlAa~~~~--~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------- 105 (854)
T PRK05865 56 ---------------------ESAMTGADVVAHCAWVRGR--NDHINIDGTANVLKAMAETGTGRIVFTSSGH------- 105 (854)
T ss_pred ---------------------HHHHhCCCEEEECCCcccc--hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------
Confidence 4444556777777765332 3567899999999999999999999999863
Q ss_pred CCCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 162 VPPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
|.+.|+++++.+++|+
T Consensus 106 -----------K~aaE~ll~~~gl~~v 121 (854)
T PRK05865 106 -----------QPRVEQMLADCGLEWV 121 (854)
T ss_pred -----------HHHHHHHHHHcCCCEE
Confidence 4566666666666665
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.4e-16 Score=133.71 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=101.6
Q ss_pred ceEEEEcCCChhhHHHHHHHH--HcCCcEEEEecCCCCCC--cc----cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAAL--KQGLEVCTLLRDPQRLP--SE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~--~~g~~v~~~~r~~~~~~--~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+|+|||||||||++++++|+ ++|++|++++|++.... .+ ...+++++.+|+++++.-
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~-------------- 66 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLG-------------- 66 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCC--------------
Confidence 589999999999999999999 47999999999643211 00 002344444444442100
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----CcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----PTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.+.+.+.+. .++|+|||+++...... ..++|+.++.+++++|++.++++||+
T Consensus 67 -----------------------~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~ 122 (657)
T PRK07201 67 -----------------------LSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHH 122 (657)
T ss_pred -----------------------cCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEE
Confidence 002233333 67888999888644321 24579999999999999998999999
Q ss_pred eccceeecCCCC---------CCCCCccchhhHHHHHHHhh-hcCCCCCC
Q psy3626 150 CLSAFLFYEPSK---------VPPMFHNVNDDHQRMYNVLK-DSGLNYIA 189 (189)
Q Consensus 150 iSS~~~~~~~~~---------~p~~~~~~~~~~~~~~~~l~-~~~~~~t~ 189 (189)
+||..+++.... .+....+|..+|...|+.++ ..+++|++
T Consensus 123 ~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~i 172 (657)
T PRK07201 123 VSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVREECGLPWRV 172 (657)
T ss_pred EeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHHcCCCcEEE
Confidence 999887653211 01223568889999999988 45777763
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=116.91 Aligned_cols=121 Identities=17% Similarity=0.078 Sum_probs=93.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|++++|||||++||..++++|.++|++|+++.|+.+++..+. +..+.++++|+++++++.+..+..
T Consensus 6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l------- 78 (265)
T COG0300 6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL------- 78 (265)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH-------
Confidence 468999999999999999999999999999999998776542 234678888888887776655321
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~ 138 (189)
......+|++|+++|.....+.. ++|+.+ ++.+++-
T Consensus 79 -----------------------------~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~ 129 (265)
T COG0300 79 -----------------------------KERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPG 129 (265)
T ss_pred -----------------------------HhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233589999999977655322 255544 6677888
Q ss_pred HHHCCccEEEEeccceeec
Q psy3626 139 MKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~ 157 (189)
+.+.+.+++|.++|.+++.
T Consensus 130 m~~~~~G~IiNI~S~ag~~ 148 (265)
T COG0300 130 MVERGAGHIINIGSAAGLI 148 (265)
T ss_pred HHhcCCceEEEEechhhcC
Confidence 8888888999999999865
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-16 Score=124.78 Aligned_cols=124 Identities=20% Similarity=0.199 Sum_probs=91.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+|+|++|++|+++.+.|.++|++++.+.|. ..|+.+.+++.+.++..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~--------------- 50 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAF--------------- 50 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH---------------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHh---------------
Confidence 699999999999999999999999999999776 45777777777777654
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+||++++..... ....+|+.++.++.+.|.+.+. ++||+||..
T Consensus 51 --------------------------~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~ 103 (286)
T PF04321_consen 51 --------------------------KPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDY 103 (286)
T ss_dssp ----------------------------SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGG
T ss_pred --------------------------CCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccE
Confidence 357788887765422 2356899999999999999985 999999998
Q ss_pred eecCC-------CCCCCCCccchhhHHHHHHHhhh
Q psy3626 155 LFYEP-------SKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 155 ~~~~~-------~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
+|.+. ...|.+.+.|...|.+.|+.+++
T Consensus 104 VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~ 138 (286)
T PF04321_consen 104 VFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRA 138 (286)
T ss_dssp GS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHH
T ss_pred EEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 87543 23456678889999999999885
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-15 Score=126.03 Aligned_cols=136 Identities=11% Similarity=0.134 Sum_probs=90.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+||||+||||++|+++|+++|++|++++|......... ...+.
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~-----------------~~~~~----------------- 165 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV-----------------MHHFS----------------- 165 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------------hhhcc-----------------
Confidence 68999999999999999999999999999987533211100 00000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
..++.++.+|+.+. .+.++|+|||+++...+. ...+.|+.++.+++++|++.+. +||++||+.
T Consensus 166 ----~~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~ 235 (442)
T PLN02206 166 ----NPNFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 235 (442)
T ss_pred ----CCceEEEECCccCh-----hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChH
Confidence 11334444554332 234578888888754321 1234899999999999999985 899999998
Q ss_pred eecCCCCC-----------C-CCCccchhhHHHHHHHhh
Q psy3626 155 LFYEPSKV-----------P-PMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 155 ~~~~~~~~-----------p-~~~~~~~~~~~~~~~~l~ 181 (189)
+|++.... | .....|...|...|+.+.
T Consensus 236 VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~ 274 (442)
T PLN02206 236 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTM 274 (442)
T ss_pred HhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHH
Confidence 87642211 1 112447778888888775
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4e-15 Score=120.67 Aligned_cols=139 Identities=12% Similarity=0.108 Sum_probs=90.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCCC--CCCcc----cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDPQ--RLPSE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~--~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+||||+||||++++++|+++|++ |+++.+... ..... ...++.++.+|++++++++++++..
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-------- 72 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-------- 72 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc--------
Confidence 48999999999999999999999876 544444321 11110 0123445556666665555555421
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHC-----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEY----- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~----- 142 (189)
++|+|||+++.... ....++|+.++.+++++|++.
T Consensus 73 ---------------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~ 119 (352)
T PRK10084 73 ---------------------------------QPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALD 119 (352)
T ss_pred ---------------------------------CCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccc
Confidence 35777777764321 123568999999999999874
Q ss_pred ----CccEEEEeccceeecCCC-----------------CCCCCCccchhhHHHHHHHhh
Q psy3626 143 ----NVSVVSVCLSAFLFYEPS-----------------KVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ----~~~~~i~iSS~~~~~~~~-----------------~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++++|++||...+.... ....+...|..+|...|.+++
T Consensus 120 ~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 179 (352)
T PRK10084 120 EDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVR 179 (352)
T ss_pred cccccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHH
Confidence 467999999987765311 011344667888888887775
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.3e-15 Score=118.56 Aligned_cols=160 Identities=15% Similarity=0.118 Sum_probs=118.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+++++||||||+|+++++.|+.+ ..+|+|++|-.+.- ...+++-+.++. ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E------------------~a~~RL~~~~~~---------~~~ 53 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDE------------------AALARLEKTFDL---------YRH 53 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHH------------------HHHHHHHHHhhh---------hhh
Confidence 57999999999999999999987 45999999975422 222222222220 123
Q ss_pred CCccccCceeEEeccccCH------HHHHHHhcCCCEEEEeeccCCCCCCc----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 81 LPSEYHSKVEIIQGDVLKL------ADVKKAIEGKDGVVVALGTRNDLSPT----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~vv~~~~~~~~~~~~----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
|.+.|.++++++.||+..+ .+.....+.+|.|||+++..+...++ ..|+.|+..+++.|...+.|.++|+
T Consensus 54 ~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yV 133 (382)
T COG3320 54 WDELSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYV 133 (382)
T ss_pred hhhhhcceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEE
Confidence 4556777899999988744 67888888999999999987755443 4899999999999999988999999
Q ss_pred ccceeecCCC----------------CCCCCCccchhhHHHHHHHhhh---cCCCCC
Q psy3626 151 LSAFLFYEPS----------------KVPPMFHNVNDDHQRMYNVLKD---SGLNYI 188 (189)
Q Consensus 151 SS~~~~~~~~----------------~~p~~~~~~~~~~~~~~~~l~~---~~~~~t 188 (189)
||.++..... ........|..+|+.+|..+++ .|++.+
T Consensus 134 Ssisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~ 190 (382)
T COG3320 134 SSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVT 190 (382)
T ss_pred eeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeE
Confidence 9987754211 1112347789999999999984 356654
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.2e-15 Score=116.31 Aligned_cols=125 Identities=21% Similarity=0.175 Sum_probs=103.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|| |+|||++|.+|..|.+.|. .+++|+.++|.. .|+++++.+.+.++..
T Consensus 1 M~-iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~-------------- 49 (281)
T COG1091 1 MK-ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRET-------------- 49 (281)
T ss_pred Cc-EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhh--------------
Confidence 55 9999999999999999998 778999998864 6888888888887765
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-------cceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-------TTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-------~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++|+|||+++....+.+ +.+|..+..++.++|.+.|. ++||+||.
T Consensus 50 ---------------------------~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTD 101 (281)
T COG1091 50 ---------------------------RPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTD 101 (281)
T ss_pred ---------------------------CCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecc
Confidence 45889999887654432 44999999999999999995 99999999
Q ss_pred eeecCCC-------CCCCCCccchhhHHHHHHHhhhcC
Q psy3626 154 FLFYEPS-------KVPPMFHNVNDDHQRMYNVLKDSG 184 (189)
Q Consensus 154 ~~~~~~~-------~~p~~~~~~~~~~~~~~~~l~~~~ 184 (189)
.++-+.. ..|.+.+.|..+|...|+.+++.+
T Consensus 102 yVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 102 YVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG 139 (281)
T ss_pred eEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence 9875432 357888889999999999987653
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.3e-15 Score=117.16 Aligned_cols=140 Identities=16% Similarity=0.055 Sum_probs=95.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+.+...... +.++.++.+|++++++++++++..
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--------- 77 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAA--------- 77 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH---------
Confidence 68999999999999999999999999999999765443211 234566777777777776666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----HH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA----MK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~----~~ 140 (189)
.+..+++|++||++|....... .++|+.++.+++++ +.
T Consensus 78 ---------------------------~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 130 (287)
T PRK06194 78 ---------------------------LERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLML 130 (287)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 2333467888888886543211 23677776665554 55
Q ss_pred HCCc------cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNV------SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~------~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+. +++|++||..++...+ ....|..+|...+.+.+
T Consensus 131 ~~~~~~~~~~g~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 173 (287)
T PRK06194 131 AAAEKDPAYEGHIVNTASMAGLLAPP----AMGIYNVSKHAVVSLTE 173 (287)
T ss_pred hcCCCCCCCCeEEEEeCChhhccCCC----CCcchHHHHHHHHHHHH
Confidence 5543 5899999988765422 23457777777665554
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.1e-15 Score=117.40 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=94.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-ccC----CceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-EYH----SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
+|+||||+|++|++++++|+++|++|++++|....... ... .+++++.+|+.++++++++++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------------ 68 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE------------ 68 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh------------
Confidence 68999999999999999999999999888664322111 100 1345566666666665555432
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.++|++|+++|..... .....|+.++.+++++|.+.+++++|++
T Consensus 69 -----------------------------~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 119 (328)
T TIGR01179 69 -----------------------------HKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFS 119 (328)
T ss_pred -----------------------------CCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEe
Confidence 1467777777653221 1235688999999999999988999999
Q ss_pred ccceeecCCCC-------CCCCCccchhhHHHHHHHhh
Q psy3626 151 LSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 151 SS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~ 181 (189)
||...++.... .+.+...|...|...|..++
T Consensus 120 ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~ 157 (328)
T TIGR01179 120 SSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILR 157 (328)
T ss_pred cchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHH
Confidence 99876643211 11234567778888887776
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4e-15 Score=114.86 Aligned_cols=145 Identities=14% Similarity=0.159 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|+||++++++|+++|++|+++.|+.+. ...+ ...++.++.+|++++++++++++..
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 78 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTA-------- 78 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH--------
Confidence 689999999999999999999999999999987532 1111 1234567778888887777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-----CCCcceehhhHHHHHHHHHHC--CccEE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-----LSPTTVMSEGMKNIVTAMKEY--NVSVV 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-----~~~~~~~~~~~~~ll~~~~~~--~~~~~ 147 (189)
.+.++++|++|+++|.... ....++|..++.++++++.+. ..+++
T Consensus 79 ----------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~i 130 (248)
T PRK07806 79 ----------------------------REEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRV 130 (248)
T ss_pred ----------------------------HHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceE
Confidence 2333467888888875321 123568999999999998764 23589
Q ss_pred EEeccceeecCCC-CCCCCCccchhhHHHHHHHhhh
Q psy3626 148 SVCLSAFLFYEPS-KVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 148 i~iSS~~~~~~~~-~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
|++||........ ...+.+.+|..+|...+.+++.
T Consensus 131 v~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~ 166 (248)
T PRK07806 131 VFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRA 166 (248)
T ss_pred EEEeCchhhcCccccCCccccHHHHHHHHHHHHHHH
Confidence 9999865432111 1112255678888888887764
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.5e-15 Score=115.39 Aligned_cols=141 Identities=16% Similarity=0.050 Sum_probs=97.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
||+++||||+|+||++++++|+++|++|++++|+++.+.... ..++.++.+|+++++++.++++..
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~--------- 72 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF--------- 72 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH---------
Confidence 479999999999999999999999999999999865443211 115677888888888777666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHH----HHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNI----VTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~l----l~~~ 139 (189)
.+..+..|++|+++|...... ..++|+.++.++ ++.+
T Consensus 73 ---------------------------~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~ 125 (257)
T PRK07024 73 ---------------------------IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPM 125 (257)
T ss_pred ---------------------------HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHH
Confidence 233445788888888543211 123667776554 4567
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 126 ~~~~~~~iv~isS~~~~~~~~----~~~~Y~asK~a~~~~~~ 163 (257)
T PRK07024 126 RAARRGTLVGIASVAGVRGLP----GAGAYSASKAAAIKYLE 163 (257)
T ss_pred HhcCCCEEEEEechhhcCCCC----CCcchHHHHHHHHHHHH
Confidence 777778999999987764322 23346777777765553
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-15 Score=120.12 Aligned_cols=135 Identities=10% Similarity=0.061 Sum_probs=88.9
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCCc
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLPS 83 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (189)
|+||||+||||++++++|+++|++++++.|+.+..... ..+..+|+.+..+.+..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~--------------------- 56 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDF--------------------- 56 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHH---------------------
Confidence 89999999999999999999999877776664322110 11223343332211111
Q ss_pred cccCceeEEeccccCHHHHHHHh-----cCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 84 EYHSKVEIIQGDVLKLADVKKAI-----EGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
+.+.+ .++|+|||+++..... ...+.|+.++.+++++|++.+. +||++||.
T Consensus 57 ------------------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~ 117 (308)
T PRK11150 57 ------------------LAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSA 117 (308)
T ss_pred ------------------HHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcch
Confidence 11121 3579999998743221 1235788999999999999886 79999999
Q ss_pred eeecCCCC-------CCCCCccchhhHHHHHHHhhh
Q psy3626 154 FLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 154 ~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~ 182 (189)
.++++... ...+..+|..+|...|+.+++
T Consensus 118 ~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 153 (308)
T PRK11150 118 ATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQ 153 (308)
T ss_pred HHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 88765321 123345688888888877763
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.1e-15 Score=116.62 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=92.4
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCC--C---Ccc-cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQR--L---PSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~--~---~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+|+||||||++|++++++|+++| ++|++++|.... . ... ...++.++.+|+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~----------------- 63 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRE----------------- 63 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHH-----------------
Confidence 58999999999999999999987 788888764211 1 110 0113344445555544
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCcc
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVS 145 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~ 145 (189)
++.++++. +|+|||+++..... ...++|+.++.+++++|.+.+.+
T Consensus 64 --------------------------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 117 (317)
T TIGR01181 64 --------------------------LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHE 117 (317)
T ss_pred --------------------------HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44444444 67777777654321 12357889999999999987543
Q ss_pred -EEEEeccceeecCCCC--------CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 146 -VVSVCLSAFLFYEPSK--------VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 146 -~~i~iSS~~~~~~~~~--------~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
++|++||..+++.... ...+...|...|...|.+++ +.+++++
T Consensus 118 ~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 173 (317)
T TIGR01181 118 FRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPAL 173 (317)
T ss_pred ceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeE
Confidence 8999999877653211 11234567778888887765 3355554
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.2e-15 Score=113.57 Aligned_cols=140 Identities=16% Similarity=0.089 Sum_probs=96.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|+++++.|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 78 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKV--------- 78 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999987544321 1234667788888887777666542
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----C-------cceehhh----HHHHHHHH-
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----P-------TTVMSEG----MKNIVTAM- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----~-------~~~~~~~----~~~ll~~~- 139 (189)
.+..+++|++||++|...... + ..+|+.+ ++++++.+
T Consensus 79 ---------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~ 131 (262)
T PRK13394 79 ---------------------------AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMY 131 (262)
T ss_pred ---------------------------HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 223345788888887643221 1 1256777 77788888
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+..+.+++|++||..+.... +....|...|...+.+.+
T Consensus 132 ~~~~~~~iv~~ss~~~~~~~----~~~~~y~~sk~a~~~~~~ 169 (262)
T PRK13394 132 KDDRGGVVIYMGSVHSHEAS----PLKSAYVTAKHGLLGLAR 169 (262)
T ss_pred hhcCCcEEEEEcchhhcCCC----CCCcccHHHHHHHHHHHH
Confidence 66778899999997655422 122346666666554443
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4e-15 Score=115.75 Aligned_cols=142 Identities=17% Similarity=0.013 Sum_probs=98.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
||+++||||+|++|++++++|+++|++|++++|+++...++. ..++.++.+|+++++++.++++++.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--------- 71 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFA--------- 71 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH---------
Confidence 889999999999999999999999999999999876544321 2467788888888888777665430
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----HH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----KE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~~ 141 (189)
.+..++.|++|+++|...... ..++|+.++.++++++ +.
T Consensus 72 --------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 125 (260)
T PRK08267 72 --------------------------AATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKA 125 (260)
T ss_pred --------------------------HHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 011346788888888643221 1236777776666655 44
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 126 ~~~~~iv~isS~~~~~~~~----~~~~Y~~sKaa~~~~~~ 161 (260)
T PRK08267 126 TPGARVINTSSASAIYGQP----GLAVYSATKFAVRGLTE 161 (260)
T ss_pred CCCCEEEEeCchhhCcCCC----CchhhHHHHHHHHHHHH
Confidence 5567999999987655322 22346666666554444
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.2e-15 Score=118.07 Aligned_cols=129 Identities=14% Similarity=0.069 Sum_probs=90.9
Q ss_pred EEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCCcc
Q psy3626 5 AIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLPSE 84 (189)
Q Consensus 5 ~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (189)
+||||+||||+++++.|+++|++|+++.+. ..+|+++++++.+.++..
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~------------------ 48 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKE------------------ 48 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhcc------------------
Confidence 699999999999999999999988766432 146888887777766543
Q ss_pred ccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-----C---CCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 85 YHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-----L---SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-----~---~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
++|+|||+++.... . ...+.|+.++.+++++|++.+++++|++||+.++
T Consensus 49 -----------------------~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vy 105 (306)
T PLN02725 49 -----------------------KPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIY 105 (306)
T ss_pred -----------------------CCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeec
Confidence 34778888765321 1 1235789999999999999999999999999887
Q ss_pred cCCCCC----------C-CCCc-cchhhHHHHHHHhh----hcCCCCC
Q psy3626 157 YEPSKV----------P-PMFH-NVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 157 ~~~~~~----------p-~~~~-~~~~~~~~~~~~l~----~~~~~~t 188 (189)
+..... | .+.. .|..+|...|+.++ ..+++++
T Consensus 106 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 153 (306)
T PLN02725 106 PKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAI 153 (306)
T ss_pred CCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 642211 1 1112 26677777776554 3455554
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.4e-15 Score=111.84 Aligned_cols=137 Identities=19% Similarity=0.082 Sum_probs=104.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---C-CceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---H-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|.++||||+.+||.++++.|.++|++|++..|+.+.++++. . ..+..+..|++|+++++++++..
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~----------- 75 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEAL----------- 75 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHH-----------
Confidence 35899999999999999999999999999999998887653 2 45789999999999988888643
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~ 142 (189)
.+.+++.|++|+++|.....+- .++|+.| ++.+++.|.++
T Consensus 76 -------------------------~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r 130 (246)
T COG4221 76 -------------------------PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER 130 (246)
T ss_pred -------------------------HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 5667789999999996544321 1366666 56778888898
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHH
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYN 178 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~ 178 (189)
+.+++|.+||..+.+..+.. .-|+..|.....
T Consensus 131 ~~G~IiN~~SiAG~~~y~~~----~vY~ATK~aV~~ 162 (246)
T COG4221 131 KSGHIINLGSIAGRYPYPGG----AVYGATKAAVRA 162 (246)
T ss_pred CCceEEEeccccccccCCCC----ccchhhHHHHHH
Confidence 88899999999876532221 235555655543
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.6e-15 Score=124.36 Aligned_cols=141 Identities=23% Similarity=0.202 Sum_probs=94.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC---CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG---LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+|+|||||||+|+++++.|++.+ .+|+++.|.........+-...+...++.+ ...+.. |
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~-----~~~~~~-----------~ 75 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFK-----VLREKL-----------G 75 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHH-----HHHHhc-----------c
Confidence 589999999999999999999763 368999997654332111000112222211 100000 0
Q ss_pred CCCCccccCceeEEecccc-------CHHHHHHHhcCCCEEEEeeccCCCCC----CcceehhhHHHHHHHHHHC-CccE
Q psy3626 79 QRLPSEYHSKVEIIQGDVL-------KLADVKKAIEGKDGVVVALGTRNDLS----PTTVMSEGMKNIVTAMKEY-NVSV 146 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~vv~~~~~~~~~~----~~~~~~~~~~~ll~~~~~~-~~~~ 146 (189)
.........++.++.||+. +.+.+..+++++|+|||+|+...... ...+|+.++.+++++|++. ++++
T Consensus 76 ~~~~~~~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~ 155 (491)
T PLN02996 76 ENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKM 155 (491)
T ss_pred hhhhhhhhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 0000011347889999997 34456778889999999998765432 2358999999999999986 6889
Q ss_pred EEEeccceeecC
Q psy3626 147 VSVCLSAFLFYE 158 (189)
Q Consensus 147 ~i~iSS~~~~~~ 158 (189)
+|++||+.+++.
T Consensus 156 ~V~vST~~vyG~ 167 (491)
T PLN02996 156 LLHVSTAYVCGE 167 (491)
T ss_pred EEEEeeeEEecC
Confidence 999999988864
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.6e-15 Score=115.46 Aligned_cols=140 Identities=15% Similarity=0.041 Sum_probs=97.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+++||||+|++|++++++|+++|++|++++|+++....+...+..++.+|++++++++++++..
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------------- 66 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEEL-------------- 66 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHH--------------
Confidence 899999999999999999999999999999999876554433345677888988888877766543
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH---CCccE
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE---YNVSV 146 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~---~~~~~ 146 (189)
.+..+++|++|+++|....... .++|..+..++++.+.. .+.++
T Consensus 67 ----------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~ 124 (274)
T PRK05693 67 ----------------------EAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGL 124 (274)
T ss_pred ----------------------HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCE
Confidence 2334568999999885432211 23566666555555422 23468
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+|++||..+.... +....|...|...+.+.
T Consensus 125 iv~isS~~~~~~~----~~~~~Y~~sK~al~~~~ 154 (274)
T PRK05693 125 VVNIGSVSGVLVT----PFAGAYCASKAAVHALS 154 (274)
T ss_pred EEEECCccccCCC----CCccHHHHHHHHHHHHH
Confidence 9999998765432 12345666676655543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=112.41 Aligned_cols=139 Identities=17% Similarity=0.092 Sum_probs=96.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 75 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYA--------- 75 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999987654332 1245677888888888777766532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~ 140 (189)
.+..+++|++|+++|....... .+.|+.+ ++.+++.++
T Consensus 76 ---------------------------~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (258)
T PRK12429 76 ---------------------------VETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMK 128 (258)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHH
Confidence 2334467888888775432211 2246666 677777777
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+.+.++||++||..+....+ ....|...|...+.+.
T Consensus 129 ~~~~~~iv~iss~~~~~~~~----~~~~y~~~k~a~~~~~ 164 (258)
T PRK12429 129 AQGGGRIINMASVHGLVGSA----GKAAYVSAKHGLIGLT 164 (258)
T ss_pred hcCCeEEEEEcchhhccCCC----CcchhHHHHHHHHHHH
Confidence 78889999999987665322 2334556665555443
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.5e-15 Score=112.74 Aligned_cols=141 Identities=17% Similarity=0.115 Sum_probs=98.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+|++|++++++|+++|++|++++|+++..... ...++.++.+|+++++++.++++..
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------- 75 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF------- 75 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH-------
Confidence 6899999999999999999999999999999987544321 1235677788888887777766543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA---- 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~---- 138 (189)
.+.++++|++|+++|....... .++|+.+..+++++
T Consensus 76 -----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (248)
T PRK08251 76 -----------------------------RDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEI 126 (248)
T ss_pred -----------------------------HHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3445678999999886543211 23566665555554
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+++|++||..+... .|.....|..+|...+.+.+
T Consensus 127 ~~~~~~~~iv~~sS~~~~~~---~~~~~~~Y~~sK~a~~~~~~ 166 (248)
T PRK08251 127 FREQGSGHLVLISSVSAVRG---LPGVKAAYAASKAGVASLGE 166 (248)
T ss_pred HHhcCCCeEEEEeccccccC---CCCCcccHHHHHHHHHHHHH
Confidence 45667789999999876543 23334457777776655443
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.2e-15 Score=113.93 Aligned_cols=144 Identities=17% Similarity=0.079 Sum_probs=98.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||.+++++|+++|++|++++|+.+..+.. .+.++.++.+|++++++++++++..
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~--------- 83 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEET--------- 83 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999976543321 1234667778888877776665432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH---
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE--- 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~--- 141 (189)
.+...+.|++||++|.....+. .+.|..++.++++++..
T Consensus 84 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l 136 (259)
T PRK08213 84 ---------------------------LERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSM 136 (259)
T ss_pred ---------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHH
Confidence 2233567889999886432211 23677888888886644
Q ss_pred --CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 --YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 --~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.++||++||..+....+........|...|...+.+++
T Consensus 137 ~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~ 178 (259)
T PRK08213 137 IPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTR 178 (259)
T ss_pred HhcCCeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHH
Confidence 3567999999987665433221233457777777766555
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-14 Score=113.73 Aligned_cols=139 Identities=21% Similarity=0.044 Sum_probs=98.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|++|++++++|+++|++|++++|+++.+..+ ....+.++.+|+++++++++.++..
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 71 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETA------------ 71 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHH------------
Confidence 5799999999999999999999999999999987654322 1245677888888888877766543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~~~~~~ 143 (189)
.+.++++|++|+++|.....+. .++|+.++.++ ++.+++.+
T Consensus 72 ------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 127 (275)
T PRK08263 72 ------------------------VEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR 127 (275)
T ss_pred ------------------------HHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 3345678899999886543211 23677775444 44456777
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
.+++|++||..++...+ ....|...|...+.+.
T Consensus 128 ~~~iv~vsS~~~~~~~~----~~~~Y~~sKaa~~~~~ 160 (275)
T PRK08263 128 SGHIIQISSIGGISAFP----MSGIYHASKWALEGMS 160 (275)
T ss_pred CCEEEEEcChhhcCCCC----CccHHHHHHHHHHHHH
Confidence 78999999987765322 2334667777655444
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.5e-14 Score=111.38 Aligned_cols=135 Identities=15% Similarity=0.071 Sum_probs=98.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|++... .++.++.+|++++++++++++..
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~--------------- 66 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYV--------------- 66 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHH---------------
Confidence 6899999999999999999999999999999986442 35778999999999988877643
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHH----HHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIV----TAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll----~~~~~~~~~~ 146 (189)
.+.+++.|++|+++|.....+. .++|+.++.+++ +.+++.+.++
T Consensus 67 ---------------------~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ 125 (258)
T PRK06398 67 ---------------------ISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGV 125 (258)
T ss_pred ---------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeE
Confidence 3345568889998886432211 236666655554 4445556689
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+.... +....|..+|...+.+.+
T Consensus 126 iv~isS~~~~~~~----~~~~~Y~~sKaal~~~~~ 156 (258)
T PRK06398 126 IINIASVQSFAVT----RNAAAYVTSKHAVLGLTR 156 (258)
T ss_pred EEEeCcchhccCC----CCCchhhhhHHHHHHHHH
Confidence 9999998765421 233457777777766655
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-14 Score=111.28 Aligned_cols=142 Identities=11% Similarity=0.058 Sum_probs=95.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC-cccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP-SEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
||+++||||+|+||++++++|+++|++|++++|++.... .....++.++.+|+++++++++.++..
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------- 67 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGD------------- 67 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHH-------------
Confidence 889999999999999999999999999999999764321 112345778888999888887765431
Q ss_pred CCCccccCceeEEeccccCHHHHHHHh---cCCCEEEEeeccCCCC------------CCcceehhh----HHHHHHHHH
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAI---EGKDGVVVALGTRNDL------------SPTTVMSEG----MKNIVTAMK 140 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~vv~~~~~~~~~------------~~~~~~~~~----~~~ll~~~~ 140 (189)
+.+.+ .+.|++|+++|..... ...++|+.+ ++.+++.+.
T Consensus 68 ----------------------~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (243)
T PRK07023 68 ----------------------LLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS 125 (243)
T ss_pred ----------------------HHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh
Confidence 01111 2457777777754321 113467777 445555656
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+.... .....|...|...+.+++
T Consensus 126 ~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 162 (243)
T PRK07023 126 DAAERRILHISSGAARNAY----AGWSVYCATKAALDHHAR 162 (243)
T ss_pred ccCCCEEEEEeChhhcCCC----CCchHHHHHHHHHHHHHH
Confidence 5666799999998765421 223456667776666655
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-14 Score=111.50 Aligned_cols=140 Identities=18% Similarity=0.100 Sum_probs=97.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|++|.+++++|+++|++|++++|+++.+..+ ...++.++.+|++++++++++++..
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~------------ 68 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASL------------ 68 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHH------------
Confidence 5899999999999999999999999999999987654432 1245778888888888877766432
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------Ccceehhh----HHHHHHHHHHC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEG----MKNIVTAMKEY 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~----~~~ll~~~~~~ 142 (189)
.+.++++|.+|+++|...... ..++|+.+ ++++++.+++.
T Consensus 69 ------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (248)
T PRK10538 69 ------------------------PAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER 124 (248)
T ss_pred ------------------------HHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 233456788888887542111 02355555 55666667777
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++|++||..+.... .....|...|...+.+.+
T Consensus 125 ~~~~iv~isS~~~~~~~----~~~~~Y~~sK~~~~~~~~ 159 (248)
T PRK10538 125 NHGHIINIGSTAGSWPY----AGGNVYGATKAFVRQFSL 159 (248)
T ss_pred CCcEEEEECCcccCCCC----CCCchhHHHHHHHHHHHH
Confidence 77899999998764321 223356667766665554
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-14 Score=117.73 Aligned_cols=159 Identities=16% Similarity=0.213 Sum_probs=104.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+|||||||+|++++++|+++| ++|+++.|+++.... .+.+++.++....
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~---------------~~~l~~~~~~~~~------------ 53 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHA---------------MERLREALRSYRL------------ 53 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHH---------------HHHHHHHHHHhCC------------
Confidence 58999999999999999999998 679999997642210 0011111111000
Q ss_pred CCcccc-CceeEEeccccC------HHHHHHHhcCCCEEEEeeccCCCCCC----cceehhhHHHHHHHHHHCCccEEEE
Q psy3626 81 LPSEYH-SKVEIIQGDVLK------LADVKKAIEGKDGVVVALGTRNDLSP----TTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~d~vv~~~~~~~~~~~----~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
+..... .++..+.+|+.+ .+......+++|++||+++......+ ...|+.++.+++++|.+.+.++|++
T Consensus 54 ~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~ 133 (367)
T TIGR01746 54 WQEDLARERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHY 133 (367)
T ss_pred CCchhhhCCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEE
Confidence 000000 256666677653 34556667789999999886553322 2478999999999999998889999
Q ss_pred eccceeecCCCCC------------CCCCccchhhHHHHHHHhhh---cCCCCC
Q psy3626 150 CLSAFLFYEPSKV------------PPMFHNVNDDHQRMYNVLKD---SGLNYI 188 (189)
Q Consensus 150 iSS~~~~~~~~~~------------p~~~~~~~~~~~~~~~~l~~---~~~~~t 188 (189)
+||..++...... +.....|..+|...|..+++ .+++++
T Consensus 134 iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ 187 (367)
T TIGR01746 134 VSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVT 187 (367)
T ss_pred EccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999887542110 11234577788888887763 356554
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-14 Score=113.17 Aligned_cols=136 Identities=17% Similarity=-0.017 Sum_probs=96.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
++++||||+|+||++++++|+++|++|++.+|+++....... .++.++.+|++++++++++++..
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------- 72 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAV------------- 72 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHH-------------
Confidence 589999999999999999999999999999998765543211 24778889999999888777553
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHHHCCc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMKEYNV 144 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~~~~~ 144 (189)
.+.++++|++|+++|....... .++|+.+. +.+++.+++.+.
T Consensus 73 -----------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~ 129 (273)
T PRK07825 73 -----------------------EADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGR 129 (273)
T ss_pred -----------------------HHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3445678999999886543211 13555554 445666677778
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHH
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMY 177 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~ 177 (189)
++||++||..+....+ ....|..+|....
T Consensus 130 g~iv~isS~~~~~~~~----~~~~Y~asKaa~~ 158 (273)
T PRK07825 130 GHVVNVASLAGKIPVP----GMATYCASKHAVV 158 (273)
T ss_pred CEEEEEcCccccCCCC----CCcchHHHHHHHH
Confidence 8999999987754322 2334666665444
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-14 Score=111.77 Aligned_cols=141 Identities=16% Similarity=0.091 Sum_probs=94.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|++++||||+|++|++++++|+++|++|++++|+++....+ ...++.++.+|+.++++++.+++..
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 72 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAA-------- 72 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH--------
Confidence 67899999999999999999999999999999986544322 1235677788888887776666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH----HH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT----AM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~----~~ 139 (189)
.+.+.+.|++|++++....... ...|..++..+++ .+
T Consensus 73 ----------------------------~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 124 (255)
T TIGR01963 73 ----------------------------AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHM 124 (255)
T ss_pred ----------------------------HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3345567888888875432211 1246666545444 44
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+ ....|...|...+.+.+
T Consensus 125 ~~~~~~~~v~~ss~~~~~~~~----~~~~y~~sk~a~~~~~~ 162 (255)
T TIGR01963 125 KKQGWGRIINIASAHGLVASP----FKSAYVAAKHGLIGLTK 162 (255)
T ss_pred HhcCCeEEEEEcchhhcCCCC----CCchhHHHHHHHHHHHH
Confidence 667788999999976654322 22345566655554443
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-14 Score=111.30 Aligned_cols=141 Identities=13% Similarity=0.054 Sum_probs=94.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+++||||+|++|+.++++|+++|++|++++|+++....+ ...++.++.+|+++++++.++++.+
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 77 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAEL-------- 77 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHH--------
Confidence 67899999999999999999999999999999986544322 1235667778888777776666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~ 139 (189)
.+.++++|++|+++|....... ..+|..+..+ +++.+
T Consensus 78 ----------------------------~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 129 (241)
T PRK07454 78 ----------------------------LEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGM 129 (241)
T ss_pred ----------------------------HHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 2334567888888875432210 2255555444 44555
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..++...+ ....|...|...+.+.+
T Consensus 130 ~~~~~~~iv~isS~~~~~~~~----~~~~Y~~sK~~~~~~~~ 167 (241)
T PRK07454 130 RARGGGLIINVSSIAARNAFP----QWGAYCVSKAALAAFTK 167 (241)
T ss_pred HhcCCcEEEEEccHHhCcCCC----CccHHHHHHHHHHHHHH
Confidence 666668999999987654321 22346666666654443
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=4e-14 Score=110.32 Aligned_cols=140 Identities=21% Similarity=0.091 Sum_probs=103.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCC-ceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|.++||||+.+||.+++..|.++|..++.+.|...+++.. ... ++.++++|++|++++++.++..
T Consensus 13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~------- 85 (282)
T KOG1205|consen 13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA------- 85 (282)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH-------
Confidence 5799999999999999999999999988888887666533 112 4778888888888887777433
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------Ccceehhh----HHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEG----MKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~----~~~ll~~ 138 (189)
.+.+++.|++|+++|...... -.++|+.| |+.+++.
T Consensus 86 -----------------------------~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~ 136 (282)
T KOG1205|consen 86 -----------------------------IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPS 136 (282)
T ss_pred -----------------------------HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHH
Confidence 466789999999999766321 13466666 6677778
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+-++||.+||..+....|..+ -|+.+|.++..+..
T Consensus 137 m~~r~~GhIVvisSiaG~~~~P~~~----~Y~ASK~Al~~f~e 175 (282)
T KOG1205|consen 137 MKKRNDGHIVVISSIAGKMPLPFRS----IYSASKHALEGFFE 175 (282)
T ss_pred hhhcCCCeEEEEeccccccCCCccc----ccchHHHHHHHHHH
Confidence 8888878999999999866322211 45666666654443
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.2e-14 Score=109.57 Aligned_cols=139 Identities=14% Similarity=0.005 Sum_probs=99.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++. .....++.++.+|+.++++++++++..
T Consensus 7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~--------------- 69 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAI--------------- 69 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHH---------------
Confidence 589999999999999999999999999999998654 122356788899999998888777543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHH----C-Ccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKE----Y-NVS 145 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~----~-~~~ 145 (189)
.+.++++|++|+++|...... ..++|+.++..+++.+.. . +.+
T Consensus 70 ---------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g 128 (252)
T PRK07856 70 ---------------------VERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGG 128 (252)
T ss_pred ---------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCc
Confidence 334456788888887543211 123677777777776543 2 347
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
++|++||..+.... +....|..+|...+.+.+.
T Consensus 129 ~ii~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~~ 161 (252)
T PRK07856 129 SIVNIGSVSGRRPS----PGTAAYGAAKAGLLNLTRS 161 (252)
T ss_pred EEEEEcccccCCCC----CCCchhHHHHHHHHHHHHH
Confidence 99999998765422 2234577778777776663
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-14 Score=112.61 Aligned_cols=140 Identities=14% Similarity=0.025 Sum_probs=99.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+++....+. ..++.++.+|+++++++.++++.+
T Consensus 11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 81 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQA--------- 81 (263)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------
Confidence 68999999999999999999999999999999865443221 235667778888887777666433
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH---
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE--- 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~--- 141 (189)
.+.++++|++||++|....... ..+|..+..++.+++..
T Consensus 82 ---------------------------~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (263)
T PRK07814 82 ---------------------------VEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLML 134 (263)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHH
Confidence 3334578899998875332211 23677788888877753
Q ss_pred --CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 --YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 --~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+.... .....|...|...+.+.+
T Consensus 135 ~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 172 (263)
T PRK07814 135 EHSGGGSVINISSTMGRLAG----RGFAAYGTAKAALAHYTR 172 (263)
T ss_pred hhcCCeEEEEEccccccCCC----CCCchhHHHHHHHHHHHH
Confidence 456799999997765421 234467777877766655
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-14 Score=123.76 Aligned_cols=104 Identities=15% Similarity=0.206 Sum_probs=76.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+||||+||||++++++|+++|++|++++|.+.... ..+++++.+|+.++. +.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~---~~~ve~v~~Dl~d~~-l~--------------------- 55 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL---DPRVDYVCASLRNPV-LQ--------------------- 55 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc---cCCceEEEccCCCHH-HH---------------------
Confidence 48999999999999999999999999999998754321 234556666666552 33
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
+.+.++|+|||+++.... .+..+|+.++.|++++|++.++ ++|++||..
T Consensus 56 ----------------------~al~~~D~VIHLAa~~~~-~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~ 104 (699)
T PRK12320 56 ----------------------ELAGEADAVIHLAPVDTS-APGGVGITGLAHVANAAARAGA-RLLFVSQAA 104 (699)
T ss_pred ----------------------HHhcCCCEEEEcCccCcc-chhhHHHHHHHHHHHHHHHcCC-eEEEEECCC
Confidence 334456677777664321 2234689999999999999997 799998874
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-14 Score=112.49 Aligned_cols=139 Identities=17% Similarity=0.127 Sum_probs=96.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++++... .+.++.++.+|++++++++++++..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~-------- 80 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKEL-------- 80 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHH--------
Confidence 5799999999999999999999999999999986554321 1235778888888888877776532
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehh----hHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSE----GMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~----~~~~ll~~~ 139 (189)
. .+++.|++|+++|....... .++|.. .++.+++.+
T Consensus 81 ----------------------------~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m 131 (263)
T PRK08339 81 ----------------------------K-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAM 131 (263)
T ss_pred ----------------------------H-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 1 24568888888886433211 123433 366777788
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +.+..|...|...+.+.+
T Consensus 132 ~~~~~g~Ii~isS~~~~~~~----~~~~~y~asKaal~~l~~ 169 (263)
T PRK08339 132 ERKGFGRIIYSTSVAIKEPI----PNIALSNVVRISMAGLVR 169 (263)
T ss_pred HHcCCCEEEEEcCccccCCC----CcchhhHHHHHHHHHHHH
Confidence 77777899999998765321 123345566666655444
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=111.21 Aligned_cols=140 Identities=13% Similarity=0.018 Sum_probs=99.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|++.+...+ ...++.++.+|++++++++++++..
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------------ 78 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEV------------ 78 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHH------------
Confidence 6899999999999999999999999999998876543321 1245678888888888877766432
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------------CCcceehhhHHHHHHHHHH---C
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------------SPTTVMSEGMKNIVTAMKE---Y 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------------~~~~~~~~~~~~ll~~~~~---~ 142 (189)
.+..+++|++||++|..... ...++|+.++.++++++.. .
T Consensus 79 ------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (255)
T PRK05717 79 ------------------------LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRA 134 (255)
T ss_pred ------------------------HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 23345678888888864321 1124788888888888753 2
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+++|++||..+....+ ....|..+|...+.+.+
T Consensus 135 ~~g~ii~~sS~~~~~~~~----~~~~Y~~sKaa~~~~~~ 169 (255)
T PRK05717 135 HNGAIVNLASTRARQSEP----DTEAYAASKGGLLALTH 169 (255)
T ss_pred cCcEEEEEcchhhcCCCC----CCcchHHHHHHHHHHHH
Confidence 236899999987654322 23457777777766655
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.5e-14 Score=108.96 Aligned_cols=138 Identities=14% Similarity=0.064 Sum_probs=86.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++++||||+|++|++++++|+++|++|++++|++.....+ .......
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~------------------~~~~~~~--------------- 49 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTAL------------------RAEAARR--------------- 49 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------------------HHHHHhc---------------
Confidence 5899999999999999999999999999999975433211 0000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhc-CCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCCcc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIE-GKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYNVS 145 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~~~ 145 (189)
..++..+.+|+.+++++.+.+. ++|++|+++|.....+. .++|+.+ ++++++.+++.+.+
T Consensus 50 ----~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 125 (257)
T PRK09291 50 ----GLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG 125 (257)
T ss_pred ----CCcceEEEeeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 1123444555555555555444 67888888875432211 1244444 44566667777778
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+||++||..+.... +....|...|...+.+.
T Consensus 126 ~iv~~SS~~~~~~~----~~~~~Y~~sK~a~~~~~ 156 (257)
T PRK09291 126 KVVFTSSMAGLITG----PFTGAYCASKHALEAIA 156 (257)
T ss_pred eEEEEcChhhccCC----CCcchhHHHHHHHHHHH
Confidence 99999998665432 22345666676665443
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.8e-15 Score=116.53 Aligned_cols=142 Identities=15% Similarity=0.135 Sum_probs=92.6
Q ss_pred EEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
|+||||+|.||+.++++|++.+ .++++++|++..+..+... +.......
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~--------------l~~~~~~~---------------- 50 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERE--------------LRSRFPDP---------------- 50 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHH--------------CHHHC--T----------------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHH--------------Hhhccccc----------------
Confidence 7999999999999999999987 4799999987655432100 00000000
Q ss_pred ccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 83 SEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
..+-.+..+.+|+.|.+.+...++ ++|+|+|+|+..+.. .....|+.|++|++++|.+.++++||++||+
T Consensus 51 -~v~~~~~~vigDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTD 129 (293)
T PF02719_consen 51 -KVRFEIVPVIGDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTD 129 (293)
T ss_dssp -TCEEEEE--CTSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred -CcccccCceeecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Confidence 001122345667777777777777 789999999865522 2245899999999999999999999999998
Q ss_pred eeecCCCCCCCCCccchhhHHHHHHHhhhc
Q psy3626 154 FLFYEPSKVPPMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 154 ~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~ 183 (189)
-+.. +.+-+..+|..+|.++...
T Consensus 130 KAv~-------PtnvmGatKrlaE~l~~~~ 152 (293)
T PF02719_consen 130 KAVN-------PTNVMGATKRLAEKLVQAA 152 (293)
T ss_dssp GCSS---------SHHHHHHHHHHHHHHHH
T ss_pred ccCC-------CCcHHHHHHHHHHHHHHHH
Confidence 7643 3345888899999888743
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-14 Score=110.18 Aligned_cols=140 Identities=17% Similarity=0.090 Sum_probs=95.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|++|++++++|+++|++|++++|++....... ..++.++.+|+.++++++++++..
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------- 75 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAA---------- 75 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH----------
Confidence 68999999999999999999999999999999976543221 134668888888888877776543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------Ccceehhh----HHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEG----MKNIVTAMK 140 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~----~~~ll~~~~ 140 (189)
.+.++++|++|+++|...... ..+.|..+ ++.+++.++
T Consensus 76 --------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 129 (251)
T PRK07231 76 --------------------------LERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMR 129 (251)
T ss_pred --------------------------HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 233456788888887643221 12345555 445555666
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+....+ ....|...|...+.+.+
T Consensus 130 ~~~~~~iv~~sS~~~~~~~~----~~~~y~~sk~~~~~~~~ 166 (251)
T PRK07231 130 GEGGGAIVNVASTAGLRPRP----GLGWYNASKGAVITLTK 166 (251)
T ss_pred hcCCcEEEEEcChhhcCCCC----CchHHHHHHHHHHHHHH
Confidence 67778999999987765322 23345666665554443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.9e-14 Score=109.14 Aligned_cols=138 Identities=20% Similarity=0.107 Sum_probs=91.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+++||||+|++|.+++++|+++|++|++++|+++..... ...++.++.+|+++++++++.++.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 73 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL------- 73 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-------
Confidence 89999999999999999999999999999999987544321 1235667777777777766655433
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~--- 139 (189)
....|.+|+++|...... ..++|+.++.++++.+
T Consensus 74 --------------------------------~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (243)
T PRK07102 74 --------------------------------PALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANR 121 (243)
T ss_pred --------------------------------hhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 112466776666432211 1235667766665554
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+.+++|++||..+.... .....|...|...+.+.+
T Consensus 122 ~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 160 (243)
T PRK07102 122 FEARGSGTIVGISSVAGDRGR----ASNYVYGSAKAALTAFLS 160 (243)
T ss_pred HHhCCCCEEEEEecccccCCC----CCCcccHHHHHHHHHHHH
Confidence 45567899999998764432 223346667766554443
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.1e-14 Score=111.92 Aligned_cols=139 Identities=17% Similarity=0.099 Sum_probs=94.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+|++|+++++.|+++|++|++++|+++..... .+.++.++.+|+++++++++ ++..
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~------- 75 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLV------- 75 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHH-------
Confidence 4699999999999999999999999999999987544321 12356778888888877766 5332
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA---- 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~---- 138 (189)
.+.++++|++|+++|....... ..+|+.++.++++.
T Consensus 76 -----------------------------~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (280)
T PRK06914 76 -----------------------------LKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPY 126 (280)
T ss_pred -----------------------------HHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 2334567888888875442211 22566676555555
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+++|++||..+..+. .....|...|...+.+++
T Consensus 127 ~~~~~~~~iv~vsS~~~~~~~----~~~~~Y~~sK~~~~~~~~ 165 (280)
T PRK06914 127 MRKQKSGKIINISSISGRVGF----PGLSPYVSSKYALEGFSE 165 (280)
T ss_pred HHhcCCCEEEEECcccccCCC----CCCchhHHhHHHHHHHHH
Confidence 566777899999997665432 223356666766665544
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.4e-14 Score=109.10 Aligned_cols=140 Identities=14% Similarity=0.054 Sum_probs=94.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|++|++++++|+++|++|+++.|+.+..... ...++.++.+|++++++++++++..
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i---------- 75 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFV---------- 75 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH----------
Confidence 5899999999999999999999999999999986543321 1234677778888877777666432
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~~ 141 (189)
.+.+.++|++||++|....... ...|+.++ +.+++.+++
T Consensus 76 --------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (252)
T PRK06138 76 --------------------------AARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQR 129 (252)
T ss_pred --------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh
Confidence 2233467888888885432211 23556665 445556667
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.++++++||..+.... .....|...|...+.+.+
T Consensus 130 ~~~~~ii~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (252)
T PRK06138 130 QGGGSIVNTASQLALAGG----RGRAAYVASKGAIASLTR 165 (252)
T ss_pred cCCeEEEEECChhhccCC----CCccHHHHHHHHHHHHHH
Confidence 777899999998765432 223346666766655544
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.5e-14 Score=108.49 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=83.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|+++.|+++..... ....+.++.+|+++++++.++++..
T Consensus 5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~------- 77 (256)
T PRK09186 5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKS------- 77 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHH-------
Confidence 6899999999999999999999999999999987654321 1123556688888888877777543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC---CC-----------cceehh----hHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL---SP-----------TTVMSE----GMKNI 135 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~---~~-----------~~~~~~----~~~~l 135 (189)
.+.+++.|++|++++..... .. .++|.. .++.+
T Consensus 78 -----------------------------~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 128 (256)
T PRK09186 78 -----------------------------AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQF 128 (256)
T ss_pred -----------------------------HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHH
Confidence 23344578888887643210 00 113333 35666
Q ss_pred HHHHHHCCccEEEEeccceeec
Q psy3626 136 VTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 136 l~~~~~~~~~~~i~iSS~~~~~ 157 (189)
++.+++.+.+++|++||..+..
T Consensus 129 ~~~~~~~~~~~iv~~sS~~~~~ 150 (256)
T PRK09186 129 AKYFKKQGGGNLVNISSIYGVV 150 (256)
T ss_pred HHHHHhcCCceEEEEechhhhc
Confidence 7777777778999999977654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=111.45 Aligned_cols=140 Identities=9% Similarity=0.024 Sum_probs=95.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|++|++++++|+++|++|+++ .|++....++ ...++.++.+|++++++++++++..
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 76 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQI-------- 76 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH--------
Confidence 589999999999999999999999998764 6654432211 1245777888888888887777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
.+.++++|++|+++|.....+. .++|..++.++++++
T Consensus 77 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (250)
T PRK08063 77 ----------------------------DEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLM 128 (250)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2334567899998886433221 235666655555554
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||....... +....|..+|...+.+++
T Consensus 129 ~~~~~g~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~ 166 (250)
T PRK08063 129 EKVGGGKIISLSSLGSIRYL----ENYTTVGVSKAALEALTR 166 (250)
T ss_pred HhcCCeEEEEEcchhhccCC----CCccHHHHHHHHHHHHHH
Confidence 44566799999997654321 223457777887777665
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.7e-14 Score=110.99 Aligned_cols=138 Identities=16% Similarity=0.127 Sum_probs=97.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|.++|++|++++|+++... ..++.++.+|+++++++++.++..
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~--------------- 71 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAV--------------- 71 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHH---------------
Confidence 58999999999999999999999999999999865422 245778999999998887766432
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--C-----------CcceehhhHHH----HHHHHHHCCc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--S-----------PTTVMSEGMKN----IVTAMKEYNV 144 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~-----------~~~~~~~~~~~----ll~~~~~~~~ 144 (189)
.+.++++|++|+++|..... . ..++|..+..+ +++.+++.+.
T Consensus 72 ---------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (260)
T PRK06523 72 ---------------------LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGS 130 (260)
T ss_pred ---------------------HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC
Confidence 34456788899888843211 0 12356666544 4556666666
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..+... .+.....|...|...+.+.+
T Consensus 131 g~ii~isS~~~~~~---~~~~~~~Y~~sK~a~~~l~~ 164 (260)
T PRK06523 131 GVIIHVTSIQRRLP---LPESTTAYAAAKAALSTYSK 164 (260)
T ss_pred cEEEEEecccccCC---CCCCcchhHHHHHHHHHHHH
Confidence 79999999876532 22244567777777765554
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.7e-14 Score=110.08 Aligned_cols=141 Identities=18% Similarity=0.069 Sum_probs=97.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-CcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+|+||++++++|+++|++|+++.|+.+.. ..+...++.++.+|++++++++++++..
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~-------------- 73 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVV-------------- 73 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHH--------------
Confidence 6899999999999999999999999998887654322 2222235778899999998888877543
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCCcc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYNVS 145 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~~~ 145 (189)
.+.+++.|++|+++|.....+. .++|+.+ ++.+++.+++.+.+
T Consensus 74 ----------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g 131 (255)
T PRK06463 74 ----------------------EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNG 131 (255)
T ss_pred ----------------------HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc
Confidence 3345567888888876432111 2356666 46667777766668
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..++... +.....|..+|...+.+.+
T Consensus 132 ~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~~~~ 164 (255)
T PRK06463 132 AIVNIASNAGIGTA---AEGTTFYAITKAGIIILTR 164 (255)
T ss_pred EEEEEcCHHhCCCC---CCCccHhHHHHHHHHHHHH
Confidence 99999998765321 1223346777777665554
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-14 Score=111.43 Aligned_cols=140 Identities=17% Similarity=0.109 Sum_probs=97.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|++|++++++|+++|++|++++|+++..... .+.++.++.+|++++++++++++..
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 81 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAF--------- 81 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999986544321 1234667778888887777766543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK---- 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~---- 140 (189)
.+.+++.|++|+++|.....+. ..+|..++.++++++.
T Consensus 82 ---------------------------~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (255)
T PRK07523 82 ---------------------------EAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMI 134 (255)
T ss_pred ---------------------------HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3344568899999886533211 1266667666666554
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+... .+.+..|...|...+.+.+
T Consensus 135 ~~~~g~iv~iss~~~~~~----~~~~~~y~~sK~a~~~~~~ 171 (255)
T PRK07523 135 ARGAGKIINIASVQSALA----RPGIAPYTATKGAVGNLTK 171 (255)
T ss_pred HhCCeEEEEEccchhccC----CCCCccHHHHHHHHHHHHH
Confidence 445679999999765432 2234467777777766655
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3e-14 Score=110.86 Aligned_cols=140 Identities=19% Similarity=0.111 Sum_probs=96.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++.+++..
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 80 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA------- 80 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH-------
Confidence 5799999999999999999999999999999986544321 1234667778888877777666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~ 138 (189)
.+.+++.|++|+++|....... .++|..+...+ ++.
T Consensus 81 -----------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (260)
T PRK07063 81 -----------------------------EEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPG 131 (260)
T ss_pred -----------------------------HHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3344578899999885432211 23566665444 444
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~~----~~~~Y~~sKaa~~~~~~ 170 (260)
T PRK07063 132 MVERGRGSIVNIASTHAFKIIP----GCFPYPVAKHGLLGLTR 170 (260)
T ss_pred HHhhCCeEEEEECChhhccCCC----CchHHHHHHHHHHHHHH
Confidence 5556667999999987654322 23357777777766655
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-14 Score=113.97 Aligned_cols=144 Identities=14% Similarity=0.026 Sum_probs=97.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~------- 89 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL------- 89 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH-------
Confidence 5799999999999999999999999999999986543211 1234667778888887777666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC---------CCcceehhh----HHHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL---------SPTTVMSEG----MKNIVTAMK 140 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~---------~~~~~~~~~----~~~ll~~~~ 140 (189)
.+.+++.|++|+++|..... ....+|+.+ ++.+++.++
T Consensus 90 -----------------------------~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~ 140 (306)
T PRK06197 90 -----------------------------RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLL 140 (306)
T ss_pred -----------------------------HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHh
Confidence 22345678999998854321 113467777 777888888
Q ss_pred HCCccEEEEeccceeec-CCCCC--------CCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFY-EPSKV--------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~-~~~~~--------p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..... ....+ ......|..+|...+.+.+
T Consensus 141 ~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~ 190 (306)
T PRK06197 141 PVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTY 190 (306)
T ss_pred hCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHH
Confidence 77668999999986432 11000 1123456666766654444
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.3e-14 Score=107.55 Aligned_cols=137 Identities=18% Similarity=0.083 Sum_probs=93.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|++|++++++|+++|++|+++.|++...... ...++.++.+|+.+++++.+++++.
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 76 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAA--------- 76 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999987654321 1235667778888888777766543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~ 140 (189)
.+.+.++|++++++|...... ..+.|+.+..++++++ .
T Consensus 77 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 129 (246)
T PRK05653 77 ---------------------------VEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI 129 (246)
T ss_pred ---------------------------HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 233456788888887644321 1235666766666666 4
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHH
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYN 178 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~ 178 (189)
+.+.+++|++||..+.... .....|...|...+.
T Consensus 130 ~~~~~~ii~~ss~~~~~~~----~~~~~y~~sk~~~~~ 163 (246)
T PRK05653 130 KARYGRIVNISSVSGVTGN----PGQTNYSAAKAGVIG 163 (246)
T ss_pred hcCCcEEEEECcHHhccCC----CCCcHhHhHHHHHHH
Confidence 5667899999997664321 222345555554443
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.2e-14 Score=107.33 Aligned_cols=140 Identities=14% Similarity=0.083 Sum_probs=93.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-------ccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+++||||+|++|++++++|+++|++|+++.|+...... ....++.++.+|+.+++++++++++.
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 78 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAA------- 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHH-------
Confidence 4689999999999999999999999999887776542211 11245677788888887777766543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~--- 139 (189)
.+.+++.|++|+++|....... .+.|..+..++++.+
T Consensus 79 -----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (249)
T PRK12825 79 -----------------------------VERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP 129 (249)
T ss_pred -----------------------------HHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 2223467888888885433221 225566666666555
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
++.+.+++|++||..+....+ ....|...|...+.++
T Consensus 130 ~~~~~~~~~i~~SS~~~~~~~~----~~~~y~~sK~~~~~~~ 167 (249)
T PRK12825 130 MRKQRGGRIVNISSVAGLPGWP----GRSNYAAAKAGLVGLT 167 (249)
T ss_pred HHhcCCCEEEEECccccCCCCC----CchHHHHHHHHHHHHH
Confidence 566788999999988764321 2334666665554444
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.3e-14 Score=108.86 Aligned_cols=138 Identities=16% Similarity=0.031 Sum_probs=96.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|++++||||+|++|++++++|+++|++|++++|+++.+.++. ..++.++.+|++++++++++++....
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---------- 70 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF---------- 70 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc----------
Confidence 789999999999999999999999999999999876554332 24577888899988888887765411
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC--Ccc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~--~~~ 145 (189)
..|.+++++|...... ..++|..++.++++++... +.+
T Consensus 71 -----------------------------~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 121 (240)
T PRK06101 71 -----------------------------IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGH 121 (240)
T ss_pred -----------------------------CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 2355555555321111 1346788888888887652 336
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..+....+ ....|..+|...+.+.+
T Consensus 122 ~iv~isS~~~~~~~~----~~~~Y~asK~a~~~~~~ 153 (240)
T PRK06101 122 RVVIVGSIASELALP----RAEAYGASKAAVAYFAR 153 (240)
T ss_pred eEEEEechhhccCCC----CCchhhHHHHHHHHHHH
Confidence 899998876554321 23357777777766544
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.9e-14 Score=113.20 Aligned_cols=141 Identities=18% Similarity=0.182 Sum_probs=94.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+++.+++.. ...+.++.+|+++++++.++++..
T Consensus 41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~--------- 111 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADV--------- 111 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------
Confidence 57999999999999999999999999999999865543221 234567778888877776666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-------------cceehhhH----HHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-------------TTVMSEGM----KNIVTA 138 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-------------~~~~~~~~----~~ll~~ 138 (189)
.+.++++|++|+++|....... .++|..+. +.+++.
T Consensus 112 ---------------------------~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 164 (293)
T PRK05866 112 ---------------------------EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPG 164 (293)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334567888888876432211 12455554 444555
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+++|++||..+.... . +....|..+|...+.+.+
T Consensus 165 ~~~~~~g~iv~isS~~~~~~~--~-p~~~~Y~asKaal~~l~~ 204 (293)
T PRK05866 165 MLERGDGHIINVATWGVLSEA--S-PLFSVYNASKAALSAVSR 204 (293)
T ss_pred HHhcCCcEEEEECChhhcCCC--C-CCcchHHHHHHHHHHHHH
Confidence 667777899999997654321 1 223457777777665544
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.1e-14 Score=113.73 Aligned_cols=139 Identities=16% Similarity=0.111 Sum_probs=97.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++.+
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~--------- 79 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRA--------- 79 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986554322 1245667788888888877766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------ccee----hhhHHHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVM----SEGMKNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~----~~~~~~ll~~~~ 140 (189)
.+.++++|++|+++|.....+. .++| +.+++.+++.++
T Consensus 80 ---------------------------~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~ 132 (334)
T PRK07109 80 ---------------------------EEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMR 132 (334)
T ss_pred ---------------------------HHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3445678999999886432211 1233 334667788888
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+.+.++||++||..++...+ ....|..+|...+.+.
T Consensus 133 ~~~~g~iV~isS~~~~~~~~----~~~~Y~asK~a~~~~~ 168 (334)
T PRK07109 133 PRDRGAIIQVGSALAYRSIP----LQSAYCAAKHAIRGFT 168 (334)
T ss_pred hcCCcEEEEeCChhhccCCC----cchHHHHHHHHHHHHH
Confidence 87778999999998765322 2345666676655443
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.1e-14 Score=110.59 Aligned_cols=141 Identities=13% Similarity=0.061 Sum_probs=96.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+++++||||+|++|++++++|+++|++|+++.|+++...+. ...++.++.+|+++++++.++++..
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 81 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQA-------- 81 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH--------
Confidence 35899999999999999999999999999999876443221 1235667788888888877766543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
.+.+++.|++|+++|....... .++|..++.++++.+
T Consensus 82 ----------------------------~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~ 133 (274)
T PRK07775 82 ----------------------------EEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGM 133 (274)
T ss_pred ----------------------------HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2234467888888875432111 146777777766654
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+.++||++||..++...+ ....|...|...+.+.+
T Consensus 134 ~~~~~g~iv~isS~~~~~~~~----~~~~Y~~sK~a~~~l~~ 171 (274)
T PRK07775 134 IERRRGDLIFVGSDVALRQRP----HMGAYGAAKAGLEAMVT 171 (274)
T ss_pred HhcCCceEEEECChHhcCCCC----CcchHHHHHHHHHHHHH
Confidence 345567899999987665322 23356777777766554
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.9e-14 Score=114.21 Aligned_cols=119 Identities=18% Similarity=0.078 Sum_probs=86.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
++++||||+|+||++++++|+++|++|++++|+++....... ..+.++.+|++++++++++++..
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~------------- 93 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERF------------- 93 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHH-------------
Confidence 689999999999999999999999999999998665433211 23678888888888887766532
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---------Ccceehhh----HHHHHHHHHHCCccE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---------PTTVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---------~~~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
.+..+++|++|+++|...... ..++|+.+ ++.+++.+++.+.++
T Consensus 94 -----------------------~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~ 150 (315)
T PRK06196 94 -----------------------LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGAR 150 (315)
T ss_pred -----------------------HhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCe
Confidence 223456788999888543211 12366666 455666777776679
Q ss_pred EEEeccceee
Q psy3626 147 VSVCLSAFLF 156 (189)
Q Consensus 147 ~i~iSS~~~~ 156 (189)
+|++||....
T Consensus 151 iV~vSS~~~~ 160 (315)
T PRK06196 151 VVALSSAGHR 160 (315)
T ss_pred EEEECCHHhc
Confidence 9999997543
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.1e-14 Score=112.05 Aligned_cols=121 Identities=16% Similarity=0.154 Sum_probs=81.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||+|++++++|+++|++|+...+ |+.+.+.+...++.
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~------------------~~~~~~~v~~~l~~---------------- 55 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG------------------RLENRASLEADIDA---------------- 55 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEecC------------------ccCCHHHHHHHHHh----------------
Confidence 68999999999999999999999999875321 23333333333321
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----------CCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----------SPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----------~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
.++|+|||+++..... ...++|+.++.+++++|++.++++ +++|
T Consensus 56 -------------------------~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~s 109 (298)
T PLN02778 56 -------------------------VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYA 109 (298)
T ss_pred -------------------------cCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEe
Confidence 1468888888765321 113589999999999999999865 5556
Q ss_pred cceeecCC-------------CCCCCC-CccchhhHHHHHHHhhh
Q psy3626 152 SAFLFYEP-------------SKVPPM-FHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 152 S~~~~~~~-------------~~~p~~-~~~~~~~~~~~~~~l~~ 182 (189)
|+.++... ...|.+ ...|..+|...|.+++.
T Consensus 110 S~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~ 154 (298)
T PLN02778 110 TGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKN 154 (298)
T ss_pred cceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHH
Confidence 66554211 011222 25677889999988764
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.3e-14 Score=107.46 Aligned_cols=135 Identities=13% Similarity=0.003 Sum_probs=87.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+++||||+|++|+++++.|+++ ++|++++|+++..+.+. ...+.++.+|++++++++++++..
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 69 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL------------ 69 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc------------
Confidence 468999999999999999999999 99999999865433221 124566777777776666655431
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~ 143 (189)
+++|++|+++|....... ...|..+ ++++++.+++.+
T Consensus 70 ----------------------------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 121 (227)
T PRK08219 70 ----------------------------GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH 121 (227)
T ss_pred ----------------------------CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 135667777665332110 1234444 566666666654
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..+....+ ....|...|...+.+++
T Consensus 122 -~~~v~~ss~~~~~~~~----~~~~y~~~K~a~~~~~~ 154 (227)
T PRK08219 122 -GHVVFINSGAGLRANP----GWGSYAASKFALRALAD 154 (227)
T ss_pred -CeEEEEcchHhcCcCC----CCchHHHHHHHHHHHHH
Confidence 6899999987754322 23346666666554443
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.3e-14 Score=109.07 Aligned_cols=141 Identities=16% Similarity=0.090 Sum_probs=96.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||.+++++|+++|++|++++|++++.+.+ ...++.++.+|++++++++++++..
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 77 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALA--------- 77 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH---------
Confidence 4899999999999999999999999999999987654432 1235667788888888777766532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------Ccceehhh----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEG----MKNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~----~~~ll~~~ 139 (189)
.+.++++|++|+++|..... + ..++|+.+ ++.+++.+
T Consensus 78 ---------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l 130 (254)
T PRK07478 78 ---------------------------VERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAM 130 (254)
T ss_pred ---------------------------HHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 33345788999998864221 1 12355544 44556677
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..++.. . .+....|..+|...+.+.+
T Consensus 131 ~~~~~~~iv~~sS~~~~~~--~-~~~~~~Y~~sK~a~~~~~~ 169 (254)
T PRK07478 131 LARGGGSLIFTSTFVGHTA--G-FPGMAAYAASKAGLIGLTQ 169 (254)
T ss_pred HhcCCceEEEEechHhhcc--C-CCCcchhHHHHHHHHHHHH
Confidence 7777789999999876421 1 1223456677776655544
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8e-14 Score=108.12 Aligned_cols=140 Identities=12% Similarity=0.078 Sum_probs=97.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|++.....+ ...++.++.+|++++++++++++.+
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 76 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALA--------- 76 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987544322 1235678888888888877776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHHC-
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~~- 142 (189)
.+.++++|++|+++|...... ..++|..+...+++++...
T Consensus 77 ---------------------------~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 129 (258)
T PRK07890 77 ---------------------------LERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPAL 129 (258)
T ss_pred ---------------------------HHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 334567899999987643211 1236777777777766531
Q ss_pred --CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 --NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 --~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+++|++||....... +....|...|...+.+.+
T Consensus 130 ~~~~~~ii~~sS~~~~~~~----~~~~~Y~~sK~a~~~l~~ 166 (258)
T PRK07890 130 AESGGSIVMINSMVLRHSQ----PKYGAYKMAKGALLAASQ 166 (258)
T ss_pred HhCCCEEEEEechhhccCC----CCcchhHHHHHHHHHHHH
Confidence 23699999998765432 123356667766665554
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=108.36 Aligned_cols=138 Identities=12% Similarity=0.034 Sum_probs=93.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++.+|+.+..+.. ...++.++.+|+++++++.++++..
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i--------- 71 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQAC--------- 71 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986554321 1245667788888877776665432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~ 140 (189)
.+..++.|++|+++|....... .++|+.+ ++.+++.++
T Consensus 72 ---------------------------~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 124 (270)
T PRK05650 72 ---------------------------EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFK 124 (270)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 2334567888888886543221 1245444 445666677
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
+.+.+++|++||..+....+ ....|...|...+.+
T Consensus 125 ~~~~~~iv~vsS~~~~~~~~----~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 125 RQKSGRIVNIASMAGLMQGP----AMSSYNVAKAGVVAL 159 (270)
T ss_pred hCCCCEEEEECChhhcCCCC----CchHHHHHHHHHHHH
Confidence 77778999999987754322 233455566654433
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=107.70 Aligned_cols=137 Identities=14% Similarity=0.094 Sum_probs=96.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|++..... .++.++.+|++++++++++++..
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~--------------- 71 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEI--------------- 71 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHH---------------
Confidence 589999999999999999999999999999998765442 46778999999999888877543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------------------CcceehhhHHHHHHHHH-
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------------------PTTVMSEGMKNIVTAMK- 140 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~~- 140 (189)
.+.+++.|++|+++|...... ..++|+.+...+++++.
T Consensus 72 ---------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (266)
T PRK06171 72 ---------------------IEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVAR 130 (266)
T ss_pred ---------------------HHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHH
Confidence 233455677777776432110 12356666666655554
Q ss_pred ---HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 ---EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ---~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+....+ ....|...|...+.+.+
T Consensus 131 ~~~~~~~g~iv~isS~~~~~~~~----~~~~Y~~sK~a~~~l~~ 170 (266)
T PRK06171 131 QMVKQHDGVIVNMSSEAGLEGSE----GQSCYAATKAALNSFTR 170 (266)
T ss_pred HHHhcCCcEEEEEccccccCCCC----CCchhHHHHHHHHHHHH
Confidence 44557899999987754322 23356667777665554
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=106.78 Aligned_cols=140 Identities=15% Similarity=0.010 Sum_probs=93.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|++|++++++|+++|++|++++|++++.... ...++.++.+|+.+++++.+.++..
T Consensus 7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 77 (251)
T PRK12826 7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAG--------- 77 (251)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986543221 1234677778888877777766532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~ 140 (189)
.+.+.++|++|+++|.....+ ..+.|+.+..++++.+ .
T Consensus 78 ---------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (251)
T PRK12826 78 ---------------------------VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALI 130 (251)
T ss_pred ---------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 223346788888877654311 1235566666666655 4
Q ss_pred HCCccEEEEeccceee-cCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLF-YEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~-~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+. ... .....|...|...+.+++
T Consensus 131 ~~~~~~ii~~ss~~~~~~~~----~~~~~y~~sK~a~~~~~~ 168 (251)
T PRK12826 131 RAGGGRIVLTSSVAGPRVGY----PGLAHYAASKAGLVGFTR 168 (251)
T ss_pred HcCCcEEEEEechHhhccCC----CCccHHHHHHHHHHHHHH
Confidence 5667899999998765 211 122346666665554443
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=104.93 Aligned_cols=145 Identities=18% Similarity=0.081 Sum_probs=98.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|++++||||+|++|++++++|+++|++|++++|+++..+.+...++.++.+|++++++++++++...
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~------------- 67 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLD------------- 67 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhc-------------
Confidence 8899999999999999999999999999999998766554433456678889988887776543220
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------------CCcceehhhHHHHHHHHHH---CCc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------------SPTTVMSEGMKNIVTAMKE---YNV 144 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------------~~~~~~~~~~~~ll~~~~~---~~~ 144 (189)
-+++|++|+++|..... ...+.|+.++.++++++.. .+.
T Consensus 68 -------------------------~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 122 (222)
T PRK06953 68 -------------------------GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAG 122 (222)
T ss_pred -------------------------CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccC
Confidence 01357777777654211 1134677888888777754 223
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhhcC
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSG 184 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~ 184 (189)
++++++||..+.......+ ....|..+|...+.+++...
T Consensus 123 g~iv~isS~~~~~~~~~~~-~~~~Y~~sK~a~~~~~~~~~ 161 (222)
T PRK06953 123 GVLAVLSSRMGSIGDATGT-TGWLYRASKAALNDALRAAS 161 (222)
T ss_pred CeEEEEcCcccccccccCC-CccccHHhHHHHHHHHHHHh
Confidence 5789998876544321111 12247778888777776443
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.5e-14 Score=108.12 Aligned_cols=141 Identities=17% Similarity=0.084 Sum_probs=96.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|++++||||+|++|++++++|+++|++|++++|++...... ...++.++.+|+++++++..+++..
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 72 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAA-------- 72 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH--------
Confidence 68999999999999999999999999999999986543221 1235667777887777776666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---C---------cceehhhHHHHHHHHHH-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---P---------TTVMSEGMKNIVTAMKE- 141 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---~---------~~~~~~~~~~ll~~~~~- 141 (189)
.+.+++.|++|+++|...... . .++|+.++.++++.+..
T Consensus 73 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 124 (263)
T PRK06181 73 ----------------------------VARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPH 124 (263)
T ss_pred ----------------------------HHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 223346788888877543221 1 34677788887777642
Q ss_pred --CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 --YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 --~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..++... .....|...|...+.+.+
T Consensus 125 ~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~~~~~~~~ 162 (263)
T PRK06181 125 LKASRGQIVVVSSLAGLTGV----PTRSGYAASKHALHGFFD 162 (263)
T ss_pred HHhcCCEEEEEecccccCCC----CCccHHHHHHHHHHHHHH
Confidence 234789999998775432 123356677776665554
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-13 Score=104.74 Aligned_cols=140 Identities=19% Similarity=0.120 Sum_probs=93.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc----------cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE----------YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
|+++||||+|++|++++++|+++|++|+++.|......+. ...++.++.+|+.+++++++.++..
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 81 (249)
T PRK12827 7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG----- 81 (249)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH-----
Confidence 6899999999999999999999999999987653221110 1234556666766666666555322
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK 140 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~ 140 (189)
.+...++|++|+++|...... ...+|..++.++++++.
T Consensus 82 -------------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 82 -------------------------------VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred -------------------------------HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 222356788999988654221 12467788888888776
Q ss_pred -----HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -----EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -----~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+....+ ....|...|...+.+.+
T Consensus 131 ~~~~~~~~~~~iv~~sS~~~~~~~~----~~~~y~~sK~a~~~~~~ 172 (249)
T PRK12827 131 PPMIRARRGGRIVNIASVAGVRGNR----GQVNYAASKAGLIGLTK 172 (249)
T ss_pred HHHHhcCCCeEEEEECCchhcCCCC----CCchhHHHHHHHHHHHH
Confidence 45668999999987765322 23346666665554443
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=107.15 Aligned_cols=139 Identities=14% Similarity=0.043 Sum_probs=96.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++++||||+|++|+++++.|+++|++|+++.|++++.+.....++..+.+|+.+++++.++++....
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~------------- 69 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIA------------- 69 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHH-------------
Confidence 4799999999999999999999999999999987665544334577888999998887776654310
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~~~~~~~~ 146 (189)
...++.|.+++++|.....+. .+.|+.++.+ +++.+++.+.++
T Consensus 70 ----------------------~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~ 127 (256)
T PRK08017 70 ----------------------LTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGR 127 (256)
T ss_pred ----------------------hcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCE
Confidence 011346788888775332211 1345555444 577777777789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
+|++||..+.... +....|..+|...+.+
T Consensus 128 iv~~ss~~~~~~~----~~~~~Y~~sK~~~~~~ 156 (256)
T PRK08017 128 IVMTSSVMGLIST----PGRGAYAASKYALEAW 156 (256)
T ss_pred EEEEcCcccccCC----CCccHHHHHHHHHHHH
Confidence 9999997665432 2334566677666654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1e-13 Score=110.42 Aligned_cols=138 Identities=10% Similarity=0.018 Sum_probs=89.4
Q ss_pred EEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
|+||||+||+|+++++.|.++|+ +|++++|..... .........+..|+.+++.++.+.+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~----------------- 62 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKG----------------- 62 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhh-----------------
Confidence 68999999999999999999997 688877654321 11101112334444444433332210
Q ss_pred ccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 83 SEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
.+.++|+|||+++..... ....+|+.++.+++++|++.+. +||++||+.++.
T Consensus 63 ----------------------~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~ 119 (314)
T TIGR02197 63 ----------------------AFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYG 119 (314)
T ss_pred ----------------------ccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcC
Confidence 123578888888753221 1134788999999999999886 899999988776
Q ss_pred CCCC------C-CCCCccchhhHHHHHHHhhh
Q psy3626 158 EPSK------V-PPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 158 ~~~~------~-p~~~~~~~~~~~~~~~~l~~ 182 (189)
+... . ..+...|..+|...|+.+++
T Consensus 120 ~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 120 DGEAGFREGRELERPLNVYGYSKFLFDQYVRR 151 (314)
T ss_pred CCCCCcccccCcCCCCCHHHHHHHHHHHHHHH
Confidence 4211 1 12455677788888887763
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.1e-14 Score=107.85 Aligned_cols=141 Identities=13% Similarity=0.033 Sum_probs=94.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+++++||||+|++|++++++|+++|++|++++|+.+....+ ...++.++.+|++++++++++++..
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-------- 74 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAA-------- 74 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH--------
Confidence 47899999999999999999999999999999886543321 1235677778887777776666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~---- 139 (189)
.+.+.++|++|+++|...... ..++|+.+..++++++
T Consensus 75 ----------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 126 (250)
T TIGR03206 75 ----------------------------EQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGM 126 (250)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 223346788888887532211 1235667766655554
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..++...+ ....|...|.+.+.+.+
T Consensus 127 ~~~~~~~ii~iss~~~~~~~~----~~~~Y~~sK~a~~~~~~ 164 (250)
T TIGR03206 127 VERGAGRIVNIASDAARVGSS----GEAVYAACKGGLVAFSK 164 (250)
T ss_pred HhcCCeEEEEECchhhccCCC----CCchHHHHHHHHHHHHH
Confidence 456678999999987765432 22346666655544443
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-13 Score=114.75 Aligned_cols=139 Identities=19% Similarity=0.147 Sum_probs=103.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+||||+|.+|+.+++++++.+. +++.++|++-+.... ...+++.-.
T Consensus 251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i------------------~~el~~~~~------------ 300 (588)
T COG1086 251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLI------------------DMELREKFP------------ 300 (588)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHH------------------HHHHHhhCC------------
Confidence 6899999999999999999999875 678888886554321 111111000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
+.+++.+-||+.|.+.+..++++ +|+|+|+|+..+-. .....|+.||.|++++|.+.++++||.+|
T Consensus 301 -----~~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iS 375 (588)
T COG1086 301 -----ELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIS 375 (588)
T ss_pred -----CcceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEe
Confidence 22566667777777777777776 89999999866543 22358999999999999999999999999
Q ss_pred cceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 152 SAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 152 S~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
|+-+.+ |.+.+..+|..+|..+..
T Consensus 376 TDKAV~-------PtNvmGaTKr~aE~~~~a 399 (588)
T COG1086 376 TDKAVN-------PTNVMGATKRLAEKLFQA 399 (588)
T ss_pred cCcccC-------CchHhhHHHHHHHHHHHH
Confidence 987654 344578888888887763
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=105.45 Aligned_cols=139 Identities=14% Similarity=0.053 Sum_probs=94.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc----ccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS----EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++++||||+|++|+.++++|+++|++|++++|++.+... +......++.+|+.+.++++++++..
T Consensus 8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----------- 76 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEV----------- 76 (239)
T ss_pred CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHH-----------
Confidence 589999999999999999999999999999998654321 12234667778888888877766543
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----HHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----KEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~~~ 142 (189)
.+.++++|++++++|...... ....|..++.++++++ ++.
T Consensus 77 -------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (239)
T PRK12828 77 -------------------------NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS 131 (239)
T ss_pred -------------------------HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Confidence 234456788888877543211 1235666666666655 455
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+.+++|++||..++... +....|...|...+.++
T Consensus 132 ~~~~iv~~sS~~~~~~~----~~~~~y~~sk~a~~~~~ 165 (239)
T PRK12828 132 GGGRIVNIGAGAALKAG----PGMGAYAAAKAGVARLT 165 (239)
T ss_pred CCCEEEEECchHhccCC----CCcchhHHHHHHHHHHH
Confidence 67899999998876532 22334555665544444
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.8e-14 Score=108.42 Aligned_cols=137 Identities=12% Similarity=-0.019 Sum_probs=93.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|++. .... ...++.++.+|+++++++.++++..
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 78 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAA--------- 78 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHH---------
Confidence 58999999999999999999999999999998742 1111 1234667778888877776666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-CCC-----------cceehhh----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-LSP-----------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-~~~-----------~~~~~~~----~~~ll~~~ 139 (189)
.+.+++.|++|+++|.... .+. .++|..+ ++.+++.+
T Consensus 79 ---------------------------~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 131 (260)
T PRK12823 79 ---------------------------VEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHM 131 (260)
T ss_pred ---------------------------HHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2334568899998874321 110 1234433 45677777
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..++. ....+|..+|...+.+.+
T Consensus 132 ~~~~~g~iv~~sS~~~~~------~~~~~Y~~sK~a~~~~~~ 167 (260)
T PRK12823 132 LAQGGGAIVNVSSIATRG------INRVPYSAAKGGVNALTA 167 (260)
T ss_pred HhcCCCeEEEEcCccccC------CCCCccHHHHHHHHHHHH
Confidence 777778999999987542 123357777777766555
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-13 Score=106.62 Aligned_cols=140 Identities=13% Similarity=0.053 Sum_probs=96.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||++++++|+++|++|++++|+++...++ ...++.++.+|++++++++++++.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------------ 74 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATV------------ 74 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHH------------
Confidence 6899999999999999999999999999999987654332 2345778899999998888877543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----------CcceehhhHHHHHHHHHH---CCcc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----------PTTVMSEGMKNIVTAMKE---YNVS 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----------~~~~~~~~~~~ll~~~~~---~~~~ 145 (189)
.+.++++|++|+++|...... ..++|+.+...+.+.+.. .+.+
T Consensus 75 ------------------------~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g 130 (261)
T PRK08265 75 ------------------------VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGG 130 (261)
T ss_pred ------------------------HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCc
Confidence 344567788888887532211 123466665555544332 3447
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..+....+. ...|...|...+.+.+
T Consensus 131 ~ii~isS~~~~~~~~~----~~~Y~asKaa~~~~~~ 162 (261)
T PRK08265 131 AIVNFTSISAKFAQTG----RWLYPASKAAIRQLTR 162 (261)
T ss_pred EEEEECchhhccCCCC----CchhHHHHHHHHHHHH
Confidence 9999999876553222 2346666766655544
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-13 Score=107.16 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=94.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|+++.|+ ...+.+ ...++.++.+|+++++++++.++..
T Consensus 16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~--------- 85 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEA--------- 85 (258)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH---------
Confidence 589999999999999999999999999999987 322211 1235677888888888777766532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~ 140 (189)
.+.+++.|++|+++|.....+. .++|..+. +.+++.++
T Consensus 86 ---------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (258)
T PRK06935 86 ---------------------------LEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMA 138 (258)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 2334567888888875432211 22556664 44455666
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..++...+ ....|...|...+.+.+
T Consensus 139 ~~~~g~iv~isS~~~~~~~~----~~~~Y~asK~a~~~~~~ 175 (258)
T PRK06935 139 KQGSGKIINIASMLSFQGGK----FVPAYTASKHGVAGLTK 175 (258)
T ss_pred hcCCeEEEEECCHHhccCCC----CchhhHHHHHHHHHHHH
Confidence 66668999999987754322 22356777777766555
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=2e-13 Score=104.92 Aligned_cols=139 Identities=17% Similarity=0.074 Sum_probs=94.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|++|+++++.|+++|+.|++..|+++.+..+ ...++.++.+|+++.++++++++..
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 74 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKA------------ 74 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH------------
Confidence 5899999999999999999999999998888876554432 1235778888888888887776442
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----HHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----KEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~~~~ 143 (189)
.+.+.++|++|+++|...... ..++|+.+..++++++ .+.+
T Consensus 75 ------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (245)
T PRK12936 75 ------------------------EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR 130 (245)
T ss_pred ------------------------HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC
Confidence 334556888888888643221 1246777766665554 3455
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
.+++|++||..+....+. ...|...|.....+.
T Consensus 131 ~~~iv~~sS~~~~~~~~~----~~~Y~~sk~a~~~~~ 163 (245)
T PRK12936 131 YGRIINITSVVGVTGNPG----QANYCASKAGMIGFS 163 (245)
T ss_pred CCEEEEECCHHhCcCCCC----CcchHHHHHHHHHHH
Confidence 679999999876654322 223555555444333
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=107.10 Aligned_cols=140 Identities=18% Similarity=0.161 Sum_probs=96.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||++++++|+++|++|++++|+.+...++. ..++.++.+|+.+++++.++++..
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 73 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARC------------ 73 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHH------------
Confidence 58999999999999999999999999999999865443321 235677888888888777766542
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC------C----------CCcceehhhHHHHHHHHH--
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND------L----------SPTTVMSEGMKNIVTAMK-- 140 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~------~----------~~~~~~~~~~~~ll~~~~-- 140 (189)
.+.+++.|++|+++|.... . ...++|+.++.++++++.
T Consensus 74 ------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 129 (262)
T TIGR03325 74 ------------------------VAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPA 129 (262)
T ss_pred ------------------------HHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHH
Confidence 3344567888888874211 0 123467777766666554
Q ss_pred --HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 141 --EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 141 --~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
+.+ +++|++||..+....+ ....|..+|...+.+.+.
T Consensus 130 ~~~~~-g~iv~~sS~~~~~~~~----~~~~Y~~sKaa~~~l~~~ 168 (262)
T TIGR03325 130 LVASR-GSVIFTISNAGFYPNG----GGPLYTAAKHAVVGLVKE 168 (262)
T ss_pred HhhcC-CCEEEEeccceecCCC----CCchhHHHHHHHHHHHHH
Confidence 333 5788888877654211 223467777777766653
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.8e-13 Score=103.15 Aligned_cols=135 Identities=19% Similarity=0.184 Sum_probs=93.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++++||||+|++|++++++|+++|+ +|+++.|++++..+ ...++.++.+|+.++++++++++..
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~-------------- 71 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAA-------------- 71 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhc--------------
Confidence 3799999999999999999999998 99999998766543 3356778888888888777666532
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-CCC-----------CcceehhhHHHHHHHH----HHCCc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN-DLS-----------PTTVMSEGMKNIVTAM----KEYNV 144 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~-~~~-----------~~~~~~~~~~~ll~~~----~~~~~ 144 (189)
+..|++|+++|... ... ..++|..+..++++++ ++.+.
T Consensus 72 --------------------------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 125 (238)
T PRK08264 72 --------------------------SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGG 125 (238)
T ss_pred --------------------------CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 23577777777521 111 0235667776666664 34567
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..++... .....|...|...+.+.+
T Consensus 126 ~~~v~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~ 158 (238)
T PRK08264 126 GAIVNVLSVLSWVNF----PNLGTYSASKAAAWSLTQ 158 (238)
T ss_pred CEEEEEcChhhccCC----CCchHhHHHHHHHHHHHH
Confidence 799999998765432 223346666666654443
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=105.50 Aligned_cols=139 Identities=17% Similarity=0.101 Sum_probs=95.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
+++||||+|++|+++++.|+++|++|++++|+ ++....+. ......+.+|++++++++++++..
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------- 73 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA------- 73 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH-------
Confidence 48999999999999999999999999999997 43322110 112335677888877777666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehh----hHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSE----GMKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~----~~~~ll~~ 138 (189)
.+.++++|++|+++|....... .++|.. +++++++.
T Consensus 74 -----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 124 (251)
T PRK07069 74 -----------------------------ADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPY 124 (251)
T ss_pred -----------------------------HHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3445678899999886543211 124554 67888899
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.++||++||..++...+ ....|...|...+.+.+
T Consensus 125 ~~~~~~~~ii~~ss~~~~~~~~----~~~~Y~~sK~a~~~~~~ 163 (251)
T PRK07069 125 LRASQPASIVNISSVAAFKAEP----DYTAYNASKAAVASLTK 163 (251)
T ss_pred HhhcCCcEEEEecChhhccCCC----CCchhHHHHHHHHHHHH
Confidence 9888788999999988765322 22346666666554443
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=106.85 Aligned_cols=140 Identities=17% Similarity=0.090 Sum_probs=94.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc----CCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++++||||+|++|++++++|+++|++|+++.|+++...... +.++.++.+|+++++++.++++..
T Consensus 12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----------- 80 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTA----------- 80 (264)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHH-----------
Confidence 58999999999999999999999999999999865443221 124577888888888877766542
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHH----HH
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAM----KE 141 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~----~~ 141 (189)
.+.+.++|++|+++|...... ..+.|..++.++++++ ..
T Consensus 81 -------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 135 (264)
T PRK12829 81 -------------------------VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKA 135 (264)
T ss_pred -------------------------HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 344557788888888652211 1235666766666655 44
Q ss_pred CCc-cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNV-SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~-~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. ++++++||..+....+ ....|...|...+.+++
T Consensus 136 ~~~~~~vv~~ss~~~~~~~~----~~~~y~~~K~a~~~~~~ 172 (264)
T PRK12829 136 SGHGGVIIALSSVAGRLGYP----GRTPYAASKWAVVGLVK 172 (264)
T ss_pred CCCCeEEEEecccccccCCC----CCchhHHHHHHHHHHHH
Confidence 444 6788877765543221 22346777777666554
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-13 Score=106.00 Aligned_cols=137 Identities=15% Similarity=0.061 Sum_probs=95.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++++|+++|++|++++|+++..... ...+..++.+|++++++++++++..
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 77 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADAT--------- 77 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986543221 1124566778888777766655432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--------C------CcceehhhHHHHHHHHH-
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--------S------PTTVMSEGMKNIVTAMK- 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--------~------~~~~~~~~~~~ll~~~~- 140 (189)
.+.+++.|++||++|..... . ..+.|+.++.++++++.
T Consensus 78 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (250)
T PRK07774 78 ---------------------------VSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYK 130 (250)
T ss_pred ---------------------------HHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 33345678888888864211 0 12367777777666665
Q ss_pred ---HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 ---EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ---~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+.+++|++||..++.. ...|..+|...+.+.+
T Consensus 131 ~~~~~~~~~iv~~sS~~~~~~-------~~~Y~~sK~a~~~~~~ 167 (250)
T PRK07774 131 HMAKRGGGAIVNQSSTAAWLY-------SNFYGLAKVGLNGLTQ 167 (250)
T ss_pred HHHHhCCcEEEEEecccccCC-------ccccHHHHHHHHHHHH
Confidence 344679999999876532 2357777777766655
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.6e-13 Score=103.52 Aligned_cols=140 Identities=16% Similarity=0.051 Sum_probs=93.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc------ccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|++|++++++|+++|++|++++|++... .. ....++.++.+|+++++++.++++..
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-------- 74 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEI-------- 74 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH--------
Confidence 5899999999999999999999999999999885311 00 01234677777888777777666542
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~~ 139 (189)
.+.+.+.|++|+++|....... .+.|+.+..++ ++.+
T Consensus 75 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 126 (245)
T PRK12824 75 ----------------------------EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAM 126 (245)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2334567889988886432211 13566665554 5666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+ ....|...|...+.+.+
T Consensus 127 ~~~~~~~iv~iss~~~~~~~~----~~~~Y~~sK~a~~~~~~ 164 (245)
T PRK12824 127 CEQGYGRIINISSVNGLKGQF----GQTNYSAAKAGMIGFTK 164 (245)
T ss_pred HHhCCeEEEEECChhhccCCC----CChHHHHHHHHHHHHHH
Confidence 666778999999987664322 12346666665554443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-13 Score=106.34 Aligned_cols=142 Identities=15% Similarity=0.060 Sum_probs=96.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Ccc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|+||++++++|+++|++|++++|+.+.. .+. ...++.++.+|++++++++++++.+
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~-------- 80 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVART-------- 80 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH--------
Confidence 5799999999999999999999999999999875422 211 1235677888888888887777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~ 139 (189)
.+.+++.|++|+++|....... .++|+.+... +++.+
T Consensus 81 ----------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (254)
T PRK06114 81 ----------------------------EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAM 132 (254)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHH
Confidence 3445667889998886432211 2366666644 45555
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+.. ....|...|...+.+.+
T Consensus 133 ~~~~~~~iv~isS~~~~~~~~~~--~~~~Y~~sKaa~~~l~~ 172 (254)
T PRK06114 133 LENGGGSIVNIASMSGIIVNRGL--LQAHYNASKAGVIHLSK 172 (254)
T ss_pred HhcCCcEEEEECchhhcCCCCCC--CcchHHHHHHHHHHHHH
Confidence 66666799999998765432211 13346666766655544
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=105.71 Aligned_cols=139 Identities=17% Similarity=0.043 Sum_probs=91.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|++++|+||+|++|++++++|+++|++|+++ .|+++....+ ...++.++.+|+++++++.+.++..
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------- 77 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQI------- 77 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH-------
Confidence 4689999999999999999999999999998 8876543221 1234667778888877776665432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~--- 139 (189)
.+.+.++|++|+++|...... ...+|..+..++++.+
T Consensus 78 -----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (247)
T PRK05565 78 -----------------------------VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPY 128 (247)
T ss_pred -----------------------------HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 233446788888888653211 1235666655555444
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
.+.+.+++|++||.......+. ...|...|...+.+
T Consensus 129 ~~~~~~~~~v~~sS~~~~~~~~~----~~~y~~sK~a~~~~ 165 (247)
T PRK05565 129 MIKRKSGVIVNISSIWGLIGASC----EVLYSASKGAVNAF 165 (247)
T ss_pred HHhcCCcEEEEECCHhhccCCCC----ccHHHHHHHHHHHH
Confidence 4556678999999877654222 22455555544433
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.4e-14 Score=109.37 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=93.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++++|+++|++|++++|+++....+ ...++.++.+|++++++++++++..
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~--------- 81 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI--------- 81 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986543321 1235677888888888777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------------------------Ccceeh
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------------------------PTTVMS 129 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------------------------~~~~~~ 129 (189)
.+.++++|++|+++|...+.. ..++|+
T Consensus 82 ---------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 134 (278)
T PRK08277 82 ---------------------------LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNL 134 (278)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhh
Confidence 223345666777666332110 012455
Q ss_pred hhH----HHHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 130 EGM----KNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 130 ~~~----~~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. +.+++.+++.+.+++|++||..++...+ ....|..+|...+.+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----~~~~Y~~sK~a~~~l~~ 186 (278)
T PRK08277 135 LGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLT----KVPAYSAAKAAISNFTQ 186 (278)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCC----CCchhHHHHHHHHHHHH
Confidence 554 3556666666668999999988764322 23356777777766655
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.1e-13 Score=107.22 Aligned_cols=135 Identities=16% Similarity=0.011 Sum_probs=93.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++.+|+++.+... ...++.++.+|++++++++++++.+
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~--------- 77 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEA--------- 77 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999886544322 1234667788888888877766543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+.++++|++||++|....... .++|+.+..++++++ .
T Consensus 78 ---------------------------~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~ 130 (275)
T PRK05876 78 ---------------------------FRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLL 130 (275)
T ss_pred ---------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 3345568999999886432211 246666766655554 4
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHH
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRM 176 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~ 176 (189)
+.+ .+++|++||..++... +....|..+|...
T Consensus 131 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~ 163 (275)
T PRK05876 131 EQGTGGHVVFTASFAGLVPN----AGLGAYGVAKYGV 163 (275)
T ss_pred hcCCCCEEEEeCChhhccCC----CCCchHHHHHHHH
Confidence 554 5799999998776422 2233466666653
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1e-13 Score=109.05 Aligned_cols=140 Identities=14% Similarity=0.043 Sum_probs=95.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+|+||++++++|+++|++|++++|+++...++ ...++.++++|++++++++++++..
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---------- 88 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFT---------- 88 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHH----------
Confidence 5799999999999999999999999999999875433221 1135677888888888777766532
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C------------CcceehhhHHHHHHHHH---
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S------------PTTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~------------~~~~~~~~~~~ll~~~~--- 140 (189)
.+.++++|++||++|..... . ..++|+.++.++++++.
T Consensus 89 --------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (280)
T PLN02253 89 --------------------------VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIM 142 (280)
T ss_pred --------------------------HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 33445788899988864321 0 13467777776666554
Q ss_pred -HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 143 ~~~~~g~ii~isS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 180 (280)
T PLN02253 143 IPLKKGSIVSLCSVASAIGGL----GPHAYTGSKHAVLGLTR 180 (280)
T ss_pred HhcCCceEEEecChhhcccCC----CCcccHHHHHHHHHHHH
Confidence 34446899998877644221 12357777777766655
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.8e-14 Score=108.08 Aligned_cols=142 Identities=11% Similarity=0.018 Sum_probs=93.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|++++||||+|++|++++++|+++|++|++. .|+++...+. .+.++.++.+|++++++++++++..
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~------- 73 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAI------- 73 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHH-------
Confidence 8899999999999999999999999999875 4554332211 1234677888888888888777653
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHH--
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAM-- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~-- 139 (189)
.+...+.|++|+++|...... ..++|+.++.++.+.+
T Consensus 74 -----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (247)
T PRK09730 74 -----------------------------DQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124 (247)
T ss_pred -----------------------------HHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 233456788999888642211 1235666655444433
Q ss_pred --HHC---CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 --KEY---NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 --~~~---~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. +.++||++||..+.... |..+..|...|...+.+++
T Consensus 125 ~~~~~~~~~~g~~v~~sS~~~~~~~---~~~~~~Y~~sK~~~~~~~~ 168 (247)
T PRK09730 125 RMALKHGGSGGAIVNVSSAASRLGA---PGEYVDYAASKGAIDTLTT 168 (247)
T ss_pred HHHhcCCCCCcEEEEECchhhccCC---CCcccchHhHHHHHHHHHH
Confidence 322 23579999998765432 2223457777777665544
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=106.81 Aligned_cols=140 Identities=15% Similarity=0.054 Sum_probs=97.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++|+||+|+||+.++++|.++|++|++++|+++...... +.++.++.+|++++++++.+++.+
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 82 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV------- 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH-------
Confidence 68999999999999999999999999999999865443211 235667788888887777666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~--- 139 (189)
.+.+++.|++|+++|.....+ ...+|+.+..++++++
T Consensus 83 -----------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 133 (257)
T PRK09242 83 -----------------------------EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPL 133 (257)
T ss_pred -----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 345567899999998632211 1236666666665544
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+ ....|...|...+.+++
T Consensus 134 ~~~~~~~~ii~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 172 (257)
T PRK09242 134 LKQHASSAIVNIGSVSGLTHVR----SGAPYGMTKAALLQMTR 172 (257)
T ss_pred HHhcCCceEEEECccccCCCCC----CCcchHHHHHHHHHHHH
Confidence 456668999999987765322 23346666766665555
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=107.43 Aligned_cols=139 Identities=17% Similarity=0.187 Sum_probs=93.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+|+||++++++|+++|++|++++|+++++.... ..++..+.+|+++++++.++++.+
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 81 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV------- 81 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH-------
Confidence 47999999999999999999999999999999876543211 124667788888888777766432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehh----hHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSE----GMKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~----~~~~ll~~ 138 (189)
.+.++++|++|+++|.....+. .++|.. .++.+++.
T Consensus 82 -----------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 132 (265)
T PRK07062 82 -----------------------------EARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPL 132 (265)
T ss_pred -----------------------------HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3445678999999886432211 123333 35566677
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+++.+.+++|++||..+....+ ....|...|.....+.
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~~----~~~~y~asKaal~~~~ 170 (265)
T PRK07062 133 LRASAAASIVCVNSLLALQPEP----HMVATSAARAGLLNLV 170 (265)
T ss_pred HhccCCcEEEEeccccccCCCC----CchHhHHHHHHHHHHH
Confidence 7776668999999987654222 2234555565554433
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.4e-13 Score=105.60 Aligned_cols=140 Identities=10% Similarity=-0.045 Sum_probs=93.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+|+||++++++|+++|++|++++|++....... ..++.++.+|+++++++..+++..
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~------- 75 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV------- 75 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH-------
Confidence 47999999999999999999999999999999865443221 134677778888777776666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHH----HHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNI----VTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~l----l~~ 138 (189)
.+.+++.|++|+++|.....+ ..++|+.++.++ ++.
T Consensus 76 -----------------------------~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (259)
T PRK12384 76 -----------------------------DEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRL 126 (259)
T ss_pred -----------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 233456889999988544221 123677775544 444
Q ss_pred HHHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+ .+++|++||..+.... .....|..+|.+.+.+.+
T Consensus 127 l~~~~~~~~iv~~ss~~~~~~~----~~~~~Y~~sKaa~~~l~~ 166 (259)
T PRK12384 127 MIRDGIQGRIIQINSKSGKVGS----KHNSGYSAAKFGGVGLTQ 166 (259)
T ss_pred HHhCCCCcEEEEecCcccccCC----CCCchhHHHHHHHHHHHH
Confidence 44555 4699999997654321 223356777776654443
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=106.67 Aligned_cols=140 Identities=14% Similarity=0.020 Sum_probs=96.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC---cccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP---SEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||++++++|+++|++|++++|++.... .....++..+.+|+++++++.+.++..
T Consensus 16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------------ 83 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV------------ 83 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH------------
Confidence 57999999999999999999999999999999764321 111234567888888888777766533
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH----HCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK----EYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~----~~~ 143 (189)
.+.+.+.|++|+++|.....+ ..++|..+..++++++. +.+
T Consensus 84 ------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (255)
T PRK06841 84 ------------------------ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG 139 (255)
T ss_pred ------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC
Confidence 233456788999888653221 12367777777666654 445
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+....+ ....|...|...+.+.+
T Consensus 140 ~~~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 173 (255)
T PRK06841 140 GGKIVNLASQAGVVALE----RHVAYCASKAGVVGMTK 173 (255)
T ss_pred CceEEEEcchhhccCCC----CCchHHHHHHHHHHHHH
Confidence 67999999987654322 23346667766655544
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-13 Score=104.09 Aligned_cols=140 Identities=11% Similarity=0.052 Sum_probs=94.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc-c--cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS-E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~-~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+++||||+|+||++++++|+++|++|++++|++... .. . ...++.++.+|+++++++.+.++..
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----------- 74 (248)
T TIGR01832 6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSA----------- 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH-----------
Confidence 6899999999999999999999999999999864211 11 0 1245678888888888877766542
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH----HC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK----EY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~----~~ 142 (189)
.+..+++|++|+++|....... .++|..+..++++++. +.
T Consensus 75 -------------------------~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (248)
T TIGR01832 75 -------------------------VEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQ 129 (248)
T ss_pred -------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 2334567888888876432211 2366666666665553 44
Q ss_pred C-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .+++|++||..++...+ ....|...|...+.+.+
T Consensus 130 ~~~g~iv~~sS~~~~~~~~----~~~~Y~~sKaa~~~~~~ 165 (248)
T TIGR01832 130 GRGGKIINIASMLSFQGGI----RVPSYTASKHGVAGLTK 165 (248)
T ss_pred CCCeEEEEEecHHhccCCC----CCchhHHHHHHHHHHHH
Confidence 4 56999999987664322 22346777777766555
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-13 Score=104.50 Aligned_cols=140 Identities=15% Similarity=0.067 Sum_probs=95.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-ccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+|+||++++++|+++|++|++++|+++.... ....++.++.+|+++++++++.++..
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------------- 68 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDEL-------------- 68 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHH--------------
Confidence 589999999999999999999999999999998654322 11234678889999988888777543
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHH----HHHHHHHHCC--
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMK----NIVTAMKEYN-- 143 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~----~ll~~~~~~~-- 143 (189)
.+.+++.|++|+++|....... ..+|+.+.. .+++.+++.+
T Consensus 69 ----------------------~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~ 126 (236)
T PRK06483 69 ----------------------KQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHA 126 (236)
T ss_pred ----------------------HhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCC
Confidence 2334567888888875322211 124555544 4445555544
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|...+.+.+
T Consensus 127 ~g~iv~~ss~~~~~~~----~~~~~Y~asKaal~~l~~ 160 (236)
T PRK06483 127 ASDIIHITDYVVEKGS----DKHIAYAASKAALDNMTL 160 (236)
T ss_pred CceEEEEcchhhccCC----CCCccHHHHHHHHHHHHH
Confidence 4689999887654321 223457777877776665
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.4e-13 Score=110.54 Aligned_cols=149 Identities=29% Similarity=0.331 Sum_probs=101.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-----CceeEEeccccChhH-HHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-----SKVEIIQGDVLKLAD-VKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~ 74 (189)
|++|+|+||||.+|+.+++.|+++|+.|+++.|+.++.....+ ...+.+..+...+.+ +....+..
T Consensus 79 ~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~-------- 150 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAV-------- 150 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhc--------
Confidence 4589999999999999999999999999999999887765432 223333333333222 11111111
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.....+++.++|..... .++.+...|++|++++|+.+|++|++++
T Consensus 151 -------------------------------~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv 199 (411)
T KOG1203|consen 151 -------------------------------PKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLV 199 (411)
T ss_pred -------------------------------cccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEE
Confidence 01123455555433222 4567999999999999999999999999
Q ss_pred ccceeecCCCCCCCCC---ccchhhHHHHHHHhhhcCCCCCC
Q psy3626 151 LSAFLFYEPSKVPPMF---HNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 151 SS~~~~~~~~~~p~~~---~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
||..+..- ...++.. ..+..+|..+++++++++++||+
T Consensus 200 ~si~~~~~-~~~~~~~~~~~~~~~~k~~~e~~~~~Sgl~yti 240 (411)
T KOG1203|consen 200 GSIGGTKF-NQPPNILLLNGLVLKAKLKAEKFLQDSGLPYTI 240 (411)
T ss_pred EeecCccc-CCCchhhhhhhhhhHHHHhHHHHHHhcCCCcEE
Confidence 87765421 1122222 23457788899999999999985
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.9e-13 Score=105.99 Aligned_cols=140 Identities=13% Similarity=0.062 Sum_probs=94.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|+++++++.++++..
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 73 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV--------- 73 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999986544322 1235667888888888877766543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~~ 140 (189)
.+.++++|++|+++|.....+. .++|..++.. +++.++
T Consensus 74 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (256)
T PRK08643 74 ---------------------------VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFK 126 (256)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 2334567888888875432211 2255655444 444444
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||..+....+ ....|...|...+.+.+
T Consensus 127 ~~~~~~~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 164 (256)
T PRK08643 127 KLGHGGKIINATSQAGVVGNP----ELAVYSSTKFAVRGLTQ 164 (256)
T ss_pred hcCCCCEEEEECccccccCCC----CCchhHHHHHHHHHHHH
Confidence 443 36899999987654322 23457777776665544
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.4e-13 Score=105.46 Aligned_cols=139 Identities=17% Similarity=0.059 Sum_probs=93.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc----cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++++||||+|+||+.++++|+++|++|++++|+++....+ ...++.++.+|+.+++++.++++..
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----------- 71 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANA----------- 71 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH-----------
Confidence 5799999999999999999999999999999986554321 1235677888888888877766542
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~ 142 (189)
.+.++++|++|+++|....... ..+|..+..++++.+ .+.
T Consensus 72 -------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 126 (257)
T PRK07074 72 -------------------------AAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR 126 (257)
T ss_pred -------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 2233457888888875432211 125666665555555 556
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++|++||..+... . ....|...|...+.+.+
T Consensus 127 ~~~~iv~~sS~~~~~~-~----~~~~y~~sK~a~~~~~~ 160 (257)
T PRK07074 127 SRGAVVNIGSVNGMAA-L----GHPAYSAAKAGLIHYTK 160 (257)
T ss_pred CCeEEEEEcchhhcCC-C----CCcccHHHHHHHHHHHH
Confidence 6679999999754321 1 12246666666655544
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-13 Score=107.55 Aligned_cols=138 Identities=19% Similarity=0.076 Sum_probs=94.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+ +..... ...++.++.+|++++++++++++.+
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 76 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI--------- 76 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH---------
Confidence 689999999999999999999999999999998 433221 1235778888888888887776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-CC-----------cceehhhH----HHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-SP-----------TTVMSEGM----KNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~~-----------~~~~~~~~----~~ll~~~ 139 (189)
.+.+++.|++|+++|..... .. ..+|..+. +.+++.+
T Consensus 77 ---------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 129 (272)
T PRK08589 77 ---------------------------KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLM 129 (272)
T ss_pred ---------------------------HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34456789999998864321 11 11344443 4556666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ +++|++||..+....+ ....|..+|...+.+.+
T Consensus 130 ~~~~-g~iv~isS~~~~~~~~----~~~~Y~asKaal~~l~~ 166 (272)
T PRK08589 130 MEQG-GSIINTSSFSGQAADL----YRSGYNAAKGAVINFTK 166 (272)
T ss_pred HHcC-CEEEEeCchhhcCCCC----CCchHHHHHHHHHHHHH
Confidence 6665 7999999987654221 22346666766665554
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.9e-13 Score=105.89 Aligned_cols=140 Identities=16% Similarity=0.083 Sum_probs=95.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++++|+++|++|++++|+++..... ...++.++.+|++++++++.+++.+
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~--------- 78 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQT--------- 78 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987544321 1235677778888877777666543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHH----HHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKN----IVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~----ll~~~ 139 (189)
.+.+++.|++|+++|...... ...+|..+... +++.+
T Consensus 79 ---------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 131 (253)
T PRK06172 79 ---------------------------IAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLM 131 (253)
T ss_pred ---------------------------HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 233456788998888542211 01256666544 44455
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+.+++|++||..+.... +....|...|...+.+.+
T Consensus 132 ~~~~~~~ii~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~ 169 (253)
T PRK06172 132 LAQGGGAIVNTASVAGLGAA----PKMSIYAASKHAVIGLTK 169 (253)
T ss_pred HhcCCcEEEEECchhhccCC----CCCchhHHHHHHHHHHHH
Confidence 55666799999998766532 223456777777665554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.1e-13 Score=104.80 Aligned_cols=141 Identities=13% Similarity=0.003 Sum_probs=96.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|+++++++.++++.+
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 82 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARI-------- 82 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH--------
Confidence 36899999999999999999999999999999986543321 1234678888888888877777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHH----HHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIV----TAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll----~~~ 139 (189)
.+.+++.|++|+++|.....+. .++|+.+..++. +.+
T Consensus 83 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 134 (256)
T PRK06124 83 ----------------------------DAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRM 134 (256)
T ss_pred ----------------------------HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2334567888888886432211 235556555555 555
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+.+++|++||..+....+ ....|...|...+.+.+
T Consensus 135 ~~~~~~~iv~~ss~~~~~~~~----~~~~Y~~sK~a~~~~~~ 172 (256)
T PRK06124 135 KRQGYGRIIAITSIAGQVARA----GDAVYPAAKQGLTGLMR 172 (256)
T ss_pred HhcCCcEEEEEeechhccCCC----CccHhHHHHHHHHHHHH
Confidence 556778999999987654322 23356666666655544
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.1e-13 Score=102.62 Aligned_cols=140 Identities=19% Similarity=0.135 Sum_probs=91.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc----c--cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS----E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~----~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|++|++++++|+++|++|+++.|++... .. . .+.++.++.+|+++++++.++++..
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 77 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEA-------- 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH--------
Confidence 6899999999999999999999999998888875421 11 0 1234566777777777766655432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~--- 140 (189)
.+.+.++|++|+++|....... ...|+.++.++++++.
T Consensus 78 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 129 (248)
T PRK05557 78 ----------------------------KAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPM 129 (248)
T ss_pred ----------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2233467888888876443211 1256667666666664
Q ss_pred -HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++++++||.......+ ....|...|...+.+++
T Consensus 130 ~~~~~~~~v~iss~~~~~~~~----~~~~y~~sk~a~~~~~~ 167 (248)
T PRK05557 130 MKQRSGRIINISSVVGLMGNP----GQANYAASKAGVIGFTK 167 (248)
T ss_pred HhcCCeEEEEEcccccCcCCC----CCchhHHHHHHHHHHHH
Confidence 44567899999986554322 23346666665554443
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.2e-13 Score=101.30 Aligned_cols=133 Identities=13% Similarity=0.090 Sum_probs=91.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|++|++++++|+++|++|+++.|++... ....++.+|+++++++++.++..
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~--------------- 63 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----FPGELFACDLADIEQTAATLAQI--------------- 63 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----cCceEEEeeCCCHHHHHHHHHHH---------------
Confidence 6899999999999999999999999999999987542 12257889999988887776532
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
.+. .++|++|+++|.....+. ...|..+ ++.+++.+++.+.++
T Consensus 64 ---------------------~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 121 (234)
T PRK07577 64 ---------------------NEI-HPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGR 121 (234)
T ss_pred ---------------------HHh-CCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence 111 146778887775433211 1234444 445566667777789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||...+.. +....|...|...+.+.+
T Consensus 122 iv~~sS~~~~~~-----~~~~~Y~~sK~a~~~~~~ 151 (234)
T PRK07577 122 IVNICSRAIFGA-----LDRTSYSAAKSALVGCTR 151 (234)
T ss_pred EEEEccccccCC-----CCchHHHHHHHHHHHHHH
Confidence 999999865432 123356767766655544
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=103.92 Aligned_cols=137 Identities=20% Similarity=0.104 Sum_probs=91.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|++|++++++|+++|++|++++|++++..... ..++.++.+|+.+++++.+.++..
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~---------- 76 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAI---------- 76 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHH----------
Confidence 57999999999999999999999999999999875443221 145667778888877776666532
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHH---C
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKE---Y 142 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~---~ 142 (189)
.+.++++|++|+++|...... ..++|+.+..++++++.+ .
T Consensus 77 --------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 130 (237)
T PRK07326 77 --------------------------VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR 130 (237)
T ss_pred --------------------------HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 233456788888887643221 123566666666665543 3
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHH
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYN 178 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~ 178 (189)
+.+++|++||..+.... .....|...|...+.
T Consensus 131 ~~~~iv~~ss~~~~~~~----~~~~~y~~sk~a~~~ 162 (237)
T PRK07326 131 GGGYIINISSLAGTNFF----AGGAAYNASKFGLVG 162 (237)
T ss_pred CCeEEEEECChhhccCC----CCCchHHHHHHHHHH
Confidence 45789999987654321 123345556654443
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=105.22 Aligned_cols=140 Identities=16% Similarity=0.054 Sum_probs=94.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++.+|+++..... ...++.++.+|+++++++++.++..
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 80 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHI--------- 80 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986544321 1234567778888888777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHH----HH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTA----MK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~----~~ 140 (189)
.+.+++.|++|+++|.....+ ..++|+.+..++++. +.
T Consensus 81 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (254)
T PRK08085 81 ---------------------------EKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMV 133 (254)
T ss_pred ---------------------------HHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 233456788888887543211 123566665454444 44
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+.... .....|...|...+.+.+
T Consensus 134 ~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 170 (254)
T PRK08085 134 KRQAGKIINICSMQSELGR----DTITPYAASKGAVKMLTR 170 (254)
T ss_pred HcCCcEEEEEccchhccCC----CCCcchHHHHHHHHHHHH
Confidence 4556799999997654322 223457777777766655
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-13 Score=106.61 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=94.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++|||++|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 80 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA------- 80 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH-------
Confidence 68999999999999999999999999999999865432210 135667777777777766666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------C------CcceehhhHHHHHHHHH-
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------S------PTTVMSEGMKNIVTAMK- 140 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~------~~~~~~~~~~~ll~~~~- 140 (189)
.+.++++|++|+++|..... . ..++|..+..++++++.
T Consensus 81 -----------------------------~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 81 -----------------------------TAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred -----------------------------HHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 22234678888888753211 0 12356667666665543
Q ss_pred ---HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 ---EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ---~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++++++||..+.... +....|...|...+.+++
T Consensus 132 ~~~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 171 (276)
T PRK05875 132 ELVRGGGGSFVGISSIAASNTH----RWFGAYGVTKSAVDHLMK 171 (276)
T ss_pred HHHhcCCcEEEEEechhhcCCC----CCCcchHHHHHHHHHHHH
Confidence 3445699999998765432 224567777877776665
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-13 Score=104.94 Aligned_cols=140 Identities=13% Similarity=0.052 Sum_probs=97.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|++|++++++|+++|++|++++|+.+....+ ...++.++.+|++++++++++++..
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 74 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAA------------ 74 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH------------
Confidence 3799999999999999999999999999999987654332 1235778888998888887776543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHH----CC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKE----YN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~----~~ 143 (189)
.+.++++|++||++|.....+ ..++|+.+..++++++.. .+
T Consensus 75 ------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (257)
T PRK07067 75 ------------------------VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQG 130 (257)
T ss_pred ------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcC
Confidence 233456788888887543211 124777788777777643 22
Q ss_pred -ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 -VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 -~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||....... +....|..+|...+.+.+
T Consensus 131 ~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (257)
T PRK07067 131 RGGKIINMASQAGRRGE----ALVSHYCATKAAVISYTQ 165 (257)
T ss_pred CCcEEEEeCCHHhCCCC----CCCchhhhhHHHHHHHHH
Confidence 3589999997654322 233456666766655544
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=1e-12 Score=101.52 Aligned_cols=137 Identities=16% Similarity=0.065 Sum_probs=95.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|++|+.++++|+++|++|++++|++ . .....++.++++|+++++++++.++..
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~-~~~~~~~~~~~~D~~~~~~~~~~~~~~--------------- 70 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--L-TQEDYPFATFVLDVSDAAAVAQVCQRL--------------- 70 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--h-hhcCCceEEEEecCCCHHHHHHHHHHH---------------
Confidence 5899999999999999999999999999999986 1 112356788899999998888877543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~~~ 146 (189)
.+.+++.|++|+++|.....+. .++|..+..++++++ ++.+.++
T Consensus 71 ---------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ 129 (252)
T PRK08220 71 ---------------------LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGA 129 (252)
T ss_pred ---------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCE
Confidence 3344567888888775432211 235666655555554 4555679
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+.... .....|...|...+.+.+
T Consensus 130 iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~ 160 (252)
T PRK08220 130 IVTVGSNAAHVPR----IGMAAYGASKAALTSLAK 160 (252)
T ss_pred EEEECCchhccCC----CCCchhHHHHHHHHHHHH
Confidence 9999997654321 223456667776665554
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.8e-13 Score=105.09 Aligned_cols=140 Identities=10% Similarity=0.068 Sum_probs=95.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc-c--cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS-E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~-~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+++||||+++||++++++|+++|++|+++.|+.... .. . ...++.++.+|++++++++++++..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----------- 77 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQA----------- 77 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHH-----------
Confidence 5799999999999999999999999999988864211 11 0 1245677888888888887777543
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHH----HHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVT----AMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~----~~~~~ 142 (189)
.+.+++.|++|+++|.....+ ..++|+.+...+.+ .+.+.
T Consensus 78 -------------------------~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12481 78 -------------------------VEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ 132 (251)
T ss_pred -------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc
Confidence 344567889999988643221 12467766554444 44444
Q ss_pred C-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .+++|++||..++...+. ...|..+|...+.+.+
T Consensus 133 ~~~g~ii~isS~~~~~~~~~----~~~Y~asK~a~~~l~~ 168 (251)
T PRK12481 133 GNGGKIINIASMLSFQGGIR----VPSYTASKSAVMGLTR 168 (251)
T ss_pred CCCCEEEEeCChhhcCCCCC----CcchHHHHHHHHHHHH
Confidence 3 469999999877653222 2356777777765554
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-13 Score=104.09 Aligned_cols=139 Identities=22% Similarity=0.131 Sum_probs=91.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++++|+++|++|++++|+++..... ...++.++.+|+++++++.++++..
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 78 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQL--------- 78 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHH---------
Confidence 4799999999999999999999999999999986543321 1234566677777776666655432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK---- 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~---- 140 (189)
.+.++++|++|+++|...... ..++|+.++.++++++.
T Consensus 79 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 131 (239)
T PRK07666 79 ---------------------------KNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMI 131 (239)
T ss_pred ---------------------------HHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 223346788888887643211 12356666666655553
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+.+.+++|++||..+....+ ....|...|...+.++
T Consensus 132 ~~~~~~iv~~ss~~~~~~~~----~~~~Y~~sK~a~~~~~ 167 (239)
T PRK07666 132 ERQSGDIINISSTAGQKGAA----VTSAYSASKFGVLGLT 167 (239)
T ss_pred hCCCcEEEEEcchhhccCCC----CCcchHHHHHHHHHHH
Confidence 55678999999987665322 2234555665554443
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.3e-13 Score=105.36 Aligned_cols=140 Identities=13% Similarity=0.015 Sum_probs=96.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++++|+++|++|+++.|+++..... ...++.++.+|++++++++.+++..
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 81 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQI--------- 81 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH---------
Confidence 6799999999999999999999999999999887554322 1235777888888888877776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHH----HHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMK----NIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~----~ll~~~~ 140 (189)
.+.+++.|++|+++|.....+. ..+|..+.. .+++.++
T Consensus 82 ---------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (265)
T PRK07097 82 ---------------------------EKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMI 134 (265)
T ss_pred ---------------------------HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 2334568899999886543211 125555544 4455555
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+.... .....|...|...+.+.+
T Consensus 135 ~~~~g~iv~isS~~~~~~~----~~~~~Y~~sKaal~~l~~ 171 (265)
T PRK07097 135 KKGHGKIINICSMMSELGR----ETVSAYAAAKGGLKMLTK 171 (265)
T ss_pred hcCCcEEEEEcCccccCCC----CCCccHHHHHHHHHHHHH
Confidence 6667899999997654322 223457777776665555
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.8e-13 Score=103.70 Aligned_cols=140 Identities=19% Similarity=0.172 Sum_probs=96.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|++|++++++|+++|++|++++|+++...+. ...++.++++|+++++++...++.
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------------- 73 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQA------------- 73 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH-------------
Confidence 5899999999999999999999999999999975443322 123566778888887776655533
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHH--CCcc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKE--YNVS 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~--~~~~ 145 (189)
+.+.++++|++|+++|.....+ ..++|+.++.++++++.. ...+
T Consensus 74 -----------------------~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 130 (249)
T PRK06500 74 -----------------------LAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPA 130 (249)
T ss_pred -----------------------HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 2334456889999888643221 134778888888888864 2235
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..+.... +....|...|...+.+.+
T Consensus 131 ~~i~~~S~~~~~~~----~~~~~Y~~sK~a~~~~~~ 162 (249)
T PRK06500 131 SIVLNGSINAHIGM----PNSSVYAASKAALLSLAK 162 (249)
T ss_pred EEEEEechHhccCC----CCccHHHHHHHHHHHHHH
Confidence 78888886654322 223457777777766664
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.2e-13 Score=102.99 Aligned_cols=140 Identities=13% Similarity=0.065 Sum_probs=95.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Ccc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|++|++++++|+++|++|++++|+.... ... ...++.++.+|+++++++.++++..
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAA-------- 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH--------
Confidence 5799999999999999999999999999999874321 110 1245677888888887777766543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--C-----------CcceehhhHHHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--S-----------PTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~-----------~~~~~~~~~~~ll~~~~~ 141 (189)
.+..+++|++||++|..... + ..++|+.++.++++++..
T Consensus 75 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (256)
T PRK12745 75 ----------------------------QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAK 126 (256)
T ss_pred ----------------------------HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHH
Confidence 23345678888888753211 0 134778887777666532
Q ss_pred ----CC------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 ----YN------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ----~~------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.. .+++|++||..+.... .....|...|...+.+.+
T Consensus 127 ~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 172 (256)
T PRK12745 127 RMLAQPEPEELPHRSIVFVSSVNAIMVS----PNRGEYCISKAGLSMAAQ 172 (256)
T ss_pred HHHhccCcCCCCCcEEEEECChhhccCC----CCCcccHHHHHHHHHHHH
Confidence 21 4679999998765432 123357777777765554
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.8e-13 Score=106.08 Aligned_cols=142 Identities=18% Similarity=0.099 Sum_probs=95.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++.+|+++..+.. ...++.++.+|++++++++++++..
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 80 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQV--------- 80 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986554322 1234667778888888777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+.++++|++|+++|.....+. .++|+.+...+.+++ .
T Consensus 81 ---------------------------~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (253)
T PRK05867 81 ---------------------------TAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMV 133 (253)
T ss_pred ---------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 3445678999999886432211 136666655555544 3
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||..+... ..|.....|..+|...+.+.+
T Consensus 134 ~~~~~g~iv~~sS~~~~~~--~~~~~~~~Y~asKaal~~~~~ 173 (253)
T PRK05867 134 KQGQGGVIINTASMSGHII--NVPQQVSHYCASKAAVIHLTK 173 (253)
T ss_pred hcCCCcEEEEECcHHhcCC--CCCCCccchHHHHHHHHHHHH
Confidence 443 357899888765321 112233457777777776665
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.1e-13 Score=103.26 Aligned_cols=145 Identities=11% Similarity=0.044 Sum_probs=92.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
||+++||||+|++|++++++|+++|++|++++|++ +.+..+ ...++.++.+|+++++++++.++.+...+...
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~--- 77 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED--- 77 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc---
Confidence 88999999999999999999999999999999986 222221 23467788999999988888776542100000
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------Ccceehhh----HHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEG----MKNIVTAMK 140 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~----~~~ll~~~~ 140 (189)
-.....+|+++|...+.. ..++|..+ ++++++.++
T Consensus 78 -----------------------------~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (251)
T PRK06924 78 -----------------------------NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTK 128 (251)
T ss_pred -----------------------------cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHh
Confidence 000114556655432210 12245554 555666666
Q ss_pred HC-CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EY-NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~-~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+. +.+++|++||..+... .+....|...|...+.+.+
T Consensus 129 ~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sKaa~~~~~~ 166 (251)
T PRK06924 129 DWKVDKRVINISSGAAKNP----YFGWSAYCSSKAGLDMFTQ 166 (251)
T ss_pred ccCCCceEEEecchhhcCC----CCCcHHHhHHHHHHHHHHH
Confidence 54 3568999999765432 1224457777777766654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.4e-13 Score=102.61 Aligned_cols=135 Identities=18% Similarity=0.081 Sum_probs=90.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCC-CCcc-------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQR-LPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~-~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
++++||||+|++|++++++|+++| ++|++++|+++. +..+ ...+++++.+|+++++++++.++..
T Consensus 9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~------ 82 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAA------ 82 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHH------
Confidence 579999999999999999999995 999999998765 3211 1125677788888777766555422
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhH----HHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGM----KNIVT 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~----~~ll~ 137 (189)
.+ .++.|++|+++|...... ..++|+.+. +.+++
T Consensus 83 ------------------------------~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~ 131 (253)
T PRK07904 83 ------------------------------FA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGE 131 (253)
T ss_pred ------------------------------Hh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHH
Confidence 11 135788888777643210 023455443 45788
Q ss_pred HHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHH
Q psy3626 138 AMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMY 177 (189)
Q Consensus 138 ~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~ 177 (189)
.+++.+.+++|++||..+.... .....|..+|....
T Consensus 132 ~~~~~~~~~iv~isS~~g~~~~----~~~~~Y~~sKaa~~ 167 (253)
T PRK07904 132 KMRAQGFGQIIAMSSVAGERVR----RSNFVYGSTKAGLD 167 (253)
T ss_pred HHHhcCCceEEEEechhhcCCC----CCCcchHHHHHHHH
Confidence 8888888899999998764321 12234566665554
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-13 Score=105.07 Aligned_cols=141 Identities=14% Similarity=0.133 Sum_probs=95.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
.|+++||||+|++|++++++|+++|++|++++|+++..... ...++.++.+|+++++++.++++..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 72 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI-------- 72 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH--------
Confidence 47899999999999999999999999999999986544322 1235667788888887777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~--- 140 (189)
.+.+++.|++|+++|.....+ ..++|..+..++++++.
T Consensus 73 ----------------------------~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 124 (252)
T PRK07677 73 ----------------------------DEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYW 124 (252)
T ss_pred ----------------------------HHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 334456788998887532211 12466677666666663
Q ss_pred -HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||..+....+ ....|..+|...+.+.+
T Consensus 125 ~~~~~~g~ii~isS~~~~~~~~----~~~~Y~~sKaa~~~~~~ 163 (252)
T PRK07677 125 IEKGIKGNIINMVATYAWDAGP----GVIHSAAAKAGVLAMTR 163 (252)
T ss_pred HhcCCCEEEEEEcChhhccCCC----CCcchHHHHHHHHHHHH
Confidence 332 46899999887643221 22346667766665544
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.3e-13 Score=108.17 Aligned_cols=138 Identities=16% Similarity=0.082 Sum_probs=94.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+++.+.+. ...++.++.+|++++++++++++.+
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~--------- 78 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQA--------- 78 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH---------
Confidence 4799999999999999999999999999999987655432 1234667778888887777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~~ 140 (189)
.+..+++|++|+++|....... .++|..++.+ +++.++
T Consensus 79 ---------------------------~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~ 131 (330)
T PRK06139 79 ---------------------------ASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFK 131 (330)
T ss_pred ---------------------------HHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 2334678999999885433211 2356666544 455556
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
+.+.+++|++||..++...+ ....|..+|.....+
T Consensus 132 ~~~~g~iV~isS~~~~~~~p----~~~~Y~asKaal~~~ 166 (330)
T PRK06139 132 KQGHGIFINMISLGGFAAQP----YAAAYSASKFGLRGF 166 (330)
T ss_pred HcCCCEEEEEcChhhcCCCC----CchhHHHHHHHHHHH
Confidence 66667999999987654322 233566666654433
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.9e-13 Score=105.18 Aligned_cols=140 Identities=15% Similarity=0.091 Sum_probs=95.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC--Ccc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL--PSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++..++.+.. ... ...++.++.+|++++++++++++..
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~------- 128 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERA------- 128 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHH-------
Confidence 6899999999999999999999999998877654321 110 1234556777777777776666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~ 141 (189)
.+.++++|++|+++|...... ..++|+.++.++++++..
T Consensus 129 -----------------------------~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 179 (300)
T PRK06128 129 -----------------------------VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP 179 (300)
T ss_pred -----------------------------HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 344567899999998642211 134788888888888764
Q ss_pred C--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 Y--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. ..+++|++||..++...+ ....|..+|...+.+.+
T Consensus 180 ~~~~~~~iv~~sS~~~~~~~~----~~~~Y~asK~a~~~~~~ 217 (300)
T PRK06128 180 HLPPGASIINTGSIQSYQPSP----TLLDYASTKAAIVAFTK 217 (300)
T ss_pred hcCcCCEEEEECCccccCCCC----CchhHHHHHHHHHHHHH
Confidence 2 235999999988765322 23346777777665554
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3e-13 Score=105.41 Aligned_cols=139 Identities=22% Similarity=0.210 Sum_probs=95.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||++++++|+++|++|++++|+++..+.+ ...++.++.+|++++++++++++..
T Consensus 7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 74 (263)
T PRK06200 7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT------------ 74 (263)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH------------
Confidence 5899999999999999999999999999999986554432 1235677888888888877776543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------C----------CcceehhhHHHHHHHH---
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------S----------PTTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~----------~~~~~~~~~~~ll~~~--- 139 (189)
.+.++++|++|+++|..... . ..++|+.+...+++.+
T Consensus 75 ------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 130 (263)
T PRK06200 75 ------------------------VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPA 130 (263)
T ss_pred ------------------------HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHH
Confidence 23345678888888853211 1 1246666655555544
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ +++|++||..++...+ ....|..+|...+.+.+
T Consensus 131 ~~~~~-g~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 168 (263)
T PRK06200 131 LKASG-GSMIFTLSNSSFYPGG----GGPLYTASKHAVVGLVR 168 (263)
T ss_pred HHhcC-CEEEEECChhhcCCCC----CCchhHHHHHHHHHHHH
Confidence 3433 6899999987654321 22346777777766655
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=99.81 Aligned_cols=142 Identities=15% Similarity=0.087 Sum_probs=93.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|++++||||+|++|++++++|+++|++|++++|++...... ...++.++.+|++++++++++++...
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~------------ 68 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQ------------ 68 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhh------------
Confidence 78999999999999999999999999999999997665432 12356778889988888777665321
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------------CCcceehhhHHHHHHHHHH---CC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------------SPTTVMSEGMKNIVTAMKE---YN 143 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------------~~~~~~~~~~~~ll~~~~~---~~ 143 (189)
-+++|++|+++|..... ....+|..+...+.+.+.. .+
T Consensus 69 --------------------------~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 122 (225)
T PRK08177 69 --------------------------GQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG 122 (225)
T ss_pred --------------------------cCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc
Confidence 01356677776653211 0123566666666555532 23
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++++++||..+....+ ....+..|..+|...+.+.+
T Consensus 123 ~~~iv~~ss~~g~~~~~-~~~~~~~Y~~sK~a~~~~~~ 159 (225)
T PRK08177 123 QGVLAFMSSQLGSVELP-DGGEMPLYKASKAALNSMTR 159 (225)
T ss_pred CCEEEEEccCccccccC-CCCCccchHHHHHHHHHHHH
Confidence 35788888865443211 11233457777777776665
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.8e-13 Score=103.60 Aligned_cols=136 Identities=21% Similarity=0.234 Sum_probs=97.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+|+||||++|++++++|+++|++|.+..|+++...... ..+++...|+.++.++...+++.+.++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~----------- 68 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVL----------- 68 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEE-----------
Confidence 57999999999999999999999999999999998887665 677788888888877777777665544
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHC--CccEEEEeccceeecCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEY--NVSVVSVCLSAFLFYEP 159 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~--~~~~~i~iSS~~~~~~~ 159 (189)
...+... ... ........++++.+++. ++++++++|......
T Consensus 69 --------------------------------~i~~~~~-~~~-~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~-- 112 (275)
T COG0702 69 --------------------------------LISGLLD-GSD-AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA-- 112 (275)
T ss_pred --------------------------------EEecccc-ccc-chhHHHHHHHHHHHHHhcCCceEEEEeccCCCCC--
Confidence 3333222 111 11223344455555554 467888877766432
Q ss_pred CCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 160 SKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 160 ~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
.....+...+...|..+.+++++||+
T Consensus 113 ----~~~~~~~~~~~~~e~~l~~sg~~~t~ 138 (275)
T COG0702 113 ----ASPSALARAKAAVEAALRSSGIPYTT 138 (275)
T ss_pred ----CCccHHHHHHHHHHHHHHhcCCCeEE
Confidence 22234788899999999999999873
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-13 Score=104.66 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=96.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.+
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 78 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAA--------- 78 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999886544321 1235677888888888877766543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+.++++|++|+++|....... ...|..+..++++++ .
T Consensus 79 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 131 (250)
T PRK12939 79 ---------------------------AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLR 131 (250)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 2233568899999886432211 225666666666655 3
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+....+ ....|...|...+.+.+
T Consensus 132 ~~~~g~iv~isS~~~~~~~~----~~~~y~~sK~~~~~~~~ 168 (250)
T PRK12939 132 DSGRGRIVNLASDTALWGAP----KLGAYVASKGAVIGMTR 168 (250)
T ss_pred HcCCeEEEEECchhhccCCC----CcchHHHHHHHHHHHHH
Confidence 44456999999977654322 23346666776666554
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.3e-13 Score=102.48 Aligned_cols=140 Identities=9% Similarity=-0.046 Sum_probs=97.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+.+..... ...++.++.+|++++++++++++..
T Consensus 12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~--------- 82 (255)
T PRK06113 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFA--------- 82 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999876543321 1235667788888888877766543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhHHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGMKNIVTAMK----E 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~~~ll~~~~----~ 141 (189)
.+.+++.|++|+++|....... .++|+.+..++++.+. +
T Consensus 83 ---------------------------~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (255)
T PRK06113 83 ---------------------------LSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK 135 (255)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 2334567888888875332110 2467777777777664 4
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+.... .....|...|...+.+++
T Consensus 136 ~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 171 (255)
T PRK06113 136 NGGGVILTITSMAAENKN----INMTSYASSKAAASHLVR 171 (255)
T ss_pred cCCcEEEEEecccccCCC----CCcchhHHHHHHHHHHHH
Confidence 445699999998765422 123357777777766665
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.5e-12 Score=102.31 Aligned_cols=142 Identities=15% Similarity=0.059 Sum_probs=93.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------------cCCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------------YHSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------------~~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
++++||||+|++|++++++|+++|++|++++|+.+....+ ...++.++.+|+++++++.++++..
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~-- 84 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA-- 84 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH--
Confidence 5799999999999999999999999999999986532111 1123555666666666665555432
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~ 137 (189)
.+.+++.|++|+++|.....+. .++|+.++.++++
T Consensus 85 ----------------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 130 (273)
T PRK08278 85 ----------------------------------VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQ 130 (273)
T ss_pred ----------------------------------HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHH
Confidence 2233468889998886432211 2367777777766
Q ss_pred HHH----HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMK----EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~----~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++. +.+.++++++||...... ...+....|..+|...+.+.+
T Consensus 131 ~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~~~Y~~sK~a~~~~~~ 176 (273)
T PRK08278 131 ACLPHLKKSENPHILTLSPPLNLDP--KWFAPHTAYTMAKYGMSLCTL 176 (273)
T ss_pred HHHHHHHhcCCCEEEEECCchhccc--cccCCcchhHHHHHHHHHHHH
Confidence 664 344468998888654321 112344567888888877665
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-12 Score=101.57 Aligned_cols=140 Identities=11% Similarity=0.023 Sum_probs=95.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc---c--cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS---E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|++|++++++|+++|++|++++|+++.... + ...++.++.+|++++++++++++..
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------- 77 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQT---------- 77 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH----------
Confidence 589999999999999999999999999999998765411 0 1345778888888888877776542
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhHHHHHHHHHH---CC
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGMKNIVTAMKE---YN 143 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~~~ll~~~~~---~~ 143 (189)
.+.++++|++|+++|....... .+.|+.+..++.+.+.. .+
T Consensus 78 --------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (258)
T PRK08628 78 --------------------------VAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS 131 (258)
T ss_pred --------------------------HHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc
Confidence 2334567888888875322111 23456665565555432 23
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++++++||..+.... .....|..+|...+.+.+
T Consensus 132 ~~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (258)
T PRK08628 132 RGAIVNISSKTALTGQ----GGTSGYAAAKGAQLALTR 165 (258)
T ss_pred CcEEEEECCHHhccCC----CCCchhHHHHHHHHHHHH
Confidence 4789999998776432 223457777777766655
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.9e-13 Score=98.31 Aligned_cols=140 Identities=16% Similarity=0.066 Sum_probs=100.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecC--CCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRD--PQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~--~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||++.+|+.++++|+++ ++.|+++.|+ .+...++ ...++.++++|++++++++.+++..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~------ 74 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEV------ 74 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHH------
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccc------
Confidence 68999999999999999999999 5578888887 2222221 2356788888888888888877654
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~ 141 (189)
.+.....|++|+++|....... .++|..+...+.+++..
T Consensus 75 ------------------------------~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (167)
T PF00106_consen 75 ------------------------------IKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP 124 (167)
T ss_dssp ------------------------------HHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ------------------------------ccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee
Confidence 3556678999999997663322 23666666667776666
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+.... +....|...|..+..+.+
T Consensus 125 ~~~g~iv~~sS~~~~~~~----~~~~~Y~askaal~~~~~ 160 (167)
T PF00106_consen 125 QGGGKIVNISSIAGVRGS----PGMSAYSASKAALRGLTQ 160 (167)
T ss_dssp HTTEEEEEEEEGGGTSSS----TTBHHHHHHHHHHHHHHH
T ss_pred ccccceEEecchhhccCC----CCChhHHHHHHHHHHHHH
Confidence 556899999998876532 223356666777666554
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.1e-13 Score=103.00 Aligned_cols=139 Identities=17% Similarity=0.031 Sum_probs=92.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|++|++++++|+++|++|.++ .|+.+..... ....+.++.+|+++++++.++++..
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~-------- 78 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQL-------- 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHH--------
Confidence 589999999999999999999999999775 5654332211 1234667778888877777666543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHh------cCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI------EGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~ 137 (189)
.+.+ .++|++||++|....... .++|+.++.++++
T Consensus 79 ----------------------------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 130 (254)
T PRK12746 79 ----------------------------KNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQ 130 (254)
T ss_pred ----------------------------HHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 1111 257889998886433211 2368888888888
Q ss_pred HHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 138 AMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 138 ~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
.+.+. +.+++|++||..++... +....|...|...+.+.
T Consensus 131 ~~~~~~~~~~~~v~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~ 171 (254)
T PRK12746 131 QTLPLLRAEGRVINISSAEVRLGF----TGSIAYGLSKGALNTMT 171 (254)
T ss_pred HHHHHhhcCCEEEEECCHHhcCCC----CCCcchHhhHHHHHHHH
Confidence 77652 33689999998775422 22334666776666554
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.6e-13 Score=104.81 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=92.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+|+||++++++|+++|++|++++|+++...+.. ..++.++.+|++++++++++++.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~---------- 70 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEA---------- 70 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHH----------
Confidence 58999999999999999999999999999999865443211 135677888888888887776543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----C--C-------cceehhh----HHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----S--P-------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~--~-------~~~~~~~----~~~ll~~~ 139 (189)
.+.+++.|++|+++|..... . . ..+|..+ ++.+++.+
T Consensus 71 --------------------------~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 124 (259)
T PRK08340 71 --------------------------WELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAW 124 (259)
T ss_pred --------------------------HHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHH
Confidence 33456788899988853211 0 0 1133333 34445555
Q ss_pred H-HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 K-EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~-~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. +.+.++||++||..+... . +....|...|...+.+.+
T Consensus 125 ~~~~~~g~iv~isS~~~~~~---~-~~~~~y~~sKaa~~~~~~ 163 (259)
T PRK08340 125 LEKKMKGVLVYLSSVSVKEP---M-PPLVLADVTRAGLVQLAK 163 (259)
T ss_pred HhcCCCCEEEEEeCcccCCC---C-CCchHHHHHHHHHHHHHH
Confidence 4 344579999999876432 1 123346666766665554
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.7e-13 Score=106.71 Aligned_cols=143 Identities=13% Similarity=0.007 Sum_probs=94.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+++||++++++|+++|++|++.+|+.++..+. ...++.++.+|+.++++++++++..
T Consensus 15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~------- 87 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL------- 87 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH-------
Confidence 6899999999999999999999999999999986544321 0135677888888888877776542
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----------CcceehhhHH----HHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----------PTTVMSEGMK----NIVTAM 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----------~~~~~~~~~~----~ll~~~ 139 (189)
.+..+++|++|+++|...... ...+|..+.. .+++.+
T Consensus 88 -----------------------------~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l 138 (313)
T PRK05854 88 -----------------------------RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLL 138 (313)
T ss_pred -----------------------------HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHH
Confidence 233456899999988643211 1235666644 445555
Q ss_pred HHCCccEEEEeccceeecCCCCC--------CCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKV--------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~--------p~~~~~~~~~~~~~~~~l~ 181 (189)
++. .+++|++||.........+ ......|..+|.....+.+
T Consensus 139 ~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~ 187 (313)
T PRK05854 139 RAG-RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFAL 187 (313)
T ss_pred HhC-CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHH
Confidence 444 4689999998764321111 1123346666666554443
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=100.49 Aligned_cols=140 Identities=9% Similarity=-0.025 Sum_probs=93.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+|++|++++++|+++|++|++++|+... .... ....+.++.+|+++++++.++++..
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 79 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAAC------- 79 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHH-------
Confidence 579999999999999999999999999999986432 1110 1124667777777777776666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~ 142 (189)
.+.+.++|++|+++|.....+ ..++|+.++.++++++...
T Consensus 80 -----------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 80 -----------------------------VAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred -----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 223446788888887543211 1237888999999988532
Q ss_pred ---CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 ---NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ---~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+.++.+++..... ..++...|...|...+.+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~----~~~~~~~Y~~sK~~~~~~~~ 168 (249)
T PRK09135 131 LRKQRGAIVNITDIHAER----PLKGYPVYCAAKAALEMLTR 168 (249)
T ss_pred HhhCCeEEEEEeChhhcC----CCCCchhHHHHHHHHHHHHH
Confidence 234666666543211 12344568888888877775
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.7e-13 Score=108.05 Aligned_cols=119 Identities=17% Similarity=0.130 Sum_probs=82.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||.++++.|+++|++|++++|++++.... ...++.++.+|++++++++++++..
T Consensus 7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~--------- 77 (322)
T PRK07453 7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDF--------- 77 (322)
T ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986543221 1235677788888887777666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------------CCcceehhhHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------------SPTTVMSEGMKNIVTA----M 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------------~~~~~~~~~~~~ll~~----~ 139 (189)
.+...++|++|+++|..... ...++|..++.+++++ +
T Consensus 78 ---------------------------~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 130 (322)
T PRK07453 78 ---------------------------RALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDL 130 (322)
T ss_pred ---------------------------HHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 22234578999998853221 1124677776655554 4
Q ss_pred HHCC--ccEEEEeccceee
Q psy3626 140 KEYN--VSVVSVCLSAFLF 156 (189)
Q Consensus 140 ~~~~--~~~~i~iSS~~~~ 156 (189)
++.+ .+|||++||....
T Consensus 131 ~~~~~~~~riV~vsS~~~~ 149 (322)
T PRK07453 131 KKSPAPDPRLVILGTVTAN 149 (322)
T ss_pred HhCCCCCceEEEEcccccC
Confidence 4443 3599999997653
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.3e-13 Score=104.75 Aligned_cols=139 Identities=16% Similarity=0.114 Sum_probs=94.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+.+|++|++++|+++.+... ...++.++.+|++++++++++++.+
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~--------- 80 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQI--------- 80 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986544321 1234567788888888777776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHH---
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKE--- 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~--- 141 (189)
.+.++++|++|+++|...... ..++|+.++.++++++..
T Consensus 81 ---------------------------~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~ 133 (264)
T PRK07576 81 ---------------------------ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLR 133 (264)
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 223456788888887432211 123777887777766543
Q ss_pred -CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 -YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 -~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+ +++|++||..+.... +....|...|...+.+.+
T Consensus 134 ~~~-g~iv~iss~~~~~~~----~~~~~Y~asK~a~~~l~~ 169 (264)
T PRK07576 134 RPG-ASIIQISAPQAFVPM----PMQAHVCAAKAGVDMLTR 169 (264)
T ss_pred hCC-CEEEEECChhhccCC----CCccHHHHHHHHHHHHHH
Confidence 33 699999997664321 223346667776665555
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=103.62 Aligned_cols=140 Identities=15% Similarity=0.045 Sum_probs=94.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Ccc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||.+++++|+++|++|+++.|++... ... ...++.++.+|+++++++.++++..
T Consensus 47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i-------- 118 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEET-------- 118 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH--------
Confidence 6899999999999999999999999999998875321 111 1234567777777777766655432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHHC
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~~ 142 (189)
.+.+.++|++|+++|...... ..++|+.+..++++++...
T Consensus 119 ----------------------------~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~ 170 (290)
T PRK06701 119 ----------------------------VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPH 170 (290)
T ss_pred ----------------------------HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 233456788999888643211 1347778888887777542
Q ss_pred --CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 --NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 --~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+++|++||..++...+.. ..|..+|...+.+.+
T Consensus 171 ~~~~g~iV~isS~~~~~~~~~~----~~Y~~sK~a~~~l~~ 207 (290)
T PRK06701 171 LKQGSAIINTGSITGYEGNETL----IDYSATKGAIHAFTR 207 (290)
T ss_pred HhhCCeEEEEecccccCCCCCc----chhHHHHHHHHHHHH
Confidence 23689999998876543322 246666666555444
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=102.95 Aligned_cols=140 Identities=11% Similarity=0.114 Sum_probs=95.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC--CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR--LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+|+||++++++|+++|++|++..|+... ...+ ...++.++.+|+++++++.++++..
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 122 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA------- 122 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH-------
Confidence 589999999999999999999999999988765321 1111 1234667778888887777766432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------------CCcceehhhHHHHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------------SPTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------------~~~~~~~~~~~~ll~~~~~ 141 (189)
.+.++++|++|+++|..... ...++|+.++..+++++..
T Consensus 123 -----------------------------~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 173 (294)
T PRK07985 123 -----------------------------HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP 173 (294)
T ss_pred -----------------------------HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34456789999998853211 1134788888777777654
Q ss_pred C--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 Y--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. ..++||++||..++...+ ....|...|...+.+.+
T Consensus 174 ~m~~~g~iv~iSS~~~~~~~~----~~~~Y~asKaal~~l~~ 211 (294)
T PRK07985 174 LLPKGASIITTSSIQAYQPSP----HLLDYAATKAAILNYSR 211 (294)
T ss_pred hhhcCCEEEEECCchhccCCC----CcchhHHHHHHHHHHHH
Confidence 2 236899999988764322 23357777777665544
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.8e-13 Score=102.67 Aligned_cols=140 Identities=14% Similarity=0.019 Sum_probs=93.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||.+++++|+++|++|++++|+++....+ ...+..++.+|+.+.++++.+++..
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 79 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHI--------- 79 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986543321 1234567778888877776666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHH----HHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNI----VTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~l----l~~~ 139 (189)
.+.+.+.|++|+++|..... + ..++|..+...+ ++.+
T Consensus 80 ---------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (252)
T PRK07035 80 ---------------------------RERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLM 132 (252)
T ss_pred ---------------------------HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33445678888888743210 0 123556665544 4455
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++++++||..+.... +....|..+|...+.+.+
T Consensus 133 ~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~al~~~~~ 170 (252)
T PRK07035 133 KEQGGGSIVNVASVNGVSPG----DFQGIYSITKAAVISMTK 170 (252)
T ss_pred HhCCCcEEEEECchhhcCCC----CCCcchHHHHHHHHHHHH
Confidence 66667899999997665421 223457777777766555
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.8e-13 Score=103.70 Aligned_cols=141 Identities=18% Similarity=0.036 Sum_probs=93.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc---c--cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS---E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|+||++++++|+++|++|++++|+...... . ...++.++.+|++++++++++++..
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~---------- 76 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRA---------- 76 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH----------
Confidence 579999999999999999999999999999987531110 1 1234667888888888877766543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~ 141 (189)
.+.+.+.|++|+++|....... .++|+.+..++++++ .+
T Consensus 77 --------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 130 (263)
T PRK08226 77 --------------------------KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIA 130 (263)
T ss_pred --------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 2334567888888885432211 236677776666654 34
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+... ..+....|...|...+.+.+
T Consensus 131 ~~~~~iv~isS~~~~~~---~~~~~~~Y~~sK~a~~~~~~ 167 (263)
T PRK08226 131 RKDGRIVMMSSVTGDMV---ADPGETAYALTKAAIVGLTK 167 (263)
T ss_pred cCCcEEEEECcHHhccc---CCCCcchHHHHHHHHHHHHH
Confidence 45679999998765321 11223346667776665554
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.6e-13 Score=100.96 Aligned_cols=139 Identities=15% Similarity=0.113 Sum_probs=91.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|++|++++++|+++|++|+++.|+ +...... ...++.++.+|+++++++.++++..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 72 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKV-------- 72 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH--------
Confidence 579999999999999999999999999998883 2222111 1235677888888887777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~ 139 (189)
.+.++++|++|+++|....... .+.|..+. +.+++.+
T Consensus 73 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 124 (242)
T TIGR01829 73 ----------------------------EAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGM 124 (242)
T ss_pred ----------------------------HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2334567888888875432111 12455553 4466667
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
++.+.+++|++||..+....+ ....|...|...+.++
T Consensus 125 ~~~~~~~iv~iss~~~~~~~~----~~~~y~~sk~a~~~~~ 161 (242)
T TIGR01829 125 RERGWGRIINISSVNGQKGQF----GQTNYSAAKAGMIGFT 161 (242)
T ss_pred HhcCCcEEEEEcchhhcCCCC----CcchhHHHHHHHHHHH
Confidence 777778999999976554321 2234555665544443
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=100.64 Aligned_cols=142 Identities=15% Similarity=0.086 Sum_probs=90.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+++||||+|++|+.+++.|+++|++|+++.+ +++..... ...++.++.+|++++++++++++..
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 74 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAV------- 74 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHH-------
Confidence 468999999999999999999999999887654 33322211 1235677788888877776666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----C-------cceehhhHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----P-------TTVMSEGMKNIVTA--- 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~-------~~~~~~~~~~ll~~--- 138 (189)
.+.++++|++|+++|...... . ..+|..+...+++.
T Consensus 75 -----------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06947 75 -----------------------------QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR 125 (248)
T ss_pred -----------------------------HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 223456788999988543211 0 23666666555433
Q ss_pred -HHHCC---ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 -MKEYN---VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 -~~~~~---~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+...+ .+++|++||..+.... +..+..|..+|...+.+.+
T Consensus 126 ~~~~~~~~~~~~ii~~sS~~~~~~~---~~~~~~Y~~sK~~~~~~~~ 169 (248)
T PRK06947 126 RLSTDRGGRGGAIVNVSSIASRLGS---PNEYVDYAGSKGAVDTLTL 169 (248)
T ss_pred HHHhcCCCCCcEEEEECchhhcCCC---CCCCcccHhhHHHHHHHHH
Confidence 32222 3479999998765432 2223457777777664443
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.6e-13 Score=104.35 Aligned_cols=139 Identities=13% Similarity=0.108 Sum_probs=92.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|++|+.++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---------- 75 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARA---------- 75 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH----------
Confidence 57999999999999999999999999999999865443221 235677778888877766665432
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH----H
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK----E 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~----~ 141 (189)
.+ ++++|++|+++|.....+ ..++|+.++.++++.+. +
T Consensus 76 --------------------------~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 128 (263)
T PRK09072 76 --------------------------RE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRA 128 (263)
T ss_pred --------------------------Hh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 11 456788888887643221 12367777766666653 4
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+....+ ....|...|.....+++
T Consensus 129 ~~~~~iv~isS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 164 (263)
T PRK09072 129 QPSAMVVNVGSTFGSIGYP----GYASYCASKFALRGFSE 164 (263)
T ss_pred cCCCEEEEecChhhCcCCC----CccHHHHHHHHHHHHHH
Confidence 4457899998876543221 12345556665544443
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-12 Score=100.58 Aligned_cols=140 Identities=18% Similarity=0.074 Sum_probs=93.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|++|++++++|+++|++|++..++ +....+. ...++.++.+|+++++++.++++.+
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 78 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEA-------- 78 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH--------
Confidence 579999999999999999999999999876553 2222111 1235677888888888877776543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~--- 140 (189)
.+.++++|++|+++|....... .+.|+.++.++++++.
T Consensus 79 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 130 (247)
T PRK12935 79 ----------------------------VNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYI 130 (247)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2334567888888886443211 2366777766666664
Q ss_pred -HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+.... .....|..+|...+.+.+
T Consensus 131 ~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 168 (247)
T PRK12935 131 TEAEEGRIISISSIIGQAGG----FGQTNYSAAKAGMLGFTK 168 (247)
T ss_pred HHcCCcEEEEEcchhhcCCC----CCCcchHHHHHHHHHHHH
Confidence 3445799999997665432 223457777776554443
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=101.79 Aligned_cols=140 Identities=11% Similarity=0.024 Sum_probs=90.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++++||||+|+||++++++|+++|++|++++|++....... .....++.+|+++++++++.++..
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------------- 73 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTA-------------- 73 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHH--------------
Confidence 68999999999999999999999999999999865443221 112357888999888887777543
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-CC------------cceehhhHH----HHHHHHHHCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-SP------------TTVMSEGMK----NIVTAMKEYN 143 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~~------------~~~~~~~~~----~ll~~~~~~~ 143 (189)
.+...+.|++|+++|...+. .+ .++|..+.. .+++.+++.+
T Consensus 74 ----------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 131 (255)
T PRK06057 74 ----------------------AETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG 131 (255)
T ss_pred ----------------------HHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC
Confidence 22234578888887754221 00 124555543 3445555556
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
.+++|++||..+.... +.....|..+|...+.+.
T Consensus 132 ~g~iv~~sS~~~~~g~---~~~~~~Y~~sKaal~~~~ 165 (255)
T PRK06057 132 KGSIINTASFVAVMGS---ATSQISYTASKGGVLAMS 165 (255)
T ss_pred CcEEEEEcchhhccCC---CCCCcchHHHHHHHHHHH
Confidence 6789999987654422 122334666665544433
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.8e-13 Score=102.10 Aligned_cols=145 Identities=15% Similarity=0.173 Sum_probs=89.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++|+||||.||||++|++.|..+|+.|++++-.-...... .+.+.+.+.-|+..+ ++.++|.+++++..+
T Consensus 28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLAapa 102 (350)
T KOG1429|consen 28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLAAPA 102 (350)
T ss_pred cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhccCC
Confidence 5899999999999999999999999999998764333221 122333333333332 444444444443322
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
.|- ++.++ +-.....|..++.+.+..|++.+ +||++.||+.+|
T Consensus 103 sp~------------------------------~y~~n------pvktIktN~igtln~lglakrv~-aR~l~aSTseVY 145 (350)
T KOG1429|consen 103 SPP------------------------------HYKYN------PVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVY 145 (350)
T ss_pred CCc------------------------------ccccC------ccceeeecchhhHHHHHHHHHhC-ceEEEeeccccc
Confidence 220 00000 01123368899999999999988 799999999999
Q ss_pred cCCCCCCCC-----------Ccc-chhhHHHHHHHhh----hcCCCCC
Q psy3626 157 YEPSKVPPM-----------FHN-VNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 157 ~~~~~~p~~-----------~~~-~~~~~~~~~~~l~----~~~~~~t 188 (189)
+++...|.. ..+ |...|..+|++.. +.+++.+
T Consensus 146 gdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~r 193 (350)
T KOG1429|consen 146 GDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVR 193 (350)
T ss_pred CCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEE
Confidence 885433321 122 3445666666654 4455543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.45 E-value=7e-13 Score=116.15 Aligned_cols=122 Identities=16% Similarity=0.130 Sum_probs=85.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++|++.|.++|++|... ..|+++++.+.+.++..
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------~~~l~d~~~v~~~i~~~--------------- 427 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------KGRLEDRSSLLADIRNV--------------- 427 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCCCeEEee------------------ccccccHHHHHHHHHhh---------------
Confidence 689999999999999999999999887321 13455666655555432
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----------CCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----------SPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----------~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
++|+|||+++..... ...++|+.++.+++++|++.+++ ++++|
T Consensus 428 --------------------------~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~S 480 (668)
T PLN02260 428 --------------------------KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFA 480 (668)
T ss_pred --------------------------CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEc
Confidence 468888888765311 12358999999999999999985 66777
Q ss_pred cceeecCC---------C----CCCCC-CccchhhHHHHHHHhhhc
Q psy3626 152 SAFLFYEP---------S----KVPPM-FHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 152 S~~~~~~~---------~----~~p~~-~~~~~~~~~~~~~~l~~~ 183 (189)
|+.++... + ..|.+ ...|..+|...|+++++.
T Consensus 481 s~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~ 526 (668)
T PLN02260 481 TGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREY 526 (668)
T ss_pred ccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhh
Confidence 77665310 1 11222 267888999999888753
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.6e-13 Score=102.79 Aligned_cols=140 Identities=11% Similarity=0.051 Sum_probs=92.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+++||++++++|+++|++|++..|+. +..... ...++.++.+|++++++++++++..
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------- 81 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI------- 81 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH-------
Confidence 6899999999999999999999999998886542 222211 1235678888998888888777543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC------CCC-----------cceehhh----H
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND------LSP-----------TTVMSEG----M 132 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~------~~~-----------~~~~~~~----~ 132 (189)
.+.++++|++|+++|.... .+. .++|+.+ +
T Consensus 82 -----------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 132 (260)
T PRK08416 82 -----------------------------DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGA 132 (260)
T ss_pred -----------------------------HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence 3344567888888864311 111 1123333 4
Q ss_pred HHHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 133 KNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 133 ~~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++.+++.+.+++|++||..+.... +.+..|..+|...+.+.+
T Consensus 133 ~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 177 (260)
T PRK08416 133 QEAAKRMEKVGGGSIISLSSTGNLVYI----ENYAGHGTSKAAVETMVK 177 (260)
T ss_pred HHHHHhhhccCCEEEEEEeccccccCC----CCcccchhhHHHHHHHHH
Confidence 455566666666799999997654321 223456777777766655
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.5e-13 Score=102.89 Aligned_cols=135 Identities=13% Similarity=0.024 Sum_probs=92.1
Q ss_pred EEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 5 AIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 5 ~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+||||+|++|++++++|+++|++|++++|+++...... ..++.++.+|+++++++.++++..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------------- 67 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA------------- 67 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc-------------
Confidence 59999999999999999999999999999865433211 235667777777777776666432
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHCCccEEE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEYNVSVVS 148 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~~~~~~i 148 (189)
+++|++|+++|.....+. .++|+.+..++.++....+.+++|
T Consensus 68 ---------------------------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv 120 (230)
T PRK07041 68 ---------------------------GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLT 120 (230)
T ss_pred ---------------------------CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEE
Confidence 235777777665332111 235677777787766555668999
Q ss_pred EeccceeecCCCCCCCCCccchhhHHHHHHHhhhc
Q psy3626 149 VCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 149 ~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~ 183 (189)
++||..++... +....|...|...+.+.+..
T Consensus 121 ~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 121 FVSGFAAVRPS----ASGVLQGAINAALEALARGL 151 (230)
T ss_pred EECchhhcCCC----CcchHHHHHHHHHHHHHHHH
Confidence 99998876432 22335677777777666643
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.3e-13 Score=102.91 Aligned_cols=141 Identities=13% Similarity=0.036 Sum_probs=93.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|++++||||+|+||++++++|+++|++|+++.|+.. ..... ...++.++.+|++++++++++++..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 74 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL------- 74 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH-------
Confidence 468999999999999999999999999988866433 22111 1345778888888888877766543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH--
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK-- 140 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~-- 140 (189)
.+.+++.|++|+++|....... ..+|+.+..++++++.
T Consensus 75 -----------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (256)
T PRK12743 75 -----------------------------IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARH 125 (256)
T ss_pred -----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3344567888888876432211 2366677666666553
Q ss_pred --HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 --EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 --~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||...... ......|...|...+.+++
T Consensus 126 l~~~~~~g~ii~isS~~~~~~----~~~~~~Y~~sK~a~~~l~~ 165 (256)
T PRK12743 126 MVKQGQGGRIINITSVHEHTP----LPGASAYTAAKHALGGLTK 165 (256)
T ss_pred HHhcCCCeEEEEEeeccccCC----CCCcchhHHHHHHHHHHHH
Confidence 332 368999999765432 1223456667766665544
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.2e-12 Score=99.37 Aligned_cols=139 Identities=15% Similarity=0.058 Sum_probs=90.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCc----c--cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPS----E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~----~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|++|++++++|+++|++|++..+. +..... . ...++..+.+|+++++++.++++..
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 75 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKV-------- 75 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH--------
Confidence 579999999999999999999999998886543 221111 0 1234556677887777776666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~ 139 (189)
.+.++++|++||++|.....+. .++|..+ ++.+++.+
T Consensus 76 ----------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 127 (246)
T PRK12938 76 ----------------------------KAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGM 127 (246)
T ss_pred ----------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3344578999999886532211 2355566 44566666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
++.+.+++|++||..+.... .....|...|...+.+.
T Consensus 128 ~~~~~~~iv~isS~~~~~~~----~~~~~y~~sK~a~~~~~ 164 (246)
T PRK12938 128 VERGWGRIINISSVNGQKGQ----FGQTNYSTAKAGIHGFT 164 (246)
T ss_pred HHcCCeEEEEEechhccCCC----CCChhHHHHHHHHHHHH
Confidence 67777899999997654321 23345666666555443
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=104.25 Aligned_cols=139 Identities=19% Similarity=0.121 Sum_probs=95.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---c--CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---Y--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|+||+++++.|.++|++|++++|+++.+..+ . ...+..+.+|++++++++++++..
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~---------- 79 (296)
T PRK05872 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA---------- 79 (296)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH----------
Confidence 5799999999999999999999999999999987654322 1 123455568888888877766543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH----H
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK----E 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~----~ 141 (189)
.+.+++.|++|+++|.....+. .++|+.++.++++.+. +
T Consensus 80 --------------------------~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~ 133 (296)
T PRK05872 80 --------------------------VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE 133 (296)
T ss_pred --------------------------HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3345678999999986432211 2367777666666553 3
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. .+++|++||..++...+ ....|..+|...+.+.+
T Consensus 134 ~-~g~iv~isS~~~~~~~~----~~~~Y~asKaal~~~~~ 168 (296)
T PRK05872 134 R-RGYVLQVSSLAAFAAAP----GMAAYCASKAGVEAFAN 168 (296)
T ss_pred c-CCEEEEEeCHhhcCCCC----CchHHHHHHHHHHHHHH
Confidence 3 36899999987764322 23356667766665554
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-12 Score=101.16 Aligned_cols=141 Identities=11% Similarity=0.092 Sum_probs=93.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+++||||+|+||+++++.|+++|++|++..++ ++....+ ...++.++.+|++++++++++++..
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----------- 74 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATA----------- 74 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-----------
Confidence 489999999999999999999999999887654 3222111 1245677888888888877776542
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcC-CCEEEEeeccCCC--------C---------CCcceehhhHHHHHHHH
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEG-KDGVVVALGTRND--------L---------SPTTVMSEGMKNIVTAM 139 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vv~~~~~~~~--------~---------~~~~~~~~~~~~ll~~~ 139 (189)
.+.+++ +|++|+++|.... . ...+.|..+..++++++
T Consensus 75 -------------------------~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 129 (253)
T PRK08642 75 -------------------------TEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAA 129 (253)
T ss_pred -------------------------HHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHH
Confidence 222344 7888888764211 0 01345677766666665
Q ss_pred H----HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 140 K----EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 140 ~----~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
. +.+.+++|++||..... + ..++..|..+|...+.+.+.
T Consensus 130 ~~~~~~~~~g~iv~iss~~~~~--~--~~~~~~Y~~sK~a~~~l~~~ 172 (253)
T PRK08642 130 LPGMREQGFGRIINIGTNLFQN--P--VVPYHDYTTAKAALLGLTRN 172 (253)
T ss_pred HHHHHhcCCeEEEEECCccccC--C--CCCccchHHHHHHHHHHHHH
Confidence 4 45567999999865432 1 12344688888888777763
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=112.16 Aligned_cols=140 Identities=16% Similarity=0.004 Sum_probs=99.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|.++|++|++++|+.+....+ .+.++.++.+|+++++++.++++.+
T Consensus 316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~--------- 386 (582)
T PRK05855 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWV--------- 386 (582)
T ss_pred CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986554322 1245678888998888887777543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----HH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA----MK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~----~~ 140 (189)
.+..+++|++|+++|....... .++|+.++.++.++ ++
T Consensus 387 ---------------------------~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 439 (582)
T PRK05855 387 ---------------------------RAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMV 439 (582)
T ss_pred ---------------------------HHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3445568999999987543211 23677776665554 45
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .++||++||..++... +....|..+|...+.+.+
T Consensus 440 ~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~ 477 (582)
T PRK05855 440 ERGTGGHIVNVASAAAYAPS----RSLPAYATSKAAVLMLSE 477 (582)
T ss_pred hcCCCcEEEEECChhhccCC----CCCcHHHHHHHHHHHHHH
Confidence 554 3699999998876532 233457777776655443
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-12 Score=99.80 Aligned_cols=140 Identities=16% Similarity=0.069 Sum_probs=93.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|||++|+||.+++++|+++|++|+++.|+++..... ...++.++.+|++++++++++++..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~--------- 71 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQA--------- 71 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999875433221 1234677788888887777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHH----HHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKN----IVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~----ll~~~~ 140 (189)
.+.++++|++|+++|.....+ ...+|+.++.. +++.++
T Consensus 72 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 124 (254)
T TIGR02415 72 ---------------------------AEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFK 124 (254)
T ss_pred ---------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 233445788888887543211 12356665544 445555
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||..+.... +....|...|...+.+.+
T Consensus 125 ~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 162 (254)
T TIGR02415 125 KQGHGGKIINAASIAGHEGN----PILSAYSSTKFAVRGLTQ 162 (254)
T ss_pred hCCCCeEEEEecchhhcCCC----CCCcchHHHHHHHHHHHH
Confidence 544 3699999997765432 234457777777665554
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.9e-12 Score=98.91 Aligned_cols=138 Identities=14% Similarity=0.079 Sum_probs=108.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc----c-CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE----Y-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~----~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
+.++||||++++|+.++.+++++|.++.+.+.+++...+. . ...+..+.||+++++++.+..+.
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~----------- 107 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKK----------- 107 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHH-----------
Confidence 4799999999999999999999999999999987766532 1 13688999999999988876643
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------Ccceehhh----HHHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEG----MKNIVTAMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~----~~~ll~~~~~ 141 (189)
+.+..+.+|++|++||.....+ .+++|+.+ ++++++.|.+
T Consensus 108 -------------------------Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~ 162 (300)
T KOG1201|consen 108 -------------------------VKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLE 162 (300)
T ss_pred -------------------------HHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHh
Confidence 5677888999999999755332 23467666 6788999999
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
.+-+++|-++|..+... +....+|+.+|.++.-+
T Consensus 163 ~~~GHIV~IaS~aG~~g----~~gl~~YcaSK~a~vGf 196 (300)
T KOG1201|consen 163 NNNGHIVTIASVAGLFG----PAGLADYCASKFAAVGF 196 (300)
T ss_pred cCCceEEEehhhhcccC----CccchhhhhhHHHHHHH
Confidence 88899999999988654 33445688887776543
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-13 Score=115.64 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=94.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC---cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL---EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++|+|||||||+|+++++.|++.+. +|+++.|........ .++ .-.+.+..-++.+-+.. |
T Consensus 120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~--eRl---~~~l~~~~lf~~l~~~~-----------g 183 (605)
T PLN02503 120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAI--ERL---KNEVIDAELFKCLQETH-----------G 183 (605)
T ss_pred CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHH--HHH---HHHHhhhhhHHHHHHhc-----------C
Confidence 6899999999999999999998643 689999976543221 100 00000000001110000 0
Q ss_pred CCCCccccCceeEEeccccCH------HHHHHHhcCCCEEEEeeccCCCCCC----cceehhhHHHHHHHHHHC-CccEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKL------ADVKKAIEGKDGVVVALGTRNDLSP----TTVMSEGMKNIVTAMKEY-NVSVV 147 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~vv~~~~~~~~~~~----~~~~~~~~~~ll~~~~~~-~~~~~ 147 (189)
.........++.++.||+.++ +..+.+.+++|+|||+|+....... .++|+.++.+++++|++. +.++|
T Consensus 184 ~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~f 263 (605)
T PLN02503 184 KSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLF 263 (605)
T ss_pred ccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence 000000145789999999886 4566667789999999998664422 358999999999999886 57899
Q ss_pred EEeccceeecCC
Q psy3626 148 SVCLSAFLFYEP 159 (189)
Q Consensus 148 i~iSS~~~~~~~ 159 (189)
||+||+.++++.
T Consensus 264 V~vSTayVyG~~ 275 (605)
T PLN02503 264 LQVSTAYVNGQR 275 (605)
T ss_pred EEccCceeecCC
Confidence 999999988764
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3e-12 Score=98.86 Aligned_cols=140 Identities=15% Similarity=0.113 Sum_probs=92.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEecccc--ChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVL--KLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~ 72 (189)
++++||||+|++|.+++++|+++|++|++++|+++....+ ...++.++.+|++ ++++++++.+.
T Consensus 13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~------- 85 (247)
T PRK08945 13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADT------- 85 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHH-------
Confidence 5899999999999999999999999999999986543221 1123455666664 45555444432
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHH-
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAM- 139 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~- 139 (189)
+.+.+++.|++|+++|...... ..++|+.++.++++++
T Consensus 86 -----------------------------~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~ 136 (247)
T PRK08945 86 -----------------------------IEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALL 136 (247)
T ss_pred -----------------------------HHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence 3344567899999887643210 1236777755555544
Q ss_pred ---HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ---KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ---~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+....+ ....|..+|...+.+++
T Consensus 137 ~~l~~~~~~~iv~~ss~~~~~~~~----~~~~Y~~sK~a~~~~~~ 177 (247)
T PRK08945 137 PLLLKSPAASLVFTSSSVGRQGRA----NWGAYAVSKFATEGMMQ 177 (247)
T ss_pred HHHHhCCCCEEEEEccHhhcCCCC----CCcccHHHHHHHHHHHH
Confidence 566778999999987654322 23356777776666554
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.43 E-value=3e-12 Score=100.86 Aligned_cols=106 Identities=21% Similarity=0.177 Sum_probs=71.6
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCCc
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLPS 83 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (189)
|+||||+||||+++++.|+++|++|++++|++........... .+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~---------------------------- 48 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGY----KPWAP---------------------------- 48 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceee----ecccc----------------------------
Confidence 6899999999999999999999999999998765432210000 00000
Q ss_pred cccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---------CcceehhhHHHHHHHHHHCCcc--EEEEecc
Q psy3626 84 EYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---------PTTVMSEGMKNIVTAMKEYNVS--VVSVCLS 152 (189)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---------~~~~~~~~~~~ll~~~~~~~~~--~~i~iSS 152 (189)
..+.+.+.++|+|||+++...... ..+.|+.++++++++|++.+++ ++|+.||
T Consensus 49 ----------------~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~ 112 (292)
T TIGR01777 49 ----------------LAESEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASA 112 (292)
T ss_pred ----------------cchhhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeee
Confidence 122345567888999888643211 1246899999999999999864 4444444
Q ss_pred ceeec
Q psy3626 153 AFLFY 157 (189)
Q Consensus 153 ~~~~~ 157 (189)
...++
T Consensus 113 ~~~yg 117 (292)
T TIGR01777 113 VGYYG 117 (292)
T ss_pred EEEeC
Confidence 44444
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.7e-13 Score=102.92 Aligned_cols=140 Identities=14% Similarity=0.052 Sum_probs=93.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|+++.|+++..+.+ ...++.++.+|+++++++++.++..
T Consensus 10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 80 (258)
T PRK06949 10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHA--------- 80 (258)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987654322 1235677888888888777766542
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+..+++|++|+++|....... ...|+.+..++++.+ .
T Consensus 81 ---------------------------~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (258)
T PRK06949 81 ---------------------------ETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMI 133 (258)
T ss_pred ---------------------------HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHH
Confidence 2334567888888875332111 235666665555544 3
Q ss_pred HCC--------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN--------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~--------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.. .+++|++||..+.... +...+|...|...+.+.+
T Consensus 134 ~~~~~~~~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 178 (258)
T PRK06949 134 ARAKGAGNTKPGGRIINIASVAGLRVL----PQIGLYCMSKAAVVHMTR 178 (258)
T ss_pred hcCCcCCCCCCCeEEEEECcccccCCC----CCccHHHHHHHHHHHHHH
Confidence 332 3589999998765421 223356666666555544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.4e-12 Score=99.19 Aligned_cols=140 Identities=11% Similarity=0.078 Sum_probs=92.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|+++.++.. ....+ ...++.++.+|+++++++.++++.+
T Consensus 10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-------- 81 (258)
T PRK09134 10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARA-------- 81 (258)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH--------
Confidence 58999999999999999999999999988776532 22111 1245677888888888777766543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHH--
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKE-- 141 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~-- 141 (189)
.+..+++|++|+++|...... ..++|+.++.++++++..
T Consensus 82 ----------------------------~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 133 (258)
T PRK09134 82 ----------------------------SAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARAL 133 (258)
T ss_pred ----------------------------HHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 223456788888887543211 124677787777776654
Q ss_pred --CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 --YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 --~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|+++|....... | ....|..+|...+.+.+
T Consensus 134 ~~~~~~~iv~~~s~~~~~~~---p-~~~~Y~~sK~a~~~~~~ 171 (258)
T PRK09134 134 PADARGLVVNMIDQRVWNLN---P-DFLSYTLSKAALWTATR 171 (258)
T ss_pred HhcCCceEEEECchhhcCCC---C-CchHHHHHHHHHHHHHH
Confidence 334688888776543321 1 12357777776665554
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3e-12 Score=98.48 Aligned_cols=140 Identities=12% Similarity=0.075 Sum_probs=93.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc----c--cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS----E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~----~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|++|+++++.|+++|++++++.|+.+.. .. + ...++.++.+|+++++++++.++..
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 77 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAA-------- 77 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH--------
Confidence 5899999999999999999999999998877754321 11 0 1245667777888777777766542
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~- 142 (189)
.+.++++|++|+++|.....+ ...+|+.+..++++++.+.
T Consensus 78 ----------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 129 (245)
T PRK12937 78 ----------------------------ETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHL 129 (245)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHh
Confidence 233456788888888643211 1236777777777776543
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+++|++||....... +....|...|...+.+++
T Consensus 130 ~~~~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (245)
T PRK12937 130 GQGGRIINLSTSVIALPL----PGYGPYAASKAAVEGLVH 165 (245)
T ss_pred ccCcEEEEEeeccccCCC----CCCchhHHHHHHHHHHHH
Confidence 23589999887654321 223456777777666554
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=100.29 Aligned_cols=136 Identities=17% Similarity=0.137 Sum_probs=90.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++++|+||+|++|+++++.|+++|++|++++|+++....+.. .+..++.+|+++++++++.++.
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--------------- 74 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--------------- 74 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH---------------
Confidence 589999999999999999999999999999998654433211 1345666777776665555432
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH----CC-c
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE----YN-V 144 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~----~~-~ 144 (189)
..++|++|+++|....... ..+|..+..++++++.+ .+ .
T Consensus 75 -------------------------~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 129 (245)
T PRK07060 75 -------------------------AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRG 129 (245)
T ss_pred -------------------------hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 1246777777775432211 12567777666666543 33 4
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++||++||..++... .....|...|...+.+.+
T Consensus 130 ~~iv~~sS~~~~~~~----~~~~~y~~sK~a~~~~~~ 162 (245)
T PRK07060 130 GSIVNVSSQAALVGL----PDHLAYCASKAALDAITR 162 (245)
T ss_pred cEEEEEccHHHcCCC----CCCcHhHHHHHHHHHHHH
Confidence 799999998765432 223457777777766554
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.8e-12 Score=99.57 Aligned_cols=140 Identities=11% Similarity=0.022 Sum_probs=90.4
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCCc-----------c------cCCceeEEeccccChhHHHHh
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLPS-----------E------YHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-----------~------~~~~~~~~~~d~~~~~~~~~~ 62 (189)
++++||||+| ++|.+++++|+++|++|++++|++..... + ...++.++.+|+++++++..+
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 85 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV 85 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 5799999995 79999999999999999999987432210 0 012344555555555544444
Q ss_pred hhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh
Q psy3626 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG 131 (189)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~ 131 (189)
++. +.+.+++.|++|+++|.....+. .++|+.+
T Consensus 86 ~~~------------------------------------~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 129 (256)
T PRK12748 86 FYA------------------------------------VSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRA 129 (256)
T ss_pred HHH------------------------------------HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHH
Confidence 432 22334568999999886432211 2377788
Q ss_pred HHHHHHHHHH----CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 132 MKNIVTAMKE----YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 132 ~~~ll~~~~~----~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++++++.. .+.+++|++||..++... .....|...|...+.+++
T Consensus 130 ~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~----~~~~~Y~~sK~a~~~~~~ 179 (256)
T PRK12748 130 TMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM----PDELAYAATKGAIEAFTK 179 (256)
T ss_pred HHHHHHHHHHHhhhcCCeEEEEECCccccCCC----CCchHHHHHHHHHHHHHH
Confidence 8888777643 345699999998765421 123457777777776654
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-12 Score=99.79 Aligned_cols=140 Identities=10% Similarity=0.008 Sum_probs=94.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC--Ccc--cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL--PSE--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++++|||++|+||++++++|+++|++|+++++..... ..+ ....+..+++|++++++++++++..
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----------- 79 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERA----------- 79 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH-----------
Confidence 6899999999999999999999999999887653210 111 1234667888888888877777543
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----HHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----KEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~~~ 142 (189)
.+.+++.|++|+++|...... ..++|+.+..++++++ .+.
T Consensus 80 -------------------------~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (253)
T PRK08993 80 -------------------------VAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ 134 (253)
T ss_pred -------------------------HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 334557889999888643221 1236777766655554 344
Q ss_pred C-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .+++|++||..++...+ ....|...|...+.+.+
T Consensus 135 ~~~g~iv~isS~~~~~~~~----~~~~Y~~sKaa~~~~~~ 170 (253)
T PRK08993 135 GNGGKIINIASMLSFQGGI----RVPSYTASKSGVMGVTR 170 (253)
T ss_pred CCCeEEEEECchhhccCCC----CCcchHHHHHHHHHHHH
Confidence 3 36899999987765322 22356777777665554
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-12 Score=109.45 Aligned_cols=140 Identities=14% Similarity=0.042 Sum_probs=100.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+..+ ...+...+.+|++++++++++++..
T Consensus 270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 337 (520)
T PRK06484 270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQI------------ 337 (520)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHH------------
Confidence 6799999999999999999999999999999986554432 2245567888999988888777543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHHC--Cc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKEY--NV 144 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~~--~~ 144 (189)
.+.+++.|++|+++|...... ..++|+.++.++.+.+... +.
T Consensus 338 ------------------------~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 393 (520)
T PRK06484 338 ------------------------QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG 393 (520)
T ss_pred ------------------------HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 344567899999998643211 1247888877776665542 34
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++||++||..+....+ ....|..+|...+.+.+
T Consensus 394 g~iv~isS~~~~~~~~----~~~~Y~asKaal~~l~~ 426 (520)
T PRK06484 394 GVIVNLGSIASLLALP----PRNAYCASKAAVTMLSR 426 (520)
T ss_pred CEEEEECchhhcCCCC----CCchhHHHHHHHHHHHH
Confidence 6999999988765322 23457777777765555
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.3e-12 Score=97.11 Aligned_cols=137 Identities=18% Similarity=0.091 Sum_probs=90.1
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++|||++|++|++++++|+++|++|++++|+.. ..... ...++.++.+|++++++++++++..
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------- 70 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEI---------- 70 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH----------
Confidence 589999999999999999999999999988752 21111 1224567777777777766666432
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH----
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE---- 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~---- 141 (189)
.+.+.++|++|+++|....... .++|..++.++++.+..
T Consensus 71 --------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (239)
T TIGR01830 71 --------------------------EEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIK 124 (239)
T ss_pred --------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 2233467888888886532211 23677777777776654
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
.+.++++++||..+....+ ....|...|...+.+.
T Consensus 125 ~~~~~~v~~sS~~~~~g~~----~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 125 QRSGRIINISSVVGLMGNA----GQANYAASKAGVIGFT 159 (239)
T ss_pred cCCeEEEEECCccccCCCC----CCchhHHHHHHHHHHH
Confidence 4567999999977655322 2234555665544443
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-12 Score=114.60 Aligned_cols=140 Identities=16% Similarity=0.089 Sum_probs=97.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|++|++++++|+++|++|++++|+++...+. ...++.++.+|++++++++++++.+
T Consensus 372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~--------- 442 (657)
T PRK07201 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDI--------- 442 (657)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999987654322 1235677788888888777766532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-------------CcceehhhHHHH----HHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-------------PTTVMSEGMKNI----VTA 138 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-------------~~~~~~~~~~~l----l~~ 138 (189)
.+.++++|++|+++|...... ..++|+.++.++ ++.
T Consensus 443 ---------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 495 (657)
T PRK07201 443 ---------------------------LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPH 495 (657)
T ss_pred ---------------------------HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334456888999888532110 123566665444 555
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+++|++||..++...+ ....|..+|...+.+.+
T Consensus 496 ~~~~~~g~iv~isS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 534 (657)
T PRK07201 496 MRERRFGHVVNVSSIGVQTNAP----RFSAYVASKAALDAFSD 534 (657)
T ss_pred hhhcCCCEEEEECChhhcCCCC----CcchHHHHHHHHHHHHH
Confidence 5666778999999988765322 23356677777665554
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.3e-12 Score=97.97 Aligned_cols=140 Identities=10% Similarity=-0.055 Sum_probs=91.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|+||++++++|+++|++|++..|+.. ..... ...+..++.+|+++++++.++++..
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 78 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKAT-------- 78 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHH--------
Confidence 58999999999999999999999999988776432 11110 1134556777887777766655432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~- 142 (189)
.+.+.+.|++|+++|.....+. ..+|+.+..++++++.+.
T Consensus 79 ----------------------------~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 130 (252)
T PRK06077 79 ----------------------------IDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM 130 (252)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh
Confidence 3334568999999885332211 245666766666666542
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+++|++||..++... +....|...|...+.+.+
T Consensus 131 ~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~~~~~~~~ 166 (252)
T PRK06077 131 REGGAIVNIASVAGIRPA----YGLSIYGAMKAAVINLTK 166 (252)
T ss_pred hcCcEEEEEcchhccCCC----CCchHHHHHHHHHHHHHH
Confidence 23689999998765421 223456777777665554
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=114.85 Aligned_cols=140 Identities=19% Similarity=0.129 Sum_probs=98.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-----CceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-----SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|+||++++++|+++|++|++++|+++....... .++.++.+|++++++++++++..
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~---------- 492 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEA---------- 492 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHH----------
Confidence 589999999999999999999999999999998765432211 26778888888888877766532
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH----HHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT----AMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~----~~~~ 141 (189)
.+..+++|++|+++|....... .++|..+..++++ .+++
T Consensus 493 --------------------------~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~ 546 (681)
T PRK08324 493 --------------------------ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKA 546 (681)
T ss_pred --------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 2334578999999886543221 2356667666644 4455
Q ss_pred CCc-cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNV-SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~-~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. ++||++||..+.... +....|..+|...+.+.+
T Consensus 547 ~~~~g~iV~vsS~~~~~~~----~~~~~Y~asKaa~~~l~~ 583 (681)
T PRK08324 547 QGLGGSIVFIASKNAVNPG----PNFGAYGAAKAAELHLVR 583 (681)
T ss_pred cCCCcEEEEECCccccCCC----CCcHHHHHHHHHHHHHHH
Confidence 554 799999998765432 223457777777776655
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.5e-12 Score=90.89 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=93.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcc---------cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSE---------YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
++++|+||+|++|.+++++|+++|. .|+++.|++...... ...++.++.+|+++++++++.++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----- 75 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI----- 75 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH-----
Confidence 5799999999999999999999986 678888876543221 1234556677777766666555432
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK 140 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~ 140 (189)
.+...+.|.+++++|...... ..+.|+.++.++++++.
T Consensus 76 -------------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (180)
T smart00822 76 -------------------------------PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTR 124 (180)
T ss_pred -------------------------------HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhc
Confidence 122345688888887543211 13477888999999998
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++++++||..+....+ ....|...|...+.+.+
T Consensus 125 ~~~~~~ii~~ss~~~~~~~~----~~~~y~~sk~~~~~~~~ 161 (180)
T smart00822 125 DLPLDFFVLFSSVAGVLGNP----GQANYAAANAFLDALAA 161 (180)
T ss_pred cCCcceEEEEccHHHhcCCC----CchhhHHHHHHHHHHHH
Confidence 87888999999987654322 22345555655555543
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3e-12 Score=99.11 Aligned_cols=144 Identities=13% Similarity=0.027 Sum_probs=93.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEe-cCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLL-RDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++.. |+++..... .......+.+|+++++++...++...
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~------- 77 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD------- 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHH-------
Confidence 6899999999999999999999999998875 443332211 12345677788888777666554321
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHh--cCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI--EGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~ 141 (189)
+.+.+.. .+.|++|+++|....... .++|+.++..+++++..
T Consensus 78 -------------------------~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~ 132 (252)
T PRK12747 78 -------------------------NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALS 132 (252)
T ss_pred -------------------------HHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 0111122 268999999985432111 13777777776665543
Q ss_pred C--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 Y--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. +.+++|++||..+.... +....|..+|...+.+.+
T Consensus 133 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~ 170 (252)
T PRK12747 133 RLRDNSRIINISSAATRISL----PDFIAYSMTKGAINTMTF 170 (252)
T ss_pred HhhcCCeEEEECCcccccCC----CCchhHHHHHHHHHHHHH
Confidence 2 23699999999875432 223457778887776665
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.7e-12 Score=100.62 Aligned_cols=138 Identities=15% Similarity=0.024 Sum_probs=89.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------C-CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------H-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|++|++++++|+++|++|++++|+++...... . ....++.+|++++++++...+..
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 72 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADI-------- 72 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHH--------
Confidence 57999999999999999999999999999998765432210 1 12345678888877776655432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~---- 139 (189)
.+.++++|++|+++|...... ..++|+.+..++++++
T Consensus 73 ----------------------------~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 124 (272)
T PRK07832 73 ----------------------------HAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPM 124 (272)
T ss_pred ----------------------------HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 333456899999988643211 1246667766666654
Q ss_pred HHC-CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 140 KEY-NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 140 ~~~-~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
.+. ..+++|++||..+....+ ....|...|...+.+
T Consensus 125 ~~~~~~g~ii~isS~~~~~~~~----~~~~Y~~sK~a~~~~ 161 (272)
T PRK07832 125 VAAGRGGHLVNVSSAAGLVALP----WHAAYSASKFGLRGL 161 (272)
T ss_pred HhCCCCcEEEEEccccccCCCC----CCcchHHHHHHHHHH
Confidence 333 246999999986643221 233455566544433
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.4e-12 Score=99.07 Aligned_cols=140 Identities=12% Similarity=0.109 Sum_probs=93.3
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCC---CcccCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRL---PSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+ +.||++++++|+++|++|++..|+.... .++...++.++++|++++++++++++..
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~---------- 77 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATI---------- 77 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHH----------
Confidence 679999999 7999999999999999999998873211 1112235678889999998888877543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~~~ 141 (189)
.+.+++.|++|+++|...+ .+ ..++|..+...+.+.+..
T Consensus 78 --------------------------~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~ 131 (252)
T PRK06079 78 --------------------------KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARP 131 (252)
T ss_pred --------------------------HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHH
Confidence 3445678899998885432 10 123566665554444432
Q ss_pred C--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 Y--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. +.+++|++||..+... .+.+..|..+|.....+.+
T Consensus 132 ~~~~~g~Iv~iss~~~~~~----~~~~~~Y~asKaal~~l~~ 169 (252)
T PRK06079 132 LLNPGASIVTLTYFGSERA----IPNYNVMGIAKAALESSVR 169 (252)
T ss_pred hcccCceEEEEeccCcccc----CCcchhhHHHHHHHHHHHH
Confidence 1 2368999998765432 1234456777777766555
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.6e-12 Score=99.41 Aligned_cols=139 Identities=14% Similarity=0.081 Sum_probs=92.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------C-CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------H-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||++++++|. +|++|++++|++++++++. . ..+.++.+|++++++++++++..
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-------- 71 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQT-------- 71 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHH--------
Confidence 579999999999999999998 5999999999876554321 1 23677888998888887776542
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~ 139 (189)
.+..++.|++|+++|....... ..+|..+. +.+++.+
T Consensus 72 ----------------------------~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m 123 (246)
T PRK05599 72 ----------------------------QELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADEL 123 (246)
T ss_pred ----------------------------HHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3345678999999886432211 11333333 3445566
Q ss_pred HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+ .+++|++||..+....+ ....|...|.....+.+
T Consensus 124 ~~~~~~g~Iv~isS~~~~~~~~----~~~~Y~asKaa~~~~~~ 162 (246)
T PRK05599 124 RAQTAPAAIVAFSSIAGWRARR----ANYVYGSTKAGLDAFCQ 162 (246)
T ss_pred HhcCCCCEEEEEeccccccCCc----CCcchhhHHHHHHHHHH
Confidence 5553 47999999987654221 23346666766554444
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.9e-12 Score=96.06 Aligned_cols=137 Identities=11% Similarity=0.010 Sum_probs=85.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
++++||||+|+||++++++|+++|++|+++.|+ ++..+.+ ...+..++.+|+++++++.+.++.
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~-------------- 72 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK-------------- 72 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH--------------
Confidence 589999999999999999999999999887664 2222211 112345666777777665554432
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC--CccE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY--NVSV 146 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~--~~~~ 146 (189)
.++.|++|+++|...... ..++|+.+..+++..+... ..++
T Consensus 73 --------------------------~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~ 126 (237)
T PRK12742 73 --------------------------SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGR 126 (237)
T ss_pred --------------------------hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCe
Confidence 234677777776543211 1235666766665444332 2469
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+...+ .+....|...|...+.+.+
T Consensus 127 iv~isS~~~~~~~---~~~~~~Y~~sKaa~~~~~~ 158 (237)
T PRK12742 127 IIIIGSVNGDRMP---VAGMAAYAASKSALQGMAR 158 (237)
T ss_pred EEEEeccccccCC---CCCCcchHHhHHHHHHHHH
Confidence 9999997653211 1234467777877776665
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=96.41 Aligned_cols=140 Identities=13% Similarity=0.110 Sum_probs=93.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+||+|+||+.++++|+++|++ |++++|+++..... ...++.++.+|++++++++++++..
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 78 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAA-------- 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH--------
Confidence 57999999999999999999999998 99999976543311 1234666778888877777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
.+.++++|++|+++|....... ..+|..+..++++++
T Consensus 79 ----------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 130 (260)
T PRK06198 79 ----------------------------DEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLM 130 (260)
T ss_pred ----------------------------HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2334567888888876432211 235666666665554
Q ss_pred HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+ .+++|++||..++...+ ....|...|...+.+.+
T Consensus 131 ~~~~~~g~iv~~ss~~~~~~~~----~~~~Y~~sK~a~~~~~~ 169 (260)
T PRK06198 131 RRRKAEGTIVNIGSMSAHGGQP----FLAAYCASKGALATLTR 169 (260)
T ss_pred HhcCCCCEEEEECCcccccCCC----CcchhHHHHHHHHHHHH
Confidence 3332 36899999987754322 23457777777665554
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.1e-12 Score=99.49 Aligned_cols=140 Identities=12% Similarity=0.019 Sum_probs=90.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC---------CCCCcc------cCCceeEEeccccChhHHHHhhhcC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP---------QRLPSE------YHSKVEIIQGDVLKLADVKKAIEGK 66 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~---------~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~ 66 (189)
++++||||+++||++++++|+++|++|++++|+. +..... ...++.++.+|+++++++.++++.+
T Consensus 7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 86 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAA 86 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999988764 111111 1234556667777777666655432
Q ss_pred cceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH
Q psy3626 67 DGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI 135 (189)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l 135 (189)
.+.+++.|++|+++|....... .++|+.+...+
T Consensus 87 ------------------------------------~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 130 (286)
T PRK07791 87 ------------------------------------VETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFAT 130 (286)
T ss_pred ------------------------------------HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHH
Confidence 3345678999999986542211 23667775555
Q ss_pred HH----HHHHCC------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 136 VT----AMKEYN------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 136 l~----~~~~~~------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+ .+++.+ .++||++||..+....+ ....|...|..++.+.+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----~~~~Y~asKaal~~l~~ 182 (286)
T PRK07791 131 LRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV----GQGNYSAAKAGIAALTL 182 (286)
T ss_pred HHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC----CchhhHHHHHHHHHHHH
Confidence 44 443321 25899999987654322 23346666766655544
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.5e-12 Score=97.83 Aligned_cols=140 Identities=18% Similarity=0.144 Sum_probs=92.2
Q ss_pred ceEEEEcCCC-hhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cC-CceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATG-MTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YH-SKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG-~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
++++||||+| .||+++++.|+++|++|++.+|++.+.... .. .++.++.+|++++++++++++..
T Consensus 18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------ 91 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA------ 91 (262)
T ss_pred CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH------
Confidence 6899999997 799999999999999999999876544321 01 34667778888877777666432
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH----
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT---- 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~---- 137 (189)
.+.+++.|++|+++|....... .++|+.+...+++
T Consensus 92 ------------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 141 (262)
T PRK07831 92 ------------------------------VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALR 141 (262)
T ss_pred ------------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 2334567888888885432211 1255666554444
Q ss_pred HHHHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++..+ .+++|++||..+.... .....|...|...+.+.+
T Consensus 142 ~~~~~~~~g~iv~~ss~~~~~~~----~~~~~Y~~sKaal~~~~~ 182 (262)
T PRK07831 142 YMRARGHGGVIVNNASVLGWRAQ----HGQAHYAAAKAGVMALTR 182 (262)
T ss_pred HHHhcCCCcEEEEeCchhhcCCC----CCCcchHHHHHHHHHHHH
Confidence 444444 5689998887654321 223357777777766655
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.6e-12 Score=96.45 Aligned_cols=141 Identities=15% Similarity=0.092 Sum_probs=90.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|+||.+++++|+++|++|++..++. +..... ...++.++.+|+++++++.++++..
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 74 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAV-------- 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHH--------
Confidence 4699999999999999999999999988776443 221111 1234567777888777777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----C-------cceehhhHHHHHHHHHH-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----P-------TTVMSEGMKNIVTAMKE- 141 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~-------~~~~~~~~~~ll~~~~~- 141 (189)
.+.+++.|++|+++|...... . .++|+.++.++++++..
T Consensus 75 ----------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (248)
T PRK06123 75 ----------------------------DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKR 126 (248)
T ss_pred ----------------------------HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 233456788888887643211 1 33667776666655533
Q ss_pred ---CC---ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 ---YN---VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ---~~---~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.. .+++|++||..+.... |..+..|...|...+.+.+
T Consensus 127 ~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~~Y~~sKaa~~~~~~ 169 (248)
T PRK06123 127 MSTRHGGRGGAIVNVSSMAARLGS---PGEYIDYAASKGAIDTMTI 169 (248)
T ss_pred HHhcCCCCCeEEEEECchhhcCCC---CCCccchHHHHHHHHHHHH
Confidence 21 2479999998765432 2222347777777766544
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=8e-12 Score=96.42 Aligned_cols=132 Identities=15% Similarity=0.120 Sum_probs=96.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc--cC--CceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE--YH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~--~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
.+.|+|||||+|++++.+|.+.|-+|++=.|..+ ....+ .+ .++-+...|+.|+++++++++-
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~------------ 130 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH------------ 130 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHh------------
Confidence 4679999999999999999999999998888543 22222 11 3466777777777776666654
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC---CCCCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN---DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~---~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
..++|+.+|-.. +...+++|+++.+.+.+.|++.|+.|+|++|+..
T Consensus 131 -------------------------------sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg 179 (391)
T KOG2865|consen 131 -------------------------------SNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG 179 (391)
T ss_pred -------------------------------CcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcc
Confidence 466777777543 3456789999999999999999999999999987
Q ss_pred eecCCCCCCCCCccchhhHHHHHHHhhhc
Q psy3626 155 LFYEPSKVPPMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~l~~~ 183 (189)
..-. .-..+..+|...|+..++.
T Consensus 180 anv~------s~Sr~LrsK~~gE~aVrda 202 (391)
T KOG2865|consen 180 ANVK------SPSRMLRSKAAGEEAVRDA 202 (391)
T ss_pred cccc------ChHHHHHhhhhhHHHHHhh
Confidence 4311 1123566677777777643
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.2e-12 Score=99.42 Aligned_cols=139 Identities=15% Similarity=0.052 Sum_probs=93.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|+||++++++|+++|++|++.++... ..... .+.++.++.+|+++++++.++++.+
T Consensus 13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~-------- 84 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA-------- 84 (306)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH--------
Confidence 68999999999999999999999999999887532 21111 1235667778888877777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~--- 140 (189)
.+ ++++|++|+++|...... ..++|+.++.++++++.
T Consensus 85 ----------------------------~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~ 135 (306)
T PRK07792 85 ----------------------------VG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYW 135 (306)
T ss_pred ----------------------------HH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33 567899999998654321 12367777777766543
Q ss_pred -HC-------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -EY-------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~-------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+. ..+++|++||..+....+ ....|...|...+.+.+
T Consensus 136 ~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~Y~asKaal~~l~~ 180 (306)
T PRK07792 136 RAKAKAAGGPVYGRIVNTSSEAGLVGPV----GQANYGAAKAGITALTL 180 (306)
T ss_pred HHhhcccCCCCCcEEEEECCcccccCCC----CCchHHHHHHHHHHHHH
Confidence 21 125899999987654322 23346667776665544
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.7e-12 Score=95.78 Aligned_cols=137 Identities=17% Similarity=0.155 Sum_probs=83.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+|+||++++++|++++ ..|....|+... .....++.++++|+++++++++..+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~Dls~~~~~~~~~~--------------- 63 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--DFQHDNVQWHALDVTDEAEIKQLSE--------------- 63 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--ccccCceEEEEecCCCHHHHHHHHH---------------
Confidence 489999999999999999999985 555555554432 1223567788888888877655332
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----C------------Ccceehhh----HHHHHHH
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----S------------PTTVMSEG----MKNIVTA 138 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~------------~~~~~~~~----~~~ll~~ 138 (189)
.+++.|++|+++|..... . ...+|+.+ ++.+++.
T Consensus 64 -------------------------~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 118 (235)
T PRK09009 64 -------------------------QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK 118 (235)
T ss_pred -------------------------hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 234567777777654211 0 01234444 3445555
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.++++++||..+.......+ .+..|...|...+.+.+
T Consensus 119 ~~~~~~~~i~~iss~~~~~~~~~~~-~~~~Y~asK~a~~~~~~ 160 (235)
T PRK09009 119 LKQSESAKFAVISAKVGSISDNRLG-GWYSYRASKAALNMFLK 160 (235)
T ss_pred ccccCCceEEEEeecccccccCCCC-CcchhhhhHHHHHHHHH
Confidence 5555567899988754322111122 23457777777766555
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-11 Score=94.97 Aligned_cols=140 Identities=16% Similarity=0.107 Sum_probs=90.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Ccc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|+||++++++|+++|++|++..|+.... ... ...++.++.+|+++++++++.++..
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~-------- 79 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTA-------- 79 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH--------
Confidence 6899999999999999999999999998888854321 111 1234667788888887777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~ 139 (189)
.+.++++|++|+++|....... ..+|+.+. +.+++.+
T Consensus 80 ----------------------------~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~ 131 (261)
T PRK08936 80 ----------------------------VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYF 131 (261)
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2334567888888876433211 13454443 4556666
Q ss_pred HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+ .+++|++||....... +....|...|.+.+.+.+
T Consensus 132 ~~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~ 170 (261)
T PRK08936 132 VEHDIKGNIINMSSVHEQIPW----PLFVHYAASKGGVKLMTE 170 (261)
T ss_pred HhcCCCcEEEEEccccccCCC----CCCcccHHHHHHHHHHHH
Confidence 6654 4689999997654321 223356666665554443
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-11 Score=94.85 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=89.4
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++||||+|+||.+++++|+++|++|++++|+.+. .... ...++.++.+|+++++++.++++..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~---------- 70 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEAD---------- 70 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH----------
Confidence 5899999999999999999999999998876432 1111 1245778888888888877766432
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH-----H
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM-----K 140 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~-----~ 140 (189)
.+..++.|.+++++|...... ..++|+.++.++++++ +
T Consensus 71 --------------------------~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (239)
T TIGR01831 71 --------------------------IAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIR 124 (239)
T ss_pred --------------------------HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 233445788888877543221 1236677777776654 3
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
+.+.+++|++||..+....+ ....|...|...+.+
T Consensus 125 ~~~~~~iv~vsS~~~~~~~~----~~~~Y~~sK~a~~~~ 159 (239)
T TIGR01831 125 ARQGGRIITLASVSGVMGNR----GQVNYSAAKAGLIGA 159 (239)
T ss_pred hcCCeEEEEEcchhhccCCC----CCcchHHHHHHHHHH
Confidence 34557999999977654322 223466666554433
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.7e-12 Score=110.36 Aligned_cols=140 Identities=15% Similarity=0.103 Sum_probs=94.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+.+...... ...+..+.+|++++++++++++..
T Consensus 415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i------- 487 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV------- 487 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH-------
Confidence 68999999999999999999999999999999865443210 123556778888887777766532
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~ 138 (189)
.+.++++|++|+++|.....+. .++|..+. +.+++.
T Consensus 488 -----------------------------~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~ 538 (676)
T TIGR02632 488 -----------------------------ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQ 538 (676)
T ss_pred -----------------------------HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345578999999886442211 12344443 345566
Q ss_pred HHHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+ .+++|++||..+.... +....|..+|...+.+.+
T Consensus 539 m~~~~~~g~IV~iSS~~a~~~~----~~~~aY~aSKaA~~~l~r 578 (676)
T TIGR02632 539 MREQGLGGNIVFIASKNAVYAG----KNASAYSAAKAAEAHLAR 578 (676)
T ss_pred HHhcCCCCEEEEEeChhhcCCC----CCCHHHHHHHHHHHHHHH
Confidence 66654 4689999997765432 223457777777766655
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.3e-12 Score=96.87 Aligned_cols=63 Identities=17% Similarity=0.111 Sum_probs=50.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHhhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKAIE 64 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~ 64 (189)
|+++||||+|++|+++++.|+++|++|+++.|+++++.... ..++.++.+|++++++++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 64 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARG 64 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHH
Confidence 37999999999999999999999999999999866544321 1245678889988888777665
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-11 Score=95.48 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=89.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-c---------cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-E---------YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
|+++||||+|+||+++++.|+++|++|+++.++.....+ . .+.++.++++|++++++++++++.+
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~----- 83 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA----- 83 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH-----
Confidence 589999999999999999999999997777665432111 0 1235667777777777777666543
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK 140 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~ 140 (189)
.+.+++.|++|+++|...... ..++|..++..+++++.
T Consensus 84 -------------------------------~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~ 132 (257)
T PRK12744 84 -------------------------------KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAG 132 (257)
T ss_pred -------------------------------HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 233456889999988633211 12367778777777775
Q ss_pred HC--CccEEEEe-ccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EY--NVSVVSVC-LSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~--~~~~~i~i-SS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.. ..++++++ ||..+.. .+....|..+|...+.+.+
T Consensus 133 ~~~~~~~~iv~~~ss~~~~~-----~~~~~~Y~~sK~a~~~~~~ 171 (257)
T PRK12744 133 RHLNDNGKIVTLVTSLLGAF-----TPFYSAYAGSKAPVEHFTR 171 (257)
T ss_pred HhhccCCCEEEEecchhccc-----CCCcccchhhHHHHHHHHH
Confidence 42 12456655 4443321 1223457777877776665
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.6e-11 Score=93.13 Aligned_cols=140 Identities=18% Similarity=0.157 Sum_probs=88.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccccC--hhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDVLK--LADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~ 72 (189)
++++||||+|++|++++++|+++|++|++++|+++...... .....++.+|+.+ .+++.++++
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 78 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAA-------- 78 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHH--------
Confidence 68999999999999999999999999999999875443210 1234455666654 233333332
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~ 139 (189)
.+.+.+ .++|++|+++|...... ..++|+.+..++++.+
T Consensus 79 ----------------------------~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~ 130 (239)
T PRK08703 79 ----------------------------TIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRAL 130 (239)
T ss_pred ----------------------------HHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHH
Confidence 122233 56799999988542211 1246777755555544
Q ss_pred ----HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ----KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ----~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+.++++++||..+.... +....|..+|...+.+.+
T Consensus 131 ~~~~~~~~~~~iv~~ss~~~~~~~----~~~~~Y~~sKaa~~~~~~ 172 (239)
T PRK08703 131 FPLLKQSPDASVIFVGESHGETPK----AYWGGFGASKAALNYLCK 172 (239)
T ss_pred HHHHHhCCCCEEEEEeccccccCC----CCccchHHhHHHHHHHHH
Confidence 45556799999887654321 123457777777766654
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.6e-11 Score=115.08 Aligned_cols=154 Identities=15% Similarity=0.143 Sum_probs=104.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC----CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG----LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++|+|||+|||+|++++++|++++ ++|+++.|........ +.+...+...
T Consensus 972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~---------------~~l~~~~~~~----------- 1025 (1389)
T TIGR03443 972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL---------------ERLRKTGTTY----------- 1025 (1389)
T ss_pred ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH---------------HHHHHHHHHh-----------
Confidence 589999999999999999999886 7899999975432211 0111111100
Q ss_pred CCCCCccccCceeEEecccc------CHHHHHHHhcCCCEEEEeeccCCCCCCc----ceehhhHHHHHHHHHHCCccEE
Q psy3626 78 PQRLPSEYHSKVEIIQGDVL------KLADVKKAIEGKDGVVVALGTRNDLSPT----TVMSEGMKNIVTAMKEYNVSVV 147 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~vv~~~~~~~~~~~~----~~~~~~~~~ll~~~~~~~~~~~ 147 (189)
..+..++..++.++.+|+. +.+...+...++|+|||+++......+. ..|+.++.++++.|.+.+.++|
T Consensus 1026 -~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~ 1104 (1389)
T TIGR03443 1026 -GIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQF 1104 (1389)
T ss_pred -CCCchhhhcceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceE
Confidence 0011223346777777775 3455667778899999999876544332 3689999999999999888999
Q ss_pred EEeccceeecCC--------------CCCC----------CCCccchhhHHHHHHHhhh
Q psy3626 148 SVCLSAFLFYEP--------------SKVP----------PMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 148 i~iSS~~~~~~~--------------~~~p----------~~~~~~~~~~~~~~~~l~~ 182 (189)
+|+||..++... ...+ .....|..+|+..|..+.+
T Consensus 1105 v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~ 1163 (1389)
T TIGR03443 1105 SFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIRE 1163 (1389)
T ss_pred EEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHH
Confidence 999998776320 0011 1123477888888888763
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-11 Score=93.09 Aligned_cols=131 Identities=17% Similarity=0.088 Sum_probs=85.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|++.... ..++.++.+|++++ +++
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~--~~~-------------------- 60 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNFHFLQLDLSDD--LEP-------------------- 60 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcEEEEECChHHH--HHH--------------------
Confidence 58999999999999999999999999999998754321 24466677777665 222
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC---CC---------CcceehhhHHHHHHHH----HHCCcc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND---LS---------PTTVMSEGMKNIVTAM----KEYNVS 145 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~---~~---------~~~~~~~~~~~ll~~~----~~~~~~ 145 (189)
+.+.++++|++|+++|.... .. ..++|..++.++++++ ++.+.+
T Consensus 61 --------------------~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 120 (235)
T PRK06550 61 --------------------LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG 120 (235)
T ss_pred --------------------HHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc
Confidence 22334456777777764211 10 1235677766666655 345557
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..+....+ ....|...|...+.+.+
T Consensus 121 ~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 152 (235)
T PRK06550 121 IIINMCSIASFVAGG----GGAAYTASKHALAGFTK 152 (235)
T ss_pred EEEEEcChhhccCCC----CCcccHHHHHHHHHHHH
Confidence 999999987654322 23346667766655444
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-11 Score=95.17 Aligned_cols=136 Identities=15% Similarity=0.076 Sum_probs=87.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|||++|++|+++++.|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 78 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE--------- 78 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986544321 123456677777777766555432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~ 139 (189)
++++|++|+++|.....+. .++|+.+... +++.+
T Consensus 79 -------------------------------~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 127 (259)
T PRK06125 79 -------------------------------AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRM 127 (259)
T ss_pred -------------------------------hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2356778887775432111 1245555444 44555
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+... ...+..|...|.....+.+
T Consensus 128 ~~~~~g~iv~iss~~~~~~----~~~~~~y~ask~al~~~~~ 165 (259)
T PRK06125 128 KARGSGVIVNVIGAAGENP----DADYICGSAGNAALMAFTR 165 (259)
T ss_pred HHcCCcEEEEecCccccCC----CCCchHhHHHHHHHHHHHH
Confidence 6665568999988765431 1223344556666554444
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=98.25 Aligned_cols=143 Identities=13% Similarity=0.007 Sum_probs=90.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC----------Ccc------cCCceeEEeccccChhHHHHhhhc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL----------PSE------YHSKVEIIQGDVLKLADVKKAIEG 65 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~----------~~~------~~~~~~~~~~d~~~~~~~~~~~~~ 65 (189)
|+++||||+++||+++++.|+++|++|++++|+.... ... ...++.++.+|++++++++++++.
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 88 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER 88 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 5899999999999999999999999999999975321 110 012355677777777777766643
Q ss_pred CcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEee-ccCC----CCCC-----------cceeh
Q psy3626 66 KDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVAL-GTRN----DLSP-----------TTVMS 129 (189)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~-~~~~----~~~~-----------~~~~~ 129 (189)
+ .+.+++.|++|+++ |... ..+. .++|+
T Consensus 89 ~------------------------------------~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~ 132 (305)
T PRK08303 89 I------------------------------------DREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAI 132 (305)
T ss_pred H------------------------------------HHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhh
Confidence 2 33456788999988 6321 0111 12344
Q ss_pred hh----HHHHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 130 EG----MKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 130 ~~----~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+ ++.+++.+++.+.++||++||..+....... .....|..+|.....+.+
T Consensus 133 ~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~-~~~~~Y~asKaal~~lt~ 187 (305)
T PRK08303 133 DTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHY-RLSVFYDLAKTSVNRLAF 187 (305)
T ss_pred HHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCC-CCcchhHHHHHHHHHHHH
Confidence 44 4455566655555799999986543221111 123346667776665554
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.9e-11 Score=93.59 Aligned_cols=137 Identities=13% Similarity=0.090 Sum_probs=91.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||++.+|++++++|.++|++|++..|+++.+++.. ...+..+.+|++++++++++++..
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 76 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAI--------- 76 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHH---------
Confidence 58999999999999999999999999999999876654321 234667788888888887776532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhc-CCCEEEEeeccCCCC-C----Cc-------ceehhh----HHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE-GKDGVVVALGTRNDL-S----PT-------TVMSEG----MKNIVTA 138 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vv~~~~~~~~~-~----~~-------~~~~~~----~~~ll~~ 138 (189)
.+.++ +.|++|+++|..... . +. ..|..+ .+.+++.
T Consensus 77 ---------------------------~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (227)
T PRK08862 77 ---------------------------EQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAER 129 (227)
T ss_pred ---------------------------HHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34455 788999998743211 1 10 122222 3344555
Q ss_pred HHHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+ .+.+|++||..+. + .+..|...|.....+.+
T Consensus 130 m~~~~~~g~Iv~isS~~~~------~-~~~~Y~asKaal~~~~~ 166 (227)
T PRK08862 130 MRKRNKKGVIVNVISHDDH------Q-DLTGVESSNALVSGFTH 166 (227)
T ss_pred HHhcCCCceEEEEecCCCC------C-CcchhHHHHHHHHHHHH
Confidence 65543 4699999986532 1 13346666766665554
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-11 Score=94.87 Aligned_cols=138 Identities=23% Similarity=0.252 Sum_probs=87.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++||||+|++|.++++.|+++|++|++++|+++..+.+ ...++.++.+|++++++++++++..
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---------- 75 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKA---------- 75 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHH----------
Confidence 4899999999999999999999999999999987654322 1135678888998888887777543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---------cceehhhHHHHHHHHHHC--Ccc
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---------TTVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---------~~~~~~~~~~ll~~~~~~--~~~ 145 (189)
...+++.|.+++++|....... .+.|..+...+++.+... ..+
T Consensus 76 --------------------------~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (238)
T PRK05786 76 --------------------------AKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGS 129 (238)
T ss_pred --------------------------HHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCC
Confidence 2223456777777765432211 123444444444433221 125
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHH
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYN 178 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~ 178 (189)
++|++||..+.... . .....|..+|...+.
T Consensus 130 ~iv~~ss~~~~~~~--~-~~~~~Y~~sK~~~~~ 159 (238)
T PRK05786 130 SIVLVSSMSGIYKA--S-PDQLSYAVAKAGLAK 159 (238)
T ss_pred EEEEEecchhcccC--C-CCchHHHHHHHHHHH
Confidence 89999887653211 1 123346666655543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.8e-11 Score=98.11 Aligned_cols=119 Identities=16% Similarity=0.102 Sum_probs=83.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+++||.++++.|+++| ++|++.+|+.+...+. ...++.++.+|++++++++++++..
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~-------- 75 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQF-------- 75 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHH--------
Confidence 479999999999999999999999 9999999986544321 1234667788888888877766542
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------C------CcceehhhH----HHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------S------PTTVMSEGM----KNIVTA 138 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~------~~~~~~~~~----~~ll~~ 138 (189)
.+..++.|++|+++|...+. . ..++|..+. +.+++.
T Consensus 76 ----------------------------~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~ 127 (314)
T TIGR01289 76 ----------------------------RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDD 127 (314)
T ss_pred ----------------------------HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 22345688899998853221 0 024666664 445666
Q ss_pred HHHCC--ccEEEEeccceee
Q psy3626 139 MKEYN--VSVVSVCLSAFLF 156 (189)
Q Consensus 139 ~~~~~--~~~~i~iSS~~~~ 156 (189)
+++.+ .++||++||..+.
T Consensus 128 m~~~~~~~g~IV~vsS~~~~ 147 (314)
T TIGR01289 128 LKNSPNKDKRLIIVGSITGN 147 (314)
T ss_pred HHhCCCCCCeEEEEecCccc
Confidence 66553 4699999998664
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.2e-11 Score=93.92 Aligned_cols=117 Identities=17% Similarity=0.186 Sum_probs=86.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc----------cCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE----------YHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
||+.+|||-||+-|++|++.|++.||+|.++.|+.+..... .+.++..+.+|++|...+.++++.++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~--- 78 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ--- 78 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC---
Confidence 57899999999999999999999999999999985433221 12346677777777777777776652
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----C--CcceehhhHHHHHHHHHHCC
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----S--PTTVMSEGMKNIVTAMKEYN 143 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~--~~~~~~~~~~~ll~~~~~~~ 143 (189)
+|-|++.++++... + ..+++..|+.+++++.+..+
T Consensus 79 --------------------------------------PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~ 120 (345)
T COG1089 79 --------------------------------------PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG 120 (345)
T ss_pred --------------------------------------chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhC
Confidence 46677776655422 2 23467778999999999876
Q ss_pred c--cEEEEeccceeecC
Q psy3626 144 V--SVVSVCLSAFLFYE 158 (189)
Q Consensus 144 ~--~~~i~iSS~~~~~~ 158 (189)
. -||..-||+..++.
T Consensus 121 ~~~~rfYQAStSE~fG~ 137 (345)
T COG1089 121 EKKTRFYQASTSELYGL 137 (345)
T ss_pred CcccEEEecccHHhhcC
Confidence 4 48888888877765
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.2e-11 Score=91.12 Aligned_cols=124 Identities=21% Similarity=0.168 Sum_probs=85.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|++|++++++|.++ ++|++++|++. .+++|++++++++..++..
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--------------- 53 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--------------- 53 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc---------------
Confidence 48999999999999999999999 99999998753 3678999998887776532
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC--CccEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY--NVSVVS 148 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~--~~~~~i 148 (189)
+++|++|+++|....... .++|..+..++++++... +.++++
T Consensus 54 -------------------------~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 108 (199)
T PRK07578 54 -------------------------GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFT 108 (199)
T ss_pred -------------------------CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 346777777775332111 135666666777665431 236899
Q ss_pred EeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 149 VCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 149 ~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++||..+... . +....|...|...+.+.+
T Consensus 109 ~iss~~~~~~---~-~~~~~Y~~sK~a~~~~~~ 137 (199)
T PRK07578 109 LTSGILSDEP---I-PGGASAATVNGALEGFVK 137 (199)
T ss_pred EEcccccCCC---C-CCchHHHHHHHHHHHHHH
Confidence 9988775432 1 233356666766665544
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=105.27 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=97.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||++++++|+++|++|++++|+++.+..+ ...+..++.+|++++++++++++..
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 73 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQL------------ 73 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHH------------
Confidence 5799999999999999999999999999999987655432 1245667889999998888877543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--C-----------CcceehhhHHHHHH----HHHH
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--S-----------PTTVMSEGMKNIVT----AMKE 141 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~-----------~~~~~~~~~~~ll~----~~~~ 141 (189)
.+.+++.|++|+++|...+. + ..++|+.++..+.+ .+++
T Consensus 74 ------------------------~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 129 (520)
T PRK06484 74 ------------------------HREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIE 129 (520)
T ss_pred ------------------------HHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 34456789999998863210 0 12356666555444 4444
Q ss_pred CCcc-EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVS-VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~-~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+ ++|++||..+....+ ....|...|...+.+.+
T Consensus 130 ~~~g~~iv~isS~~~~~~~~----~~~~Y~asKaal~~l~~ 166 (520)
T PRK06484 130 QGHGAAIVNVASGAGLVALP----KRTAYSASKAAVISLTR 166 (520)
T ss_pred cCCCCeEEEECCcccCCCCC----CCchHHHHHHHHHHHHH
Confidence 4444 999999987754322 23356667777665544
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.4e-11 Score=94.69 Aligned_cols=140 Identities=9% Similarity=0.016 Sum_probs=90.7
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCC---Ccc----cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRL---PSE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~---~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+ +.||++++++|+++|++|++..|+.... .++ ...++.++.+|++++++++++++..
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~------ 81 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETI------ 81 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH------
Confidence 579999997 8999999999999999999988753221 111 1245677888998888887777542
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CCC-----------cceehhhHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~~-----------~~~~~~~~~~ll~ 137 (189)
.+.+++.|++|+++|.... .+. .++|..+...+.+
T Consensus 82 ------------------------------~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (257)
T PRK08594 82 ------------------------------KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAR 131 (257)
T ss_pred ------------------------------HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHH
Confidence 3445678899998875421 111 1244455444333
Q ss_pred HHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+... ..+++|++||..+.... +.+..|..+|.....+.+
T Consensus 132 ~~~~~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~ 173 (257)
T PRK08594 132 EAKKLMTEGGSIVTLTYLGGERVV----QNYNVMGVAKASLEASVK 173 (257)
T ss_pred HHHHhcccCceEEEEcccCCccCC----CCCchhHHHHHHHHHHHH
Confidence 33221 13689999998764321 223456777777766555
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.6e-11 Score=95.09 Aligned_cols=148 Identities=18% Similarity=0.043 Sum_probs=104.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---------CCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---------HSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|.++|||++.+||++++.+|.+.|.+|++.+|+++...... ..++..+.+|++++++.+++.+..
T Consensus 9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~------ 82 (270)
T KOG0725|consen 9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA------ 82 (270)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH------
Confidence 68999999999999999999999999999999987654321 245778888998888877776543
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-C-----------cceehhh-HHH----H
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-P-----------TTVMSEG-MKN----I 135 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-~-----------~~~~~~~-~~~----l 135 (189)
+.+.+++.|++++++|...... . ..+|+.| +.. +
T Consensus 83 -----------------------------~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a 133 (270)
T KOG0725|consen 83 -----------------------------VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAA 133 (270)
T ss_pred -----------------------------HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHH
Confidence 3344678999999999766442 1 1256663 222 3
Q ss_pred HHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhhcCCCC
Q psy3626 136 VTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSGLNY 187 (189)
Q Consensus 136 l~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~ 187 (189)
.+.+++.+.+.++++||..+.... .+.+ ..|..+|..++++.+....+|
T Consensus 134 ~~~~~~~~gg~I~~~ss~~~~~~~--~~~~-~~Y~~sK~al~~ltr~lA~El 182 (270)
T KOG0725|consen 134 RPMLKKSKGGSIVNISSVAGVGPG--PGSG-VAYGVSKAALLQLTRSLAKEL 182 (270)
T ss_pred HHHHHhcCCceEEEEeccccccCC--CCCc-ccchhHHHHHHHHHHHHHHHH
Confidence 334445566789998888765431 2221 457778888888877554443
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.31 E-value=3e-11 Score=94.47 Aligned_cols=144 Identities=11% Similarity=-0.019 Sum_probs=88.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
+.++||||+|+||++++++|+++|++|+++.|+ ++.+..+ ...++.++.+|+++++++.+.++..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~------- 74 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAI------- 74 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHH-------
Confidence 579999999999999999999999999988764 3332211 1234556788888887654443321
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----C-----------------cceehhh
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----P-----------------TTVMSEG 131 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~-----------------~~~~~~~ 131 (189)
.+.+.+.++++|++|+++|.....+ . .++|..+
T Consensus 75 -------------------------~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~ 129 (267)
T TIGR02685 75 -------------------------IDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIA 129 (267)
T ss_pred -------------------------HHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHH
Confidence 0112234456788888887532211 0 2355556
Q ss_pred HHHHHHHHH----HC------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 132 MKNIVTAMK----EY------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 132 ~~~ll~~~~----~~------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
...+++++. .. ...+++.+||..+... .+....|..+|..++.+.+
T Consensus 130 ~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~----~~~~~~Y~asK~a~~~~~~ 185 (267)
T TIGR02685 130 PYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQP----LLGFTMYTMAKHALEGLTR 185 (267)
T ss_pred HHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCC----CcccchhHHHHHHHHHHHH
Confidence 555555432 21 1246888877665321 1234467778887776665
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-10 Score=90.96 Aligned_cols=140 Identities=8% Similarity=-0.056 Sum_probs=87.0
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCC-----------c----c--cCCceeEEeccccChhHHHHh
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLP-----------S----E--YHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~-----------~----~--~~~~~~~~~~d~~~~~~~~~~ 62 (189)
++++||||+| +||++++++|+++|++|++..|...... . . .+.++.++.+|++++++++++
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~ 86 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKEL 86 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 5899999995 8999999999999999988765321100 0 0 012345556666666655555
Q ss_pred hhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh
Q psy3626 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG 131 (189)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~ 131 (189)
++.. .+.+++.|++|+++|.....+. .++|..+
T Consensus 87 ~~~~------------------------------------~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 130 (256)
T PRK12859 87 LNKV------------------------------------TEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRA 130 (256)
T ss_pred HHHH------------------------------------HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 5322 2334567999999886432211 2256665
Q ss_pred H----HHHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 132 M----KNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 132 ~----~~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. +.+++.+++.+.++||++||..+.... +.+..|...|...+.+.+
T Consensus 131 ~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~ 180 (256)
T PRK12859 131 TTLLSSQFARGFDKKSGGRIINMTSGQFQGPM----VGELAYAATKGAIDALTS 180 (256)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcccccCCCC----CCchHHHHHHHHHHHHHH
Confidence 4 344566666656799999998764321 233456667766655544
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=98.96 Aligned_cols=138 Identities=16% Similarity=0.188 Sum_probs=86.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccC--hhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLK--LADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~ 71 (189)
+.++||||+|+||++++++|+++|++|++++|+++.+++.. ..++..+.+|+++ .+.+
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~------------ 121 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGV------------ 121 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHH------------
Confidence 57999999999999999999999999999999876544221 1234445555542 1111
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCC--C-----------CcceehhhHHH--
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDL--S-----------PTTVMSEGMKN-- 134 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~--~-----------~~~~~~~~~~~-- 134 (189)
+.+.+.+++ +|++|+++|..... . ..++|+.++..
T Consensus 122 ----------------------------~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 173 (320)
T PLN02780 122 ----------------------------KRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVT 173 (320)
T ss_pred ----------------------------HHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHH
Confidence 122233333 45888888864321 0 12356666544
Q ss_pred --HHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 135 --IVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 --ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+.+.+++|++||..+...+ .. +....|..+|...+.+.+
T Consensus 174 ~~~lp~m~~~~~g~IV~iSS~a~~~~~-~~-p~~~~Y~aSKaal~~~~~ 220 (320)
T PLN02780 174 QAVLPGMLKRKKGAIINIGSGAAIVIP-SD-PLYAVYAATKAYIDQFSR 220 (320)
T ss_pred HHHHHHHHhcCCcEEEEEechhhccCC-CC-ccchHHHHHHHHHHHHHH
Confidence 4555666677899999998775311 11 234457777777665544
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-11 Score=92.01 Aligned_cols=139 Identities=16% Similarity=0.079 Sum_probs=88.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|..+++.|+++|++|++++|++...... ...++.++.+|++++++++++++..
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 76 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQI--------- 76 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH---------
Confidence 4799999999999999999999999999999986544321 1235677888888887777666543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------------------CcceehhhHHH-
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------------------PTTVMSEGMKN- 134 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------------------~~~~~~~~~~~- 134 (189)
.+..++.|++|+++|...... ..+.|+.+...
T Consensus 77 ---------------------------~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 129 (253)
T PRK08217 77 ---------------------------AEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLC 129 (253)
T ss_pred ---------------------------HHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHH
Confidence 122345677777776432110 01245555443
Q ss_pred ---HHHHHHHC-CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 135 ---IVTAMKEY-NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 ---ll~~~~~~-~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+. ..++++++||...+.. +....|..+|...+.+++
T Consensus 130 ~~~~~~~l~~~~~~~~iv~~ss~~~~~~-----~~~~~Y~~sK~a~~~l~~ 175 (253)
T PRK08217 130 GREAAAKMIESGSKGVIINISSIARAGN-----MGQTNYSASKAGVAAMTV 175 (253)
T ss_pred HHHHHHHHHhcCCCeEEEEEccccccCC-----CCCchhHHHHHHHHHHHH
Confidence 34444444 3357888888754432 223457777766655544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.5e-11 Score=95.29 Aligned_cols=138 Identities=14% Similarity=0.089 Sum_probs=91.2
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCC---CcccC--CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRL---PSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~---~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||++ +||++++++|+++|++|++.+|+.... .++.. .....+++|++++++++++++..
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~-------- 79 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEAL-------- 79 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHH--------
Confidence 5799999997 999999999999999999988864211 11110 12346788999888888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----C-----------CcceehhhHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----S-----------PTTVMSEGMKNIV--- 136 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~-----------~~~~~~~~~~~ll--- 136 (189)
.+.+++.|++|+++|..... + ...+|..+..++.
T Consensus 80 ----------------------------~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~ 131 (271)
T PRK06505 80 ----------------------------EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRA 131 (271)
T ss_pred ----------------------------HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHH
Confidence 34556789999998864321 0 0235666554444
Q ss_pred -HHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 -TAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 -~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++ + +++|++||..+... . +.+..|..+|.....+.+
T Consensus 132 ~~~m~~-~-G~Iv~isS~~~~~~---~-~~~~~Y~asKaAl~~l~r 171 (271)
T PRK06505 132 AKLMPD-G-GSMLTLTYGGSTRV---M-PNYNVMGVAKAALEASVR 171 (271)
T ss_pred HHhhcc-C-ceEEEEcCCCcccc---C-CccchhhhhHHHHHHHHH
Confidence 44432 3 68999999865432 1 234457777777766555
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.1e-11 Score=94.97 Aligned_cols=137 Identities=17% Similarity=0.109 Sum_probs=90.5
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCC---CCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQ---RLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~---~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+ ++||+++++.|+++|++|++.+|+.. ...++ .... ..+++|++++++++++++.+
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i------- 77 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESL------- 77 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHH-------
Confidence 689999997 79999999999999999999988742 11111 1122 56788999988888777543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNI--- 135 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~l--- 135 (189)
.+.+++.|++|+++|.... .+ ..++|+.+...+
T Consensus 78 -----------------------------~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 128 (274)
T PRK08415 78 -----------------------------KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRA 128 (274)
T ss_pred -----------------------------HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHH
Confidence 3445678999999886421 10 124666665444
Q ss_pred -HHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 136 -VTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 136 -l~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+++. +++|++||..+... .| .+..|..+|.....+.+
T Consensus 129 ~~p~m~~~--g~Iv~isS~~~~~~---~~-~~~~Y~asKaal~~l~~ 169 (274)
T PRK08415 129 LLPLLNDG--ASVLTLSYLGGVKY---VP-HYNVMGVAKAALESSVR 169 (274)
T ss_pred HHHHhccC--CcEEEEecCCCccC---CC-cchhhhhHHHHHHHHHH
Confidence 4444432 58999998765432 11 23356667777665554
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=93.87 Aligned_cols=141 Identities=11% Similarity=0.081 Sum_probs=97.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecC-----CCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRD-----PQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~-----~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||.||||++.+..+... .++.+.++.= ...+.+. ..++-+++..|+.+...+...+..-
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~------- 79 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETE------- 79 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccC-------
Confidence 57999999999999999999876 6666666432 1111110 1233444445544444433333211
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHC-Ccc
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEY-NVS 145 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~-~~~ 145 (189)
..|.++|.++..... .....|+.++..|+++++.. +++
T Consensus 80 ----------------------------------~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~ 125 (331)
T KOG0747|consen 80 ----------------------------------EIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIR 125 (331)
T ss_pred ----------------------------------chhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCee
Confidence 367777777755432 22357899999999999998 699
Q ss_pred EEEEeccceeecCCC--------CCCCCCccchhhHHHHHHHhhhc
Q psy3626 146 VVSVCLSAFLFYEPS--------KVPPMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~--------~~p~~~~~~~~~~~~~~~~l~~~ 183 (189)
+|||+||+.+|++.. ..|.+.+||...|.++|..++..
T Consensus 126 ~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy 171 (331)
T KOG0747|consen 126 RFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSY 171 (331)
T ss_pred EEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHH
Confidence 999999999998732 35678899999999999988743
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-11 Score=95.52 Aligned_cols=138 Identities=12% Similarity=0.065 Sum_probs=90.7
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCC------Cccc--CCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRL------PSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~------~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
|+++||||+ +.||++++++|+++|++|++..|+.+.. .++. .....++.+|++++++++++++..
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----- 81 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI----- 81 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH-----
Confidence 579999986 7999999999999999998876653311 1111 123557788888888887777543
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC------C---------CCcceehhhHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND------L---------SPTTVMSEGMKNIV 136 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~------~---------~~~~~~~~~~~~ll 136 (189)
.+.+++.|++|+++|.... . ...++|..+...+.
T Consensus 82 -------------------------------~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~ 130 (258)
T PRK07370 82 -------------------------------KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLC 130 (258)
T ss_pred -------------------------------HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHH
Confidence 3445678999999885421 1 11246777755544
Q ss_pred H----HHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 T----AMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 ~----~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .+++ + +++|++||..+... . +.+..|..+|...+.+.+
T Consensus 131 ~~~~~~m~~-~-g~Iv~isS~~~~~~---~-~~~~~Y~asKaal~~l~~ 173 (258)
T PRK07370 131 KAAKPLMSE-G-GSIVTLTYLGGVRA---I-PNYNVMGVAKAALEASVR 173 (258)
T ss_pred HHHHHHHhh-C-CeEEEEeccccccC---C-cccchhhHHHHHHHHHHH
Confidence 4 4443 2 68999999765432 1 233456777777766555
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.8e-11 Score=91.99 Aligned_cols=68 Identities=28% Similarity=0.248 Sum_probs=47.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcccCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
++++||||+|+||++++++|+++|++|++++|++. ............+.+|+++.+++++.+...|.+
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDil 83 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVL 83 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEE
Confidence 68999999999999999999999999999998762 211111111245677777776655444433333
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.5e-11 Score=92.40 Aligned_cols=139 Identities=15% Similarity=0.126 Sum_probs=89.0
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecCCCC---CCccc--CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRDPQR---LPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~~~---~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|||| +++||++++++|+++|++|++..|.... ..++. ......+++|++++++++++++.+
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------- 78 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADL-------- 78 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHH--------
Confidence 57999997 6799999999999999999988765321 11111 123456788998888888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----C-----C-------cceehhhHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----S-----P-------TTVMSEGMKN---- 134 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~-----~-------~~~~~~~~~~---- 134 (189)
.+.+++.|++|+++|..... + + .++|+.+...
T Consensus 79 ----------------------------~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~ 130 (261)
T PRK08690 79 ----------------------------GKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKA 130 (261)
T ss_pred ----------------------------HHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHH
Confidence 34456788999998864321 0 0 1245555433
Q ss_pred HHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 135 IVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+++.+ +++|++||..+.... +.+..|..+|...+.+.+
T Consensus 131 ~~p~m~~~~-g~Iv~iss~~~~~~~----~~~~~Y~asKaal~~l~~ 172 (261)
T PRK08690 131 ARPMMRGRN-SAIVALSYLGAVRAI----PNYNVMGMAKASLEAGIR 172 (261)
T ss_pred HHHHhhhcC-cEEEEEcccccccCC----CCcccchhHHHHHHHHHH
Confidence 344444433 689999887765321 233456677777665544
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-10 Score=86.78 Aligned_cols=134 Identities=15% Similarity=0.072 Sum_probs=98.3
Q ss_pred ceEEEEcC-CChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGA-TGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGa-tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
++|+|||. .|+||.++++.|.++|+.|.+..|+.+.+..+. +.++..+..|+++++++.+.......
T Consensus 8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~----------- 76 (289)
T KOG1209|consen 8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA----------- 76 (289)
T ss_pred CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh-----------
Confidence 56888774 699999999999999999999999999998875 67899999999999988877654310
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhH----HHHHHHHHHCCc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGM----KNIVTAMKEYNV 144 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~----~~ll~~~~~~~~ 144 (189)
-..+..|.+++++|.....+ ++.+|+-|. +.+.+.+.+++
T Consensus 77 ------------------------~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK- 131 (289)
T KOG1209|consen 77 ------------------------NPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK- 131 (289)
T ss_pred ------------------------CCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-
Confidence 12346789999999766443 344666664 44444444554
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHH
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRM 176 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~ 176 (189)
+.+|+++|..++- |.++...|...+++
T Consensus 132 GtIVnvgSl~~~v-----pfpf~~iYsAsKAA 158 (289)
T KOG1209|consen 132 GTIVNVGSLAGVV-----PFPFGSIYSASKAA 158 (289)
T ss_pred ceEEEecceeEEe-----ccchhhhhhHHHHH
Confidence 5899999988764 45555555554443
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.6e-11 Score=95.37 Aligned_cols=117 Identities=18% Similarity=0.099 Sum_probs=79.2
Q ss_pred Cc-eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MK-KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~-~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+ +++|||+ |+||++++++|. +|++|++++|+++..... ...++.++.+|+++++++.++++..
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~------- 71 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA------- 71 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-------
Confidence 55 4678886 799999999996 899999999986544321 1234667788888887777666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcceehhhHHHHHHHHHHC--CccEE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTTVMSEGMKNIVTAMKEY--NVSVV 147 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~--~~~~~ 147 (189)
+.+++.|++|+++|..... ...++|..++.++++.+... ..+++
T Consensus 72 ------------------------------~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~i 121 (275)
T PRK06940 72 ------------------------------QTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAG 121 (275)
T ss_pred ------------------------------HhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCE
Confidence 1235689999999865322 12357888877777766432 11456
Q ss_pred EEeccceee
Q psy3626 148 SVCLSAFLF 156 (189)
Q Consensus 148 i~iSS~~~~ 156 (189)
|++||..+.
T Consensus 122 v~isS~~~~ 130 (275)
T PRK06940 122 VVIASQSGH 130 (275)
T ss_pred EEEEecccc
Confidence 777877654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.8e-11 Score=99.12 Aligned_cols=140 Identities=16% Similarity=0.031 Sum_probs=94.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC--CCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR--LPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||..++++|.++|++|++++|+... +..+ ...+..++.+|++++++++++++..
T Consensus 211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~------------ 278 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHL------------ 278 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHH------------
Confidence 579999999999999999999999999999885321 1111 1123457788888888777766432
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC----C
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY----N 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~----~ 143 (189)
.+..+++|++||++|...... ...+|+.++.++.+++... .
T Consensus 279 ------------------------~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 334 (450)
T PRK08261 279 ------------------------AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD 334 (450)
T ss_pred ------------------------HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC
Confidence 233456899999988654321 1237788888888877653 2
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..+....+ ....|...|...+.+++
T Consensus 335 ~g~iv~~SS~~~~~g~~----~~~~Y~asKaal~~~~~ 368 (450)
T PRK08261 335 GGRIVGVSSISGIAGNR----GQTNYAASKAGVIGLVQ 368 (450)
T ss_pred CCEEEEECChhhcCCCC----CChHHHHHHHHHHHHHH
Confidence 36999999987654322 23346666665544443
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.3e-11 Score=89.69 Aligned_cols=106 Identities=17% Similarity=0.105 Sum_probs=79.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++|+||+|++|. +++.|.++|++|++..|+++....+. ..++.++.+|+.++++++++++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~---------- 69 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKST---------- 69 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHH----------
Confidence 57999999988775 99999999999999999865543321 235677888999998888887654
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCcc----EEEEecc
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVS----VVSVCLS 152 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~----~~i~iSS 152 (189)
.+..++.|.+|..+ .+.+.+++..+|++.+++ +++|+=+
T Consensus 70 --------------------------l~~~g~id~lv~~v-----------h~~~~~~~~~~~~~~gv~~~~~~~~h~~g 112 (177)
T PRK08309 70 --------------------------IEKNGPFDLAVAWI-----------HSSAKDALSVVCRELDGSSETYRLFHVLG 112 (177)
T ss_pred --------------------------HHHcCCCeEEEEec-----------cccchhhHHHHHHHHccCCCCceEEEEeC
Confidence 22234567777653 566789999999999988 8998754
Q ss_pred cee
Q psy3626 153 AFL 155 (189)
Q Consensus 153 ~~~ 155 (189)
+.+
T Consensus 113 s~~ 115 (177)
T PRK08309 113 SAA 115 (177)
T ss_pred CcC
Confidence 443
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.5e-11 Score=93.73 Aligned_cols=140 Identities=9% Similarity=-0.027 Sum_probs=90.3
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCC---Cccc--CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRL---PSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~---~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+ +.||++++++|+++|++|++.+|+.... .++. .....++.+|++++++++++++..
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-------- 82 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARI-------- 82 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHH--------
Confidence 579999998 5999999999999999999998875322 1111 022457888999988888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC---------C------CcceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL---------S------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~---------~------~~~~~~~~~~~ll~~~ 139 (189)
.+.+++.|++|+++|..... . ..++|+.+...+.+.+
T Consensus 83 ----------------------------~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~ 134 (258)
T PRK07533 83 ----------------------------AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLA 134 (258)
T ss_pred ----------------------------HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 34456789999998854210 0 1235666655544443
Q ss_pred HHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... ..+++|++||..+... . +.+..|..+|.....+.+
T Consensus 135 ~p~m~~~g~Ii~iss~~~~~~---~-~~~~~Y~asKaal~~l~~ 174 (258)
T PRK07533 135 EPLMTNGGSLLTMSYYGAEKV---V-ENYNLMGPVKAALESSVR 174 (258)
T ss_pred HHHhccCCEEEEEeccccccC---C-ccchhhHHHHHHHHHHHH
Confidence 221 1258999988765431 1 233456666776655544
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.8e-11 Score=91.56 Aligned_cols=140 Identities=14% Similarity=0.100 Sum_probs=88.6
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCC---CCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQ---RLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~---~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||++ +||+++++.|+++|++|++.+|+.. ..+++. .....++.+|++++++++++++.+
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-------- 78 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAEL-------- 78 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHH--------
Confidence 5799999985 9999999999999999998888631 111111 123557888999988888877543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----C-----------cceehhhHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----P-----------TTVMSEGMKNIVTA 138 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~-----------~~~~~~~~~~ll~~ 138 (189)
.+.+++.|++|+++|...... . .++|+.+...+.+.
T Consensus 79 ----------------------------~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 130 (262)
T PRK07984 79 ----------------------------GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 130 (262)
T ss_pred ----------------------------HhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence 234566889999988532210 0 13455554444443
Q ss_pred HHH--CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKE--YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~--~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.. ...+++|++||..+... .| .+..|..+|...+.+.+
T Consensus 131 ~~~~~~~~g~Iv~iss~~~~~~---~~-~~~~Y~asKaal~~l~~ 171 (262)
T PRK07984 131 CRSMLNPGSALLTLSYLGAERA---IP-NYNVMGLAKASLEANVR 171 (262)
T ss_pred HHHHhcCCcEEEEEecCCCCCC---CC-CcchhHHHHHHHHHHHH
Confidence 321 12268999988765321 12 23356667777665555
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.3e-11 Score=87.35 Aligned_cols=120 Identities=20% Similarity=0.164 Sum_probs=82.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCC-CCCCc------c--cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDP-QRLPS------E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~-~~~~~------~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
+++||||+|.+|..+++.|.+++ .+++++.|++ ..... + ...++.++.+|+++++++.++++...
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~----- 76 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLR----- 76 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSH-----
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHH-----
Confidence 58999999999999999999996 4789999983 22211 1 24678899999999999998887652
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHHHHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKNIVTAMKE 141 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~ll~~~~~ 141 (189)
+...+++.|||++|...+.... ...+.++.++.+++..
T Consensus 77 -------------------------------~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~ 125 (181)
T PF08659_consen 77 -------------------------------QRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN 125 (181)
T ss_dssp -------------------------------TTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------hccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc
Confidence 1224567888888875433211 1346678889888888
Q ss_pred CCccEEEEeccceeecC
Q psy3626 142 YNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~ 158 (189)
...+.+|++||..+..+
T Consensus 126 ~~l~~~i~~SSis~~~G 142 (181)
T PF08659_consen 126 RPLDFFILFSSISSLLG 142 (181)
T ss_dssp TTTSEEEEEEEHHHHTT
T ss_pred CCCCeEEEECChhHhcc
Confidence 88999999999987654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-10 Score=87.53 Aligned_cols=148 Identities=20% Similarity=0.195 Sum_probs=102.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEE-EecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCT-LLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~-~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
++.++||||+.+||-.++++|++. |.++++ ..|+++..... .+.++++++.|+++.+++++..++.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V------ 76 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEV------ 76 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHH------
Confidence 367999999999999999999986 666544 45556663221 3688999999999999988887654
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHH--hcCCCEEEEeeccCCCCC------------Ccceehhh----HHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA--IEGKDGVVVALGTRNDLS------------PTTVMSEG----MKN 134 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~vv~~~~~~~~~~------------~~~~~~~~----~~~ 134 (189)
.+. .++.+.+++++|...+.. .+++|..+ ++.
T Consensus 77 ------------------------------~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~ 126 (249)
T KOG1611|consen 77 ------------------------------EKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQA 126 (249)
T ss_pred ------------------------------HhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHH
Confidence 223 346889999998654331 23455554 677
Q ss_pred HHHHHHHCCcc-----------EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhhcCC
Q psy3626 135 IVTAMKEYNVS-----------VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSGL 185 (189)
Q Consensus 135 ll~~~~~~~~~-----------~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~ 185 (189)
+++.++++..+ .+|++||..+..+ ...+.....|..+|.++-.+.++..+
T Consensus 127 ~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~-~~~~~~~~AYrmSKaAlN~f~ksls~ 187 (249)
T KOG1611|consen 127 FLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG-GFRPGGLSAYRMSKAALNMFAKSLSV 187 (249)
T ss_pred HHHHHHHHhhcccCCcccccceeEEEeeccccccC-CCCCcchhhhHhhHHHHHHHHHHhhh
Confidence 77777765444 7888888776532 23566666677777776666665443
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=3e-10 Score=82.03 Aligned_cols=135 Identities=19% Similarity=0.111 Sum_probs=96.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-C-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-L-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||..+|.||||-.|+.+++++++.+ + +|+++.|++ ........
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~-~~d~at~k---------------------------------- 62 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRE-LPDPATDK---------------------------------- 62 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhcccceeEEEEEecc-CCCccccc----------------------------------
Confidence 5789999999999999999999985 3 799998885 22211222
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
.+.....|+...++.++..++.|+.+++.|..... ..+.+.-+....+.+++++.|++.|+++||.+
T Consensus 63 ---------~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~G 133 (238)
T KOG4039|consen 63 ---------VVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAG 133 (238)
T ss_pred ---------eeeeEEechHHHHHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccC
Confidence 34445556666667777778888888888765533 44667777788889999999999999999987
Q ss_pred eecCCCCCCCCCccchhhHHHHHHHhhhcCC
Q psy3626 155 LFYEPSKVPPMFHNVNDDHQRMYNVLKDSGL 185 (189)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~ 185 (189)
+-.+ .-..|...|.++|+-+.+..+
T Consensus 134 Ad~s------SrFlY~k~KGEvE~~v~eL~F 158 (238)
T KOG4039|consen 134 ADPS------SRFLYMKMKGEVERDVIELDF 158 (238)
T ss_pred CCcc------cceeeeeccchhhhhhhhccc
Confidence 6332 111255666777766655443
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=91.48 Aligned_cols=140 Identities=14% Similarity=0.062 Sum_probs=92.1
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCC---CCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQ---RLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~---~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+ +.||++++++|+++|++|++..|+.. .+..+. ......+++|++++++++++++..
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~-------- 82 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETL-------- 82 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHH--------
Confidence 579999997 89999999999999999988877632 111111 022456888999988888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~ 139 (189)
.+.+++.|++|+++|.... .+ ..++|+.+...+++.+
T Consensus 83 ----------------------------~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~ 134 (272)
T PRK08159 83 ----------------------------EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRA 134 (272)
T ss_pred ----------------------------HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHH
Confidence 3345678999999886431 00 1236776766666655
Q ss_pred HHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... +.+++|++||..+... . +.+..|..+|.....+.+
T Consensus 135 ~~~~~~~g~Iv~iss~~~~~~---~-p~~~~Y~asKaal~~l~~ 174 (272)
T PRK08159 135 EKLMTDGGSILTLTYYGAEKV---M-PHYNVMGVAKAALEASVK 174 (272)
T ss_pred HHhcCCCceEEEEeccccccC---C-CcchhhhhHHHHHHHHHH
Confidence 432 2368999988654321 1 234456677777766555
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.4e-11 Score=95.04 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=82.4
Q ss_pred EEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 5 AIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 5 ~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
+||||+++||.+++++|+++| ++|++.+|+.+..... ...++.++.+|++++++++++++..
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~----------- 69 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNF----------- 69 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHH-----------
Confidence 599999999999999999999 9999999986543321 1235677888998888887776543
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------Ccceehhh----HHHHHHHHHH
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEG----MKNIVTAMKE 141 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~----~~~ll~~~~~ 141 (189)
.+..++.|++|+++|..... . ..++|+.+ ++.+++.+++
T Consensus 70 -------------------------~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~ 124 (308)
T PLN00015 70 -------------------------RRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKK 124 (308)
T ss_pred -------------------------HhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 22335679999998864321 1 12366666 4555666766
Q ss_pred CC--ccEEEEeccceee
Q psy3626 142 YN--VSVVSVCLSAFLF 156 (189)
Q Consensus 142 ~~--~~~~i~iSS~~~~ 156 (189)
.+ .++||++||..+.
T Consensus 125 ~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 125 SDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCCCCCEEEEEeccccc
Confidence 64 4799999998664
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=91.13 Aligned_cols=140 Identities=11% Similarity=0.022 Sum_probs=88.8
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCC---CCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQ---RLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~---~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||++ +||+++++.|+++|++|++..|++. ...++.. ....++++|++++++++++++..
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~-------- 80 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDI-------- 80 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHH--------
Confidence 5799999997 8999999999999999998887632 1111111 12235688999998888877543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CCC-----------cceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LSP-----------TTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~~-----------~~~~~~~~~~ll~~~ 139 (189)
.+.+++.|++|+++|.... .+. .++|..+...+++.+
T Consensus 81 ----------------------------~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 132 (260)
T PRK06603 81 ----------------------------KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSA 132 (260)
T ss_pred ----------------------------HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445678999998875321 011 235555544444433
Q ss_pred HH--CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KE--YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~--~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.. ..-+++|++||..+... . +.+..|..+|...+.+.+
T Consensus 133 ~~~m~~~G~Iv~isS~~~~~~---~-~~~~~Y~asKaal~~l~~ 172 (260)
T PRK06603 133 EALMHDGGSIVTLTYYGAEKV---I-PNYNVMGVAKAALEASVK 172 (260)
T ss_pred HhhhccCceEEEEecCccccC---C-CcccchhhHHHHHHHHHH
Confidence 21 11268999999765432 1 223456677777665554
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.6e-11 Score=96.93 Aligned_cols=99 Identities=20% Similarity=0.254 Sum_probs=63.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+++||||+|++|++++++|.++|++|++++|+++...... +..
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---------------------~~~-------------- 222 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---------------------NGE-------------- 222 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------------------hhc--------------
Confidence 368999999999999999999999999999998764332110 000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--------CCcceehhhHHHHHHHH
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--------SPTTVMSEGMKNIVTAM 139 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--------~~~~~~~~~~~~ll~~~ 139 (189)
...+..+.+|+.+.+++.+.++++|++|+++|..... ...++|..+..++++++
T Consensus 223 -----~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~ 284 (406)
T PRK07424 223 -----DLPVKTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELF 284 (406)
T ss_pred -----CCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0022344455555555555666677777777643211 11346777776666654
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=89.88 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=88.3
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecCC--CCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRDP--QRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~--~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|||| ++.||.+++++|+++|++|++.+|+. +..+.. ...++.++.+|++++++++++++..
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~-------- 79 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRV-------- 79 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHH--------
Confidence 57999999 89999999999999999999998764 212211 1235668889999998888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC------CCC---------cceehhhHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND------LSP---------TTVMSEGMKNI---- 135 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~------~~~---------~~~~~~~~~~l---- 135 (189)
.+.+++.|++|+++|.... ... .++|..+...+
T Consensus 80 ----------------------------~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~ 131 (256)
T PRK07889 80 ----------------------------REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKAL 131 (256)
T ss_pred ----------------------------HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 3345678899998886421 000 23555554444
Q ss_pred HHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 136 VTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 136 l~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+++ .+++|++|+.... .. +.+..|..+|.....+.+
T Consensus 132 ~~~m~~--~g~Iv~is~~~~~----~~-~~~~~Y~asKaal~~l~~ 170 (256)
T PRK07889 132 LPLMNE--GGSIVGLDFDATV----AW-PAYDWMGVAKAALESTNR 170 (256)
T ss_pred HHhccc--CceEEEEeecccc----cC-CccchhHHHHHHHHHHHH
Confidence 444433 2588888764321 11 234445667776665554
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.5e-10 Score=95.77 Aligned_cols=134 Identities=22% Similarity=0.269 Sum_probs=95.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC---CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG---LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+|+|||||||+|+.+++.|+... -+++.+.|.....+.. .+++ +..+.+-++.+.+..
T Consensus 13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~--~Rl~----~~~~~~lF~~l~~~~------------ 74 (467)
T KOG1221|consen 13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQ--ERLR----TELKDPLFEVLKEKK------------ 74 (467)
T ss_pred CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHH--HHHH----HHHhhhHHHHHHhhC------------
Confidence 689999999999999999999862 3677888876544321 1110 001111122222221
Q ss_pred CCCCccccCceeEEeccccCH------HHHHHHhcCCCEEEEeeccCCCCCCc----ceehhhHHHHHHHHHHC-CccEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKL------ADVKKAIEGKDGVVVALGTRNDLSPT----TVMSEGMKNIVTAMKEY-NVSVV 147 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~vv~~~~~~~~~~~~----~~~~~~~~~ll~~~~~~-~~~~~ 147 (189)
++-..++.++.||+.++ .+.+.....+++|+|+|+...+..+. .+|..|++++++.|++. +.+.+
T Consensus 75 ----p~~l~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~ 150 (467)
T KOG1221|consen 75 ----PEALEKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKAL 150 (467)
T ss_pred ----ccceecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheE
Confidence 11245788888888755 56667888999999999998877654 48999999999999986 58899
Q ss_pred EEeccceeec
Q psy3626 148 SVCLSAFLFY 157 (189)
Q Consensus 148 i~iSS~~~~~ 157 (189)
+|+|++....
T Consensus 151 vhVSTAy~n~ 160 (467)
T KOG1221|consen 151 VHVSTAYSNC 160 (467)
T ss_pred EEeehhheec
Confidence 9999998763
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=9e-11 Score=91.57 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=88.7
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecC---CCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRD---PQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~---~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|||| ++.||++++++|+++|++|++..|. .+.+..+.. .....+.+|++++++++++++..
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-------- 78 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASL-------- 78 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHH--------
Confidence 57999996 6799999999999999999887654 222211110 12346788888888888877543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----------C------CcceehhhHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----------S------PTTVMSEGMKNIVTA 138 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----------~------~~~~~~~~~~~ll~~ 138 (189)
.+.+++.|++|+++|..... . ..++|..+...+.++
T Consensus 79 ----------------------------~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~ 130 (260)
T PRK06997 79 ----------------------------GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKA 130 (260)
T ss_pred ----------------------------HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHH
Confidence 34456789999998864321 0 123566655444444
Q ss_pred HHH--CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKE--YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~--~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.. .+.+++|++||..+... .| .+..|..+|.....+.+
T Consensus 131 ~lp~m~~~g~Ii~iss~~~~~~---~~-~~~~Y~asKaal~~l~~ 171 (260)
T PRK06997 131 ALPMLSDDASLLTLSYLGAERV---VP-NYNTMGLAKASLEASVR 171 (260)
T ss_pred HHHhcCCCceEEEEeccccccC---CC-CcchHHHHHHHHHHHHH
Confidence 332 12368999998765432 12 23356667777665554
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-10 Score=89.80 Aligned_cols=139 Identities=13% Similarity=0.024 Sum_probs=88.5
Q ss_pred eEEEEcCCChhhHHHHHHHHH----cCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 3 KIAIFGATGMTGLCSLEAALK----QGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~----~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
.++||||+++||.+++++|++ +|++|+++.|+++.+..+ ....+.++.+|++++++++++++...
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~--- 78 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALR--- 78 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHH---
Confidence 589999999999999999997 699999999987654322 12356778888888888777765431
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhc----CCCEEEEeeccCCCC----C----------CcceehhhH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE----GKDGVVVALGTRNDL----S----------PTTVMSEGM 132 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~vv~~~~~~~~~----~----------~~~~~~~~~ 132 (189)
+..+ +.|++|+++|..... . ..++|+.+.
T Consensus 79 ---------------------------------~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~ 125 (256)
T TIGR01500 79 ---------------------------------ELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSM 125 (256)
T ss_pred ---------------------------------hccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHH
Confidence 1111 124677777643211 0 012566564
Q ss_pred ----HHHHHHHHHC-C-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 133 ----KNIVTAMKEY-N-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 133 ----~~ll~~~~~~-~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++.+++. + .+++|++||..+.... | ....|..+|...+.+.+
T Consensus 126 ~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~---~-~~~~Y~asKaal~~l~~ 176 (256)
T TIGR01500 126 LCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF---K-GWALYCAGKAARDMLFQ 176 (256)
T ss_pred HHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC---C-CchHHHHHHHHHHHHHH
Confidence 4455555554 2 3689999998765321 1 23346666776665554
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-11 Score=94.19 Aligned_cols=107 Identities=23% Similarity=0.270 Sum_probs=70.3
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCCc
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLPS 83 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (189)
|+||||||+||++|+.+|.+.||+|++++|+++......+..+. .-+.+.+....
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~------------------ 55 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTL------------------ 55 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccC------------------
Confidence 68999999999999999999999999999998877654332211 11111111110
Q ss_pred cccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---------cceehhhHHHHHHHHHHC--CccEEEEecc
Q psy3626 84 EYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---------TTVMSEGMKNIVTAMKEY--NVSVVSVCLS 152 (189)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---------~~~~~~~~~~ll~~~~~~--~~~~~i~iSS 152 (189)
++|++||.+|.+-.... .+..++.|+.+.+...+. +++.+| -+|
T Consensus 56 ------------------------~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~i-saS 110 (297)
T COG1090 56 ------------------------GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLI-SAS 110 (297)
T ss_pred ------------------------CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEE-ecc
Confidence 46777777775443321 235778899999988754 444444 456
Q ss_pred ceeecCCC
Q psy3626 153 AFLFYEPS 160 (189)
Q Consensus 153 ~~~~~~~~ 160 (189)
+.++++..
T Consensus 111 AvGyYG~~ 118 (297)
T COG1090 111 AVGYYGHS 118 (297)
T ss_pred eEEEecCC
Confidence 66666543
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=6e-10 Score=86.07 Aligned_cols=141 Identities=13% Similarity=0.055 Sum_probs=91.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC--Cc---ccC----CceeEEeccccC-hhHHHHhhhcCccee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL--PS---EYH----SKVEIIQGDVLK-LADVKKAIEGKDGLE 70 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~---~~~----~~~~~~~~d~~~-~~~~~~~~~~~~~~~ 70 (189)
||+++||||++++|+.+++.|+++|++|++..|+.... +. ... ..+.+..+|+++ +++++..++..
T Consensus 5 ~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~---- 80 (251)
T COG1028 5 GKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA---- 80 (251)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH----
Confidence 47899999999999999999999999988888875541 11 112 356677788887 77777766543
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-CC-----------cceehhhHHHHHHH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-SP-----------TTVMSEGMKNIVTA 138 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~~-----------~~~~~~~~~~ll~~ 138 (189)
.+.+++.|++++++|..... +. ..+|..+...+.+.
T Consensus 81 --------------------------------~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~ 128 (251)
T COG1028 81 --------------------------------EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRA 128 (251)
T ss_pred --------------------------------HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHH
Confidence 34466789999999976431 11 12555554444442
Q ss_pred HHHC-CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEY-NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~-~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+... ..+++|.+||..+. ..+.. +..|..+|.....+.+
T Consensus 129 ~~~~~~~~~Iv~isS~~~~-~~~~~---~~~Y~~sK~al~~~~~ 168 (251)
T COG1028 129 ALPLMKKQRIVNISSVAGL-GGPPG---QAAYAASKAALIGLTK 168 (251)
T ss_pred HHHhhhhCeEEEECCchhc-CCCCC---cchHHHHHHHHHHHHH
Confidence 2211 01199999998865 32211 3456767766654433
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-10 Score=91.31 Aligned_cols=118 Identities=21% Similarity=0.141 Sum_probs=89.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++|||+|.+||.++++.|..+|.+|+...|+.+...+. ...++.++++|+++..++++..+..
T Consensus 36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~------- 108 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF------- 108 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH-------
Confidence 4799999999999999999999999999999997443321 2356778899999988888777543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---------Ccceehhh----HHHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---------PTTVMSEG----MKNIVTAMK 140 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---------~~~~~~~~----~~~ll~~~~ 140 (189)
.+.....|++|++||...... ...+|..| +..+++.++
T Consensus 109 -----------------------------~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk 159 (314)
T KOG1208|consen 109 -----------------------------KKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLK 159 (314)
T ss_pred -----------------------------HhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHh
Confidence 344556899999998654332 23366666 566777788
Q ss_pred HCCccEEEEecccee
Q psy3626 141 EYNVSVVSVCLSAFL 155 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~ 155 (189)
.....|+|++||...
T Consensus 160 ~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 160 RSAPSRIVNVSSILG 174 (314)
T ss_pred hCCCCCEEEEcCccc
Confidence 776689999999775
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.5e-10 Score=87.86 Aligned_cols=113 Identities=22% Similarity=0.219 Sum_probs=80.0
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhH----HHHhhhcCcceeee
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLAD----VKKAIEGKDGLEVC 72 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~----~~~~~~~~~~~~~~ 72 (189)
.+|||||.+||++.+++|.++|++|.+++|++++++.. ....+.++..|.++++. ++..+++.|
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~----- 126 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD----- 126 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc-----
Confidence 68999999999999999999999999999999888643 12345566666665443 333333332
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-------------cceehhh----HHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-------------TTVMSEG----MKNI 135 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-------------~~~~~~~----~~~l 135 (189)
+.++|+++|..++.+. ..+|..+ ++.+
T Consensus 127 ------------------------------------VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~i 170 (312)
T KOG1014|consen 127 ------------------------------------VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLI 170 (312)
T ss_pred ------------------------------------eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHh
Confidence 3467777776553311 1244443 6778
Q ss_pred HHHHHHCCccEEEEeccceeec
Q psy3626 136 VTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 136 l~~~~~~~~~~~i~iSS~~~~~ 157 (189)
++.|.+.+-+-++.+||..+..
T Consensus 171 lp~M~~r~~G~IvnigS~ag~~ 192 (312)
T KOG1014|consen 171 LPGMVERKKGIIVNIGSFAGLI 192 (312)
T ss_pred hhhhhcCCCceEEEeccccccc
Confidence 8888888778999999998765
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.4e-10 Score=88.00 Aligned_cols=151 Identities=13% Similarity=0.027 Sum_probs=84.8
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---------------cCC----ceeEEeccc--cChhH
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---------------YHS----KVEIIQGDV--LKLAD 58 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---------------~~~----~~~~~~~d~--~~~~~ 58 (189)
|+++|||| +.+||+++++.|.++|.+|++ .|+.+.++.. ... ....+.+|+ .++++
T Consensus 10 k~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 88 (303)
T PLN02730 10 KRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPED 88 (303)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcccc
Confidence 68999999 899999999999999999988 5554333211 001 134677777 44442
Q ss_pred HHHhhhcCcceeeecccCCCCCCCccccCceeEEec-cccCH----HHHHHHhcCCCEEEEeeccCCC--CCC-------
Q psy3626 59 VKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQG-DVLKL----ADVKKAIEGKDGVVVALGTRND--LSP------- 124 (189)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~d~vv~~~~~~~~--~~~------- 124 (189)
+..-++.. .+. .+ +-.+. +.+.+.+++.|++|+++|.... .+.
T Consensus 89 ~~~~~~~~----------------------~~~-~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~ 145 (303)
T PLN02730 89 VPEDVKTN----------------------KRY-AGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKG 145 (303)
T ss_pred Cchhhhcc----------------------ccc-ccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHH
Confidence 21111000 000 00 00001 2234456779999999964221 111
Q ss_pred ----cceehhhH----HHHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 125 ----TTVMSEGM----KNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 125 ----~~~~~~~~----~~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++|+.+. +.+++.+++. +++|++||..+... .|.....|..+|...+.+.+
T Consensus 146 ~~~~~~vN~~~~~~l~~~~~p~m~~~--G~II~isS~a~~~~---~p~~~~~Y~asKaAl~~l~~ 205 (303)
T PLN02730 146 YLAAISASSYSFVSLLQHFGPIMNPG--GASISLTYIASERI---IPGYGGGMSSAKAALESDTR 205 (303)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechhhcCC---CCCCchhhHHHHHHHHHHHH
Confidence 13555554 4445555543 68999999776432 22212247777777776665
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.7e-09 Score=78.95 Aligned_cols=119 Identities=16% Similarity=0.118 Sum_probs=83.5
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+||||+.+||..++++|++.|-+|++..|+++.+.+. ..+.+.-..+|+.|.++....++-.
T Consensus 7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewL-------------- 72 (245)
T COG3967 7 TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWL-------------- 72 (245)
T ss_pred EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHH--------------
Confidence 799999999999999999999999999999998887654 2356777888888887766555322
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-------------cceehhhHH----HHHHHHHHCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-------------TTVMSEGMK----NIVTAMKEYN 143 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-------------~~~~~~~~~----~ll~~~~~~~ 143 (189)
.+..-..++++++||.-..... ...|..+.. .+++-+.++.
T Consensus 73 ----------------------kk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~ 130 (245)
T COG3967 73 ----------------------KKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP 130 (245)
T ss_pred ----------------------HhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC
Confidence 2222246788888885332211 124444444 4455555565
Q ss_pred ccEEEEeccceeec
Q psy3626 144 VSVVSVCLSAFLFY 157 (189)
Q Consensus 144 ~~~~i~iSS~~~~~ 157 (189)
-..+|.+||.-++.
T Consensus 131 ~a~IInVSSGLafv 144 (245)
T COG3967 131 EATIINVSSGLAFV 144 (245)
T ss_pred CceEEEeccccccC
Confidence 56899999987654
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.2e-10 Score=83.88 Aligned_cols=126 Identities=18% Similarity=0.184 Sum_probs=95.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++++|+.|+||+++..+|+++|..+.++..+.+..+.. ....+.|+++|+++..+++++++.
T Consensus 6 Kna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~k--------- 76 (261)
T KOG4169|consen 6 KNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDK--------- 76 (261)
T ss_pred ceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHH---------
Confidence 6899999999999999999999999888887776655421 124678999999999888888854
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc---ceeh----hhHHHHHHHHHHCC---c
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT---TVMS----EGMKNIVTAMKEYN---V 144 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~---~~~~----~~~~~ll~~~~~~~---~ 144 (189)
+.+.++..|++|+.+|...+..-+ .+|. +++...++.+.+.+ .
T Consensus 77 ---------------------------i~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~G 129 (261)
T KOG4169|consen 77 ---------------------------ILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKG 129 (261)
T ss_pred ---------------------------HHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCC
Confidence 457788899999999987644221 2343 34677888887642 4
Q ss_pred cEEEEeccceeecCCCCCC
Q psy3626 145 SVVSVCLSAFLFYEPSKVP 163 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p 163 (189)
+-+|.+||..+....+.+|
T Consensus 130 GiIvNmsSv~GL~P~p~~p 148 (261)
T KOG4169|consen 130 GIIVNMSSVAGLDPMPVFP 148 (261)
T ss_pred cEEEEeccccccCccccch
Confidence 6899999999876444443
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=99.05 E-value=3e-09 Score=83.38 Aligned_cols=137 Identities=20% Similarity=0.115 Sum_probs=98.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---c-CCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---Y-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|-|+|||...+.|+.++++|.++|+.|++.+-.++..+.+ . .+++..++.|++++++++++.+-...
T Consensus 30 k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~--------- 100 (322)
T KOG1610|consen 30 KAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKK--------- 100 (322)
T ss_pred cEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHH---------
Confidence 4599999999999999999999999999999776655443 2 46788889999999998888764311
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCCCC------------cceehhh----HHHHHHHH
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDLSP------------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~~~------------~~~~~~~----~~~ll~~~ 139 (189)
.++ +...+||+||......+ -++|..| ++.+++..
T Consensus 101 ---------------------------~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLl 153 (322)
T KOG1610|consen 101 ---------------------------HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLL 153 (322)
T ss_pred ---------------------------hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 111 25689999985543322 2367666 55666777
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
+++. +|+|.+||..+-... +...+|+.+|.+.+.+
T Consensus 154 r~ar-GRvVnvsS~~GR~~~----p~~g~Y~~SK~aVeaf 188 (322)
T KOG1610|consen 154 RRAR-GRVVNVSSVLGRVAL----PALGPYCVSKFAVEAF 188 (322)
T ss_pred Hhcc-CeEEEecccccCccC----cccccchhhHHHHHHH
Confidence 7776 699999998873321 2345677777776644
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.2e-09 Score=77.73 Aligned_cols=63 Identities=19% Similarity=0.099 Sum_probs=48.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIE 64 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~ 64 (189)
++++||||++++|..+++.|.++|++|.+++|+++..... ......++.+|+++++++++.++
T Consensus 17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~ 85 (169)
T PRK06720 17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVIS 85 (169)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 5799999999999999999999999999999886543211 12335567778877777766654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-09 Score=86.68 Aligned_cols=73 Identities=25% Similarity=0.208 Sum_probs=63.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|+|+|+ |++|+.++..|++++ .+|++.+|++++..+.. +.+++..+.|+.+.+++.+++++.|.+|.+++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence 899999998 999999999999997 89999999987665542 34788999999999999999988888776665
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.7e-09 Score=75.48 Aligned_cols=119 Identities=20% Similarity=0.116 Sum_probs=87.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cC--CceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
+..+||||+.+||++++..|.++|++|.+.+++....++. .. .+-..+.+|++++.+++..+++.
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~---------- 84 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEM---------- 84 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHH----------
Confidence 4689999999999999999999999999999987654432 11 24457889999999888877553
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~ 141 (189)
.+-++.++++++|+|...+..- ..+|..| ++...+++..
T Consensus 85 --------------------------~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~ 138 (256)
T KOG1200|consen 85 --------------------------EKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVM 138 (256)
T ss_pred --------------------------HHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHH
Confidence 5667789999999998875421 1255555 3445555333
Q ss_pred C--CccEEEEeccceee
Q psy3626 142 Y--NVSVVSVCLSAFLF 156 (189)
Q Consensus 142 ~--~~~~~i~iSS~~~~ 156 (189)
. +.-++|.+||..+.
T Consensus 139 ~~~~~~sIiNvsSIVGk 155 (256)
T KOG1200|consen 139 NQQQGLSIINVSSIVGK 155 (256)
T ss_pred hcCCCceEEeehhhhcc
Confidence 2 23499999997654
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.9e-08 Score=96.78 Aligned_cols=156 Identities=15% Similarity=0.134 Sum_probs=97.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCC---Cccc------------------CCc-----eeEEecccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRL---PSEY------------------HSK-----VEIIQGDVL 54 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~---~~~~------------------~~~-----~~~~~~d~~ 54 (189)
++++||||+++||..++++|+++ |.+|++++|++... .... +.+ +......+.
T Consensus 1998 ~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~ 2077 (2582)
T TIGR02813 1998 DVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVL 2077 (2582)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccc
Confidence 47999999999999999999998 69999999983211 0000 000 000011111
Q ss_pred ChhHHHHhhhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhc------CCCEEEEeeccCCCCC-----
Q psy3626 55 KLADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE------GKDGVVVALGTRNDLS----- 123 (189)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~vv~~~~~~~~~~----- 123 (189)
....+.+.++... ....++..+.+|+.|.+++.+.+. ++|.+||++|......
T Consensus 2078 ~~~ei~~~la~l~----------------~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t 2141 (2582)
T TIGR02813 2078 SSLEIAQALAAFK----------------AAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKT 2141 (2582)
T ss_pred hhHHHHHHHHHHH----------------hcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCC
Confidence 1122222221110 012356778888888876665443 5899999999654321
Q ss_pred ------CcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHH
Q psy3626 124 ------PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMY 177 (189)
Q Consensus 124 ------~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~ 177 (189)
.+++|+.|+.++++++.....++||++||..++...+ ....|...+....
T Consensus 2142 ~e~f~~v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~----gqs~YaaAkaaL~ 2197 (2582)
T TIGR02813 2142 LEEFNAVYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNT----GQSDYAMSNDILN 2197 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCC----CcHHHHHHHHHHH
Confidence 1358899999999999877667899999988765322 1223555554443
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.9e-08 Score=78.91 Aligned_cols=120 Identities=20% Similarity=0.189 Sum_probs=86.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
.+++||||+..+|.+++..+..+|.+|+++.|+..++.+. ....+.+..+|+.+.+++...+++.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l------- 106 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL------- 106 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh-------
Confidence 3799999999999999999999999999999998766542 1123778889999888888887665
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~--- 139 (189)
.+.....|.+++|+|..-+... .++|..++-|++++.
T Consensus 107 -----------------------------~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~ 157 (331)
T KOG1210|consen 107 -----------------------------RDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARA 157 (331)
T ss_pred -----------------------------hhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 2223346888888875433211 236777766665544
Q ss_pred -HHCC-ccEEEEeccceeec
Q psy3626 140 -KEYN-VSVVSVCLSAFLFY 157 (189)
Q Consensus 140 -~~~~-~~~~i~iSS~~~~~ 157 (189)
++.. .++++.+||..+-.
T Consensus 158 mk~~~~~g~I~~vsS~~a~~ 177 (331)
T KOG1210|consen 158 MKKREHLGRIILVSSQLAML 177 (331)
T ss_pred hhccccCcEEEEehhhhhhc
Confidence 4433 45999999987644
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.5e-09 Score=82.36 Aligned_cols=132 Identities=15% Similarity=0.067 Sum_probs=89.2
Q ss_pred cCC--ChhhHHHHHHHHHcCCcEEEEecCCCCC----Cccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 8 GAT--GMTGLCSLEAALKQGLEVCTLLRDPQRL----PSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 8 Gat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~----~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|++ +.||+++++.|+++|++|++.+|+.++. ..+. .....++.+|++++++++++++.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~--------------- 65 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDE--------------- 65 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHH---------------
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHH---------------
Confidence 566 9999999999999999999999998763 2111 12344689999999888887754
Q ss_pred CCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCC----CCCc-----------ceehhhHHHHHHHH----H
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRND----LSPT-----------TVMSEGMKNIVTAM----K 140 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~----~~~~-----------~~~~~~~~~ll~~~----~ 140 (189)
+.+.+ ++.|++|+++|.... .+.. ++|..+...+.+.+ +
T Consensus 66 ---------------------~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (241)
T PF13561_consen 66 ---------------------AVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMK 124 (241)
T ss_dssp ---------------------HHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------HHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35566 889999999987654 2211 24444444444433 3
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+. +++|++||...... .+.+..|...|..++.+.+
T Consensus 125 ~~--gsii~iss~~~~~~----~~~~~~y~~sKaal~~l~r 159 (241)
T PF13561_consen 125 KG--GSIINISSIAAQRP----MPGYSAYSASKAALEGLTR 159 (241)
T ss_dssp HE--EEEEEEEEGGGTSB----STTTHHHHHHHHHHHHHHH
T ss_pred hC--CCcccccchhhccc----CccchhhHHHHHHHHHHHH
Confidence 33 68999988865332 2334456667777766655
|
... |
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=1e-08 Score=77.07 Aligned_cols=176 Identities=14% Similarity=0.096 Sum_probs=116.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeeccc-
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL- 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~- 75 (189)
++..++||+||+|+.++..+...||.+.-.+|+....... .....++.-.+.-++.+.-..++++-.+.+.++-
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas~~snkid~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgil 82 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGASPHSNKIDDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGIL 82 (283)
T ss_pred ccceeecccccchhhhhHHHHhcCceEEEeccccCCCcCCCCcchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEe
Confidence 5788999999999999999999999999888875443221 1112223333344555555555554333333322
Q ss_pred --CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 76 --RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
.+.++.-+.|+..+.+..++.....-....+.+...++.++|..... ..+.+|-....+..+++.++|+++|+|+|.
T Consensus 83 sen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa 162 (283)
T KOG4288|consen 83 SENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISA 162 (283)
T ss_pred ecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEh
Confidence 12235556677788888887765555556677788888888776544 334577777888999999999999999987
Q ss_pred ceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 153 AFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 153 ~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..... .|.....|...|.++|..|.
T Consensus 163 ~d~~~----~~~i~rGY~~gKR~AE~Ell 187 (283)
T KOG4288|consen 163 HDFGL----PPLIPRGYIEGKREAEAELL 187 (283)
T ss_pred hhcCC----CCccchhhhccchHHHHHHH
Confidence 64311 12223347888888886665
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.9e-08 Score=77.35 Aligned_cols=33 Identities=18% Similarity=-0.020 Sum_probs=29.5
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
|+++|||++ .+||+++++.|.++|++|++.++.
T Consensus 9 k~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 9 KIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 579999995 899999999999999999987654
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.1e-08 Score=72.56 Aligned_cols=102 Identities=24% Similarity=0.308 Sum_probs=73.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC---cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL---EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|++|+|||++|.+|+++.+.+.+.|. +-..... -.+|+++..+.+..++..++
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------kd~DLt~~a~t~~lF~~ekP--------- 56 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------KDADLTNLADTRALFESEKP--------- 56 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------ccccccchHHHHHHHhccCC---------
Confidence 79999999999999999999988754 2222221 23577777777777766544
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeecc--------CCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGT--------RNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~--------~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
..+|+.++. .++.+....|.....|++..|-+.|++++++
T Consensus 57 --------------------------------thVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vs 104 (315)
T KOG1431|consen 57 --------------------------------THVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVS 104 (315)
T ss_pred --------------------------------ceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhh
Confidence 334444331 1222345678888899999999999999999
Q ss_pred eccceeecC
Q psy3626 150 CLSAFLFYE 158 (189)
Q Consensus 150 iSS~~~~~~ 158 (189)
+.|+-.+.+
T Consensus 105 clStCIfPd 113 (315)
T KOG1431|consen 105 CLSTCIFPD 113 (315)
T ss_pred hcceeecCC
Confidence 888877765
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-07 Score=74.17 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=54.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhc--Ccceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~ 73 (189)
|+|+|+||||. |+.+++.|.++|++|++..+++.....+...+...+..+..+.+++.+.+++ .+.+|.++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt 73 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDAT 73 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence 58999999999 9999999999999999999998766554434344566777788888888865 44555443
|
This enzyme was found to be a monomer by gel filtration. |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.5e-07 Score=75.57 Aligned_cols=112 Identities=17% Similarity=0.125 Sum_probs=76.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+||.|+|+.|.+|+.++..|..++ .++.++++.. ... ...|+.+...
T Consensus 8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g--------~a~Dl~~~~~-------------------- 57 (321)
T PTZ00325 8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APG--------VAADLSHIDT-------------------- 57 (321)
T ss_pred CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccc--------cccchhhcCc--------------------
Confidence 7899999999999999999998654 6788888822 111 0112222110
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----CcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----PTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
. ....+..++.++.+.+.++|+||+++|...... ....|...++++++++++++++++|+++|-
T Consensus 58 ---------~--~~v~~~td~~~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SN 126 (321)
T PTZ00325 58 ---------P--AKVTGYADGELWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSN 126 (321)
T ss_pred ---------C--ceEEEecCCCchHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 0 011122233344577888999999999865432 134678899999999999999999999884
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=7.4e-07 Score=68.03 Aligned_cols=116 Identities=18% Similarity=0.185 Sum_probs=81.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------------cCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------------YHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|..+|||-||.=|++|++.|+..||+|.++.|+.+..... .+.......+|++|...+.+.+...++
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP- 107 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP- 107 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc-
Confidence 4589999999999999999999999999999987755421 124466777788887777777765532
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-------CCCCcceehhhHHHHHHHHHHC
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN-------DLSPTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~-------~~~~~~~~~~~~~~ll~~~~~~ 142 (189)
+-+++.+++.+ +....++...|+.+++++.+..
T Consensus 108 ----------------------------------------tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c 147 (376)
T KOG1372|consen 108 ----------------------------------------TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRAC 147 (376)
T ss_pred ----------------------------------------hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhc
Confidence 23333333322 1122356777899999998876
Q ss_pred Cc---cEEEEeccceeecC
Q psy3626 143 NV---SVVSVCLSAFLFYE 158 (189)
Q Consensus 143 ~~---~~~i~iSS~~~~~~ 158 (189)
+. -||...||+..++.
T Consensus 148 ~l~~~VrfYQAstSElyGk 166 (376)
T KOG1372|consen 148 RLTEKVRFYQASTSELYGK 166 (376)
T ss_pred CcccceeEEecccHhhccc
Confidence 52 37777787776653
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.6e-07 Score=71.20 Aligned_cols=97 Identities=14% Similarity=0.033 Sum_probs=69.3
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCCccccCceeEEeccc
Q psy3626 17 SLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDV 96 (189)
Q Consensus 17 l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (189)
++++|+++|++|++++|+++... ...++++|+++.++++++++..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~------------------------------ 45 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAAL------------------------------ 45 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHh------------------------------
Confidence 46788899999999999876532 2346788888888877766532
Q ss_pred cCHHHHHHHhcCCCEEEEeeccCCCC---CCcceehhhHHHHHHHHHHC--CccEEEEeccceeec
Q psy3626 97 LKLADVKKAIEGKDGVVVALGTRNDL---SPTTVMSEGMKNIVTAMKEY--NVSVVSVCLSAFLFY 157 (189)
Q Consensus 97 ~~~~~~~~~~~~~d~vv~~~~~~~~~---~~~~~~~~~~~~ll~~~~~~--~~~~~i~iSS~~~~~ 157 (189)
.+++|++|+++|..... ...++|..++..+++.+... ..++||++||..++.
T Consensus 46 ---------~~~iD~li~nAG~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 46 ---------PGRIDALFNIAGVPGTAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAE 102 (241)
T ss_pred ---------cCCCeEEEECCCCCCCCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhc
Confidence 13578888888864322 22467888888888877643 236999999988764
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.1e-06 Score=70.49 Aligned_cols=110 Identities=23% Similarity=0.259 Sum_probs=72.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc---CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ---GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|||+|+||+|.+|++++..|... ++++.+++|++. .. . ...|+.+..
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~----g----~alDl~~~~--------------------- 50 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TP----G----VAVDLSHIP--------------------- 50 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Cc----c----eehhhhcCC---------------------
Confidence 68999999999999999988552 467788887643 11 0 222333210
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
....+.+ .+.+++.+.+.++|+||.++|....... ...|...++++++.+++.+.+++|.+.|
T Consensus 51 ---------~~~~i~~--~~~~d~~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 51 ---------TAVKIKG--FSGEDPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred ---------CCceEEE--eCCCCHHHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 0011111 1122334566778999999997654322 2356678899999999999888888776
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.4e-07 Score=67.09 Aligned_cols=65 Identities=22% Similarity=0.145 Sum_probs=49.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGK 66 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~ 66 (189)
+.+++||+.-+||+.++..|.+.|.+|+...|++..+..+- ...+..+.+|+...+.+.+.+...
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v 75 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV 75 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc
Confidence 46899999999999999999999999999999987776542 133566666666666655555443
|
|
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.6e-07 Score=72.29 Aligned_cols=86 Identities=24% Similarity=0.356 Sum_probs=62.5
Q ss_pred eEEEEcCCChhhHHHHHHHHH----cCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALK----QGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.++|.||+||.|+.+++.+.+ ++.+.-+..|++.++.+.. +.+-+.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL-----------------~~~~~k------------- 56 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVL-----------------EKVGEK------------- 56 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHH-----------------HHHhhc-------------
Confidence 389999999999999999998 5888888999887765321 111110
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND 121 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~ 121 (189)
.+++....+ ++.+|..|++.+.+...++.++++|+|+...
T Consensus 57 --~~~~ls~~~-i~i~D~~n~~Sl~emak~~~vivN~vGPyR~ 96 (423)
T KOG2733|consen 57 --TGTDLSSSV-ILIADSANEASLDEMAKQARVIVNCVGPYRF 96 (423)
T ss_pred --cCCCcccce-EEEecCCCHHHHHHHHhhhEEEEecccccee
Confidence 011223345 7788888888888888888899999998653
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.45 E-value=9.7e-07 Score=72.52 Aligned_cols=37 Identities=24% Similarity=0.385 Sum_probs=32.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQR 37 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~ 37 (189)
||||.|.||||++|+.+++.|.++ ..+++.+.++.+.
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa 75 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA 75 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence 468999999999999999999998 7899998876443
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.9e-07 Score=74.55 Aligned_cols=70 Identities=26% Similarity=0.371 Sum_probs=47.1
Q ss_pred EEEEcCCChhhHHHHHHHHHcC-C-cEEEEecCCCCCCcc----cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 4 IAIFGATGMTGLCSLEAALKQG-L-EVCTLLRDPQRLPSE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g-~-~v~~~~r~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+|+ |++|+.+++.|.++. . +|++.+|+.+++..+ ...++.+.+.|+.|++++++.++++|.||.|++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAG 76 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCc
Confidence 789999 999999999999985 4 899999998765543 234566666666666666666666555544443
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.5e-06 Score=68.60 Aligned_cols=111 Identities=17% Similarity=0.148 Sum_probs=75.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+||.|+|++|.+|+.++..|..++ .++.++++.+ +.. ...|+.+-..
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g--------~a~Dl~~~~~--------------------- 67 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPG--------VAADVSHINT--------------------- 67 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCe--------eEchhhhCCc---------------------
Confidence 489999999999999999998765 4788888876 111 1123222110
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
.. ...++.+.+++.+.+.++|+||+++|....... ...|...++++.+.+++.+++++++++|=
T Consensus 68 --------~~--~i~~~~~~~d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSN 136 (323)
T PLN00106 68 --------PA--QVRGFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISN 136 (323)
T ss_pred --------Cc--eEEEEeCCCCHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 00 011222233456777888999999887654321 23788889999999999999888888774
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.5e-07 Score=69.13 Aligned_cols=74 Identities=20% Similarity=0.156 Sum_probs=59.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+||+|.+|+.+++.|.+.|++|+++.|++++...+. ..+......|..+.+++.+.++++|.++.++..
T Consensus 29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~ 107 (194)
T cd01078 29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAA 107 (194)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCC
Confidence 58999999999999999999999999999999876543321 123456667888889999999999988877765
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.4e-06 Score=68.00 Aligned_cols=112 Identities=16% Similarity=0.094 Sum_probs=68.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-------CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-------LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
.||+|+|++|++|++++..|+..+ .++.++++.+.. .... . ...|+.+...
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~-g----~~~Dl~d~~~---------------- 60 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALE-G----VVMELQDCAF---------------- 60 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-cccc-c----eeeehhhccc----------------
Confidence 479999999999999999998843 589999986531 1111 1 1223332110
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCC-ccE-E
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYN-VSV-V 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~-~~~-~ 147 (189)
...+++....++.+.+.++|+||+++|....... .+.|+..++.+.+.+.+.. .+. +
T Consensus 61 ----------------~~~~~~~~~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~ii 124 (325)
T cd01336 61 ----------------PLLKSVVATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKV 124 (325)
T ss_pred ----------------cccCCceecCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 0001111123445667788999999887654321 2367777788888888773 344 4
Q ss_pred EEec
Q psy3626 148 SVCL 151 (189)
Q Consensus 148 i~iS 151 (189)
|.+|
T Consensus 125 ivvs 128 (325)
T cd01336 125 LVVG 128 (325)
T ss_pred EEec
Confidence 4444
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.6e-07 Score=64.78 Aligned_cols=101 Identities=22% Similarity=0.176 Sum_probs=79.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
..+||||...+|+..+++|.++|.+|.+++-..++-... .+.++-|...|+++++++..+++.+
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~a------------- 77 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKA------------- 77 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHH-------------
Confidence 368999999999999999999999999998876655432 4677889999999999999888765
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------------CcceehhhHHHHHHHH
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~ 139 (189)
..-+++.|..++|+|...... ..++|+.|+-|+++..
T Consensus 78 -----------------------k~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~ 131 (260)
T KOG1199|consen 78 -----------------------KAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG 131 (260)
T ss_pred -----------------------HhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence 345678899999998644221 1247888888877643
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-06 Score=64.97 Aligned_cols=67 Identities=25% Similarity=0.362 Sum_probs=51.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHh-hhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKA-IEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~-~~~~~~~ 69 (189)
|+++|.|+ |.+|+.+++.|.++|++|+++.++++....... .....+.+|.++++.++++ ++.+|.+
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~v 70 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAV 70 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEE
Confidence 68999996 999999999999999999999999877655322 4566777777777776665 4444443
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.9e-06 Score=68.58 Aligned_cols=82 Identities=23% Similarity=0.221 Sum_probs=57.2
Q ss_pred ceEEEEcCCChhhHH--HHHHHHHcCCcEEEEecCCCCCC---------------cc---cCCceeEEeccccChhHHHH
Q psy3626 2 KKIAIFGATGMTGLC--SLEAALKQGLEVCTLLRDPQRLP---------------SE---YHSKVEIIQGDVLKLADVKK 61 (189)
Q Consensus 2 ~~i~ItGatG~iG~~--l~~~L~~~g~~v~~~~r~~~~~~---------------~~---~~~~~~~~~~d~~~~~~~~~ 61 (189)
|+++|||+++.+|.+ +++.| ++|.+++++.+..+... +. .+.....+.+|+++++++++
T Consensus 42 K~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~ 120 (398)
T PRK13656 42 KKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQK 120 (398)
T ss_pred CEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 689999999999999 89999 99999888875321111 01 11234566777777777666
Q ss_pred hhhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC
Q psy3626 62 AIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120 (189)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~ 120 (189)
+++. +.+.+++.|++||++|...
T Consensus 121 lie~------------------------------------I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 121 VIEL------------------------------------IKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHH------------------------------------HHHhcCCCCEEEECCccCC
Confidence 6643 3455667888888887653
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.3e-06 Score=63.26 Aligned_cols=65 Identities=25% Similarity=0.282 Sum_probs=39.9
Q ss_pred CCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecc
Q psy3626 9 ATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 9 atG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~ 74 (189)
+||++|++++++|+++|++|+++.|+..... ....++.++.++..+ .+.+.+.+++.|.+|+++.
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AA 90 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMA 90 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCc
Confidence 3899999999999999999999987643221 112344554433322 2344444455555555554
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.9e-07 Score=64.97 Aligned_cols=66 Identities=24% Similarity=0.278 Sum_probs=47.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.++| .|-.|+.++++|+++|++|++++|++++.+.+...+ ..-.++..++.+++|.++.+..
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-------~~~~~s~~e~~~~~dvvi~~v~ 66 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-------AEVADSPAEAAEQADVVILCVP 66 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-------EEEESSHHHHHHHBSEEEE-SS
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-------hhhhhhhhhHhhcccceEeecc
Confidence 89999999 599999999999999999999999987665543332 2223455666777777776665
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.5e-06 Score=63.14 Aligned_cols=74 Identities=19% Similarity=0.179 Sum_probs=48.8
Q ss_pred ceEEEEcCC----------------ChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhh
Q psy3626 2 KKIAIFGAT----------------GMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGat----------------G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|+|+||+|. ||+|+++++.|+.+|++|+++++......... ......+..+....+.+.+.+
T Consensus 4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~ 83 (229)
T PRK09620 4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSII 83 (229)
T ss_pred CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHh
Confidence 689999886 99999999999999999999986433211111 122334455334445666666
Q ss_pred h--cCcceeeeccc
Q psy3626 64 E--GKDGLEVCTLL 75 (189)
Q Consensus 64 ~--~~~~~~~~~~~ 75 (189)
+ ++|.+|+++..
T Consensus 84 ~~~~~D~VIH~AAv 97 (229)
T PRK09620 84 THEKVDAVIMAAAG 97 (229)
T ss_pred cccCCCEEEECccc
Confidence 4 46766666543
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.9e-06 Score=63.78 Aligned_cols=119 Identities=16% Similarity=0.055 Sum_probs=74.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
.+|+|||+-|.+|..++..|..+ |- .|+..+-.... +... ..-.++..|+.|...+++.+-+..+-++.+.
T Consensus 45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~-~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf----- 117 (366)
T KOG2774|consen 45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT-DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF----- 117 (366)
T ss_pred CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc-ccCCchhhhhhccccHHHhhcccccceeeeH-----
Confidence 48999999999999999999887 64 45544332211 1111 2334677888888877776654422111111
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~ 158 (189)
.. +.++.|........++|+.|..|+++.+.+++.+-|| -|+.++++.
T Consensus 118 --------------------SA----------LLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGP 165 (366)
T KOG2774|consen 118 --------------------SA----------LLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGP 165 (366)
T ss_pred --------------------HH----------HHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCC
Confidence 11 2222333333344678999999999999999874444 466666653
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.3e-05 Score=64.88 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=30.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCc---EEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLE---VCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~---v~~~~r~~~ 36 (189)
|++|+|.||||++|+.+++.|.+++|. +..+.+..+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 789999999999999999999998765 477766643
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=6.8e-06 Score=66.36 Aligned_cols=111 Identities=19% Similarity=0.173 Sum_probs=75.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-C-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-G-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
++++|+||+|++|+.++++|.++ | .+++++.|++.++..+... +..+++. ++.+.+.++|.+++++....+-
T Consensus 156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e---l~~~~i~---~l~~~l~~aDiVv~~ts~~~~~ 229 (340)
T PRK14982 156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE---LGGGKIL---SLEEALPEADIVVWVASMPKGV 229 (340)
T ss_pred CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH---hccccHH---hHHHHHccCCEEEECCcCCcCC
Confidence 68999999999999999999865 5 5899999987655543211 1123333 4668889999999888874442
Q ss_pred -CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC
Q psy3626 80 -RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120 (189)
Q Consensus 80 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~ 120 (189)
..+... +-..+-+|+--|.++.....+.++.+..-|...
T Consensus 230 ~I~~~~l--~~~~~viDiAvPRDVd~~v~~~~V~v~~gG~V~ 269 (340)
T PRK14982 230 EIDPETL--KKPCLMIDGGYPKNLDTKVQGPGIHVLKGGIVE 269 (340)
T ss_pred cCCHHHh--CCCeEEEEecCCCCCCcccCCCCEEEEeCCccc
Confidence 333222 223667788778777777777666666645433
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.4e-05 Score=54.75 Aligned_cols=108 Identities=24% Similarity=0.284 Sum_probs=67.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+|++|.+|++++..|...+ .++.+++++++..... ..|+.+ .....
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~--------a~Dl~~------~~~~~------------- 53 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGE--------ALDLSH------ASAPL------------- 53 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHH--------HHHHHH------HHHGS-------------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceee--------ehhhhh------hhhhc-------------
Confidence 589999999999999999999885 5788888875433210 112211 11111
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
+....+..++ .+.+.++|+++.++|........ +.|....+.+.+.+.+.+.+.++.
T Consensus 54 ------~~~~~i~~~~-------~~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vi 115 (141)
T PF00056_consen 54 ------PSPVRITSGD-------YEALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVI 115 (141)
T ss_dssp ------TEEEEEEESS-------GGGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEE
T ss_pred ------cccccccccc-------ccccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEE
Confidence 0122223333 25567889999999976543221 367777888888888877543443
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.03 E-value=2e-05 Score=60.39 Aligned_cols=50 Identities=22% Similarity=0.200 Sum_probs=35.1
Q ss_pred CCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhh
Q psy3626 9 ATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE 64 (189)
Q Consensus 9 atG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 64 (189)
++|++|+++++.|+++|++|+++++... .... ....+|+.+.+++...++
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~~-----~~~~~Dv~d~~s~~~l~~ 72 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTTKRA-LKPE-----PHPNLSIREIETTKDLLI 72 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcChhh-cccc-----cCCcceeecHHHHHHHHH
Confidence 3899999999999999999999876421 1110 123478888777666553
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.5e-05 Score=64.58 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=48.2
Q ss_pred ceEEEEcC----------------CChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhh-
Q psy3626 2 KKIAIFGA----------------TGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE- 64 (189)
Q Consensus 2 ~~i~ItGa----------------tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 64 (189)
++++|||| +|.+|.++++.|..+|++|++++++.+ .... . .+...|+++.+++.+.+.
T Consensus 189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~~--~--~~~~~dv~~~~~~~~~v~~ 263 (399)
T PRK05579 189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPTP--A--GVKRIDVESAQEMLDAVLA 263 (399)
T ss_pred CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccCC--C--CcEEEccCCHHHHHHHHHH
Confidence 58999999 899999999999999999999988753 2111 1 134568877766655553
Q ss_pred ---cCcceeeecc
Q psy3626 65 ---GKDGLEVCTL 74 (189)
Q Consensus 65 ---~~~~~~~~~~ 74 (189)
..|.+|+++.
T Consensus 264 ~~~~~DilI~~Aa 276 (399)
T PRK05579 264 ALPQADIFIMAAA 276 (399)
T ss_pred hcCCCCEEEEccc
Confidence 3455554443
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.2e-05 Score=62.23 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=30.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~ 35 (189)
|++|+|+|+||++|+.+++.|.++ ++++..+.++.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~ 37 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRS 37 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcc
Confidence 679999999999999999999987 77887776643
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.7e-05 Score=65.37 Aligned_cols=72 Identities=26% Similarity=0.234 Sum_probs=57.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHh-hhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKA-IEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~ 74 (189)
|+++|+|+ |.+|+.+++.|.+.|++|++++++++....... .++.++.+|.++++.++++ ++.+|.++++..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence 58999996 999999999999999999999998776655433 4577888898888888777 677776655543
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00011 Score=59.20 Aligned_cols=110 Identities=17% Similarity=0.110 Sum_probs=69.4
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
||+|+|++|.+|+.++..|...+. ++..+++++. . ...+-...|+.+.... ..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~-~-----~~~~g~~~Dl~d~~~~--~~------------ 61 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPA-M-----KALEGVVMELQDCAFP--LL------------ 61 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCc-c-----Cccceeeeehhhhccc--cc------------
Confidence 799999999999999999987642 4888888752 1 1122334555543210 00
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHC-CccEEEE
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEY-NVSVVSV 149 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~-~~~~~i~ 149 (189)
+ ... +. ....+.+.++|+||+++|........ ..|...++.+.+.+.+. +...++.
T Consensus 62 ----------~-~~~-i~------~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iii 123 (323)
T cd00704 62 ----------K-GVV-IT------TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVL 123 (323)
T ss_pred ----------C-CcE-Ee------cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEE
Confidence 0 111 11 12357788899999999976544221 35777788888888888 4554444
Q ss_pred e
Q psy3626 150 C 150 (189)
Q Consensus 150 i 150 (189)
+
T Consensus 124 v 124 (323)
T cd00704 124 V 124 (323)
T ss_pred E
Confidence 4
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.7e-05 Score=53.30 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=68.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
+++++.| .| .|..++..|.+.|++|++++.++...+......+.++..|+.+++-
T Consensus 18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~----------------------- 72 (134)
T PRK04148 18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL----------------------- 72 (134)
T ss_pred CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-----------------------
Confidence 4699999 58 8999999999999999999999876554444456778888877642
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
+..+++|.+++.-.+ .+..+.+++.+++.+...+|.
T Consensus 73 ----------------------~~y~~a~liysirpp----------~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 73 ----------------------EIYKNAKLIYSIRPP----------RDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred ----------------------HHHhcCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 334456667665322 567888999999998876665
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.3e-05 Score=59.50 Aligned_cols=42 Identities=26% Similarity=0.337 Sum_probs=32.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS 44 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~ 44 (189)
|||.|.| .|++|..++..|.+.|++|++++.+++..+.+...
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g 42 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNG 42 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTT
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhc
Confidence 6899998 69999999999999999999999998766654433
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.2e-05 Score=62.96 Aligned_cols=120 Identities=21% Similarity=0.227 Sum_probs=74.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||.|.| +|++|.....-|.+.||+|++++.++++...+......++.- .++.+++..-.
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~Ep------gLe~ll~~~~~------------- 60 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEP------GLEELLKENLA------------- 60 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCc------cHHHHHHhccc-------------
Confidence 6899999 799999999999999999999999988776554433333322 23333332200
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCcc-EEEEeccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVS-VVSVCLSA 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~i~iSS~ 153 (189)
.+-+.-..+..+++...|++|.+.|.+... ....+......+++...+...+ ++|++=|+
T Consensus 61 -----------~gRl~fTtd~~~a~~~adv~fIavgTP~~~-dg~aDl~~V~ava~~i~~~~~~~~vvV~KST 121 (414)
T COG1004 61 -----------SGRLRFTTDYEEAVKDADVVFIAVGTPPDE-DGSADLSYVEAVAKDIGEILDGKAVVVIKST 121 (414)
T ss_pred -----------cCcEEEEcCHHHHHhcCCEEEEEcCCCCCC-CCCccHHHHHHHHHHHHhhcCCCeEEEEcCC
Confidence 001112234566777788888888876554 3333444455555555544333 66666554
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.2e-05 Score=60.59 Aligned_cols=28 Identities=29% Similarity=0.379 Sum_probs=24.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcE
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEV 28 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v 28 (189)
|++|.|+||||++|+.+++.|.++++.+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~ 31 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPV 31 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCc
Confidence 5689999999999999999999876643
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.93 E-value=6.9e-05 Score=51.69 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=27.4
Q ss_pred eEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQ 36 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~ 36 (189)
||.|+|+||++|+.+++.|.++ .+++..+..+..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence 6899999999999999999997 566655554443
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.6e-05 Score=62.03 Aligned_cols=33 Identities=36% Similarity=0.424 Sum_probs=27.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEE-ecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTL-LRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~-~r~ 34 (189)
++|+|+||||++|+.+++.|.++ +.++..+ .++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~ 35 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSR 35 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccc
Confidence 58999999999999999999987 6787744 443
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.4e-05 Score=61.18 Aligned_cols=38 Identities=29% Similarity=0.353 Sum_probs=33.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
||+|.|+| .|.+|..++..|+++|++|++++|+++..+
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAA 39 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence 57899999 599999999999999999999999875443
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.3e-05 Score=58.25 Aligned_cols=63 Identities=21% Similarity=0.205 Sum_probs=48.9
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-----cEEEEecCCCCCCcc----------cCCceeEEeccccChhHHHHhhhc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-----EVCTLLRDPQRLPSE----------YHSKVEIIQGDVLKLADVKKAIEG 65 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-----~v~~~~r~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~ 65 (189)
.++|||++.++|-+++.+|++.+. ++.+.+|+-++.++. ...+++++..|+++..++.++.++
T Consensus 5 valITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 5 VALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred EEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 489999999999999999998743 466778887766532 124578899999998888777653
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.6e-05 Score=57.10 Aligned_cols=36 Identities=33% Similarity=0.260 Sum_probs=31.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
||++.|.| +|.+|..++++|.+.||+|++..|+.++
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~ 36 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPK 36 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChh
Confidence 78888888 7999999999999999999999666543
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00016 Score=59.70 Aligned_cols=53 Identities=25% Similarity=0.308 Sum_probs=39.3
Q ss_pred ceEEEEcC----------------CChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHH
Q psy3626 2 KKIAIFGA----------------TGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADV 59 (189)
Q Consensus 2 ~~i~ItGa----------------tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~ 59 (189)
++++|||| ||.+|.++++.|..+|++|+++.++.+.... .. ....|+++.+++
T Consensus 186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~---~~--~~~~~v~~~~~~ 254 (390)
T TIGR00521 186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTP---PG--VKSIKVSTAEEM 254 (390)
T ss_pred ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCC---CC--cEEEEeccHHHH
Confidence 57999998 4679999999999999999998876543211 11 245677776665
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.3e-05 Score=67.93 Aligned_cols=74 Identities=16% Similarity=0.047 Sum_probs=59.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCc-------------EEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhh
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLE-------------VCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIE 64 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~-------------v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~ 64 (189)
|++|+|+|+ |++|+..++.|.+. +.+ |++.+++++....+.. .+++.+..|+.|.+++.++++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 679999996 99999999999875 444 7777877665554322 357789999999999999999
Q ss_pred cCcceeeeccc
Q psy3626 65 GKDGLEVCTLL 75 (189)
Q Consensus 65 ~~~~~~~~~~~ 75 (189)
++|+|+.+++.
T Consensus 648 ~~DaVIsalP~ 658 (1042)
T PLN02819 648 QVDVVISLLPA 658 (1042)
T ss_pred CCCEEEECCCc
Confidence 99999988864
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.1e-05 Score=60.01 Aligned_cols=66 Identities=23% Similarity=0.204 Sum_probs=49.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|++|.|+| .|.+|..++..|++.|++|++++|++++.+.+...++ ....+...+++++|.++.+++
T Consensus 1 m~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~-------~~~~s~~~~~~~aDvVi~~vp 66 (296)
T PRK15461 1 MAAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGA-------TPAASPAQAAAGAEFVITMLP 66 (296)
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCC-------cccCCHHHHHhcCCEEEEecC
Confidence 78999999 5999999999999999999999998876654322221 112234556778888887775
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.9e-05 Score=61.43 Aligned_cols=35 Identities=31% Similarity=0.415 Sum_probs=29.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~ 35 (189)
|+||.|.|++|+.|..|++.|..+ ..++..+..+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~ 37 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE 37 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence 789999999999999999999998 55766655443
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00015 Score=58.16 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=30.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~ 35 (189)
|||.|+|++|.+|..++..|+..|+ +|++++|.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 6899999999999999999999876 489999853
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00066 Score=47.65 Aligned_cols=121 Identities=16% Similarity=0.169 Sum_probs=75.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccc--cChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDV--LKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++|+|.|+ |.+|+.++..|...|. ++++++.+.-....+.... -+-..|+ ...+.+++.+....+
T Consensus 3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~-~~~~~~vG~~Ka~~~~~~l~~~np---------- 70 (135)
T PF00899_consen 3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQF-LYTEEDVGKNKAEAAKERLQEINP---------- 70 (135)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCT-TS-GGGTTSBHHHHHHHHHHHHST----------
T ss_pred CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeeccccccc-ccccccchhHHHHHHHHHHHHhcC----------
Confidence 58999995 9999999999999997 6888887654444332210 0111233 334566666655432
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
.-++..+..++ +.+...+.++++|++|.+... ...-..+-+.|++.+. .+|..+..
T Consensus 71 -------~~~v~~~~~~~-~~~~~~~~~~~~d~vi~~~d~----------~~~~~~l~~~~~~~~~-p~i~~~~~ 126 (135)
T PF00899_consen 71 -------DVEVEAIPEKI-DEENIEELLKDYDIVIDCVDS----------LAARLLLNEICREYGI-PFIDAGVN 126 (135)
T ss_dssp -------TSEEEEEESHC-SHHHHHHHHHTSSEEEEESSS----------HHHHHHHHHHHHHTT--EEEEEEEE
T ss_pred -------ceeeeeeeccc-ccccccccccCCCEEEEecCC----------HHHHHHHHHHHHHcCC-CEEEEEee
Confidence 11455555555 556677888899999998532 3445567778888875 66654433
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=3.9e-05 Score=60.96 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=56.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCC---CCCCccc------CCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDP---QRLPSEY------HSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~---~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
++++|+|+ |++|++++..|.+.|.+ |+++.|++ ++...+. .....+...|+.+.+++...++.+|.+|+
T Consensus 127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilIN 205 (289)
T PRK12548 127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVN 205 (289)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEE
Confidence 57999998 89999999999999986 99999986 3332221 12334566788888888888888999998
Q ss_pred eccc
Q psy3626 72 CTLL 75 (189)
Q Consensus 72 ~~~~ 75 (189)
+++.
T Consensus 206 aTp~ 209 (289)
T PRK12548 206 ATLV 209 (289)
T ss_pred eCCC
Confidence 8876
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0001 Score=61.93 Aligned_cols=69 Identities=23% Similarity=0.356 Sum_probs=51.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHh-hhcCccee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKA-IEGKDGLE 70 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~-~~~~~~~~ 70 (189)
|++++|.|+ |.+|+.+++.|.+.|++|++++++++....+.. .+..++.+|.++++.++++ ++.++.++
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi 302 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFI 302 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence 478999996 999999999999999999999998776544322 3566788888888776443 34454443
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00042 Score=55.91 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=69.5
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
||.|+|++|.+|+.++..|...+. ++.++++.+... ...-...|+.+..... ..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------~a~g~~~Dl~d~~~~~--~~----------- 61 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------VLEGVVMELMDCAFPL--LD----------- 61 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------ccceeEeehhcccchh--cC-----------
Confidence 689999999999999999987543 588888864421 1223345555543110 00
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHC-CccEEEE
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEY-NVSVVSV 149 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~-~~~~~i~ 149 (189)
.+ +. ..+..+.+.++|+||+++|....... ...|+..++.+.+.+.+. +.+.+++
T Consensus 62 ------------~~--~~-----~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iii 122 (324)
T TIGR01758 62 ------------GV--VP-----THDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVL 122 (324)
T ss_pred ------------ce--ec-----cCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 00 00 01234678889999999998654322 136677788888888887 3544444
Q ss_pred ecc
Q psy3626 150 CLS 152 (189)
Q Consensus 150 iSS 152 (189)
+-|
T Consensus 123 vvs 125 (324)
T TIGR01758 123 VVG 125 (324)
T ss_pred EeC
Confidence 433
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.71 E-value=6.6e-05 Score=57.17 Aligned_cols=38 Identities=29% Similarity=0.286 Sum_probs=34.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
|+|.|+||+|.+|+.++..|.+.|++|++++|++++..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~ 38 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAE 38 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHH
Confidence 57999998999999999999999999999999876554
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00018 Score=56.71 Aligned_cols=112 Identities=21% Similarity=0.248 Sum_probs=75.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++|.++| .|-.|..++.+|+++||+|++..|++++..+. ...+ ..-..+..++.+++|++|.+..
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~G-------a~~a~s~~eaa~~aDvVitmv~------ 66 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAG-------ATVAASPAEAAAEADVVITMLP------ 66 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcC-------CcccCCHHHHHHhCCEEEEecC------
Confidence 4799999 69999999999999999999999998874322 1111 1122344667788888877765
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-CCCCcceehhhHHHHHHHHHHCCc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN-DLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
+..++.+.+.+.+.+.....+.. ..+..++....++.+.+.+++.|.
T Consensus 67 -----------------~~~~V~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~ 114 (286)
T COG2084 67 -----------------DDAAVRAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGL 114 (286)
T ss_pred -----------------CHHHHHHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 56666666655444444322221 112334566778888888888874
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.70 E-value=5e-06 Score=58.59 Aligned_cols=74 Identities=19% Similarity=0.210 Sum_probs=52.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++++|.|+ |..|+.++..|...|.+ |+++.|+.++...+.... .-........+++...+..+|.+|.+++...
T Consensus 13 ~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~-~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 13 KRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF-GGVNIEAIPLEDLEEALQEADIVINATPSGM 87 (135)
T ss_dssp SEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH-TGCSEEEEEGGGHCHHHHTESEEEE-SSTTS
T ss_pred CEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc-CccccceeeHHHHHHHHhhCCeEEEecCCCC
Confidence 58999996 99999999999999986 999999987665442110 0001112233455578899999998887643
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00047 Score=56.25 Aligned_cols=38 Identities=29% Similarity=0.382 Sum_probs=30.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRL 38 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~ 38 (189)
|++|+|+||||++|+.+++.|..+. .++..+.++++..
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~ 41 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSA 41 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhc
Confidence 3589999999999999999999874 4888875655433
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00034 Score=47.54 Aligned_cols=58 Identities=29% Similarity=0.436 Sum_probs=46.1
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 62 (189)
|+|.|. |.+|+.+++.|.+.+.+|+++.++++...........++.+|.++++.++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a 58 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERA 58 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhc
Confidence 578885 9999999999999777999999998776655556678888888888876654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00038 Score=56.56 Aligned_cols=27 Identities=30% Similarity=0.412 Sum_probs=23.9
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEE
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVC 29 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~ 29 (189)
+|+|.||||++|+.+++.|.+++|.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~ 27 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPID 27 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChh
Confidence 589999999999999999998877643
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.61 E-value=8e-05 Score=59.27 Aligned_cols=38 Identities=32% Similarity=0.439 Sum_probs=33.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
.++|-||+||.|+.++++|..+|.+-.+..|+..++..
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~ 45 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDA 45 (382)
T ss_pred eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHH
Confidence 58999999999999999999999988888888766553
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00038 Score=58.13 Aligned_cols=43 Identities=16% Similarity=0.225 Sum_probs=37.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS 44 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~ 44 (189)
||+|.|+| .|++|..++..|.++|++|++++++++..+.+...
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g 45 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRG 45 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCC
Confidence 57899999 59999999999999999999999998776654333
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00022 Score=62.22 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=54.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh-hhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~ 70 (189)
++++|.| .|.+|+.+++.|.++|+++++++++++..+...+.+..++.+|.++++.++++ +++++.++
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv 469 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIV 469 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEE
Confidence 3688888 59999999999999999999999998877665556678899999998877665 34454443
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0017 Score=52.08 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=31.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~ 39 (189)
+||.|+|+ |.+|+.++..|+..| +++.+++|+++...
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~ 39 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAE 39 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhh
Confidence 47999995 999999999999988 58999999876544
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0019 Score=52.09 Aligned_cols=113 Identities=12% Similarity=0.058 Sum_probs=66.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+||.|+|++|.+|..++..|...+. ++.+++..+.. + .+.-...|+.+....
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~-~-----~a~g~a~Dl~~~~~~--------------- 61 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQAL-K-----ALEGVAMELEDCAFP--------------- 61 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcc-c-----ccceeehhhhhcccc---------------
Confidence 5899999999999999999988764 67777775322 0 111122333322100
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCc-cEEE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNV-SVVS 148 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~-~~~i 148 (189)
+..++++..+ .-+.+.++|++|.++|........ ..|....+.+.+.+.+.+. ..++
T Consensus 62 ----------~~~~~~i~~~-------~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~ii 124 (322)
T cd01338 62 ----------LLAEIVITDD-------PNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKV 124 (322)
T ss_pred ----------ccCceEEecC-------cHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 0001222111 135677889999999876543221 3567778888888888763 4444
Q ss_pred Eecc
Q psy3626 149 VCLS 152 (189)
Q Consensus 149 ~iSS 152 (189)
.+-|
T Consensus 125 ivvs 128 (322)
T cd01338 125 LVVG 128 (322)
T ss_pred EEec
Confidence 4433
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0025 Score=45.07 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=72.7
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEE-ecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEII-QGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
+|+|.|. |.+|..+++.|...|. ++++++.+.-....+.+.. +. ..|+- ..+.+++.++...+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~--~~~~~~vG~~Ka~~~~~~l~~~~p---------- 67 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQF--LARQADIGKPKAEVAARRLNELNP---------- 67 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccc--cCChhHCCChHHHHHHHHHHHHCC----------
Confidence 5899996 9999999999999997 6888887755544432111 11 23332 23444555544321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
.-++..+...+.+. ...+.+.+.|++|.+... ......+.+.|++.+. .+|..++.
T Consensus 68 -------~v~i~~~~~~~~~~-~~~~~~~~~diVi~~~d~----------~~~~~~l~~~~~~~~i-~~i~~~~~ 123 (143)
T cd01483 68 -------GVNVTAVPEGISED-NLDDFLDGVDLVIDAIDN----------IAVRRALNRACKELGI-PVIDAGGL 123 (143)
T ss_pred -------CcEEEEEeeecChh-hHHHHhcCCCEEEECCCC----------HHHHHHHHHHHHHcCC-CEEEEcCC
Confidence 11344444444333 336777899999987533 3445667788888874 45554444
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00062 Score=57.69 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=37.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSK 45 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~ 45 (189)
||+|.|.| .|++|..++..|.+. |++|++++.++++...+....
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~ 46 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQ 46 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCC
Confidence 89999999 599999999999988 588999999887776654443
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00099 Score=54.52 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=26.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCc---EEEEec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLE---VCTLLR 33 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~---v~~~~r 33 (189)
|++|.|.||||++|+.+++.++++ ... +..+..
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss 37 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST 37 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence 889999999999999999977765 555 555444
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0022 Score=50.37 Aligned_cols=127 Identities=15% Similarity=0.200 Sum_probs=75.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |.+|+++++.|...| -++++++.+.-....+.+. +.....|+- ..+.+++.+....+
T Consensus 31 s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ-~~~~~~~vG~~Kve~~~~rl~~INP---------- 98 (268)
T PRK15116 31 AHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQ-IHALRDNVGLAKAEVMAERIRQINP---------- 98 (268)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccc-cccChhhcChHHHHHHHHHHHhHCC----------
Confidence 47999995 999999999999998 5889988775555443211 111122332 22344444443321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhc-CCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIE-GKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
.-++..+. +..+++...+.+. +.|+||.+... ...-..+.+.|++.+. .+|..+++++-.
T Consensus 99 -------~~~V~~i~-~~i~~e~~~~ll~~~~D~VIdaiD~----------~~~k~~L~~~c~~~~i-p~I~~gGag~k~ 159 (268)
T PRK15116 99 -------ECRVTVVD-DFITPDNVAEYMSAGFSYVIDAIDS----------VRPKAALIAYCRRNKI-PLVTTGGAGGQI 159 (268)
T ss_pred -------CcEEEEEe-cccChhhHHHHhcCCCCEEEEcCCC----------HHHHHHHHHHHHHcCC-CEEEECCcccCC
Confidence 11333342 2334555666664 69999998653 2334457888888875 566555555544
Q ss_pred CC
Q psy3626 158 EP 159 (189)
Q Consensus 158 ~~ 159 (189)
++
T Consensus 160 dp 161 (268)
T PRK15116 160 DP 161 (268)
T ss_pred CC
Confidence 43
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00092 Score=53.48 Aligned_cols=37 Identities=27% Similarity=0.190 Sum_probs=32.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
||||.|+|+ |.+|..++..+...|. +|.+++++++..
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~ 39 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVP 39 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchh
Confidence 889999998 9999999999998865 899999876543
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0025 Score=47.89 Aligned_cols=93 Identities=16% Similarity=0.148 Sum_probs=58.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++|+|.|+ |.+|+.++..|...|. ++++++++.-..+.+.+.. +...|+-. .+.+++.++...+
T Consensus 22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~--~~~~~iG~~Ka~~~~~~l~~inp---------- 88 (200)
T TIGR02354 22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQ--YKASQVGEPKTEALKENISEINP---------- 88 (200)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEccccccccc--CChhhCCCHHHHHHHHHHHHHCC----------
Confidence 47999996 9999999999999998 6999998833333222111 22233422 3344444444321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEe
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA 115 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~ 115 (189)
.-++..+..++ +.+.+.+.+.++|+|+.+
T Consensus 89 -------~~~i~~~~~~i-~~~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 89 -------YTEIEAYDEKI-TEENIDKFFKDADIVCEA 117 (200)
T ss_pred -------CCEEEEeeeeC-CHhHHHHHhcCCCEEEEC
Confidence 11344444444 446677788899999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0025 Score=51.84 Aligned_cols=120 Identities=23% Similarity=0.265 Sum_probs=74.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccc----cChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDV----LKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~----~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
.+|+|.|+ |++|+.++..|...|. ++++++++.-..+.+.+. .-+-..|+ ...+..++.++....
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ-~l~~~~dig~g~~Ka~aa~~~l~~inp-------- 94 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQ-QLYTESDVKNNLPKAVAAKKRLEEINS-------- 94 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCcc-ccccHHHhcCCCcHHHHHHHHHHHHCC--------
Confidence 47999996 9999999999999997 899999876555554322 11222333 223334444443321
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
.-++..+..++ +.+.+.+.+.+.|+|+.+.. |...-..+-+.|.+.+. .+|+.++
T Consensus 95 ---------~v~v~~~~~~~-~~~~~~~~~~~~DlVid~~D----------n~~~r~~ln~~~~~~~i-P~i~~~~ 149 (339)
T PRK07688 95 ---------DVRVEAIVQDV-TAEELEELVTGVDLIIDATD----------NFETRFIVNDAAQKYGI-PWIYGAC 149 (339)
T ss_pred ---------CcEEEEEeccC-CHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHHHHHhCC-CEEEEee
Confidence 11344555555 34566778899999999843 23333446677777774 4555443
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00092 Score=55.06 Aligned_cols=54 Identities=17% Similarity=0.196 Sum_probs=44.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|++|+|.||.|.+|+.++..|.++|++|++++|++. +.....++++|.|+.+++
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEeCc
Confidence 468999999999999999999999999999998531 133456778898887775
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.001 Score=55.00 Aligned_cols=38 Identities=37% Similarity=0.327 Sum_probs=31.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
|+|.|.| .|++|..++..|. .|++|+++++++++.+.+
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l 38 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAML 38 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHH
Confidence 3799999 5999999996665 599999999998776654
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00044 Score=59.88 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=49.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 62 (189)
+++|.| .|.+|+.++++|.++|+++++++++++..+...+.+...+.+|.++++.++++
T Consensus 419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a 477 (558)
T PRK10669 419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLA 477 (558)
T ss_pred CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhc
Confidence 678888 49999999999999999999999998777665556778888899888776643
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0032 Score=48.30 Aligned_cols=119 Identities=15% Similarity=0.115 Sum_probs=72.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |.+|.++++.|...|. ++++++.+.-..+.+.+... +...|+- ..+.+++.++...+
T Consensus 22 ~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l-~~~~diG~~Ka~~~~~~l~~~np---------- 89 (228)
T cd00757 22 ARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQIL-HTEADVGQPKAEAAAERLRAINP---------- 89 (228)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccc-cChhhCCChHHHHHHHHHHHhCC----------
Confidence 47999995 9999999999999986 67777776544444322111 1112342 23455555554422
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
.-++..+...+ +.+++.+.+.++|+||.+... ...-..+-+.|.+.+. .+|+.+
T Consensus 90 -------~~~i~~~~~~i-~~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~i-p~i~~g 143 (228)
T cd00757 90 -------DVEIEAYNERL-DAENAEELIAGYDLVLDCTDN----------FATRYLINDACVKLGK-PLVSGA 143 (228)
T ss_pred -------CCEEEEeccee-CHHHHHHHHhCCCEEEEcCCC----------HHHHHHHHHHHHHcCC-CEEEEE
Confidence 11344444444 346677788899999998643 2333456677787774 455443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0016 Score=50.87 Aligned_cols=66 Identities=27% Similarity=0.249 Sum_probs=41.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEe-cCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLL-RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|++|.|+|++|.+|+.+++.+.+. +.++..+. ++++..... -..++...++++.+++.+|.++.++
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFT 68 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECC
Confidence 789999999999999999888764 67877654 444333221 1122323344555555666655343
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0017 Score=52.88 Aligned_cols=26 Identities=27% Similarity=0.371 Sum_probs=23.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE 27 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~ 27 (189)
++|.|.||||++|+.+++.|.+++|.
T Consensus 8 ~kVaVvGAtG~vG~eLlrlL~~~~hP 33 (344)
T PLN02383 8 PSVAIVGVTGAVGQEFLSVLTDRDFP 33 (344)
T ss_pred CeEEEEcCCChHHHHHHHHHHhCCCC
Confidence 48999999999999999999987774
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.005 Score=47.32 Aligned_cols=126 Identities=14% Similarity=0.161 Sum_probs=73.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |.+|+++++.|...|. ++++++.+.-....+.+. ......|+- ..+.+++.+....+
T Consensus 12 ~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq-~~~~~~diG~~Kae~~~~~l~~inP---------- 79 (231)
T cd00755 12 AHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQ-IHALLSTVGKPKVEVMAERIRDINP---------- 79 (231)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcch-hCcChhhCCCcHHHHHHHHHHHHCC----------
Confidence 47999995 9999999999999986 788887765444433211 111123332 23444555544321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhc-CCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIE-GKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
.-++..+...+ +++.....+. +.|+||.+... ...-..+.+.|++.+. .+|...+.++-.
T Consensus 80 -------~~~V~~~~~~i-~~~~~~~l~~~~~D~VvdaiD~----------~~~k~~L~~~c~~~~i-p~I~s~g~g~~~ 140 (231)
T cd00755 80 -------ECEVDAVEEFL-TPDNSEDLLGGDPDFVVDAIDS----------IRAKVALIAYCRKRKI-PVISSMGAGGKL 140 (231)
T ss_pred -------CcEEEEeeeec-CHhHHHHHhcCCCCEEEEcCCC----------HHHHHHHHHHHHHhCC-CEEEEeCCcCCC
Confidence 11334444333 3444555553 58999998533 3344567888888874 555444444333
Q ss_pred C
Q psy3626 158 E 158 (189)
Q Consensus 158 ~ 158 (189)
+
T Consensus 141 d 141 (231)
T cd00755 141 D 141 (231)
T ss_pred C
Confidence 3
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0032 Score=50.87 Aligned_cols=113 Identities=16% Similarity=0.042 Sum_probs=64.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+||.|+|++|.+|..++..|...+. ++..+++.+.. + .+.-...|+.+.... ..
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~-~-----~~~g~a~Dl~~~~~~--~~---------- 65 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPAL-K-----ALEGVVMELDDCAFP--LL---------- 65 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcc-c-----ccceeehhhhhhhhh--hc----------
Confidence 35899999999999999999887653 57777775321 0 011122333332100 00
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCC-cc-E
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYN-VS-V 146 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~-~~-~ 146 (189)
+ ...+..+ .-+.+.++|++|.++|....... ...|....+.+.+.+.+.. .+ .
T Consensus 66 ------------~-~~~i~~~-------~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~i 125 (326)
T PRK05442 66 ------------A-GVVITDD-------PNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVK 125 (326)
T ss_pred ------------C-CcEEecC-------hHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 0 1111111 23567788999999886543321 2356677888888888743 34 4
Q ss_pred EEEec
Q psy3626 147 VSVCL 151 (189)
Q Consensus 147 ~i~iS 151 (189)
++.+|
T Consensus 126 iivvs 130 (326)
T PRK05442 126 VLVVG 130 (326)
T ss_pred EEEeC
Confidence 44443
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00012 Score=52.86 Aligned_cols=35 Identities=34% Similarity=0.415 Sum_probs=31.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
||.|+|| |-.|.+++..|..+|++|+.+.|+++..
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~ 35 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQI 35 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHH
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHH
Confidence 6899996 9999999999999999999999986443
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0028 Score=50.83 Aligned_cols=33 Identities=21% Similarity=0.051 Sum_probs=28.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~ 34 (189)
|||.|+|++|.+|+.++..|...+ .++.+++.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~ 35 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV 35 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC
Confidence 589999999999999999998876 467888776
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00092 Score=56.61 Aligned_cols=119 Identities=9% Similarity=0.090 Sum_probs=69.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC----ceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS----KVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|.+|.|+| .|-.|+.++..|+++|++|.+..|+++..+.+... +..... ..+++++...++.+|.++.++...
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil~v~~~ 77 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVILLIKAG 77 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEEEeCCh
Confidence 77999999 59999999999999999999999998775543211 111111 123444444444566666555421
Q ss_pred CCCCCCccccCceeEEeccccCH-HHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKL-ADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.+ +.+. +.+...+..-|+++.+... ....+....+.+.+.|+ +++=
T Consensus 78 ~~-----------------v~~vi~~l~~~L~~g~iIID~gn~---------~~~dt~~r~~~l~~~Gi-~fld 124 (470)
T PTZ00142 78 EA-----------------VDETIDNLLPLLEKGDIIIDGGNE---------WYLNTERRIKRCEEKGI-LYLG 124 (470)
T ss_pred HH-----------------HHHHHHHHHhhCCCCCEEEECCCC---------CHHHHHHHHHHHHHcCC-eEEc
Confidence 11 0000 2233333444555554222 34556777777877775 4553
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00097 Score=53.19 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=48.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+| .|.+|..+++.|.+.|++|.+++|+++....+...+... ..+.+++...++.+|.++.++.
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~vp 68 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVMVP 68 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEEcC
Confidence 4799999 599999999999999999999999987655443222111 1244455555566787776665
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00017 Score=57.96 Aligned_cols=73 Identities=23% Similarity=0.319 Sum_probs=47.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCc--eeE-----EeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSK--VEI-----IQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~--~~~-----~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+|.|+|+ |.+|..++..|.+.|++|++++|+++..+.+.... ... ....+....+.++.++++|.++.++
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 899999995 99999999999999999999999865443321110 000 0001111223445566778777776
Q ss_pred c
Q psy3626 74 L 74 (189)
Q Consensus 74 ~ 74 (189)
.
T Consensus 80 ~ 80 (325)
T PRK00094 80 P 80 (325)
T ss_pred C
Confidence 5
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0044 Score=49.56 Aligned_cols=111 Identities=23% Similarity=0.263 Sum_probs=68.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+||.|+|+ |++|+.++-.|+.++ .++.+++..++.+.-. ..|+.+.... .
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~--------a~DL~~~~~~---~---------------- 52 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGV--------ALDLSHAAAP---L---------------- 52 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccch--------hcchhhcchh---c----------------
Confidence 58999998 999999999998774 4788888885444321 1222221110 0
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
... ..+.++ .+ -+.+.++|+++.++|....... ...|..-++.+.+...+.+.+-++++-|
T Consensus 53 ------~~~-~~i~~~-~~----y~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 53 ------GSD-VKITGD-GD----YEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred ------cCc-eEEecC-CC----hhhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 001 111221 11 2456788999999987665532 2367777888888888877655555444
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0045 Score=50.32 Aligned_cols=118 Identities=18% Similarity=0.211 Sum_probs=72.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc----ChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL----KLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++|+|.|+ |.+|+.++..|...|. ++++++++.-..+.+.+. .-+-..|+. +.+.+++.++....
T Consensus 25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ-~l~~~~d~~~g~~Ka~aa~~~l~~inp-------- 94 (338)
T PRK12475 25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQ-QLYTEEDAKQKKPKAIAAKEHLRKINS-------- 94 (338)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCcc-ccccHHHccCCccHHHHHHHHHHHHCC--------
Confidence 47999996 9999999999999997 788899886555554322 112223331 23344444444321
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.-++..+..++. .+.+.+.+.+.|+||.+... ...-..+-+.|.+.+.+ +|+.
T Consensus 95 ---------~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~----------~~~r~~in~~~~~~~ip-~i~~ 147 (338)
T PRK12475 95 ---------EVEIVPVVTDVT-VEELEELVKEVDLIIDATDN----------FDTRLLINDLSQKYNIP-WIYG 147 (338)
T ss_pred ---------CcEEEEEeccCC-HHHHHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCC-EEEE
Confidence 114555555653 45677888999999998632 22223344667777754 4443
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0006 Score=54.60 Aligned_cols=73 Identities=23% Similarity=0.310 Sum_probs=53.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEe-----ccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQ-----GDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~-----~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|++|.|+|+ |-=|.+|+..|.+.|++|+...|+++...... +.+.++.+ .++.-..+++.+++++|.++..+
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av 79 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV 79 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence 789999996 99999999999999999999999976554432 22333343 22223456888888888777666
Q ss_pred c
Q psy3626 74 L 74 (189)
Q Consensus 74 ~ 74 (189)
+
T Consensus 80 P 80 (329)
T COG0240 80 P 80 (329)
T ss_pred C
Confidence 5
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0044 Score=47.01 Aligned_cols=122 Identities=15% Similarity=0.091 Sum_probs=73.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|+.++..|...|. ++++++.+.-..+.+.+.. +...|+-. .+.+++.++...+
T Consensus 29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~--~~~~dvG~~Ka~~a~~~l~~lnp---------- 95 (212)
T PRK08644 29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQ--YFISQIGMPKVEALKENLLEINP---------- 95 (212)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccE--eehhhCCChHHHHHHHHHHHHCC----------
Confidence 47999995 9999999999999986 5888888754444443332 33445432 2333443433211
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHC-CccEEEEecccee
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEY-NVSVVSVCLSAFL 155 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~~i~iSS~~~ 155 (189)
.-++..+...+. .+++.+.+.++|+||.+.. +...-..+.+.|.+. +. .+|+.+...+
T Consensus 96 -------~v~v~~~~~~i~-~~~~~~~~~~~DvVI~a~D----------~~~~r~~l~~~~~~~~~~-p~I~~~~~~~ 154 (212)
T PRK08644 96 -------FVEIEAHNEKID-EDNIEELFKDCDIVVEAFD----------NAETKAMLVETVLEHPGK-KLVAASGMAG 154 (212)
T ss_pred -------CCEEEEEeeecC-HHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHHHHhCCC-CEEEeehhhc
Confidence 113444444443 3556677889999998842 233344566777776 63 5555444433
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0067 Score=46.91 Aligned_cols=117 Identities=16% Similarity=0.141 Sum_probs=72.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|+.++..|...|. ++++++.+.-..+.+.+.. -+-..|+-. .+.+++.+....+
T Consensus 25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~-l~~~~diG~~Ka~~a~~~l~~inp---------- 92 (240)
T TIGR02355 25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQV-LHSDANIGQPKVESAKDALTQINP---------- 92 (240)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccce-eeeHhhCCCcHHHHHHHHHHHHCC----------
Confidence 47999995 9999999999999985 7888888766665553321 122245533 3444555544321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.-++..+...+ +.+++.+.+.+.|+||.+... ...-..+-+.|.+.++ .+|+
T Consensus 93 -------~v~i~~~~~~i-~~~~~~~~~~~~DlVvd~~D~----------~~~r~~ln~~~~~~~i-p~v~ 144 (240)
T TIGR02355 93 -------HIAINPINAKL-DDAELAALIAEHDIVVDCTDN----------VEVRNQLNRQCFAAKV-PLVS 144 (240)
T ss_pred -------CcEEEEEeccC-CHHHHHHHhhcCCEEEEcCCC----------HHHHHHHHHHHHHcCC-CEEE
Confidence 11344444333 345677888999999998532 2333445577777774 4444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=52.29 Aligned_cols=67 Identities=15% Similarity=0.134 Sum_probs=48.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|. |.+|+.+++.|...|.+|++..|+++........... ....+++.+.++++|.++.+++
T Consensus 152 k~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~-----~~~~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 152 SNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLI-----PFPLNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-----eecHHHHHHHhccCCEEEECCC
Confidence 58999996 9999999999999999999999987543321111111 1234456777788888887664
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00079 Score=56.59 Aligned_cols=66 Identities=27% Similarity=0.233 Sum_probs=46.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+|+||+|.+|+.++..|.+.|++|++++|+++....... .++. -..+....++++|.++++++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-------~~~~~~e~~~~aDvVIlavp 67 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-------YANDNIDAAKDADIVIISVP 67 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-------eccCHHHHhccCCEEEEecC
Confidence 589999999999999999999999999999998755322111 1111 11223455677888777665
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0035 Score=47.17 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=71.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |.+|+.+++.|...|. ++++++++.-..+.+.+. .-+-..|+- ..+.+++.++...+
T Consensus 22 ~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq-~l~~~~diG~~Ka~~~~~~l~~~np---------- 89 (202)
T TIGR02356 22 SHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQ-ILFTEEDVGRPKVEVAAQRLRELNS---------- 89 (202)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhh-hccChhhCCChHHHHHHHHHHHhCC----------
Confidence 47999995 9999999999999996 889988875444443211 111122332 23344444443321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
.-++..+...+ +.+++.+.+.+.|++|.+... ...-..+-+.|++.+. .+|+.+
T Consensus 90 -------~v~i~~~~~~i-~~~~~~~~~~~~D~Vi~~~d~----------~~~r~~l~~~~~~~~i-p~i~~~ 143 (202)
T TIGR02356 90 -------DIQVTALKERV-TAENLELLINNVDLVLDCTDN----------FATRYLINDACVALGT-PLISAA 143 (202)
T ss_pred -------CCEEEEehhcC-CHHHHHHHHhCCCEEEECCCC----------HHHHHHHHHHHHHcCC-CEEEEE
Confidence 01333333333 345667788899999988532 2333446677788774 455544
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0024 Score=51.54 Aligned_cols=111 Identities=16% Similarity=0.112 Sum_probs=66.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecCCCC--CCcccCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRDPQR--LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
.||.|+|++|++|..++..|...+. ++..+++.+.. +.. ...|+.+...
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g--------~a~Dl~~~~~-------------- 61 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEG--------VAMELEDCAF-------------- 61 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccch--------HHHHHhhccc--------------
Confidence 3899999999999999999988763 67777775421 211 1112221110
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCc-cE
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNV-SV 146 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~-~~ 146 (189)
| ..+ ...+..+ .-+.+.++|+||.++|....... ...|....+.+.+.+.+.+. +.
T Consensus 62 -----~-----~~~-~~~i~~~-------~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~ 123 (323)
T TIGR01759 62 -----P-----LLA-GVVATTD-------PEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDV 123 (323)
T ss_pred -----c-----ccC-CcEEecC-------hHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCe
Confidence 0 000 1111111 23567788999999997654322 23567778888888888865 54
Q ss_pred EEEecc
Q psy3626 147 VSVCLS 152 (189)
Q Consensus 147 ~i~iSS 152 (189)
++.+-|
T Consensus 124 iiivvs 129 (323)
T TIGR01759 124 KVLVVG 129 (323)
T ss_pred EEEEeC
Confidence 544433
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0029 Score=50.73 Aligned_cols=110 Identities=22% Similarity=0.309 Sum_probs=67.4
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||.|.|+ |.+|..++..|+..+. ++.+++..++.+... ..|+.+...+ .
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~--------a~DL~~~~~~---~----------------- 51 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGE--------ALDFHHATAL---T----------------- 51 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHH--------HHHHHhhhcc---C-----------------
Confidence 6899997 9999999999988864 688888765443311 1122211000 0
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-------ceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-------TVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-------~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
.+.++++..+| -+.+.++|++|.++|........ ..|....+.+.+.+.+.+..-++.+-|
T Consensus 52 ----~~~~~~i~~~~-------y~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs 119 (307)
T cd05290 52 ----YSTNTKIRAGD-------YDDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT 119 (307)
T ss_pred ----CCCCEEEEECC-------HHHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 00123333333 25567889999999875543221 367777888888888887655555444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0061 Score=49.08 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=30.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~ 39 (189)
+||.|+|+ |.+|..++..|...+. ++.+++++++.+.
T Consensus 7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~ 45 (315)
T PRK00066 7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAE 45 (315)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhH
Confidence 48999997 9999999999998875 7888888765543
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00066 Score=59.52 Aligned_cols=71 Identities=18% Similarity=0.251 Sum_probs=56.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh-hhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~ 73 (189)
++++|.|. |.+|+.+++.|.++|+++++++.+++..+.....+..++.+|.++++-++++ ++.++.++++.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~ 472 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAI 472 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence 46889995 9999999999999999999999998877766556788999999999887753 34555544443
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00086 Score=53.30 Aligned_cols=66 Identities=20% Similarity=0.239 Sum_probs=47.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..+++.|.+.|++|.+++|+++........++. -.++..++++++|.++.+++
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~-------~~~~~~e~~~~~d~vi~~vp 67 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAE-------TASTAKAVAEQCDVIITMLP 67 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe-------ecCCHHHHHhcCCEEEEeCC
Confidence 56899999 59999999999999999999999987655432222211 11234456678888887775
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0013 Score=45.63 Aligned_cols=34 Identities=35% Similarity=0.554 Sum_probs=28.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHH-cCCcEEEE-ecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK-QGLEVCTL-LRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~-~g~~v~~~-~r~~ 35 (189)
|||.|.|.+|.+|+.+++.+.+ .++++.+. +|++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence 5899999999999999999999 58886655 4444
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >KOG0409|consensus | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0014 Score=51.65 Aligned_cols=111 Identities=18% Similarity=0.220 Sum_probs=67.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++|..+| -|-.|+..+.+|++.||+|++++|+.++...+...+. .-.++-.+..+.+|.+|.+.+
T Consensus 36 ~~iGFIG-LG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga-------~v~~sPaeVae~sDvvitmv~------- 100 (327)
T KOG0409|consen 36 TRIGFIG-LGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGA-------RVANSPAEVAEDSDVVITMVP------- 100 (327)
T ss_pred ceeeEEe-eccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhch-------hhhCCHHHHHhhcCEEEEEcC-------
Confidence 5788888 6999999999999999999999999877655422211 112233444556666665554
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--CCcceehhhHHHHHHHHHHCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--SPTTVMSEGMKNIVTAMKEYN 143 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~ 143 (189)
++.++.+.+.+.+.++....+.... +..++.....+.+.++++..+
T Consensus 101 ----------------~~~~v~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~ 148 (327)
T KOG0409|consen 101 ----------------NPKDVKDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKG 148 (327)
T ss_pred ----------------ChHhhHHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCC
Confidence 4555556666655555543332222 222334444555555555444
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0044 Score=45.50 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=69.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+|+|.|+ |.+|..++..|...|. ++++++.+.-..+.+.+.. +...|+-. .+..++.++...+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~--~~~~~vg~~Ka~~~~~~l~~lnp----------- 66 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQ--YFLSQIGEPKVEALKENLREINP----------- 66 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhccc--ccHhhCCChHHHHHHHHHHHHCC-----------
Confidence 5899995 9999999999999997 5999988764444432222 22334432 3334444443321
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHC-CccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEY-NVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~~i~i 150 (189)
.-++..+...+ +.+.+.+.+++.|+||.+... ...-..+.+.+.+. +. .+|+-
T Consensus 67 ------~v~i~~~~~~~-~~~~~~~~l~~~DlVi~~~d~----------~~~r~~i~~~~~~~~~i-p~i~~ 120 (174)
T cd01487 67 ------FVKIEAINIKI-DENNLEGLFGDCDIVVEAFDN----------AETKAMLAESLLGNKNK-PVVCA 120 (174)
T ss_pred ------CCEEEEEEeec-ChhhHHHHhcCCCEEEECCCC----------HHHHHHHHHHHHHHCCC-CEEEE
Confidence 11344444444 335567788899999998322 22234466676665 53 45543
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0026 Score=50.93 Aligned_cols=52 Identities=23% Similarity=0.223 Sum_probs=42.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|.| .|.+|..++..|.+.|++|+++.|++. .++.++++++|.++++++
T Consensus 5 m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~--------------------~~~~~~~~~advvi~~vp 56 (308)
T PRK14619 5 KTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG--------------------LSLAAVLADADVIVSAVS 56 (308)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC--------------------CCHHHHHhcCCEEEEECC
Confidence 5899999 599999999999999999999999753 234466678888877775
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0061 Score=46.43 Aligned_cols=139 Identities=15% Similarity=0.182 Sum_probs=84.5
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecCCCCCC----cccCC--ceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRDPQRLP----SEYHS--KVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~----~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++|+|- ...|+..+++.|.++|.++......+ ++. ++... .--+++||+++.++++..++.
T Consensus 7 K~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~-------- 77 (259)
T COG0623 7 KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFAT-------- 77 (259)
T ss_pred ceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHH--------
Confidence 68899986 35789999999999999987776654 222 12111 234788999988888877743
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcc-----------eehhhHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTT-----------VMSEGMKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~-----------~~~~~~~~ll~~ 138 (189)
+.+.++..|.+||+++....+ ...+ +.......+.++
T Consensus 78 ----------------------------i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~ 129 (259)
T COG0623 78 ----------------------------IKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKA 129 (259)
T ss_pred ----------------------------HHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHH
Confidence 567778899999998865422 1111 222223344444
Q ss_pred HHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.. +.+.+|-++ |.+.-..-+.|+-....|.+.|...|
T Consensus 130 a~~lM~~ggSiltLt----Ylgs~r~vPnYNvMGvAKAaLEasvR 170 (259)
T COG0623 130 ARPLMNNGGSILTLT----YLGSERVVPNYNVMGVAKAALEASVR 170 (259)
T ss_pred HHHhcCCCCcEEEEE----eccceeecCCCchhHHHHHHHHHHHH
Confidence 4431 223444322 22222344567777777877775554
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0056 Score=48.44 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=72.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |++|..++..|...|. ++++++.+.-..+++.+. +-+-..|+- +.+..++.+....+
T Consensus 28 s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ-~l~~~~diG~~Kve~a~~~l~~iNP---------- 95 (287)
T PRK08223 28 SRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQ-AGAMMSTLGRPKAEVLAEMVRDINP---------- 95 (287)
T ss_pred CCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccc-cCcChhHCCCcHHHHHHHHHHHHCC----------
Confidence 37999996 9999999999999985 788888776555554322 112233442 33445555554422
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.-++..+...+. ++++.+.+.++|+|+.+.-.. +...-..+-++|++.+. .+|+
T Consensus 96 -------~v~V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~--------~~~~r~~ln~~c~~~~i-P~V~ 149 (287)
T PRK08223 96 -------ELEIRAFPEGIG-KENADAFLDGVDVYVDGLDFF--------EFDARRLVFAACQQRGI-PALT 149 (287)
T ss_pred -------CCEEEEEecccC-ccCHHHHHhCCCEEEECCCCC--------cHHHHHHHHHHHHHcCC-CEEE
Confidence 114455554443 455677888999998764210 12333446678888874 4554
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0011 Score=51.83 Aligned_cols=66 Identities=20% Similarity=0.258 Sum_probs=45.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC---CcEEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG---LEVCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+|. |.+|..++..|.+.| ++|.+++|+++..+.+... ++. +. .+....++.+|.+++++.
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~-----~~--~~~~~~~~~advVil~v~ 71 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVR-----AA--TDNQEAAQEADVVVLAVK 71 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCe-----ec--CChHHHHhcCCEEEEEcC
Confidence 679999995 999999999999988 7899999987654432211 121 11 123344567787776664
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0061 Score=48.90 Aligned_cols=36 Identities=31% Similarity=0.399 Sum_probs=31.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~ 38 (189)
|+|.|.|+ |.+|..++..|+..| .++.+++++++..
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~ 38 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKA 38 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhh
Confidence 47999997 999999999999988 5899999886544
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0038 Score=55.43 Aligned_cols=119 Identities=18% Similarity=0.126 Sum_probs=79.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
.+|+|.|. | +|+.++..|...|. ++++++.+.-..+++... .+...|+-. .+..++.+...+.
T Consensus 108 ~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq--~~~~~diG~~Kv~~a~~~l~~inp--------- 174 (722)
T PRK07877 108 LRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRV--PAGVFDLGVNKAVVAARRIAELDP--------- 174 (722)
T ss_pred CCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccc--cCChhhcccHHHHHHHHHHHHHCC---------
Confidence 47999998 8 99999999999984 899998886666665442 233344433 3455556655543
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHH-HHHHHHHCCccEEEEeccce
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKN-IVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~-ll~~~~~~~~~~~i~iSS~~ 154 (189)
.-++..+...+. .+++.+.+.++|+|+.|.-. . .++. +-++|.+.++ -+|+-++..
T Consensus 175 --------~i~v~~~~~~i~-~~n~~~~l~~~DlVvD~~D~----------~-~~R~~ln~~a~~~~i-P~i~~~~~~ 231 (722)
T PRK07877 175 --------YLPVEVFTDGLT-EDNVDAFLDGLDVVVEECDS----------L-DVKVLLREAARARRI-PVLMATSDR 231 (722)
T ss_pred --------CCEEEEEeccCC-HHHHHHHhcCCCEEEECCCC----------H-HHHHHHHHHHHHcCC-CEEEEcCCC
Confidence 126666666665 67888889999999998522 2 2444 4467777774 555545433
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0068 Score=50.89 Aligned_cols=108 Identities=13% Similarity=0.055 Sum_probs=65.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHc-------CC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ-------GL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||.|+|++|.+|.+++-.|+.. +. ++..++++++.+... ..|+.|-.. ..+
T Consensus 102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~--------amDL~daa~--~~~---------- 161 (444)
T PLN00112 102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGV--------AMELEDSLY--PLL---------- 161 (444)
T ss_pred EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHH--------HHHHHHhhh--hhc----------
Confidence 7999999999999999999887 43 677777776555421 112211110 000
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHH-CCccEE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKE-YNVSVV 147 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~-~~~~~~ 147 (189)
.++.+..++ -+.+.++|++|.++|....... .+.|...++.+.+.+.+ .+..-+
T Consensus 162 -------------~~v~i~~~~-------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~i 221 (444)
T PLN00112 162 -------------REVSIGIDP-------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVK 221 (444)
T ss_pred -------------CceEEecCC-------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 012112222 2556788999999887654322 13667778888888888 564444
Q ss_pred EEe
Q psy3626 148 SVC 150 (189)
Q Consensus 148 i~i 150 (189)
|++
T Consensus 222 vIV 224 (444)
T PLN00112 222 VIV 224 (444)
T ss_pred EEE
Confidence 433
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0067 Score=48.73 Aligned_cols=33 Identities=24% Similarity=0.115 Sum_probs=28.4
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDP 35 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~ 35 (189)
||.|+|++|.+|..++..|...+. ++.++++.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 689999999999999999988864 688888765
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.014 Score=43.80 Aligned_cols=120 Identities=13% Similarity=0.142 Sum_probs=71.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEe---ccccC--hhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQ---GDVLK--LADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~---~d~~~--~~~~~~~~~~~~~~~~~~~~ 75 (189)
.+|+|.|. |.+|..+++.|...|. ++++++.+.-....+.+. .++. .|+-. .+.+++.++...+
T Consensus 20 s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq--~~~~~~~~~iG~~Ka~~~~~~L~~lNp------- 89 (198)
T cd01485 20 AKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSN--FFLDAEVSNSGMNRAAASYEFLQELNP------- 89 (198)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCccc--EecccchhhcCchHHHHHHHHHHHHCC-------
Confidence 47999996 6699999999999986 588888775444433221 1222 23322 2334444444322
Q ss_pred CCCCCCCccccCceeEEeccccC-HHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLK-LADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
.-++..+...+.+ .++..+.+.+.|+|+.+.. +......+-+.|++.+. .+|+.++
T Consensus 90 ----------~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d----------~~~~~~~ln~~c~~~~i-p~i~~~~ 146 (198)
T cd01485 90 ----------NVKLSIVEEDSLSNDSNIEEYLQKFTLVIATEE----------NYERTAKVNDVCRKHHI-PFISCAT 146 (198)
T ss_pred ----------CCEEEEEecccccchhhHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence 1144444444432 4456677889999998732 23444557788888885 5555444
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0012 Score=55.07 Aligned_cols=39 Identities=28% Similarity=0.312 Sum_probs=34.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
|+|.|.| .|.+|..++..|.+.|++|++++++++....+
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l 39 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKL 39 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHh
Confidence 4799999 59999999999999999999999988766544
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0029 Score=50.76 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=27.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRD 34 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~ 34 (189)
|.+|.|.||||++|..+++.|.++. .++..+..+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~ 36 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA 36 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4589999999999999999998884 456555544
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00049 Score=56.90 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=74.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++++|+|+ |-+|.-++++|.++| .+|++..|+.++...+... +.+.....+.+...+..+|++|.++++..|--
T Consensus 179 ~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~----~~~~~~~l~el~~~l~~~DvVissTsa~~~ii 253 (414)
T COG0373 179 KKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK----LGAEAVALEELLEALAEADVVISSTSAPHPII 253 (414)
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH----hCCeeecHHHHHHhhhhCCEEEEecCCCcccc
Confidence 57999996 999999999999998 6899999998777654321 12667778889999999999999998866643
Q ss_pred CCcccc----CceeEEeccccCHHHHHHHhcCC
Q psy3626 81 LPSEYH----SKVEIIQGDVLKLADVKKAIEGK 109 (189)
Q Consensus 81 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 109 (189)
....+. .+-+.+-.|+..|.++.....+.
T Consensus 254 ~~~~ve~a~~~r~~~livDiavPRdie~~v~~l 286 (414)
T COG0373 254 TREMVERALKIRKRLLIVDIAVPRDVEPEVGEL 286 (414)
T ss_pred CHHHHHHHHhcccCeEEEEecCCCCCCccccCc
Confidence 333322 22224666666666665555443
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0033 Score=50.21 Aligned_cols=68 Identities=15% Similarity=0.150 Sum_probs=45.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+| .|.+|..+++.|++.|++|.+++|+++........++.. ..+++++.+..+..|.++.+..
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~v~ 68 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLMVP 68 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEEec
Confidence 4899999 599999999999999999999999976655432222221 1233333333333566665554
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.011 Score=45.48 Aligned_cols=119 Identities=16% Similarity=0.146 Sum_probs=69.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccCh---hHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKL---ADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~ 77 (189)
.+|+|.|+ |.+|+.++..|...|. ++++++.+.-..+.+.+. .-+...|+-.. +..++.++...+
T Consensus 28 ~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq-~l~~~~dvG~~~k~~~a~~~l~~~np--------- 96 (231)
T PRK08328 28 AKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQ-ILHWEEDLGKNPKPLSAKWKLERFNS--------- 96 (231)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccc-cccChhhcCchHHHHHHHHHHHHhCC---------
Confidence 47999995 9999999999999985 688887776555544322 11223344321 122222332211
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
.-.+..+...+ +.+++.+.+.+.|+|+.+... ...-..+-+.|++.+. .+|+.+
T Consensus 97 --------~v~v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~----------~~~r~~l~~~~~~~~i-p~i~g~ 150 (231)
T PRK08328 97 --------DIKIETFVGRL-SEENIDEVLKGVDVIVDCLDN----------FETRYLLDDYAHKKGI-PLVHGA 150 (231)
T ss_pred --------CCEEEEEeccC-CHHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHcCC-CEEEEe
Confidence 11444445554 445677788899999998532 2222334456777774 455533
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0019 Score=53.19 Aligned_cols=66 Identities=30% Similarity=0.341 Sum_probs=52.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|++|+|+|+ |.+|+.++..+.+.|++|++++.++....... --.++..|..|++.+.+..+.+|.+
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~--ad~~~~~~~~D~~~l~~~a~~~dvi 67 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV--ADEVIVADYDDVAALRELAEQCDVI 67 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh--CceEEecCCCCHHHHHHHHhcCCEE
Confidence 789999997 99999999999999999999998765543221 1235667888999999999888764
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0033 Score=50.02 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=44.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.++| .|.+|..+++.|++.|++|++..|++. .+.....+. ....+..++.+++|.++.++.
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~-------~~~~s~~~~~~~advVi~~v~ 64 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGA-------VSVETARQVTEASDIIFIMVP 64 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCC-------eecCCHHHHHhcCCEEEEeCC
Confidence 3799999 699999999999999999999988753 222211111 111233455678888877765
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00076 Score=53.48 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=34.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
|++|.|+|+ |.+|..++..|+++|++|++++++++..+.
T Consensus 1 ~~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~ 39 (288)
T PRK09260 1 IEKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLES 39 (288)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence 578999996 999999999999999999999998766543
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0023 Score=47.10 Aligned_cols=65 Identities=17% Similarity=0.180 Sum_probs=46.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.|..-|.+|++++|+......... ......+++++++.+|+++++.++
T Consensus 37 ~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~--------~~~~~~~l~ell~~aDiv~~~~pl 101 (178)
T PF02826_consen 37 KTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE--------FGVEYVSLDELLAQADIVSLHLPL 101 (178)
T ss_dssp SEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH--------TTEEESSHHHHHHH-SEEEE-SSS
T ss_pred CEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc--------ccceeeehhhhcchhhhhhhhhcc
Confidence 5899999 5999999999999889999999998754320000 011234677889999998888875
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0041 Score=48.70 Aligned_cols=107 Identities=19% Similarity=0.212 Sum_probs=63.9
Q ss_pred EEEEcCCChhhHHHHHHHHHcC----CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQG----LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|.|+|++|.+|..++..|+..+ .++.+++++++.+... ..| +.+..... .
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~--------~~d------l~~~~~~~-~----------- 54 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGV--------AMD------LQDAVEPL-A----------- 54 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHH--------HHH------HHHhhhhc-c-----------
Confidence 5799998999999999999888 6899999877554321 111 11111100 0
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
..++. -..+..+.+.++|+|+.++|........ .-|....+.+.+.+++.+.+.++.
T Consensus 55 --------~~~i~-----~~~d~~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i 116 (263)
T cd00650 55 --------DIKVS-----ITDDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWII 116 (263)
T ss_pred --------CcEEE-----ECCchHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 00111 1122346677888888888765544221 245556777777777776444443
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0038 Score=50.17 Aligned_cols=25 Identities=32% Similarity=0.426 Sum_probs=23.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG 25 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g 25 (189)
|++|.|.|+||.+|+.+++.|.++.
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~ 25 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERH 25 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcC
Confidence 6899999999999999999999864
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0017 Score=49.34 Aligned_cols=137 Identities=15% Similarity=0.036 Sum_probs=75.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEe--------ccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQ--------GDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--------~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
+-+++||++.+||..++..+..++.+...+.+.....+ . .++.... +|++....+.+..+..
T Consensus 7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~--~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~------- 76 (253)
T KOG1204|consen 7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-L--EGLKVAYGDDFVHVVGDITEEQLLGALREAP------- 76 (253)
T ss_pred eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-c--cceEEEecCCcceechHHHHHHHHHHHHhhh-------
Confidence 35899999999999999999988766554444332222 1 2333333 3333333333333221
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------------CcceehhhHHH----H
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------------PTTVMSEGMKN----I 135 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------------~~~~~~~~~~~----l 135 (189)
.+--+..|.+|+++|...+-. .+..|.-.+.. +
T Consensus 77 -----------------------------r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~ 127 (253)
T KOG1204|consen 77 -----------------------------RKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWA 127 (253)
T ss_pred -----------------------------hhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHH
Confidence 122234688888888654321 01233333333 3
Q ss_pred HHHHHHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 136 VTAMKEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 136 l~~~~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++..++.. .+.+|++||...... ++ ....|+..|.+...+.+
T Consensus 128 l~~lk~~p~~~~vVnvSS~aav~p---~~-~wa~yc~~KaAr~m~f~ 170 (253)
T KOG1204|consen 128 LPKLKKSPVNGNVVNVSSLAAVRP---FS-SWAAYCSSKAARNMYFM 170 (253)
T ss_pred HHHhcCCCccCeEEEecchhhhcc---cc-HHHHhhhhHHHHHHHHH
Confidence 33444442 368899999876542 22 23346777777666655
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0029 Score=53.25 Aligned_cols=33 Identities=27% Similarity=0.257 Sum_probs=29.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+++|+|+++ +|..+++.|+++|++|++.+++.
T Consensus 6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 5899999755 99999999999999999998864
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00044 Score=55.87 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=33.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
||+|.|+|+ |-+|..++..|.+.|++|+++.|+++..
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~ 40 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFA 40 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 579999995 9999999999999999999999986543
|
|
| >COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0043 Score=47.57 Aligned_cols=124 Identities=10% Similarity=0.037 Sum_probs=80.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|++.++| -|..|..++++|+.+||+|+++++++...+.+.... .....+.+.+...+.....+++.+++.+|
T Consensus 1 M~iGmiG-LGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~g----a~~a~sl~el~~~L~~pr~vWlMvPag~i--- 72 (300)
T COG1023 1 MQIGMIG-LGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEG----ATGAASLDELVAKLSAPRIVWLMVPAGDI--- 72 (300)
T ss_pred Ccceeec-cchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcC----CccccCHHHHHHhcCCCcEEEEEccCCCc---
Confidence 5788889 599999999999999999999999987665443222 22333444555555444555555544333
Q ss_pred CccccCceeEEeccccC--HHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecC
Q psy3626 82 PSEYHSKVEIIQGDVLK--LADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~ 158 (189)
.+ .+++...+..=|+||..- ..|..-..+-.+.+.+.++ +|+-++++.+..+
T Consensus 73 ---------------t~~vi~~la~~L~~GDivIDGG---------NS~y~Ds~rr~~~l~~kgi-~flD~GTSGG~~G 126 (300)
T COG1023 73 ---------------TDAVIDDLAPLLSAGDIVIDGG---------NSNYKDSLRRAKLLAEKGI-HFLDVGTSGGVWG 126 (300)
T ss_pred ---------------hHHHHHHHHhhcCCCCEEEECC---------ccchHHHHHHHHHHHhcCC-eEEeccCCCCchh
Confidence 22 245666677777887642 1244556666667777776 7887888766543
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0056 Score=50.32 Aligned_cols=32 Identities=34% Similarity=0.568 Sum_probs=28.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEe
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLL 32 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~ 32 (189)
||+|.|+|+||.||...++.+.+. .++|.+++
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLa 34 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALS 34 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCccccEEEEEE
Confidence 899999999999999999888664 67888886
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0014 Score=52.02 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=33.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++|.|+|+ |.+|..++..|...|++|++++++++.++
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~ 40 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALE 40 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 78999995 99999999999999999999999876543
|
|
| >KOG0172|consensus | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00067 Score=55.18 Aligned_cols=74 Identities=12% Similarity=0.116 Sum_probs=63.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCccc-CCceeEEeccccChh-HHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLA-DVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~~ 75 (189)
|++|+++| +||+.+.+++.|.++ +.+|++.+|...+.+.+. +.+++.+..|+.+++ .+.+.++..|.++.+.+.
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP~ 78 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLLPY 78 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeeccc
Confidence 56899999 599999999999987 578999999988777653 356889999999988 999999999998877764
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0034 Score=49.96 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=41.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+|.|.+|.+|+.++..|+++|++|+++.|+.. +++...+++|+++.+++
T Consensus 160 k~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 160 KHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DAKALCRQADIVVAAVG 211 (301)
T ss_pred CEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHHHHhcCCEEEEecC
Confidence 68999999899999999999999999999976543 23455566676666665
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0012 Score=52.34 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=47.5
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+|.|+| .|.+|..++..|++.|++|++++|+++..+.+...+. ....+..++++++|.++.+++
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~-------~~~~~~~~~~~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGA-------VTAETARQVTEQADVIFTMVP 64 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCC-------cccCCHHHHHhcCCEEEEecC
Confidence 588998 5999999999999999999999998766544322211 112345567788998887775
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.016 Score=45.03 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=46.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGK 66 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 66 (189)
|++|+|+|||+ =|+.+++.|.+.|+++++....+.... ....+.+..+-+.+.+.+.+.+++.
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~--~~~~~~v~~G~l~~~~~l~~~l~~~ 64 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGP--ADLPGPVRVGGFGGAEGLAAYLREE 64 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCc--ccCCceEEECCCCCHHHHHHHHHHC
Confidence 67999999865 589999999999998888776654332 2245566677766778888877643
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.002 Score=51.25 Aligned_cols=36 Identities=36% Similarity=0.492 Sum_probs=31.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
|+|+|.|+ |.+|..++..|.+.|++|+++.| ++..+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~ 36 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAK 36 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHH
Confidence 57999995 99999999999999999999999 55443
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0048 Score=49.74 Aligned_cols=36 Identities=25% Similarity=0.170 Sum_probs=30.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~ 38 (189)
+||.|+|+ |.+|..++..+...| .++.+++++++..
T Consensus 6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~ 42 (319)
T PTZ00117 6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVP 42 (319)
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccc
Confidence 58999997 999999999888888 6888888876554
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0019 Score=51.20 Aligned_cols=38 Identities=18% Similarity=0.381 Sum_probs=34.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
|++|.|+|+ |.+|..++..|+..|++|++++++++.++
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~ 42 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELAT 42 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 458999996 99999999999999999999999987664
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0008 Score=46.84 Aligned_cols=33 Identities=39% Similarity=0.557 Sum_probs=28.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEe-cCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLL-RDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~-r~~ 35 (189)
++|.|+|+ |.+|.+|++.|.+.|++|..+. |++
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~ 44 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSP 44 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCc
Confidence 58999996 9999999999999999998874 544
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0043 Score=49.36 Aligned_cols=51 Identities=16% Similarity=0.122 Sum_probs=41.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEe-cCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLL-RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++|+|.|.+|.+|+.++.+|+++|+.|+++. |++ .++...+.+|+++.+++
T Consensus 159 k~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~----------------------~l~e~~~~ADIVIsavg 210 (296)
T PRK14188 159 LNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR----------------------DLPAVCRRADILVAAVG 210 (296)
T ss_pred CEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC----------------------CHHHHHhcCCEEEEecC
Confidence 6899999999999999999999999999984 543 13455667777776666
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0054 Score=43.42 Aligned_cols=72 Identities=17% Similarity=0.270 Sum_probs=52.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++++|.|.+.-+|+.++..|.++|.+|+...++.. +++..++++|+++.+++.. ...
T Consensus 29 k~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~~~v~~ADIVvsAtg~~--~~i 85 (140)
T cd05212 29 KKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQSKVHDADVVVVGSPKP--EKV 85 (140)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHHHHHhhCCEEEEecCCC--Ccc
Confidence 68999999999999999999999999988875432 3456788999998888754 224
Q ss_pred Cccc-cCceeEEeccc
Q psy3626 82 PSEY-HSKVEIIQGDV 96 (189)
Q Consensus 82 ~~~~-~~~~~~~~~~~ 96 (189)
+.+| ++...++..+.
T Consensus 86 ~~~~ikpGa~Vidvg~ 101 (140)
T cd05212 86 PTEWIKPGATVINCSP 101 (140)
T ss_pred CHHHcCCCCEEEEcCC
Confidence 4444 33344444433
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0079 Score=41.15 Aligned_cols=34 Identities=32% Similarity=0.393 Sum_probs=26.0
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|+|.|++ +..|..+.+.|.+.|++|+.+..+.
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKG 37 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTC
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCc
Confidence 589999987 6689999999999999999886554
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.014 Score=46.92 Aligned_cols=119 Identities=17% Similarity=0.088 Sum_probs=71.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+|+|.|+ |++|..+++.|...|. ++++++.+.-..+.+.+. .-+-.-|+-. .+..++.++....
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQ-flf~~~dVGk~Kaevaa~~l~~lNp----------- 67 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQ-FLFRKKHVGKSKAQVAKEAVLSFNP----------- 67 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcC-ccCChhHcCcHHHHHHHHHHHHHCC-----------
Confidence 5899996 9999999999999986 678887775555444221 1112234432 2333444433211
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
.-++..+..++.+.....+.+.+.|+|+.+.- +...-..+-+.|+..+. .+|..+
T Consensus 68 ------~v~V~~~~~~i~~~~~~~~f~~~~DvVv~a~D----------n~~ar~~in~~c~~~~i-p~I~~g 122 (312)
T cd01489 68 ------NVKIVAYHANIKDPDFNVEFFKQFDLVFNALD----------NLAARRHVNKMCLAADV-PLIESG 122 (312)
T ss_pred ------CCeEEEEeccCCCccchHHHHhcCCEEEECCC----------CHHHHHHHHHHHHHCCC-CEEEEe
Confidence 11455555666554334567788999998752 23444556677777774 455443
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0051 Score=50.04 Aligned_cols=34 Identities=26% Similarity=0.525 Sum_probs=28.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~ 35 (189)
++|.|+|++|++|+.+++.|..+. .++..+.++.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 489999999999999999998875 6887775443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0036 Score=50.15 Aligned_cols=38 Identities=26% Similarity=0.335 Sum_probs=33.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
|++|.|+|+ |.+|..++..|++.|++|++++++++...
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~ 41 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALE 41 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 468999995 99999999999999999999998876544
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0015 Score=55.76 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=33.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
|+|.|+|+ |.+|..++..|+..|++|++++++++..+
T Consensus 5 ~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~ 41 (495)
T PRK07531 5 MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAER 41 (495)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 58999995 99999999999999999999999876553
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.027 Score=45.45 Aligned_cols=36 Identities=19% Similarity=0.184 Sum_probs=30.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
+||.|+|+ |.+|..++..++..|. ++.+++++++..
T Consensus 7 ~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~ 43 (321)
T PTZ00082 7 RKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIP 43 (321)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence 58999995 9999999999988885 888888887654
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.023 Score=44.12 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=70.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|..+++.|...|. ++++++.+.-..+.+.+.. -+-..|+-. .+.+++.+....+
T Consensus 33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~-l~~~~dvG~~Ka~~a~~~l~~lnp---------- 100 (245)
T PRK05690 33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQV-LHDDATIGQPKVESARAALARINP---------- 100 (245)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhh-cCChhhCCChHHHHHHHHHHHHCC----------
Confidence 47999997 9999999999999985 7888887754444432211 111234422 3344444444321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.-++..+...+ +.++..+.+.+.|+||.+... ...-..+-+.|.+.+. .+|+
T Consensus 101 -------~v~i~~~~~~i-~~~~~~~~~~~~DiVi~~~D~----------~~~r~~ln~~~~~~~i-p~v~ 152 (245)
T PRK05690 101 -------HIAIETINARL-DDDELAALIAGHDLVLDCTDN----------VATRNQLNRACFAAKK-PLVS 152 (245)
T ss_pred -------CCEEEEEeccC-CHHHHHHHHhcCCEEEecCCC----------HHHHHHHHHHHHHhCC-EEEE
Confidence 11344444444 345667778899999998532 2333446677777774 4554
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.002 Score=53.73 Aligned_cols=104 Identities=12% Similarity=0.034 Sum_probs=66.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++++|.|+ |..|+.++..|...|. ++++..|++++...+....- .+.....+++...+..+|.+|.++++-.|--
T Consensus 182 kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~---~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi 257 (414)
T PRK13940 182 KNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR---NASAHYLSELPQLIKKADIIIAAVNVLEYIV 257 (414)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc---CCeEecHHHHHHHhccCCEEEECcCCCCeeE
Confidence 58999995 9999999999999985 79999998766554422100 0123334677888999999999998744432
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKD 110 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 110 (189)
...... .-..+-.|+..|.++.......+
T Consensus 258 ~~~~~~-~~~~~~iDLavPRdidp~v~~l~ 286 (414)
T PRK13940 258 TCKYVG-DKPRVFIDISIPQALDPKLGELE 286 (414)
T ss_pred CHHHhC-CCCeEEEEeCCCCCCCccccCcC
Confidence 111111 11234456666666655555433
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0066 Score=48.53 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=26.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLR 33 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r 33 (189)
.||.|.|++|+.|..+++.|..+ ..++..+..
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s 34 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAP 34 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEec
Confidence 47999999999999999999998 456665543
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.01 Score=48.82 Aligned_cols=55 Identities=18% Similarity=0.095 Sum_probs=42.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++|+|.|.+|.+|+.+++.|.+. +++|+++++..+. .......++++|.|++|++
T Consensus 5 ~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~------------------~~~~~~~v~~aDlVilavP 60 (370)
T PRK08818 5 PVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG------------------SLDPATLLQRADVLIFSAP 60 (370)
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc------------------cCCHHHHhcCCCEEEEeCC
Confidence 58999999999999999999875 8899988874211 1123455778888887776
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0048 Score=50.09 Aligned_cols=66 Identities=21% Similarity=0.245 Sum_probs=52.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|++|.|+|| |.+|+-++..-.+-|+++++++-+++.+... .--.++.++-+|+++++++.+.+|.+
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~--va~~~i~~~~dD~~al~ela~~~DVi 66 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQ--VADRVIVAAYDDPEALRELAAKCDVI 66 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhh--cccceeecCCCCHHHHHHHHhhCCEE
Confidence 789999996 9999999988888899999999887766533 12235666677888888888888753
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0072 Score=48.24 Aligned_cols=38 Identities=21% Similarity=0.231 Sum_probs=33.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
|+|.|+| .|.+|..+++.|++.|++|++++|+++....
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~ 38 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDV 38 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 3799999 5999999999999999999999998765544
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.025 Score=46.97 Aligned_cols=118 Identities=13% Similarity=-0.011 Sum_probs=70.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |++|..++..|...|. ++++++.+.-..+.+.+. .-+-..|+-. .+..++.+....+
T Consensus 43 ~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq-~l~~~~diG~~Ka~~a~~~l~~~np---------- 110 (392)
T PRK07878 43 ARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQ-VIHGQSDVGRSKAQSARDSIVEINP---------- 110 (392)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccc-cccChhcCCChHHHHHHHHHHHhCC----------
Confidence 37999995 9999999999999986 678887775555544221 1112344432 3344444444321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.-++..+...+. .++..+.+.++|+||.+... ...-..+-++|.+.+. .+|+.
T Consensus 111 -------~v~i~~~~~~i~-~~~~~~~~~~~D~Vvd~~d~----------~~~r~~ln~~~~~~~~-p~v~~ 163 (392)
T PRK07878 111 -------LVNVRLHEFRLD-PSNAVELFSQYDLILDGTDN----------FATRYLVNDAAVLAGK-PYVWG 163 (392)
T ss_pred -------CcEEEEEeccCC-hhHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHcCC-CEEEE
Confidence 113444444443 34566778899999987522 2222335567777774 45553
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.025 Score=42.36 Aligned_cols=119 Identities=13% Similarity=0.024 Sum_probs=68.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |.+|.++++.|...|. ++++++.+.-..+.+.+.. -+-.-|+-. .+.+++.++...+
T Consensus 22 s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqf-l~~~~diG~~Ka~a~~~~L~~lNp---------- 89 (197)
T cd01492 22 ARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQF-LIPAEDLGQNRAEASLERLRALNP---------- 89 (197)
T ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCc-cccHHHcCchHHHHHHHHHHHHCC----------
Confidence 47999996 7799999999999996 5778777654444332211 111223322 3344444544321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
.-++......+. +...+.+.+.|+++.+.. +......+-+.|++.+. .+|+.++
T Consensus 90 -------~v~i~~~~~~~~--~~~~~~~~~~dvVi~~~~----------~~~~~~~ln~~c~~~~i-p~i~~~~ 143 (197)
T cd01492 90 -------RVKVSVDTDDIS--EKPEEFFSQFDVVVATEL----------SRAELVKINELCRKLGV-KFYATGV 143 (197)
T ss_pred -------CCEEEEEecCcc--ccHHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEEe
Confidence 113334444333 223456778999998642 23445567778888886 4555444
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0016 Score=51.79 Aligned_cols=37 Identities=35% Similarity=0.356 Sum_probs=32.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
|+|+|.|+ |.+|..++..|.+.|++|++++|+++...
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~ 37 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLD 37 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHH
Confidence 47999996 99999999999999999999999765544
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0064 Score=45.13 Aligned_cols=128 Identities=16% Similarity=0.192 Sum_probs=66.5
Q ss_pred CChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCCC--C-CCcc
Q psy3626 10 TGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDPQ--R-LPSE 84 (189)
Q Consensus 10 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 84 (189)
||..|.++++.+..+|++|+.+.... .... ..++..+...-.. .+.+.+.++.+|++|+++-.+... . ....
T Consensus 28 SG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~--p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf~p~~~~~~K 104 (185)
T PF04127_consen 28 SGKMGAALAEEAARRGAEVTLIHGPS-SLPP--PPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSDFRPEEPAEGK 104 (185)
T ss_dssp -SHHHHHHHHHHHHTT-EEEEEE-TT-S------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SEEESCHHSS-
T ss_pred cCHHHHHHHHHHHHCCCEEEEEecCc-cccc--cccceEEEecchhhhhhhhccccCcceeEEEecchhheeehhccccc
Confidence 79999999999999999999998873 2221 2456666655443 456777778888888777654322 1 1111
Q ss_pred cc-CceeEEeccccCHHHHHHHh----cCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 85 YH-SKVEIIQGDVLKLADVKKAI----EGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 85 ~~-~~~~~~~~~~~~~~~~~~~~----~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.. ..-......+....++.+.+ ..-..+|.+.... + +...+..+.+++.+..-+|.
T Consensus 105 IkK~~~~~l~l~L~~~pkIL~~l~~~~~~~~~lVGFkaEt--------~-~l~~~A~~kl~~k~~D~IVa 165 (185)
T PF04127_consen 105 IKKSSGDELTLELKPTPKILAELRKNKKPNQFLVGFKAET--------E-ELIENAKEKLERKGADLIVA 165 (185)
T ss_dssp G---TT-CEEEEEEE-GGHGCCHHHHCSTTTEEEEEEEES--------C-HHHHHHHHHHHHCT-SEEEE
T ss_pred cccccCcceEEEEEeChHHHHHHHhcccCCcEEEEEEecC--------C-cHHHHHHHHhHhhCCCEEEE
Confidence 11 11223444444444444433 2334555555442 1 34455555556677766664
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0056 Score=44.74 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=41.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|+++.+|..+++.|.++|.+|+++.|+. +.+.+.+.++|++|.+++
T Consensus 45 k~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat~ 96 (168)
T cd01080 45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAVG 96 (168)
T ss_pred CEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcCC
Confidence 6899999855679999999999999999888863 245566777777776665
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0039 Score=50.29 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=32.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++|.|.|+ |-+|..++..|+..|++|++++++++..
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~ 43 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAE 43 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 68999995 9999999999999999999999987544
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0044 Score=51.95 Aligned_cols=40 Identities=28% Similarity=0.195 Sum_probs=34.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY 42 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~ 42 (189)
+|+|.|.| .|++|..++..|.+ +++|+++++++++.+.+.
T Consensus 6 ~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~ 45 (425)
T PRK15182 6 EVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK 45 (425)
T ss_pred CCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH
Confidence 36899998 79999999999766 699999999988776654
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.013 Score=40.24 Aligned_cols=31 Identities=39% Similarity=0.492 Sum_probs=26.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHc-CCcEEEEec
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ-GLEVCTLLR 33 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r 33 (189)
|+.|+|++|.+|..++..|.+. ++++..+..
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~ 32 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAA 32 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEe
Confidence 5899999999999999999985 888877733
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.02 Score=46.23 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=71.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|++.|.| .|.||+.++++|..-|.+|+++++..+..... .-.....+++++.++.+|++.++++..+=
T Consensus 143 kTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~--------~~~~~~~~~Ld~lL~~sDiv~lh~PlT~e--- 210 (324)
T COG0111 143 KTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAG--------VDGVVGVDSLDELLAEADILTLHLPLTPE--- 210 (324)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhc--------cccceecccHHHHHhhCCEEEEcCCCCcc---
Confidence 6899999 59999999999999999999999943322110 00112346789999999998877764221
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
.-.+.+.+.+...-.++ ++||++-.. +.-...|+++++...+
T Consensus 211 -----------T~g~i~~~~~a~MK~ga-ilIN~aRG~---------vVde~aL~~AL~~G~i 252 (324)
T COG0111 211 -----------TRGLINAEELAKMKPGA-ILINAARGG---------VVDEDALLAALDSGKI 252 (324)
T ss_pred -----------hhcccCHHHHhhCCCCe-EEEECCCcc---------eecHHHHHHHHHcCCc
Confidence 11233444444443444 777776443 2225677777777654
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0032 Score=49.74 Aligned_cols=66 Identities=17% Similarity=0.153 Sum_probs=44.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|.| .|.+|..++..|.+.|++|++++|+++........+. +. ...+ .. ..++++|.++.+++
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~--~~-~~~~--~~-~~~~~aDlVilavp 66 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL--VD-EAST--DL-SLLKDCDLVILALP 66 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC--cc-cccC--CH-hHhcCCCEEEEcCC
Confidence 4799999 6999999999999999999999998765443221111 00 0111 11 24577888777764
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0041 Score=52.99 Aligned_cols=119 Identities=11% Similarity=0.101 Sum_probs=72.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC----ceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS----KVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|++|.++| .|-.|+.++++|+++|++|.+..|++++.+.+... +...+ .-..++.++.+.++.+|.|+.++...
T Consensus 6 ~~~IG~IG-LG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~-~~a~s~~e~v~~l~~~dvIi~~v~~~ 83 (493)
T PLN02350 6 LSRIGLAG-LAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPL-YGFKDPEDFVLSIQKPRSVIILVKAG 83 (493)
T ss_pred CCCEEEEe-eHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCccc-ccCCCHHHHHhcCCCCCEEEEECCCc
Confidence 46899999 69999999999999999999999998776543211 11100 01234555555555688877776532
Q ss_pred CCCCCCccccCceeEEeccccCH-HHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEE
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKL-ADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVS 148 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i 148 (189)
.+ + .+. +.+...+..=|++|.+- ++...-++.+.+.+++.|+ +++
T Consensus 84 ~a----------V-------~~Vi~gl~~~l~~G~iiID~s---------T~~~~~t~~~~~~l~~~Gi-~fl 129 (493)
T PLN02350 84 AP----------V-------DQTIKALSEYMEPGDCIIDGG---------NEWYENTERRIKEAAEKGL-LYL 129 (493)
T ss_pred HH----------H-------HHHHHHHHhhcCCCCEEEECC---------CCCHHHHHHHHHHHHHcCC-eEE
Confidence 11 0 000 12223333345555542 2245567788888888775 444
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.001 Score=47.55 Aligned_cols=70 Identities=20% Similarity=0.137 Sum_probs=47.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |.+|+.+++.|.+.| ++|++++|+++........ .......+..+. .+.++++|.++.+++.
T Consensus 20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~ 91 (155)
T cd01065 20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPV 91 (155)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCC
Confidence 57999996 999999999999985 7899999987655432111 111111233332 3347889999888864
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.021 Score=50.60 Aligned_cols=119 Identities=17% Similarity=0.118 Sum_probs=74.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |++|+.++..|...|. ++++++.+.-..+++... +-+-..|+- +.+.+++.+...++
T Consensus 44 ~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ-~~~~~~dvG~~Kv~v~~~~l~~inP---------- 111 (679)
T PRK14851 44 AKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQ-FGARVPSFGRPKLAVMKEQALSINP---------- 111 (679)
T ss_pred CeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccC-cCcChhhCCCHHHHHHHHHHHHhCC----------
Confidence 47999995 9999999999999986 677777664444443221 112233443 23444555544432
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.-++..+...+. .+++.+.+.++|+||.+.-.. ....-..+.+.|.+.++. +|+
T Consensus 112 -------~~~I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~--------~~~~r~~l~~~c~~~~iP-~i~ 165 (679)
T PRK14851 112 -------FLEITPFPAGIN-ADNMDAFLDGVDVVLDGLDFF--------QFEIRRTLFNMAREKGIP-VIT 165 (679)
T ss_pred -------CCeEEEEecCCC-hHHHHHHHhCCCEEEECCCCC--------cHHHHHHHHHHHHHCCCC-EEE
Confidence 225666666664 567778899999999875221 123334577788888754 444
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0025 Score=47.80 Aligned_cols=29 Identities=24% Similarity=0.201 Sum_probs=26.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEE
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCT 30 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~ 30 (189)
|++.|.||+|.+|+.+++.|.+.|+.|.+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~~ 29 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVYI 29 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEEE
Confidence 58999999999999999999999998863
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.031 Score=45.76 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=71.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |++|..++..|...|. ++++++.+.-..+.+.+. .-+-..|+-. .+.+++.++...+-
T Consensus 29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq-~l~~~~diG~~Ka~~a~~~l~~~np~--------- 97 (355)
T PRK05597 29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQ-VIHSTAGVGQPKAESAREAMLALNPD--------- 97 (355)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccC-cccChhHCCChHHHHHHHHHHHHCCC---------
Confidence 47999996 9999999999999986 788888876555544222 1111234433 34445555443221
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
-++..+...+ +.++..+.+.+.|+|+.+... ...-..+-++|.+.+. .+|+.
T Consensus 98 --------v~v~~~~~~i-~~~~~~~~~~~~DvVvd~~d~----------~~~r~~~n~~c~~~~i-p~v~~ 149 (355)
T PRK05597 98 --------VKVTVSVRRL-TWSNALDELRDADVILDGSDN----------FDTRHLASWAAARLGI-PHVWA 149 (355)
T ss_pred --------cEEEEEEeec-CHHHHHHHHhCCCEEEECCCC----------HHHHHHHHHHHHHcCC-CEEEE
Confidence 1344444444 345666778899999998632 2222335567777774 45543
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.021 Score=52.21 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=75.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |++|..++..|...|. ++++++.+.-..+++..+ +-+-..|+- +.+..++.+...++-
T Consensus 333 srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ-~l~~~~dIG~~Kaevaa~~l~~INP~--------- 401 (989)
T PRK14852 333 SRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQ-YGASIASFGRGKLDVMTERALSVNPF--------- 401 (989)
T ss_pred CcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccc-cCCChhhCCChHHHHHHHHHHHHCCC---------
Confidence 47999995 9999999999999986 677777765444444222 112223332 334555555554331
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
-++..+...+ +.+++.+.+.++|+||.+.-.. ....-+.+...|.+.++ .+|+
T Consensus 402 --------v~I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~--------~~~~rr~l~~~c~~~~I-P~I~ 454 (989)
T PRK14852 402 --------LDIRSFPEGV-AAETIDAFLKDVDLLVDGIDFF--------ALDIRRRLFNRALELGI-PVIT 454 (989)
T ss_pred --------CeEEEEecCC-CHHHHHHHhhCCCEEEECCCCc--------cHHHHHHHHHHHHHcCC-CEEE
Confidence 1555665555 5567788899999999875321 23344667778888875 4554
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.014 Score=46.73 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=29.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~ 36 (189)
|||.|.|+ |.+|..++..|+..|+ +|+++++.++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~ 36 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEG 36 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCC
Confidence 68999996 9999999999999876 8999888543
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.026 Score=44.95 Aligned_cols=95 Identities=13% Similarity=0.085 Sum_probs=57.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecc--c--cChhHHHHhhhcCcceeeecccCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGD--V--LKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d--~--~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+|.|+ |.+|..+++.|...|. ++++++.+.-..+.+.+..+ +-.-| + .+.+..++.++...+-+
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L-~~~~D~~iGk~Ka~aaa~~L~~iNP~v------- 71 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSL-FTFEDCKGGKPKAEAAAERLKEIFPSI------- 71 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccc-cccchhhcCccHHHHHHHHHHHHCCCc-------
Confidence 6899996 9999999999999986 67777766544444322211 11122 2 23344555554432111
Q ss_pred CCCCCccccCceeEEecc----------------ccCHHHHHHHhcCCCEEEEee
Q psy3626 78 PQRLPSEYHSKVEIIQGD----------------VLKLADVKKAIEGKDGVVVAL 116 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~d~vv~~~ 116 (189)
++..+... ..+.+.+.+.+++.|+|+.+.
T Consensus 72 ----------~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~t 116 (307)
T cd01486 72 ----------DATGIVLSIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLT 116 (307)
T ss_pred ----------EEEEeeeeccccccccccccccccccCHHHHHHHHhhCCEEEECC
Confidence 12112111 135677889999999999986
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.00079 Score=53.18 Aligned_cols=71 Identities=18% Similarity=0.192 Sum_probs=48.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |.+|+.++..|...| .+|+++.|++++...+...--......+ + .+....+.++|.+|.+++.
T Consensus 124 k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~-~~~~~~~~~~DivInaTp~ 195 (278)
T PRK00258 124 KRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D-LELQEELADFDLIINATSA 195 (278)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c-ccchhccccCCEEEECCcC
Confidence 57999996 999999999999999 7899999997665443211000000111 0 1234556788999988876
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0058 Score=47.95 Aligned_cols=67 Identities=19% Similarity=0.188 Sum_probs=40.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEE-EEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVC-TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||++.|.| .|.+|+.+++.+.+. +.++. +++|++++....... .+....+++++.++++|.++.|++
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~------~~~~~~~~~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK------TGAKACLSIDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh------cCCeeECCHHHHhcCCCEEEEcCC
Confidence 78999999 599999999999876 45544 455555433322111 011111234444567888776654
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.003 Score=50.13 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=33.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++|.|+|+ |.+|..++..|+..|++|++++++++..+
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~ 40 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILK 40 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 68999995 99999999999999999999999876554
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0025 Score=52.47 Aligned_cols=72 Identities=21% Similarity=0.165 Sum_probs=53.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
.+++|+|+ |-+|...++.|...|.+|++++|++++.+.+.......+..+..+++.+.+.++++|.+|.++.
T Consensus 168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~ 239 (370)
T TIGR00518 168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVL 239 (370)
T ss_pred ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccc
Confidence 36899996 9999999999999999999999987654432111111233445667788899999999987763
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.047 Score=44.65 Aligned_cols=36 Identities=28% Similarity=0.546 Sum_probs=29.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~ 38 (189)
+||.|+|+ |.+|..++..|+..+. ++.+++..++.+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~ 75 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKL 75 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchh
Confidence 58999996 9999999999988764 688888866443
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.033 Score=46.10 Aligned_cols=23 Identities=26% Similarity=0.231 Sum_probs=21.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG 25 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g 25 (189)
||.|+|++|.+|..++-.|...+
T Consensus 46 KV~IIGAaG~VG~~~A~~l~~~~ 68 (387)
T TIGR01757 46 NVAVSGAAGMISNHLLFMLASGE 68 (387)
T ss_pred EEEEECCCcHHHHHHHHHHHhcc
Confidence 79999999999999999998875
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.028 Score=45.92 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=49.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc----CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.|..-|.+|++++|+........ ...+.-+........+++++++.+|+++++++.
T Consensus 160 ktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lPl 236 (347)
T PLN02928 160 KTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCTL 236 (347)
T ss_pred CEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCCC
Confidence 6899999 599999999999988999999988743211100 000000000111456788999999999888875
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.013 Score=48.46 Aligned_cols=37 Identities=19% Similarity=0.002 Sum_probs=33.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
+|+|+|||++..+|..+++.|.+.|++|++++..+..
T Consensus 4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 4799999999999999999999999999999887543
|
|
| >PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0043 Score=50.50 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=44.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC--ceeEE------eccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS--KVEII------QGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~--~~~~~------~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
||+|.|.|+ |..|..++..|.+.| .++.+.|+++..+..... +.... ..++.-..+...+++++|.++++
T Consensus 7 ~mkI~IiGa-Ga~G~alA~~La~~g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVila 84 (341)
T PRK12439 7 EPKVVVLGG-GSWGTTVASICARRG-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVVMG 84 (341)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCC-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEEEE
Confidence 679999995 999999999999998 677777876543221110 11111 11121223444567788877766
Q ss_pred cc
Q psy3626 73 TL 74 (189)
Q Consensus 73 ~~ 74 (189)
+.
T Consensus 85 vp 86 (341)
T PRK12439 85 VP 86 (341)
T ss_pred eC
Confidence 64
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.034 Score=43.65 Aligned_cols=33 Identities=33% Similarity=0.487 Sum_probs=28.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLR 33 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r 33 (189)
|++|.|.|++|.+|+.+++.+.+. +.++.++..
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 789999999999999999999875 888877654
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.045 Score=43.99 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=46.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++++..-|.+|.+++|...... ... ...+++++++.+|+|++++++
T Consensus 146 ktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~~----~~~--------~~~~l~ell~~sDvv~lh~Pl 206 (311)
T PRK08410 146 KKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNKN----EEY--------ERVSLEELLKTSDIISIHAPL 206 (311)
T ss_pred CEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCccccc----cCc--------eeecHHHHhhcCCEEEEeCCC
Confidence 5899999 699999999999777999999988642211 111 234688999999998887775
|
|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.053 Score=44.78 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=47.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
+++.|.| .|.||+.+++.|..-|++|.+.++..... . +.....+++.+++++|++.++++...
T Consensus 117 ktvGIIG-~G~IG~~vA~~l~a~G~~V~~~dp~~~~~-----~-------~~~~~~~L~ell~~sDiI~lh~PLt~ 179 (378)
T PRK15438 117 RTVGIVG-VGNVGRRLQARLEALGIKTLLCDPPRADR-----G-------DEGDFRSLDELVQEADILTFHTPLFK 179 (378)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCccccc-----c-------cccccCCHHHHHhhCCEEEEeCCCCC
Confidence 5899999 59999999999998899999997542211 0 01123468889999999888777643
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0084 Score=47.51 Aligned_cols=52 Identities=12% Similarity=0.083 Sum_probs=40.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|.+|.+|+.++..|+++|.+|+++.|+. ..+...++++|++|.+++
T Consensus 160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---------------------~~L~~~~~~aDIvI~AtG 211 (283)
T PRK14192 160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---------------------QNLPELVKQADIIVGAVG 211 (283)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---------------------hhHHHHhccCCEEEEccC
Confidence 5899999988899999999999999888887632 123444567777776664
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.033 Score=43.01 Aligned_cols=64 Identities=9% Similarity=0.025 Sum_probs=39.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGK 66 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 66 (189)
|++|+|+|||+. ++.+++.|...+..+++.+-...... +.........+-....+.+.+.++.-
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~-l~~~~~~~~~~G~l~~e~l~~~l~e~ 65 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGAK-LAEQIGPVRVGGFLGAEGLAAFLREE 65 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCccEEEEEccccccc-chhccCCeeecCcCCHHHHHHHHHHc
Confidence 678999999765 78999999988744444333222111 11122225566666777777777653
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.047 Score=42.01 Aligned_cols=120 Identities=16% Similarity=0.213 Sum_probs=75.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccCh--hHHHHhhhcCcceeeecccCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKL--ADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+|+|.|. |++|++.++.|.+.|. ++++++-+.-...++. -++.....|+-.+ +..++-+...
T Consensus 32 ~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~N-RQi~A~~~~iGk~Kv~vm~eri~~I------------- 96 (263)
T COG1179 32 HVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTN-RQIHALLGDIGKPKVEVMKERIKQI------------- 96 (263)
T ss_pred cEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccc-hhhHhhhhhcccHHHHHHHHHHHhh-------------
Confidence 7999996 9999999999999985 7888876654443321 2233333444433 3344444443
Q ss_pred CCCccccCceeEEec-cccCHHHHHHHhcC-CCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 80 RLPSEYHSKVEIIQG-DVLKLADVKKAIEG-KDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
.+++++... ++..++.+.+.+.+ .|+||.+.-. +..=-.++..|+..+. .|| ||+++.
T Consensus 97 ------nP~c~V~~~~~f~t~en~~~~~~~~~DyvIDaiD~----------v~~Kv~Li~~c~~~ki-~vI--ss~Gag 156 (263)
T COG1179 97 ------NPECEVTAINDFITEENLEDLLSKGFDYVIDAIDS----------VRAKVALIAYCRRNKI-PVI--SSMGAG 156 (263)
T ss_pred ------CCCceEeehHhhhCHhHHHHHhcCCCCEEEEchhh----------hHHHHHHHHHHHHcCC-CEE--eecccc
Confidence 225544444 55677777777765 8999987522 3333457888888875 444 555443
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.02 Score=47.40 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=48.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+|.|.| .|.||+.++++|..-|.+|.+++|+.......... ++.-..+++++++.+|+|+++++.
T Consensus 193 ktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~-------g~~~~~~l~ell~~aDvV~l~lPl 258 (385)
T PRK07574 193 MTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQEL-------GLTYHVSFDSLVSVCDVVTIHCPL 258 (385)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhc-------CceecCCHHHHhhcCCEEEEcCCC
Confidence 5899999 59999999999999999999999875322111111 122234578889999988877764
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.045 Score=45.19 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=68.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++|+|.|+ |.+|+.++..|...|. ++++++++.-..+.+.+. .-+...|+- ..+.+++.+.....-
T Consensus 136 ~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq-~l~~~~diG~~Ka~~~~~~l~~~np~--------- 204 (376)
T PRK08762 136 ARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQ-ILHTEDRVGQPKVDSAAQRLAALNPD--------- 204 (376)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccc-cccchhhCCCcHHHHHHHHHHHHCCC---------
Confidence 47999985 9999999999999986 788888875444443221 111223332 234444444433110
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
-++..+...+ +.+.+.+.+.+.|+||.+... ...-..+-+.|.+.++ .+|+.
T Consensus 205 --------v~v~~~~~~~-~~~~~~~~~~~~D~Vv~~~d~----------~~~r~~ln~~~~~~~i-p~i~~ 256 (376)
T PRK08762 205 --------VQVEAVQERV-TSDNVEALLQDVDVVVDGADN----------FPTRYLLNDACVKLGK-PLVYG 256 (376)
T ss_pred --------CEEEEEeccC-ChHHHHHHHhCCCEEEECCCC----------HHHHHHHHHHHHHcCC-CEEEE
Confidence 0223333333 335666778899999998533 2222345667788774 45554
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0053 Score=58.39 Aligned_cols=66 Identities=18% Similarity=0.147 Sum_probs=49.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|++|.++| .|.+|..+++.|+..|++|++++|+++....+...+... .++...+++++|.++.++.
T Consensus 324 ~~~IGfIG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~-------~~s~~e~~~~aDvVi~~V~ 389 (1378)
T PLN02858 324 VKRIGFIG-LGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLA-------GNSPAEVAKDVDVLVIMVA 389 (1378)
T ss_pred CCeEEEEC-chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee-------cCCHHHHHhcCCEEEEecC
Confidence 47899998 699999999999999999999999876655432222211 2234566778888887775
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0038 Score=49.36 Aligned_cols=69 Identities=23% Similarity=0.224 Sum_probs=46.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccCh---hHHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKL---ADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~~~ 75 (189)
|++|+|.| .|.+|+.+++.|..+|+.+.++.++.+...... ....++.+. +........+|.++++++-
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~-----a~~lgv~d~~~~~~~~~~~~~aD~VivavPi 74 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKA-----ALELGVIDELTVAGLAEAAAEADLVIVAVPI 74 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHH-----HhhcCcccccccchhhhhcccCCEEEEeccH
Confidence 46778888 799999999999999999988888765432110 112233332 2225566677888877764
|
|
| >KOG4777|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=45.08 Aligned_cols=113 Identities=19% Similarity=0.160 Sum_probs=63.6
Q ss_pred ceEE-EEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIA-IFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~-ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+++. |+|+||-+|..++..|..+- +++-++.-+..+.-+....-..|-+.|+..++.-+-.++.++
T Consensus 4 kk~a~vlGaTGaVGQrFi~lLsdhP~f~ikvLgAS~RSAGK~ya~a~~wkqt~~lp~~~~e~~V~ec~------------ 71 (361)
T KOG4777|consen 4 KKSAPVLGATGAVGQRFISLLSDHPYFSIKVLGASKRSAGKRYAFAGNWKQTDLLPESAHEYTVEECT------------ 71 (361)
T ss_pred ccccceeeccchhHHHHHHHhccCCcceeeeecccccccCCceEecccchhcccccchhhhhhHhhcC------------
Confidence 3455 99999999999999998884 355555433322222111223355555554443333333332
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEP 159 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~ 159 (189)
.+.+..+|++++.++... ...+-+.+.++| ++.+|-+..|.-.
T Consensus 72 -----------------------~~~F~ecDIvfsgldad~-----------ageiek~f~eag---~iiVsNaknyRre 114 (361)
T KOG4777|consen 72 -----------------------ADSFNECDIVFSGLDADI-----------AGEIEKLFAEAG---TIIVSNAKNYRRE 114 (361)
T ss_pred -----------------------hhhcccccEEEecCCchh-----------hhhhhHHHHhcC---eEEEeCchhcccC
Confidence 244667888888765533 334555566665 3445666655544
Q ss_pred CCCC
Q psy3626 160 SKVP 163 (189)
Q Consensus 160 ~~~p 163 (189)
+..|
T Consensus 115 ~~VP 118 (361)
T KOG4777|consen 115 DGVP 118 (361)
T ss_pred CCCc
Confidence 4443
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0095 Score=47.37 Aligned_cols=38 Identities=34% Similarity=0.520 Sum_probs=33.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
|++|.|+|+ |.+|..++..|+..|++|++++++++..+
T Consensus 4 ~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 41 (295)
T PLN02545 4 IKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALS 41 (295)
T ss_pred cCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 368999996 99999999999999999999999876543
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.011 Score=42.84 Aligned_cols=64 Identities=20% Similarity=0.210 Sum_probs=38.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++|+| -|.+|+.+++.|...|.+|++..++|-..-+..-.+. +-..++++++.+|.++.+++
T Consensus 24 k~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf--------~v~~~~~a~~~adi~vtaTG 87 (162)
T PF00670_consen 24 KRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGF--------EVMTLEEALRDADIFVTATG 87 (162)
T ss_dssp SEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT---------EEE-HHHHTTT-SEEEE-SS
T ss_pred CEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCc--------EecCHHHHHhhCCEEEECCC
Confidence 5789999 7999999999999999999999987633221100111 11235566777777666655
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.04 Score=45.42 Aligned_cols=117 Identities=12% Similarity=0.133 Sum_probs=70.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|..++..|...|. ++++++.+.-..+.+.+. .-+-..|+- +.+.+++.+.....
T Consensus 42 ~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ-~l~~~~diG~~Ka~~~~~~l~~~np---------- 109 (370)
T PRK05600 42 ARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQ-ILFGASDVGRPKVEVAAERLKEIQP---------- 109 (370)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEcccccccc-ccCChhHCCCHHHHHHHHHHHHHCC----------
Confidence 37999996 9999999999999985 888888875555444221 111223432 23444444544321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.-++..+...+ +.+...+.+.++|+|+.+.-. ...-..+-+.|.+.+. .+|+
T Consensus 110 -------~v~i~~~~~~i-~~~~~~~~~~~~DlVid~~Dn----------~~~r~~in~~~~~~~i-P~v~ 161 (370)
T PRK05600 110 -------DIRVNALRERL-TAENAVELLNGVDLVLDGSDS----------FATKFLVADAAEITGT-PLVW 161 (370)
T ss_pred -------CCeeEEeeeec-CHHHHHHHHhCCCEEEECCCC----------HHHHHHHHHHHHHcCC-CEEE
Confidence 11344444444 345677788999999987532 2222334566777774 3444
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.014 Score=47.38 Aligned_cols=33 Identities=33% Similarity=0.407 Sum_probs=26.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC---CcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG---LEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~r~ 34 (189)
++|.|.||||++|..+++.|.++. .++..+...
T Consensus 5 ~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 5 WNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 589999999999999999999854 355555433
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.056 Score=43.47 Aligned_cols=36 Identities=25% Similarity=0.458 Sum_probs=29.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~ 38 (189)
+||.|+|+ |.+|..++..|...+. ++.+++++++.+
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~ 41 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKL 41 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHH
Confidence 58999996 9999999999988753 678888766433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.012 Score=42.53 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=26.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
|+++|.|.++.+|+.++..|.++|..|+....+
T Consensus 37 k~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~ 69 (160)
T PF02882_consen 37 KKVVVVGRSNIVGKPLAMLLLNKGATVTICHSK 69 (160)
T ss_dssp -EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TT
T ss_pred CEEEEECCcCCCChHHHHHHHhCCCeEEeccCC
Confidence 789999999999999999999999999887654
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.049 Score=42.00 Aligned_cols=119 Identities=17% Similarity=0.081 Sum_probs=68.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccCh--hHHHHhhhcCcceeeecccCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKL--ADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+|+|.|+ |.+|..+++.|...|. ++++++.+.-..+.+.++ .-+-..|+-.+ +..++.++...+
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQ-flf~~~dvGk~Ka~va~~~l~~~np----------- 67 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQ-FLFRPKDIGRPKSEVAAEAVNDRNP----------- 67 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccc-cCCChhhCChHHHHHHHHHHHHHCC-----------
Confidence 5899995 9999999999999986 688888775444443221 11122344332 233333333211
Q ss_pred CCCccccCceeEEeccccCHHH-HHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLAD-VKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
.-++..+...+.+... ....+++.|+|+.+.. |...-+.+-+.|.+.+. .+|..+
T Consensus 68 ------~v~i~~~~~~i~~~~~~~~~f~~~~DvVi~a~D----------n~~aR~~ln~~c~~~~i-plI~~g 123 (234)
T cd01484 68 ------NCKVVPYQNKVGPEQDFNDTFFEQFHIIVNALD----------NIIARRYVNGMLIFLIV-PLIESG 123 (234)
T ss_pred ------CCEEEEEeccCChhhhchHHHHhCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEc
Confidence 1144555555543322 2456788999998742 23444446667777764 455433
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=46.43 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=42.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|.++.+|+.++..|..+|.+|+++.++. ..+...++++|++|.+++
T Consensus 159 k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsAvg 210 (286)
T PRK14175 159 KNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSAVG 210 (286)
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEECCC
Confidence 6899999988899999999999999999887642 134566777777776665
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0083 Score=47.57 Aligned_cols=60 Identities=22% Similarity=0.158 Sum_probs=43.9
Q ss_pred EcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 7 FGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 7 tGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+| .|.+|..+++.|++.|++|++++|++++...+...+.. -.++...+++++|.++.++.
T Consensus 2 IG-lG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-------~~~s~~~~~~~advVil~vp 61 (288)
T TIGR01692 2 IG-LGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQ-------AAASPAEAAEGADRVITMLP 61 (288)
T ss_pred Cc-ccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCe-------ecCCHHHHHhcCCEEEEeCC
Confidence 45 69999999999999999999999987765543222221 12234567788898887776
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.068 Score=44.19 Aligned_cols=62 Identities=16% Similarity=0.169 Sum_probs=46.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
+++.|.| .|.+|+.+++.|..-|++|.+.++...... .. ....+++.+++++|++.++++..
T Consensus 117 ktvGIIG-~G~IG~~va~~l~a~G~~V~~~Dp~~~~~~----~~--------~~~~~l~ell~~aDiV~lh~Plt 178 (381)
T PRK00257 117 RTYGVVG-AGHVGGRLVRVLRGLGWKVLVCDPPRQEAE----GD--------GDFVSLERILEECDVISLHTPLT 178 (381)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCcccccc----cC--------ccccCHHHHHhhCCEEEEeCcCC
Confidence 5899999 599999999999999999999976432111 10 12235788899999988888764
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=48.57 Aligned_cols=69 Identities=22% Similarity=0.224 Sum_probs=46.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++|.|.| .|.+|..++..|.+.|+++.+++++++............. | ....+++.+++++|.|+++++
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~--~-~~~~~~~~~~~~aDlVilavP 69 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVI--D-ELAADLQRAAAEADLIVLAVP 69 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCC--c-ccccCHHHHhcCCCEEEEeCC
Confidence 4789998 5999999999999999999999988764332111111000 1 011345566788888887775
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0051 Score=49.09 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=48.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|. |.+|+.++..|...|.+|++++|+++........+.++ ...+.+.+.++++|.+|.+++
T Consensus 153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~-----~~~~~l~~~l~~aDiVI~t~p 219 (296)
T PRK08306 153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSP-----FHLSELAEEVGKIDIIFNTIP 219 (296)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCee-----ecHHHHHHHhCCCCEEEECCC
Confidence 58999995 99999999999999999999999865433221122222 223466778889999987653
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.012 Score=47.36 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=49.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.|..-|++|.+++|+++... ....+ ...++++++++++|+++++.+.
T Consensus 137 ~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~lPl 200 (312)
T PRK15469 137 FTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINLLPN 200 (312)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEECCCC
Confidence 5899999 699999999999988999999998654322 11111 1356788999999998877764
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.061 Score=43.35 Aligned_cols=59 Identities=17% Similarity=0.166 Sum_probs=45.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.|..-|.+|++++|.... .. ....+++++++.+|++++++++
T Consensus 149 ktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~------~~--------~~~~~l~ell~~sDiv~l~lPl 207 (317)
T PRK06487 149 KTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRP------AR--------PDRLPLDELLPQVDALTLHCPL 207 (317)
T ss_pred CEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCc------cc--------ccccCHHHHHHhCCEEEECCCC
Confidence 5899999 6999999999998779999999875321 00 0123688899999998888775
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.024 Score=47.50 Aligned_cols=71 Identities=20% Similarity=0.266 Sum_probs=50.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++++|+|+ |.+|..+++.|...|. +|++..|+++....+... +..+..+.+++.+.+.++|.+|.+++...
T Consensus 183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~----~g~~~~~~~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE----FGGEAIPLDELPEALAEADIVISSTGAPH 254 (423)
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH----cCCcEeeHHHHHHHhccCCEEEECCCCCC
Confidence 57999995 9999999999998897 799999987655433211 01123334566777888999988876533
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.046 Score=44.84 Aligned_cols=26 Identities=19% Similarity=0.459 Sum_probs=22.5
Q ss_pred ceEEEEcCCChhhHHHHHHHH-HcCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAAL-KQGLE 27 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~-~~g~~ 27 (189)
|+|.|.|+||.+|+.+++.|. ++.+.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp 27 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFD 27 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCc
Confidence 579999999999999999999 55554
|
|
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0079 Score=47.50 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=30.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC----CcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG----LEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g----~~v~~~~r~~ 35 (189)
|++|.|+| .|-+|+.++..|.+.| ++|.++.|++
T Consensus 1 m~~I~iIG-~G~mG~ala~~L~~~g~~~~~~V~~~~r~~ 38 (277)
T PRK06928 1 MEKIGFIG-YGSMADMIATKLLETEVATPEEIILYSSSK 38 (277)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCCcccEEEEeCCc
Confidence 88999999 5999999999999987 7899888864
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.024 Score=42.80 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=30.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
++++|.|| |.+|..-++.|++.|.+|++++....
T Consensus 10 k~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 10 RAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 58999996 99999999999999999999986543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0016 Score=42.71 Aligned_cols=65 Identities=25% Similarity=0.302 Sum_probs=44.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC---CcEEEE-ecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG---LEVCTL-LRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g---~~v~~~-~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||.|+| +|.+|.++++.|++.| ++|... .|++++..++.. ..+.+.. .+..++++.+|.+++++.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~advvilav~ 70 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQEADVVILAVK 70 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHHHTSEEEE-S-
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc------CChHHhhccCCEEEEEEC
Confidence 688897 6999999999999999 899855 888876654321 1111111 134556678888887775
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=37.29 Aligned_cols=35 Identities=29% Similarity=0.463 Sum_probs=31.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
+++|.|| |++|-.++..|...|.+|+++.|.+.-.
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence 6889996 9999999999999999999999987654
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.056 Score=44.89 Aligned_cols=116 Identities=15% Similarity=0.018 Sum_probs=70.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEecccc--ChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVL--KLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|. |.+|..++..|...|. ++++++.+.-..+.+.+. .-+-..|+- +.+..++.++...+
T Consensus 39 ~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ-~l~~~~dvG~~Ka~~a~~~l~~~np---------- 106 (390)
T PRK07411 39 ASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQ-VIHGTSWVGKPKIESAKNRILEINP---------- 106 (390)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcC-cccChHHCCCcHHHHHHHHHHHHCC----------
Confidence 47999995 9999999999999986 678887775555544222 111233443 23445555544322
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHH-HHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKN-IVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~-ll~~~~~~~~~~~i~ 149 (189)
.-++..+...+. .+...+.+.+.|+|+.+... .. ++. +-++|.+.+. .+|+
T Consensus 107 -------~v~v~~~~~~~~-~~~~~~~~~~~D~Vvd~~d~----------~~-~r~~ln~~~~~~~~-p~v~ 158 (390)
T PRK07411 107 -------YCQVDLYETRLS-SENALDILAPYDVVVDGTDN----------FP-TRYLVNDACVLLNK-PNVY 158 (390)
T ss_pred -------CCeEEEEecccC-HHhHHHHHhCCCEEEECCCC----------HH-HHHHHHHHHHHcCC-CEEE
Confidence 114555554443 34566778899999998633 22 333 4466777763 4443
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.04 Score=45.74 Aligned_cols=65 Identities=17% Similarity=0.165 Sum_probs=46.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhh-hcCccee
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGLE 70 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~ 70 (189)
+++|.| .|.+|+.+++.|.++|.+++++..++. +.....+..++.+|.++++.++++- ++++.++
T Consensus 242 HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI 307 (393)
T PRK10537 242 HFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL--EHRLPDDADLIPGDSSDSAVLKKAGAARARAIL 307 (393)
T ss_pred eEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh--hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEE
Confidence 578888 599999999999999999988886522 2223345678888998887776543 4444433
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.04 Score=44.94 Aligned_cols=32 Identities=31% Similarity=0.361 Sum_probs=25.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHH-cCCc---EEEEec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK-QGLE---VCTLLR 33 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~-~g~~---v~~~~r 33 (189)
++|.|.||||++|+.+++.|.. ...+ +..+..
T Consensus 6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 4899999999999999999986 4666 544543
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0087 Score=56.98 Aligned_cols=65 Identities=11% Similarity=0.062 Sum_probs=48.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++|.++| .|.+|..++++|++.|++|+++.|++++...+...+.. -.++..++.+++|.++.+..
T Consensus 5 ~~IGfIG-LG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~-------~~~s~~e~a~~advVi~~l~ 69 (1378)
T PLN02858 5 GVVGFVG-LDSLSFELASSLLRSGFKVQAFEISTPLMEKFCELGGH-------RCDSPAEAAKDAAALVVVLS 69 (1378)
T ss_pred CeEEEEc-hhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCe-------ecCCHHHHHhcCCEEEEEcC
Confidence 4799999 69999999999999999999999998766554322221 12345566777888777665
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.017 Score=45.71 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=28.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEE
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTL 31 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~ 31 (189)
++++|.|.+|.+|+.++..|+++|++|++.
T Consensus 159 k~v~vIG~S~ivG~Pla~lL~~~gatVtv~ 188 (284)
T PRK14179 159 KHAVVIGRSNIVGKPMAQLLLDKNATVTLT 188 (284)
T ss_pred CEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence 689999999999999999999999999987
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.076 Score=43.78 Aligned_cols=111 Identities=18% Similarity=0.185 Sum_probs=64.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC----hhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK----LADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~~~~~~ 76 (189)
.+|+|.|. |++|+.++..|.+.|. ++++++.+.-....+.+....+-..|+-. .+.+++.+...
T Consensus 177 ~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~i---------- 245 (393)
T PRK06153 177 QRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNM---------- 245 (393)
T ss_pred CcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHh----------
Confidence 47999995 9999999999999985 78888776444443322211122334432 23333333332
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
+..+..+...+ +++.+. .+.++|+||.|... ..+=..+.+.|.+.++
T Consensus 246 ---------n~~I~~~~~~I-~~~n~~-~L~~~DiV~dcvDn----------~~aR~~ln~~a~~~gI 292 (393)
T PRK06153 246 ---------RRGIVPHPEYI-DEDNVD-ELDGFTFVFVCVDK----------GSSRKLIVDYLEALGI 292 (393)
T ss_pred ---------CCeEEEEeecC-CHHHHH-HhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCC
Confidence 11344444444 555543 67899999998742 2222334566666664
|
|
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0072 Score=50.14 Aligned_cols=34 Identities=35% Similarity=0.569 Sum_probs=32.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|.+|+|+|| |.+|..++.+|.+.|++|+++.|..
T Consensus 1 ~~~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~ 34 (410)
T PRK12409 1 MSHIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 789999996 9999999999999999999999875
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.021 Score=47.24 Aligned_cols=67 Identities=19% Similarity=0.185 Sum_probs=49.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhh--cCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~ 71 (189)
|+|+|+|+ |..|+.++..+.+.|++|++++.++......... .++..|..|++.+.+..+ +.|.++.
T Consensus 13 ~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~ 81 (395)
T PRK09288 13 TRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--RSHVIDMLDGDALRAVIEREKPDYIVP 81 (395)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh--heEECCCCCHHHHHHHHHHhCCCEEEE
Confidence 58999995 8999999999989999999999887553321111 246677788888888777 5665543
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.044 Score=42.64 Aligned_cols=36 Identities=33% Similarity=0.432 Sum_probs=28.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEE-ecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTL-LRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~-~r~~~ 36 (189)
|+||.|.|++|..|+.+++.+.+. +.++... .|.++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 789999999999999999999987 5665444 55443
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.036 Score=46.68 Aligned_cols=50 Identities=8% Similarity=-0.146 Sum_probs=35.4
Q ss_pred HHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCc--cEEEEecc
Q psy3626 103 KKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNV--SVVSVCLS 152 (189)
Q Consensus 103 ~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~--~~~i~iSS 152 (189)
.+.+.++|++|.++|........ +.|...++.+.+...+.+. .+++++.|
T Consensus 194 ~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 194 DVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 46778899999999876543222 3566677888888888765 67777665
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0048 Score=51.59 Aligned_cols=71 Identities=23% Similarity=0.219 Sum_probs=51.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++|+|+ |.+|..+++.|...| .+|+++.|++++...+.. .+.. ....+++.+.+.++|.++.+++...|
T Consensus 181 ~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-----~i~~~~l~~~l~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 181 KKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-----AVKFEDLEEYLAEADIVISSTGAPHP 253 (417)
T ss_pred CEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-----EeeHHHHHHHHhhCCEEEECCCCCCc
Confidence 57999996 999999999999998 789999998765433211 1111 12335677888899999988765333
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 189 | ||||
| 1hdo_A | 206 | Human Biliverdin Ix Beta Reductase: Nadp Complex Le | 3e-39 | ||
| 3dhn_A | 227 | Crystal Structure Of The Putative Epimerase Q89z24_ | 3e-04 |
| >pdb|1HDO|A Chain A, Human Biliverdin Ix Beta Reductase: Nadp Complex Length = 206 | Back alignment and structure |
|
| >pdb|3DHN|A Chain A, Crystal Structure Of The Putative Epimerase Q89z24_bactn From Bacteroides Thetaiotaomicron. Northeast Structural Genomics Consortium Target Btr310 Length = 227 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 5e-42
Identities = 84/187 (44%), Positives = 103/187 (55%), Gaps = 43/187 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++ G EV
Sbjct: 3 VKKIAIFGATGQTGLTTLAQAVQAGYEV-------------------------------- 30
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
L+RD RLPSE ++ GDVL+ ADV K + G+D V+V LGTRN
Sbjct: 31 TV-----------LVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 79
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++P+KVPP V DDH RM+ VL
Sbjct: 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL 139
Query: 181 KDSGLNY 187
++SGL Y
Sbjct: 140 RESGLKY 146
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-26
Identities = 34/192 (17%), Positives = 62/192 (32%), Gaps = 54/192 (28%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
MK + I GA G + +
Sbjct: 23 MKNVLILGAGGQIARHVINQLADKQ----------------------------------- 47
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
++ R P ++ Y + +II GDVL A +K+A++G+D V L +
Sbjct: 48 -------TIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEP-----SKVPPMFHNVNDDHQR 175
+ +++ AMK +V + LS ++ E + +R
Sbjct: 101 -------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRR 153
Query: 176 MYNVLKDSGLNY 187
+ ++ SGL Y
Sbjct: 154 AADAIEASGLEY 165
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 5e-21
Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 55/199 (27%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKI + GA+G G L AL +G EV ++R P+++ E
Sbjct: 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------------------- 44
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALG-TR 119
+ +++ + DV L +V + +G D V+ A
Sbjct: 45 -------------------------NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW 79
Query: 120 NDLSPTTVMSEGMKNIVTAMKEYNVS-VVSVCLSAFLFYEPSKVPPMFHNVNDD------ 172
N+ + I+ +K+ V+ + V + LF P V ++
Sbjct: 80 NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVK 139
Query: 173 ---HQRMYNVLKDSGLNYI 188
+ ++K+ ++++
Sbjct: 140 ALGEFYLNFLMKEKEIDWV 158
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 4e-20
Identities = 30/196 (15%), Positives = 50/196 (25%), Gaps = 60/196 (30%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
I I GA G L
Sbjct: 5 YXYITILGAAGQIAQXLTATLLTYT----------------------------------- 29
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGVVVALG 117
+ + R + H +V +I+G +++A+ + V V
Sbjct: 30 -------DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82
Query: 118 TRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE------PSKVPPMFHNVND 171
M +IV A+ N+ V A L E + +
Sbjct: 83 E---------SGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQ 133
Query: 172 DHQRMYNVLKDSGLNY 187
++ NVL++S LNY
Sbjct: 134 GERQARNVLRESNLNY 149
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 4e-18
Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 51/190 (26%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
KI I G+TG G L++ ++ R +++P ++ V+ + DV +
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ--YNNVKAVHFDVDWTPE---- 55
Query: 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL 122
++ K + G D ++ G+
Sbjct: 56 --------------------------------------EMAKQLHGMDAIINVSGSGGK- 76
Query: 123 SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDD-----HQRMY 177
S V G ++ A ++ V + LS +P K + D H
Sbjct: 77 SLLKVDLYGAVKLMQAAEKAEVKRF-ILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADL 135
Query: 178 NVLKDSGLNY 187
+ K++ L+Y
Sbjct: 136 YLTKETNLDY 145
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 4e-16
Identities = 24/188 (12%), Positives = 55/188 (29%), Gaps = 48/188 (25%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
++ + GA G L +G E ++R+ ++ P
Sbjct: 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGP----------------------E 60
Query: 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTR--- 119
+ + ++ + ++ D A D VV A G+
Sbjct: 61 LRERGASDI--------------------VVANLE--EDFSHAFASIDAVVFAAGSGPHT 98
Query: 120 NDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179
+ G + ++ + + +S+ +P + P + + +
Sbjct: 99 GADKTILIDLWGAIKTIQEAEKRGIKRF-IMVSSVGTVDPDQGPMNMRHYLVAKRLADDE 157
Query: 180 LKDSGLNY 187
LK S L+Y
Sbjct: 158 LKRSSLDY 165
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 70.4 bits (172), Expect = 3e-15
Identities = 28/198 (14%), Positives = 54/198 (27%), Gaps = 60/198 (30%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
KI I GATG G LE A +G EV ++R+ ++ H + I+Q D+
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-HKDINILQKDI--------- 51
Query: 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL 122
+ ++ VV A G D
Sbjct: 52 ------------------------------------FDLTLSDLSDQNVVVDAYGISPDE 75
Query: 123 SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF----------LFYEPSKVPPMFHNVNDD 172
+ V + ++++ + + V A L ++
Sbjct: 76 AEKHV--TSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARA 133
Query: 173 HQRMYNV--LKDSGLNYI 188
+ + ++
Sbjct: 134 QAKQLEHLKSHQAEFSWT 151
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 67.4 bits (164), Expect = 3e-14
Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 57/198 (28%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
KIA+ GATG G + A ++G EV ++RDPQ+
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD---------------------- 39
Query: 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL 122
+ L + ++ D VV AL
Sbjct: 40 -----------------------RLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGS 76
Query: 123 SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY------------EPSKVPPMFHNVN 170
+ + ++V+ ++ + V + SA L E + P +
Sbjct: 77 GRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGAL 136
Query: 171 DDHQRMYNVLKDSGLNYI 188
+ + ++ +N+I
Sbjct: 137 YQYYEYQFLQMNANVNWI 154
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 4e-12
Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 31/192 (16%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLAD 58
+ + + GA+G TG + + L+R Q + + ++ GD+
Sbjct: 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKIGGEADVFIGDITDADS 62
Query: 59 VKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGT 118
+ A +G D L + T + + +K + G
Sbjct: 63 INPAFQGIDALVILT------------SA-----------VPKMKPGFDPTKGGRPEFIF 99
Query: 119 RNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPM---FHNVNDDHQR 175
+ P V G KN + A K V + V + + + P N+ ++
Sbjct: 100 EDGQYPEQVDWIGQKNQIDAAKVAGVKHI-VVVGS-MGGTNPDHPLNKLGNGNILVWKRK 157
Query: 176 MYNVLKDSGLNY 187
L DSG Y
Sbjct: 158 AEQYLADSGTPY 169
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 1e-09
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLAD 58
K + I GA+G TG L+ L+QGL +V + R E + V D KL D
Sbjct: 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDD 77
Query: 59 VKKAIEGKD 67
A +G D
Sbjct: 78 YASAFQGHD 86
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 1e-09
Identities = 32/188 (17%), Positives = 57/188 (30%), Gaps = 41/188 (21%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKK 61
KI I G TG G + A++K G L+R
Sbjct: 3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAA---------------------- 40
Query: 62 AIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND 121
+ + + V +++GD+ + KAI+ D V+ A G
Sbjct: 41 -----------NPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAG---- 85
Query: 122 LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181
++ E I+ A+KE L + V ++ + V++
Sbjct: 86 ----RLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIE 141
Query: 182 DSGLNYIA 189
G+ Y
Sbjct: 142 AEGVPYTY 149
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 2e-09
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 42/186 (22%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKK 61
+I + GATG G +A+L G L+R+ +
Sbjct: 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNS-------------------- 44
Query: 62 AIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND 121
Q L S S I+ G + A + +A++ D V+ +G
Sbjct: 45 --------------EKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVG---- 86
Query: 122 LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181
++ E NI+ A+KE + +V + ++ ++
Sbjct: 87 ----SLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIE 142
Query: 182 DSGLNY 187
G+ Y
Sbjct: 143 AEGIPY 148
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 7e-09
Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 44/190 (23%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
M+KI I+G TG G + A+L R P S V++ +
Sbjct: 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLT--PDSTPSSVQLRE---------- 51
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
V II+G++ + + ++ D V+ AL
Sbjct: 52 ----------------------EFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPM 89
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF-LFYEPSKVPPMFHNVNDDHQRMYNV 179
S +I+ A+K + S F + K P F +V + + +
Sbjct: 90 ISSQ--------IHIINAIKAAGN-IKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRA 140
Query: 180 LKDSGLNYIA 189
++ + L Y
Sbjct: 141 IEAAALPYTY 150
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 7e-09
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62
K A+ GATG+ G + A G ++ + R ++ + + E ++L A +++A
Sbjct: 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA 74
Query: 63 IEGKDGL 69
+ G DG+
Sbjct: 75 LRGLDGV 81
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-06
Identities = 13/84 (15%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 66 KDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVV-VALGTRNDLSP 124
G ++ + R ++ + + E ++L A +++A+ G DGV+ A +
Sbjct: 35 AAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRR 94
Query: 125 TTVMS----EGMKNIVTAMKEYNV 144
A + V
Sbjct: 95 WQEEVASALGQTNPFYAACLQARV 118
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 7e-09
Identities = 24/167 (14%), Positives = 57/167 (34%), Gaps = 23/167 (13%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSK--------VEIIQGDV 53
++ I G TG G + A++ G L R + ++I+ +
Sbjct: 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 64
Query: 54 LKLADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVV 113
+ A++ D + + L L ++++++ +K+A K +
Sbjct: 65 DDHQRLVDALKQVDVV-ISALAGGV--LSHHILEQLKLVE-------AIKEAGNIKRFLP 114
Query: 114 VALGTRND-----LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155
G D L P ++ + + A++ ++ V + F
Sbjct: 115 SEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFA 161
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 4e-08
Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 46/188 (24%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKK 61
++ I GATG G A+L L R R PS
Sbjct: 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPS--------------------- 49
Query: 62 AIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVV--ALGTR 119
+ + I+ G + + ++K ++ + +V +G
Sbjct: 50 ---------------KAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGE 94
Query: 120 NDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179
+ L +V AMK + + N+ + +R+ +
Sbjct: 95 SILDQ--------IALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQL 146
Query: 180 LKDSGLNY 187
+++SG+ +
Sbjct: 147 VEESGIPF 154
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 5e-08
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD----PQRLPSEYHSKVEIIQGDVLKLA 57
KI IFG TG G ++ +LK G R L I++G++ +
Sbjct: 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHE 71
Query: 58 DVKKAIEGKDGLEVCTL 74
+ + ++ D + + L
Sbjct: 72 KLVELMKKVDVV-ISAL 87
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 3e-07
Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSK--VEIIQGDVLKLAD 58
K + +FG TG G L+ G +V + R+P++ ++ E++QGD
Sbjct: 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVI 65
Query: 59 VKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 103
++ A+ G + T + E + D+ + +
Sbjct: 66 MELALNGAYATFIVTNYWESCSQEQEVKQGKLLA--DLARRLGLH 108
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-06
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLL-RDPQRLPSEYHSKVEIIQGDVLKLADVKK 61
I + GATG G A+ ++ + R+ +++P ++ KV + Q D + +
Sbjct: 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVE 61
Query: 62 AIEGKDGL 69
A +G D +
Sbjct: 62 AFKGMDTV 69
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 6e-06
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-----QRLPSEYHSKVEIIQGDVL-K 55
K IA+ GATG G + A G V + + L + V + QG +L
Sbjct: 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAI--PNVTLFQGPLLNN 63
Query: 56 LADVKKAIEGKDGL 69
+ + EG
Sbjct: 64 VPLMDTLFEGAHLA 77
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-05
Identities = 21/129 (16%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
Query: 59 VKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGT 118
++ ++ ++ ++R+ ++ + VE+ GD + ++KA G ++ G
Sbjct: 17 IQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76
Query: 119 RNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYN 178
D T++ N+V A ++ V + + F E S +P H
Sbjct: 77 HYD---NTLLIVQHANVVKAARDAGVKHI-AYTG-YAFAEESIIPLA-----HVHLATEY 126
Query: 179 VLKDSGLNY 187
++ + + Y
Sbjct: 127 AIRTTNIPY 135
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 1e-04
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 4 IAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKK 61
IA+ GATG G ++ LK+ ++ ++R+ ++ + VE+ GD + ++K
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK 62
Query: 62 AIEGKDGL 69
A G L
Sbjct: 63 AFAGVSKL 70
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 2e-04
Identities = 14/67 (20%), Positives = 20/67 (29%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
I + GA + + + V D L V Q D A +
Sbjct: 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLA 64
Query: 61 KAIEGKD 67
KA+ G D
Sbjct: 65 KALGGFD 71
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 2e-04
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 7/72 (9%)
Query: 3 KIA-IFGATGMTGLCSLEAALKQGL-----EVCTLLRDPQRLPSEYHSKVEIIQGDVLKL 56
+A I G TG+ G E +V + R + E + + +Q D+
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHE-DNPINYVQCDISDP 60
Query: 57 ADVKKAIEGKDG 68
D + +
Sbjct: 61 DDSQAKLSPLTD 72
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 2e-04
Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+ KI I G G GL QG EV L R Q +P + V+ + DV + +
Sbjct: 3 LSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMP----AGVQTLIADVTRPDTLA 57
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQ--GDVLKLADVKKAI 106
+ + + V + S VE ++ L+ A ++
Sbjct: 58 SIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVF 105
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 3e-04
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKL 56
K++ + GATG+TG L+ L + +V R H +++ G + +L
Sbjct: 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL----AEHPRLDNPVGPLAEL 58
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 3e-04
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 4 IAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKK 61
IAI GATG G +E+ +K ++ ++R+P + + + + Q D A +
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTS 61
Query: 62 AIEGKDGL 69
A++G + L
Sbjct: 62 ALQGVEKL 69
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 5e-04
Identities = 23/131 (17%), Positives = 54/131 (41%), Gaps = 16/131 (12%)
Query: 59 VKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGT 118
++ ++ ++ ++R+P + + + + Q D A + A++G + +++
Sbjct: 16 IESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLL---- 71
Query: 119 RNDLSPTTVMSEG--MKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRM 176
+S + V +N++ A K V + S L + S + D+H
Sbjct: 72 ---ISSSEVGQRAPQHRNVINAAKAAGVKFI-AYTS-LLHADTSPLGLA-----DEHIET 121
Query: 177 YNVLKDSGLNY 187
+L DSG+ Y
Sbjct: 122 EKMLADSGIVY 132
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 189 | |||
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.9 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.89 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.88 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.86 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.85 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.85 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.85 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.85 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.85 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.84 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.84 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.84 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.84 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.84 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.84 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.83 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.83 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.83 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.82 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.82 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.82 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.82 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.82 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.81 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.81 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.81 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.81 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.81 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.81 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.81 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.81 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.81 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.8 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.8 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.8 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.8 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.8 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.8 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.8 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.8 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.8 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.8 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.79 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.79 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.78 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.78 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.78 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.78 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.78 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.78 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.78 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.78 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.77 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.77 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.77 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.77 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.77 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.77 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.77 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.77 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.77 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.76 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.76 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.76 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.76 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.76 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.76 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.75 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.75 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.75 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.75 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.75 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.75 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.74 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.74 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.74 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.73 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.73 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.73 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.73 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.72 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.72 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.72 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.72 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.72 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.71 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.71 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.71 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.7 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.7 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.69 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.69 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.69 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.69 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.69 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.69 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.68 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.68 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.68 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.68 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.68 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.68 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.68 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.68 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.68 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.68 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.67 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.67 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.67 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.67 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.67 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.67 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.67 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.67 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.67 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.67 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.67 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.67 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.66 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.66 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.66 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.66 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.66 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.66 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.66 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.66 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.66 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.66 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.66 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.66 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.66 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.66 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.66 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.66 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.66 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.66 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.66 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.66 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.66 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.66 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.65 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.65 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.65 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.65 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.65 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.65 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.65 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.65 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.65 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.65 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.65 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.65 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.65 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.65 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.65 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.65 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.65 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.65 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.65 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.65 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.65 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.65 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.65 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.65 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.65 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.65 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.65 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.65 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.65 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.65 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.65 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.65 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.65 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.64 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.64 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.64 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.64 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.64 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.64 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.64 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.64 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.64 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.64 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.64 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.64 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.64 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.64 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.64 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.63 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.63 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.63 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.63 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.63 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.63 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.63 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.63 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.63 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.63 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.63 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.63 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.63 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.63 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.62 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.62 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.62 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.62 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.62 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.62 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.62 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.62 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.62 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.62 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.62 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.62 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.62 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.62 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.62 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.62 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.61 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.61 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.61 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.61 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.61 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.61 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.61 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.61 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.61 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.61 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.61 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.61 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.61 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.61 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.61 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.61 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.6 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.6 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.59 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.59 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.59 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.59 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.59 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.59 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.59 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.59 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.59 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.59 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.58 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.58 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.58 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.58 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.58 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.58 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.57 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.57 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.57 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.57 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.57 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.57 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.57 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.56 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.56 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.56 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.56 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.55 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.55 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.55 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.55 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.55 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.55 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.55 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.55 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.55 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.55 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.54 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.54 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.54 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.54 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.54 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.54 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.53 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.53 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.52 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.52 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.51 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.51 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.51 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.5 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.5 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.49 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.49 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.48 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.47 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.46 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.46 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.46 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.43 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.41 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.41 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.35 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.33 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.22 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.22 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.17 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.16 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.16 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.14 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.13 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.11 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.1 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.09 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.08 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.07 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 99.02 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.01 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 99.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.99 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.88 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.81 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.8 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.66 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.66 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.66 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.63 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.62 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.6 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.6 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.56 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.54 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.53 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.52 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.5 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.39 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.36 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.35 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.33 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.28 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.2 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 98.2 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.07 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.04 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.03 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 98.02 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 98.01 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 98.0 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.99 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.98 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.96 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.93 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.92 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.9 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.9 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.87 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.84 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.82 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.81 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.81 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.77 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.77 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.76 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.75 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.75 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.75 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.66 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.65 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.65 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.61 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.6 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 97.6 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.59 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.58 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.57 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.55 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.51 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.51 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.49 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.49 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.47 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.47 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.47 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.46 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.46 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.44 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.43 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.43 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.42 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.42 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.42 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.41 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.4 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.4 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.39 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.39 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.37 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.37 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 97.36 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.36 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.35 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.35 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.3 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.3 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 97.29 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.28 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.28 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.28 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 97.27 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.27 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.25 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.24 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.24 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.24 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.24 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.23 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.23 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.23 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 97.22 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.22 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.22 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.22 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.21 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.2 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.2 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.2 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.2 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 97.19 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.19 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.19 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 97.19 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.18 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.18 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.18 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.17 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.16 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.16 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.16 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.16 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.13 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.13 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.12 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.12 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.1 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.1 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.08 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 97.08 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.08 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.06 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.05 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.05 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.04 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.04 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.04 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.04 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.03 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.02 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.02 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.0 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 96.99 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 96.98 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.98 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.96 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.95 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 96.95 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.95 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 96.94 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 96.94 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.94 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.94 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.93 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 96.93 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 96.93 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.92 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.92 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.92 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.91 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 96.91 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.89 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.89 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.89 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.89 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 96.89 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.88 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 96.88 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.88 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 96.87 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.87 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.86 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.86 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 96.85 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.85 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 96.84 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 96.84 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.83 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.81 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 96.81 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 96.8 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 96.77 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.76 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.76 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.75 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 96.75 |
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-23 Score=152.30 Aligned_cols=145 Identities=59% Similarity=0.911 Sum_probs=111.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+|++|++++++|+++|++|++++|+++........+++++.+|++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~----------------------- 60 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD----------------------- 60 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHH-----------------------
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHH-----------------------
Confidence 589999999999999999999999999999998766543323445555555555554
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSK 161 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~ 161 (189)
+.+.++++|++|+++|........++|..++.++++++++.+++++|++||..++...+.
T Consensus 61 --------------------~~~~~~~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~ 120 (206)
T 1hdo_A 61 --------------------VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120 (206)
T ss_dssp --------------------HHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC
T ss_pred --------------------HHHHHcCCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccc
Confidence 445555567777777765443445678999999999999999999999999987765443
Q ss_pred CCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 162 VPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
.|....+|...|...|+++++.+++|++
T Consensus 121 ~~~~~~~y~~~K~~~e~~~~~~~i~~~~ 148 (206)
T 1hdo_A 121 VPPRLQAVTDDHIRMHKVLRESGLKYVA 148 (206)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred ccccchhHHHHHHHHHHHHHhCCCCEEE
Confidence 3335567888899999999988888763
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=153.04 Aligned_cols=144 Identities=21% Similarity=0.283 Sum_probs=102.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||+|++++++|+++|++|++++|++++...+. .+++++.+|++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~---------------------- 60 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDE---------------------- 60 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHH----------------------
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHH----------------------
Confidence 689999999999999999999999999999999977655431 445555555555555
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-CCcceehhhHHHHHHHHHHCCccEEEEeccceeecCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEP 159 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~ 159 (189)
+.++++++|++|+++|..... ...++|+.++.++++++++.++++||++||..++...
T Consensus 61 ---------------------~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~ 119 (227)
T 3dhn_A 61 ---------------------VCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIA 119 (227)
T ss_dssp ---------------------HHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEE
T ss_pred ---------------------HHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCC
Confidence 445555567777777654322 2456799999999999999999999999998765432
Q ss_pred CC------CCCCCccchhhHHHHH---HHhh-hcCCCCC
Q psy3626 160 SK------VPPMFHNVNDDHQRMY---NVLK-DSGLNYI 188 (189)
Q Consensus 160 ~~------~p~~~~~~~~~~~~~~---~~l~-~~~~~~t 188 (189)
+. .+.+...|...|...| +.++ +.+++|+
T Consensus 120 ~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 158 (227)
T 3dhn_A 120 PGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWV 158 (227)
T ss_dssp TTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEE
T ss_pred CCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEE
Confidence 21 1223455777788877 4444 4567765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=151.61 Aligned_cols=142 Identities=19% Similarity=0.203 Sum_probs=108.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccC-hhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLK-LADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+||||+|++|++++++|+++|++|++++|+++..... .+++++.+|+++ +++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~---------------------- 56 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEE---------------------- 56 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHH----------------------
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHH----------------------
Confidence 4899999999999999999999999999999997765543 445555555555 544
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPS 160 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~ 160 (189)
+.++++++|++|+++|.... ...++|+.++.+++++|++.++++||++||..++...+
T Consensus 57 ---------------------~~~~~~~~d~vi~~ag~~~~-~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~ 114 (219)
T 3dqp_A 57 ---------------------MAKQLHGMDAIINVSGSGGK-SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEK 114 (219)
T ss_dssp ---------------------HHTTTTTCSEEEECCCCTTS-SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGG
T ss_pred ---------------------HHHHHcCCCEEEECCcCCCC-CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCc
Confidence 45555566788888876542 35678999999999999999999999999987654211
Q ss_pred C---CCCCCccchhhHHHHHHHh-hhcCCCCCC
Q psy3626 161 K---VPPMFHNVNDDHQRMYNVL-KDSGLNYIA 189 (189)
Q Consensus 161 ~---~p~~~~~~~~~~~~~~~~l-~~~~~~~t~ 189 (189)
. .+.+...|...|...|+++ ++.+++|++
T Consensus 115 ~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~i 147 (219)
T 3dqp_A 115 WIGAGFDALKDYYIAKHFADLYLTKETNLDYTI 147 (219)
T ss_dssp CCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred ccccccccccHHHHHHHHHHHHHHhccCCcEEE
Confidence 0 0112556888999999999 677888763
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-21 Score=151.37 Aligned_cols=141 Identities=21% Similarity=0.135 Sum_probs=104.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||+|++++++|+++|++|++++|++.... + .+++++.+|++ ++++.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~--~~~~~~~~Dl~-~~~~~~~~----------------- 60 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I--NDYEYRVSDYT-LEDLINQL----------------- 60 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHT-----------------
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C--CceEEEEcccc-HHHHHHhh-----------------
Confidence 579999999999999999999999999999999844332 2 25566666666 65555544
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC---CCcceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL---SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~---~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
+++|+|||+++..... ...++|+.++.+++++|++.++++||++||..+++
T Consensus 61 --------------------------~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 61 --------------------------NDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp --------------------------TTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred --------------------------cCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 4556677776654322 33567999999999999999999999999988875
Q ss_pred CCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 158 EPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 158 ~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
.... .+.+...|..+|...|+++++ .+++|+
T Consensus 115 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 156 (311)
T 3m2p_A 115 DETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIK 156 (311)
T ss_dssp CGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred CCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 4321 223456788889999988874 577765
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.7e-21 Score=152.88 Aligned_cols=145 Identities=17% Similarity=0.172 Sum_probs=102.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||+|++++++|+++|++|++++|+++....+...+++++.+|++++++++++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~------------------ 74 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA------------------ 74 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH------------------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH------------------
Confidence 46899999999999999999999999999999987655433223455555666555555444
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-----CCCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-----LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-----~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
++++|+|||+++.... ....++|+.++.+++++|++.++++||++||..+
T Consensus 75 -------------------------~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~ 129 (342)
T 2x4g_A 75 -------------------------LRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYA 129 (342)
T ss_dssp -------------------------TTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGG
T ss_pred -------------------------HcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHh
Confidence 4455666666664321 1224578999999999999999999999999988
Q ss_pred ecCCCC--------CCCC----CccchhhHHHHHHHhhh---cCCCCC
Q psy3626 156 FYEPSK--------VPPM----FHNVNDDHQRMYNVLKD---SGLNYI 188 (189)
Q Consensus 156 ~~~~~~--------~p~~----~~~~~~~~~~~~~~l~~---~~~~~t 188 (189)
+...+. .+.+ ...|..+|...|+++++ .+++|+
T Consensus 130 ~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~g~~~~ 177 (342)
T 2x4g_A 130 MPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVV 177 (342)
T ss_dssp SCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred hCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhcCCcEE
Confidence 754322 1122 45678889889888774 366665
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=155.02 Aligned_cols=156 Identities=19% Similarity=0.162 Sum_probs=110.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|++...... +.......
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------~~~~~~~~-------------- 73 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYN-----------------LDEVKTLV-------------- 73 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHH-----------------HHHHHHTS--------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-----------------hhhhhhcc--------------
Confidence 47999999999999999999999999999999986543211 00000000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
+.....++..+.+|+.+.+.+.++++++|+|||+++..... ...++|+.++.+++++|++.++++||++||.
T Consensus 74 -~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~ 152 (351)
T 3ruf_A 74 -STEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASS 152 (351)
T ss_dssp -CHHHHTTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred -ccccCCceEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecH
Confidence 00001255666677777777777777778888888754311 1235789999999999999999999999999
Q ss_pred eeecCCCCCC-------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSKVP-------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~~p-------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.+++..+..| .+...|..+|...|++++ +.+++|+
T Consensus 153 ~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 198 (351)
T 3ruf_A 153 STYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTI 198 (351)
T ss_dssp GGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred HhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEE
Confidence 8886543322 335667888988888776 3477765
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=143.66 Aligned_cols=139 Identities=24% Similarity=0.375 Sum_probs=98.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
||+|+||||+|+||++++++|+++| ++|++++|+++....+...++.++.+|++++++++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~------------------- 83 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALK------------------- 83 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHH-------------------
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHH-------------------
Confidence 6789999999999999999999999 89999999987766554455555666665555544
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEP 159 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~ 159 (189)
++++++|++|+++|... ....+++++++|++.++++||++||..++...
T Consensus 84 ------------------------~~~~~~D~vv~~a~~~~-------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~ 132 (236)
T 3qvo_A 84 ------------------------QAMQGQDIVYANLTGED-------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEV 132 (236)
T ss_dssp ------------------------HHHTTCSEEEEECCSTT-------HHHHHHHHHHHHHHTTCCEEEEECCCCC----
T ss_pred ------------------------HHhcCCCEEEEcCCCCc-------hhHHHHHHHHHHHHcCCCEEEEEecceecCCC
Confidence 44555677888776532 23568899999999999999999998887643
Q ss_pred CCCCC-----CCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 160 SKVPP-----MFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 160 ~~~p~-----~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
+..+. ....+...+...++.+++.+++|++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 167 (236)
T 3qvo_A 133 PGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTI 167 (236)
T ss_dssp ------------CGGGHHHHHHHHHHHTSCSEEEE
T ss_pred CcccccchhhcccchHHHHHHHHHHHHHCCCCEEE
Confidence 32111 1122344566778888888888763
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=156.19 Aligned_cols=144 Identities=18% Similarity=0.165 Sum_probs=105.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCccc-CCceeEEecccc-ChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEY-HSKVEIIQGDVL-KLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+|+||||+||||++++++|+++ |++|++++|+++....+. ..+++++.+|++ +++.+.+++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~------------ 91 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKK------------ 91 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHH------------
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhcc------------
Confidence 579999999999999999999998 999999999987665442 245666666666 66655555554
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
+|+|||+++..... ...++|+.++.+++++|++.+ ++||++
T Consensus 92 -------------------------------~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~ 139 (372)
T 3slg_A 92 -------------------------------CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFP 139 (372)
T ss_dssp -------------------------------CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEE
T ss_pred -------------------------------CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEe
Confidence 45566665543321 113568899999999999998 999999
Q ss_pred ccceeecCCCCCC--------------CCCccchhhHHHHHHHhhhc---CCCCC
Q psy3626 151 LSAFLFYEPSKVP--------------PMFHNVNDDHQRMYNVLKDS---GLNYI 188 (189)
Q Consensus 151 SS~~~~~~~~~~p--------------~~~~~~~~~~~~~~~~l~~~---~~~~t 188 (189)
||..+++.....+ .+...|..+|...|+++++. +++|+
T Consensus 140 SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ 194 (372)
T 3slg_A 140 STSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFT 194 (372)
T ss_dssp CCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEE
Confidence 9988876533211 23335888899999888754 66665
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=144.14 Aligned_cols=140 Identities=20% Similarity=0.254 Sum_probs=97.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||||++|++++++|+++|++|++++|++++...+. .+++++.+|++++++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~----------------------- 56 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL----------------------- 56 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-----------------------
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-----------------------
Confidence 57999999999999999999999999999999876544332 445566666655443
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSK 161 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~ 161 (189)
+.+.++|++|+++|.... ....++.++++++++|++.+.+++|++||..+++..+.
T Consensus 57 ----------------------~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~ 112 (221)
T 3ew7_A 57 ----------------------SDLSDQNVVVDAYGISPD--EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED 112 (221)
T ss_dssp ----------------------HHHTTCSEEEECCCSSTT--TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------
T ss_pred ----------------------hhhcCCCEEEECCcCCcc--ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCC
Confidence 445667888888887443 35678999999999999998899999999877654321
Q ss_pred --------CCCCCccchhhHHHHHHH--hh--hcCCCCCC
Q psy3626 162 --------VPPMFHNVNDDHQRMYNV--LK--DSGLNYIA 189 (189)
Q Consensus 162 --------~p~~~~~~~~~~~~~~~~--l~--~~~~~~t~ 189 (189)
.+.+...|...|...+.. ++ +.+++||+
T Consensus 113 ~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~i 152 (221)
T 3ew7_A 113 GNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTY 152 (221)
T ss_dssp ------------CCCSCCHHHHHHHHHHHHTTTTTSCEEE
T ss_pred CccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEE
Confidence 111222344555555443 66 67888864
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-21 Score=145.65 Aligned_cols=142 Identities=22% Similarity=0.317 Sum_probs=104.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||||++|++++++|+++|++|++++|++++...+...+++++.+|++++++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~----------------------- 57 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE----------------------- 57 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-----------------------
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-----------------------
Confidence 479999999999999999999999999999998765544333455566666655543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSK 161 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~~ 161 (189)
+.++++|++|+++|..+.......|+.++++++++|++.+ +++|++||.++++..+.
T Consensus 58 ----------------------~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~ 114 (224)
T 3h2s_A 58 ----------------------ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGA 114 (224)
T ss_dssp ----------------------HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTC
T ss_pred ----------------------hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCC
Confidence 4456678889988886544456789999999999999999 99999999866543221
Q ss_pred ----------CCCCCccchhhHHHHHHH--h-hhcCCCCCC
Q psy3626 162 ----------VPPMFHNVNDDHQRMYNV--L-KDSGLNYIA 189 (189)
Q Consensus 162 ----------~p~~~~~~~~~~~~~~~~--l-~~~~~~~t~ 189 (189)
.|.+...|...|...|.+ + ++.+++|++
T Consensus 115 ~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~i 155 (224)
T 3h2s_A 115 DHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIG 155 (224)
T ss_dssp SSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEE
Confidence 222244566667666643 3 356788763
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=8.5e-21 Score=154.04 Aligned_cols=145 Identities=16% Similarity=0.018 Sum_probs=103.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|++.........+++++.+|+++++++.++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~------------------ 90 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV------------------ 90 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHH------------------
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHH------------------
Confidence 68999999999999999999999999999999987655433233455555666555555444
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-----C---CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-----L---SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-----~---~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
++++|+|||+++.... . ...++|+.++.+++++|++.++++||++||
T Consensus 91 -------------------------~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 91 -------------------------TEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp -------------------------HTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -------------------------hCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 4455666666664321 1 113478999999999999999999999999
Q ss_pred ceeecCCCC--------------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 153 AFLFYEPSK--------------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 153 ~~~~~~~~~--------------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
..++..... .+.+...|..+|...|++++. .+++|+
T Consensus 146 ~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 199 (379)
T 2c5a_A 146 ACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECR 199 (379)
T ss_dssp GGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred hheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCEE
Confidence 887653211 122345677888888887753 366654
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-21 Score=145.37 Aligned_cols=137 Identities=26% Similarity=0.297 Sum_probs=102.1
Q ss_pred Cc-eEEEEcCCChhhHHHHHHHH-HcCCcEEEEecCCC-CCCcc--cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 1 MK-KIAIFGATGMTGLCSLEAAL-KQGLEVCTLLRDPQ-RLPSE--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~-~i~ItGatG~iG~~l~~~L~-~~g~~v~~~~r~~~-~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|| +++||||+|++|++++++|+ ++|++|++++|+++ .+..+ ...++.+
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--------------------------- 56 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTV--------------------------- 56 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEE---------------------------
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEE---------------------------
Confidence 44 49999999999999999999 79999999999876 55443 2334444
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
+.+|+.+++++.+.++++|++|+++|.. |+. +++++++|++.+.++||++||..+
T Consensus 57 ----------------~~~D~~d~~~~~~~~~~~d~vv~~ag~~--------n~~-~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 57 ----------------IEGSFQNPGXLEQAVTNAEVVFVGAMES--------GSD-MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp ----------------EECCTTCHHHHHHHHTTCSEEEESCCCC--------HHH-HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred ----------------EECCCCCHHHHHHHHcCCCEEEEcCCCC--------Chh-HHHHHHHHHhcCCCeEEEEeecee
Confidence 4455555555555666678888888753 445 999999999999999999999887
Q ss_pred ecCCCCCC-----CCCc-cchhhHHHHHHHhhhcCCCCCC
Q psy3626 156 FYEPSKVP-----PMFH-NVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 156 ~~~~~~~p-----~~~~-~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
+...+... .... .|...|...++.+++.+++|++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~ 151 (221)
T 3r6d_A 112 SGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTI 151 (221)
T ss_dssp TSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEE
T ss_pred cCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEE
Confidence 65322100 0111 5788899999999999988863
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=150.15 Aligned_cols=147 Identities=16% Similarity=0.152 Sum_probs=104.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|...........+++++.+|++++++++++++..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------------- 66 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQE-------------- 66 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHS--------------
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhc--------------
Confidence 899999999999999999999999999999999765433222235666667776666665555410
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++|+|||+++..... ...++|+.++.+++++|++.++++||++||.
T Consensus 67 ---------------------------~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 119 (330)
T 2c20_A 67 ---------------------------NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTA 119 (330)
T ss_dssp ---------------------------CEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred ---------------------------CCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 456666666654211 1235789999999999999999999999998
Q ss_pred eeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 154 FLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
.++..... .+.+...|..+|...|++++. .+++++
T Consensus 120 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 165 (330)
T 2c20_A 120 ATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYK 165 (330)
T ss_dssp GGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTSSCEEE
T ss_pred eeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 88754221 123346678889888888763 355554
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.6e-21 Score=146.55 Aligned_cols=142 Identities=17% Similarity=0.194 Sum_probs=108.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCce-eEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKV-EIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+||||+|++|++++++|+++|++|++++|+++....+...++ +++.+|++ ++
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~---------------------- 77 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--ED---------------------- 77 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SC----------------------
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HH----------------------
Confidence 689999999999999999999999999999998776554433455 66666666 22
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---CcceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
+.+.++++|++|+++|...... ..++|+.++.+++++|++.++++||++||.....
T Consensus 78 ---------------------~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~ 136 (236)
T 3e8x_A 78 ---------------------FSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVD 136 (236)
T ss_dssp ---------------------CGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSC
T ss_pred ---------------------HHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCC
Confidence 3344556788888887654332 2357899999999999999999999999965543
Q ss_pred CCCCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 158 EPSKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
.. ..+.....|..+|...|+++++.+++|++
T Consensus 137 ~~-~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~ 167 (236)
T 3e8x_A 137 PD-QGPMNMRHYLVAKRLADDELKRSSLDYTI 167 (236)
T ss_dssp GG-GSCGGGHHHHHHHHHHHHHHHHSSSEEEE
T ss_pred CC-CChhhhhhHHHHHHHHHHHHHHCCCCEEE
Confidence 21 11134567888999999999988888763
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=147.73 Aligned_cols=139 Identities=16% Similarity=0.088 Sum_probs=103.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+|+||||+||||++++++|+++|++|++++|+++. .++.++.+|+++++++.+++++
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~--------------- 77 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMG--------------- 77 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTT---------------
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhC---------------
Confidence 4789999999999999999999999999999998754 4456667777776666555554
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----CcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
+|+|||+++...... ..++|+.++.+++++|++.++++||++||..+
T Consensus 78 ----------------------------~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~v 129 (347)
T 4id9_A 78 ----------------------------VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEV 129 (347)
T ss_dssp ----------------------------CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG
T ss_pred ----------------------------CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHH
Confidence 456666665443221 23578999999999999999999999999888
Q ss_pred ecCC--C-------CCCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 156 FYEP--S-------KVPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 156 ~~~~--~-------~~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
++.. . ..+.+...|..+|...|++++ +.+++|+
T Consensus 130 yg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 175 (347)
T 4id9_A 130 YPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETV 175 (347)
T ss_dssp TTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSSSEEE
T ss_pred hCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhcCCceE
Confidence 7651 1 112345668888998888886 3466665
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=147.18 Aligned_cols=135 Identities=20% Similarity=0.254 Sum_probs=102.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+|+||||+||+|++++++|+++ |++|++++|+++....+...+++++.+|+++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d------------------------ 56 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQ------------------------ 56 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTC------------------------
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCC------------------------
Confidence 57999999999999999999998 9999999998765443222334444555554
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEP 159 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~ 159 (189)
++.+.++++++|++||+++... ..++|+.++.+++++|++.++++||++||..++..
T Consensus 57 -------------------~~~l~~~~~~~d~vi~~a~~~~---~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~- 113 (287)
T 2jl1_A 57 -------------------PESLQKAFAGVSKLLFISGPHY---DNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES- 113 (287)
T ss_dssp -------------------HHHHHHHTTTCSEEEECCCCCS---CHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-
T ss_pred -------------------HHHHHHHHhcCCEEEEcCCCCc---CchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-
Confidence 4455555556677888877531 12458899999999999999999999999876421
Q ss_pred CCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 160 SKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 160 ~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
| .+|..+|...|+++++.+++|++
T Consensus 114 ---~---~~y~~~K~~~E~~~~~~~~~~~i 137 (287)
T 2jl1_A 114 ---I---IPLAHVHLATEYAIRTTNIPYTF 137 (287)
T ss_dssp ---C---STHHHHHHHHHHHHHHTTCCEEE
T ss_pred ---C---CchHHHHHHHHHHHHHcCCCeEE
Confidence 1 25788899999999988888863
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-20 Score=143.77 Aligned_cols=135 Identities=16% Similarity=0.047 Sum_probs=101.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+|+||++++++|+++|++|++++|++.... ..++.++.+|+++++++.++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~------------------ 61 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAM------------------ 61 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHH------------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHH------------------
Confidence 468999999999999999999999999999999876544 24556666666666555444
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---CcceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
++++|++||++|...... ..++|+.++.++++++++.+.++||++||..+++
T Consensus 62 -------------------------~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g 116 (267)
T 3rft_A 62 -------------------------VAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIG 116 (267)
T ss_dssp -------------------------HTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGT
T ss_pred -------------------------HcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhC
Confidence 445677777777643322 2458999999999999999999999999988874
Q ss_pred CCC--------CCCCCCccchhhHHHHHHHhh
Q psy3626 158 EPS--------KVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 158 ~~~--------~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+ ..+.+...|..+|...|.+++
T Consensus 117 ~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~ 148 (267)
T 3rft_A 117 YYPQTERLGPDVPARPDGLYGVSKCFGENLAR 148 (267)
T ss_dssp TSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 321 112344567788888887775
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=141.52 Aligned_cols=138 Identities=22% Similarity=0.149 Sum_probs=105.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+|+||++++++|+++|+ +|++++|+++........++.++.+|+++++++++++++
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-------------- 84 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG-------------- 84 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSS--------------
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcC--------------
Confidence 6899999999999999999999999 999999998766543334566777777777666555544
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
+|++|+++|..... ...++|+.++.++++++++.+.++||++||..+
T Consensus 85 -----------------------------~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (242)
T 2bka_A 85 -----------------------------HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA 135 (242)
T ss_dssp -----------------------------CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred -----------------------------CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence 45666666543211 123468899999999999999899999999887
Q ss_pred ecCCCCCCCCCccchhhHHHHHHHhhhcCCC-CC
Q psy3626 156 FYEPSKVPPMFHNVNDDHQRMYNVLKDSGLN-YI 188 (189)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~-~t 188 (189)
+.. ....|...|...|++++..+++ |+
T Consensus 136 ~~~------~~~~Y~~sK~~~e~~~~~~~~~~~~ 163 (242)
T 2bka_A 136 DKS------SNFLYLQVKGEVEAKVEELKFDRYS 163 (242)
T ss_dssp CTT------CSSHHHHHHHHHHHHHHTTCCSEEE
T ss_pred CCC------CcchHHHHHHHHHHHHHhcCCCCeE
Confidence 642 2235888899999999988775 65
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=144.31 Aligned_cols=140 Identities=21% Similarity=0.172 Sum_probs=101.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-C-CceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-H-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+|+||||+||||++++++|+++|++|++++|++....... . .++.++.+|+++++++++++++.
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~------------ 88 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDL------------ 88 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHH------------
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhcc------------
Confidence 689999999999999999999999999999999864432111 1 34556666666665555554430
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----cceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----TTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+|||++|....... .++|+.++.+++++|.+.++++||++||..
T Consensus 89 -----------------------------~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~ 139 (333)
T 2q1w_A 89 -----------------------------QPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL 139 (333)
T ss_dssp -----------------------------CCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred -----------------------------CCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence 16777777765432100 456899999999999999999999999988
Q ss_pred eec----CCCCCC-----CCC-ccchhhHHHHHHHhhh
Q psy3626 155 LFY----EPSKVP-----PMF-HNVNDDHQRMYNVLKD 182 (189)
Q Consensus 155 ~~~----~~~~~p-----~~~-~~~~~~~~~~~~~l~~ 182 (189)
++. .... | .+. ..|..+|...|++++.
T Consensus 140 ~~g~~~~~~~~-~~~E~~~p~~~~Y~~sK~~~E~~~~~ 176 (333)
T 2q1w_A 140 CYGVKPIQQPV-RLDHPRNPANSSYAISKSANEDYLEY 176 (333)
T ss_dssp GGCSCCCSSSB-CTTSCCCCTTCHHHHHHHHHHHHHHH
T ss_pred HhCCCcccCCC-CcCCCCCCCCCchHHHHHHHHHHHHh
Confidence 775 2211 1 233 5678889999988876
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=145.56 Aligned_cols=147 Identities=10% Similarity=0.025 Sum_probs=100.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCC--cc----cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLP--SE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~--~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
||+|+|||||||||++++++|+++| ++|++++|...... .+ ...+++++.+|+++++++.+++++.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~------ 97 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER------ 97 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH------
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc------
Confidence 5799999999999999999999999 66777777642211 11 0134455555555555544444431
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCcc
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVS 145 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~ 145 (189)
++|+|||+++..... ...++|+.++.+++++|++.+++
T Consensus 98 -----------------------------------~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~ 142 (346)
T 4egb_A 98 -----------------------------------DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHI 142 (346)
T ss_dssp -----------------------------------TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTS
T ss_pred -----------------------------------CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 167777777754322 12358999999999999999999
Q ss_pred EEEEeccceeecCCCC--------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 146 VVSVCLSAFLFYEPSK--------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~--------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+||++||..+++..+. .+.+...|..+|...|+++++ .+++|+
T Consensus 143 ~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 197 (346)
T 4egb_A 143 KLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVI 197 (346)
T ss_dssp EEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999988765321 123346688889888888874 477665
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-20 Score=142.08 Aligned_cols=143 Identities=21% Similarity=0.218 Sum_probs=100.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+|+||||+|++|++++++|+++ |++|++++|+++....+ ..++.++.+|++++++++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~-------------- 68 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQ-------------- 68 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHT--------------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHc--------------
Confidence 679999999999999999999999 89999999986443322 2344555566665555555544
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--------------------CCcceehhhHHHHHHH
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--------------------SPTTVMSEGMKNIVTA 138 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--------------------~~~~~~~~~~~~ll~~ 138 (189)
++|++|+++|..... ...++|+.++.+++++
T Consensus 69 -----------------------------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 119 (253)
T 1xq6_A 69 -----------------------------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA 119 (253)
T ss_dssp -----------------------------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHH
T ss_pred -----------------------------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHH
Confidence 455666665543210 0135788999999999
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCC--ccchhhHHHHHHHhhhcCCCCC
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMF--HNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~--~~~~~~~~~~~~~l~~~~~~~t 188 (189)
+++.+.++||++||..++...... .++ ..|...|...|.++++.+++|+
T Consensus 120 ~~~~~~~~iv~~SS~~~~~~~~~~-~~~~~~~y~~sK~~~e~~~~~~~i~~~ 170 (253)
T 1xq6_A 120 AKVAGVKHIVVVGSMGGTNPDHPL-NKLGNGNILVWKRKAEQYLADSGTPYT 170 (253)
T ss_dssp HHHHTCSEEEEEEETTTTCTTCGG-GGGGGCCHHHHHHHHHHHHHTSSSCEE
T ss_pred HHHcCCCEEEEEcCccCCCCCCcc-ccccchhHHHHHHHHHHHHHhCCCceE
Confidence 999888999999998764321110 111 2344578899999988888876
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-20 Score=143.98 Aligned_cols=139 Identities=19% Similarity=0.191 Sum_probs=104.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||| +||+|++++++|+++|++|++++|+++... .+++++.+|+++++++.+++++
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~--------------- 62 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP----AGVQTLIADVTRPDTLASIVHL--------------- 62 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC----TTCCEEECCTTCGGGCTTGGGG---------------
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCceEEccCCChHHHHHhhcC---------------
Confidence 57999999 599999999999999999999999876643 6677888888887776665544
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC--CCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN--DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~ 158 (189)
++|+|||+++... .....++|+.++.+++++|++.++++||++||..+++.
T Consensus 63 ---------------------------~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~ 115 (286)
T 3gpi_A 63 ---------------------------RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQ 115 (286)
T ss_dssp ---------------------------CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCC
T ss_pred ---------------------------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcC
Confidence 1566666665432 22345679999999999999999999999999988764
Q ss_pred CCC-------CCCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 159 PSK-------VPPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 159 ~~~-------~p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
... .+.+...|...|...|++ ++. ++|+
T Consensus 116 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~ 150 (286)
T 3gpi_A 116 EVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSST 150 (286)
T ss_dssp CCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEE
T ss_pred CCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeE
Confidence 322 123456678889889888 654 5554
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=143.26 Aligned_cols=143 Identities=11% Similarity=0.112 Sum_probs=97.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++| .++++.+...........++.++.+|+++ +++.++++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~---------------- 62 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLK---------------- 62 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHT----------------
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhc----------------
Confidence 8999999999999999999999999 55555554333322233456666666665 55544444
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++|++||+++..... ...++|+.++.+++++|++.++++||++||.
T Consensus 63 ---------------------------~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~ 115 (313)
T 3ehe_A 63 ---------------------------GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTS 115 (313)
T ss_dssp ---------------------------TCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred ---------------------------CCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCch
Confidence 456666666543211 1134799999999999999999999999999
Q ss_pred eeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 154 FLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
.+++.... ...+...|..+|...|++++. .+++++
T Consensus 116 ~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ 161 (313)
T 3ehe_A 116 TVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQAW 161 (313)
T ss_dssp GGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 88764321 123345678888888888763 466554
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=140.80 Aligned_cols=136 Identities=21% Similarity=0.197 Sum_probs=98.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+||||||++|++++++|+++ |++|++++|++++...+...+++++.+|+++++++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~-------------------- 60 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMV-------------------- 60 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHH--------------------
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHH--------------------
Confidence 57999999999999999999988 999999999987766544455556666665555544
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPS 160 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~ 160 (189)
++++++|++|++++.... ...++.++++++++|++.++++||++||.....
T Consensus 61 -----------------------~~~~~~d~vi~~a~~~~~---~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~--- 111 (289)
T 3e48_A 61 -----------------------EAFKGMDTVVFIPSIIHP---SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQH--- 111 (289)
T ss_dssp -----------------------HHTTTCSEEEECCCCCCS---HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCST---
T ss_pred -----------------------HHHhCCCEEEEeCCCCcc---chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCC---
Confidence 445556777777765432 234688999999999999999999999954321
Q ss_pred CCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 161 KVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
..|.. ........++.+++.+++|++
T Consensus 112 ~~~~~---~~~~~~~~e~~~~~~g~~~~i 137 (289)
T 3e48_A 112 NNPFH---MSPYFGYASRLLSTSGIDYTY 137 (289)
T ss_dssp TCCST---THHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCc---cchhHHHHHHHHHHcCCCEEE
Confidence 12211 223345677888888888864
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.4e-20 Score=145.74 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=97.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCC--c---ccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLP--S---EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~--~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+|+||||+||||++++++|+++ |++|++++|++.... . +...
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~----------------------------- 54 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGD----------------------------- 54 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSS-----------------------------
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccC-----------------------------
Confidence 689999999999999999999998 899999999753211 1 1112
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCccE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVSV 146 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~~ 146 (189)
++..+.+|+.+++.+.++++++|+|||++|.... ....++|+.++.+++++|.+.++ +
T Consensus 55 --------------~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~ 119 (348)
T 1oc2_A 55 --------------RVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-R 119 (348)
T ss_dssp --------------SEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-E
T ss_pred --------------CeEEEECCCCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-e
Confidence 3444555555555555566666777777775431 11245789999999999999887 9
Q ss_pred EEEeccceeecCCCC-------------------CCCCCccchhhHHHHHHHhhh
Q psy3626 147 VSVCLSAFLFYEPSK-------------------VPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~-------------------~p~~~~~~~~~~~~~~~~l~~ 182 (189)
||++||..+++.... .+.+...|..+|...|++++.
T Consensus 120 ~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 174 (348)
T 1oc2_A 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKA 174 (348)
T ss_dssp EEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred EEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 999999877643210 123345678888888887763
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.4e-20 Score=143.71 Aligned_cols=142 Identities=13% Similarity=0.075 Sum_probs=105.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|+++........+++++.+|+.+++ +.++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~----------------- 62 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIK----------------- 62 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCC-----------------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcC-----------------
Confidence 58999999999999999999999999999999877665544556677777777765 444333
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
+ |++||+++..... ...++|+.++.+++++|++.++++||++||..
T Consensus 63 --------------------------~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 115 (312)
T 3ko8_A 63 --------------------------G-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 115 (312)
T ss_dssp --------------------------C-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG
T ss_pred --------------------------C-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHH
Confidence 3 6666666643211 11347899999999999999999999999998
Q ss_pred eecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 155 LFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 155 ~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+++.... .+.+...|..+|...|++++. .+++++
T Consensus 116 vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~ 160 (312)
T 3ko8_A 116 VYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCL 160 (312)
T ss_dssp GGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 8765332 123456788889888887763 366554
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.9e-20 Score=148.05 Aligned_cols=140 Identities=14% Similarity=0.057 Sum_probs=100.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+|+||||+||||++++++|+++|++|++++|++.....+. ..++.++.+|+++++++.+++++.
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---------- 79 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---------- 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH----------
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc----------
Confidence 68999999999999999999999999999999876554321 234555555555555554444331
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCC-ccEEE
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYN-VSVVS 148 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~-~~~~i 148 (189)
++|+|||++|..... ...++|+.++.+++++|.+.+ +++||
T Consensus 80 -------------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v 128 (357)
T 1rkx_A 80 -------------------------------QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 128 (357)
T ss_dssp -------------------------------CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEE
T ss_pred -------------------------------CCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 267788887743211 123578999999999999876 88999
Q ss_pred EeccceeecCCCC--------CCCCCccchhhHHHHHHHhhh
Q psy3626 149 VCLSAFLFYEPSK--------VPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 149 ~iSS~~~~~~~~~--------~p~~~~~~~~~~~~~~~~l~~ 182 (189)
++||..+++.... .+.+...|..+|...|++++.
T Consensus 129 ~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 170 (357)
T 1rkx_A 129 NITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSS 170 (357)
T ss_dssp EECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHH
T ss_pred EecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 9999987754321 123455678888888887763
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.3e-20 Score=145.23 Aligned_cols=143 Identities=15% Similarity=0.110 Sum_probs=105.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|++.. .. .++.++.+|+++++++++++++.
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~~~-------------- 73 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVISDI-------------- 73 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHHHH--------------
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHHhc--------------
Confidence 5799999999999999999999999999999998765 22 16777888888887777666541
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHC-CccEEEEecc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEY-NVSVVSVCLS 152 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~-~~~~~i~iSS 152 (189)
++|+|||++|..... ...++|+.++.+++++|++. +.++||++||
T Consensus 74 ---------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 126 (321)
T 2pk3_A 74 ---------------------------KPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGS 126 (321)
T ss_dssp ---------------------------CCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred ---------------------------CCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence 256677776654311 12457899999999999875 5899999999
Q ss_pred ceeecCC--CC-------CCCCCccchhhHHHHHHHhhhc----CCCCC
Q psy3626 153 AFLFYEP--SK-------VPPMFHNVNDDHQRMYNVLKDS----GLNYI 188 (189)
Q Consensus 153 ~~~~~~~--~~-------~p~~~~~~~~~~~~~~~~l~~~----~~~~t 188 (189)
..+++.. .. .+.+...|..+|...|++++.. +++++
T Consensus 127 ~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 175 (321)
T 2pk3_A 127 SEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDII 175 (321)
T ss_dssp GGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcCCCEE
Confidence 9877542 11 1234567888899998888743 66554
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.1e-20 Score=146.31 Aligned_cols=156 Identities=20% Similarity=0.181 Sum_probs=108.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|++...... .+.+.+.+..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------~~~~~~~~~~--------------- 77 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRN--------------LDEVRSLVSE--------------- 77 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHH--------------HHHHHHHSCH---------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhh--------------HHHHhhhccc---------------
Confidence 67999999999999999999999999999999975432110 0001000000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
....++..+.+|+.+.+.+.+++.++|+|||++|..... ...++|+.++.+++++|++.++++||++||.
T Consensus 78 ---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~ 154 (352)
T 1sb8_A 78 ---KQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASS 154 (352)
T ss_dssp ---HHHTTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred ---ccCCceEEEECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH
Confidence 001245666677777777777777788888888764311 1235789999999999999999999999999
Q ss_pred eeecCCCCC-------CCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSKV-------PPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~~-------p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.++...+.. +.+...|..+|...|++++ +.+++|+
T Consensus 155 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ 200 (352)
T 1sb8_A 155 STYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTI 200 (352)
T ss_dssp GGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred HhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 887643221 1234567788888888875 3366665
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=141.52 Aligned_cols=146 Identities=19% Similarity=0.200 Sum_probs=104.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+|+||||+||||++++++|+++|++|++++|++........ .++.++.+|++++++++++++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~------------- 87 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF------------- 87 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH-------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc-------------
Confidence 689999999999999999999999999999997554321101 34555555555555544444310
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----cceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----TTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
++|+|||++|....... .++|+.++.+++++|.+.++++||++||..+
T Consensus 88 ----------------------------~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~ 139 (330)
T 2pzm_A 88 ----------------------------KPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALC 139 (330)
T ss_dssp ----------------------------CCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGG
T ss_pred ----------------------------CCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHH
Confidence 56778888775432100 4578999999999999988899999999988
Q ss_pred ecCCCCC--C-----CCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 156 FYEPSKV--P-----PMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 156 ~~~~~~~--p-----~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
+...... | .+...|..+|...|++++..+++++
T Consensus 140 ~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~~~~~~ 179 (330)
T 2pzm_A 140 YGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVV 179 (330)
T ss_dssp GCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTCSSCEE
T ss_pred hCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHcCCCEE
Confidence 7543221 2 1455688889999998887666654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=7.8e-20 Score=145.52 Aligned_cols=147 Identities=13% Similarity=0.076 Sum_probs=102.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-----c-cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-----E-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-----~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|+||||+||||++++++|+++|++|++++|+++.... + ...++.++.+|++++++++++++++
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-------- 85 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-------- 85 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH--------
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc--------
Confidence 5799999999999999999999999999999998754321 0 1123445555555555544444321
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCc-cE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNV-SV 146 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~-~~ 146 (189)
++|+|||++|..... ...++|+.++.+++++|++.++ ++
T Consensus 86 ---------------------------------~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~ 132 (335)
T 1rpn_A 86 ---------------------------------QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 132 (335)
T ss_dssp ---------------------------------CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSE
T ss_pred ---------------------------------CCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 357788887754321 1235789999999999999886 89
Q ss_pred EEEeccceeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 147 VSVCLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
||++||..+++.... .+.+...|..+|...|.+++. .+++|+
T Consensus 133 ~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 185 (335)
T 1rpn_A 133 FYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHAS 185 (335)
T ss_dssp EEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHcCCcEE
Confidence 999999887754322 123345678889888888763 366664
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.7e-20 Score=147.65 Aligned_cols=145 Identities=10% Similarity=-0.017 Sum_probs=98.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCc-cc-CCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPS-EY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~-~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+|+||||+||||++++++|+++| ++|++++|++..... +. ..+++++.+|++++++
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~------------------- 92 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDAL------------------- 92 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHH-------------------
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHH-------------------
Confidence 5789999999999999999999999 999999998654321 11 2344555555555544
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHC-CccEEEE
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEY-NVSVVSV 149 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~-~~~~~i~ 149 (189)
+.++++++|+|||+++..... ...++|+.++.+++++|++. ++++||+
T Consensus 93 ------------------------l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~ 148 (377)
T 2q1s_A 93 ------------------------LASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVY 148 (377)
T ss_dssp ------------------------HHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEE
T ss_pred ------------------------HHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 444455567777777654321 12357899999999999998 8999999
Q ss_pred eccceeecCCCC--------C---C--CCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 150 CLSAFLFYEPSK--------V---P--PMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 150 iSS~~~~~~~~~--------~---p--~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+||..+++.... . | .+..+|...|...|++++. .+++|+
T Consensus 149 ~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 204 (377)
T 2q1s_A 149 SAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTV 204 (377)
T ss_dssp EEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred eCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHhCCCEE
Confidence 999887653211 1 1 3345678888888888763 366654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=140.56 Aligned_cols=142 Identities=12% Similarity=0.017 Sum_probs=101.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+|+||++++++|+++|++|++++|++.... ..++.++.+|+++++++.+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~------------------- 59 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHD------------------- 59 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHH-------------------
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHH-------------------
Confidence 468999999999999999999999999999999875422 1344555566665555444
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---CcceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
.++++|++||++|...... ..++|+.++.++++++++.++++||++||..++.
T Consensus 60 ------------------------~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~ 115 (267)
T 3ay3_A 60 ------------------------LVKDCDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIG 115 (267)
T ss_dssp ------------------------HHTTCSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGST
T ss_pred ------------------------HHcCCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhC
Confidence 4445577777776542211 1347899999999999999999999999998775
Q ss_pred CCCC--------CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 158 EPSK--------VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 158 ~~~~--------~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
..+. .+.+...|..+|...|.+++ +.+++|+
T Consensus 116 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ 158 (267)
T 3ay3_A 116 YYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETL 158 (267)
T ss_dssp TSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 4221 11234567788888887775 3466665
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-19 Score=143.00 Aligned_cols=140 Identities=12% Similarity=0.101 Sum_probs=101.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+||||+||||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-------- 77 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH-------- 77 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS--------
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc--------
Confidence 58999999999999999999999999999999876554321 224445555555555544444311
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVV 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~ 147 (189)
++|++||++|..... ...+.|+.++.+++++|++.++++|
T Consensus 78 ---------------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i 124 (341)
T 3enk_A 78 ---------------------------------PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRI 124 (341)
T ss_dssp ---------------------------------CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ---------------------------------CCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 567788887754321 1235789999999999999999999
Q ss_pred EEeccceeecCCCCC-------CCCCccchhhHHHHHHHhhh
Q psy3626 148 SVCLSAFLFYEPSKV-------PPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 148 i~iSS~~~~~~~~~~-------p~~~~~~~~~~~~~~~~l~~ 182 (189)
|++||..+++..... ..+...|..+|...|++++.
T Consensus 125 v~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~ 166 (341)
T 3enk_A 125 VFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRD 166 (341)
T ss_dssp EEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHH
T ss_pred EEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Confidence 999998887543221 23345688889888888763
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=146.20 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=100.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|+++......-.. +......
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-------------l~~~~~~---------------- 75 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH-------------LYKNPQA---------------- 75 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGG-------------GC---------------------
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHH-------------Hhhhhcc----------------
Confidence 78999999999999999999999999999999865421000000 0000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCc---cEEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNV---SVVSV 149 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~---~~~i~ 149 (189)
....++..+.+|+.+.+.+.+++.+ +|+|||++|..... ...++|+.++.++++++.+.++ ++||+
T Consensus 76 --~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~ 153 (375)
T 1t2a_A 76 --HIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQ 153 (375)
T ss_dssp ------CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEE
T ss_pred --ccCCCceEEEccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEE
Confidence 0011334444455555444444443 58888888764321 1235789999999999999887 89999
Q ss_pred eccceeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 150 CLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 150 iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+||..++..... .+.+...|..+|...|.+++. .+++++
T Consensus 154 ~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 203 (375)
T 1t2a_A 154 ASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 203 (375)
T ss_dssp EEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred ecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEE
Confidence 999988764321 123345678888888887763 255543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=141.41 Aligned_cols=132 Identities=22% Similarity=0.317 Sum_probs=95.8
Q ss_pred eEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+||||+||+|++++++|+++ |++|++++|+++....+...+++++.+|+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~----------------------- 57 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEA----------------------- 57 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHH-----------------------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHH-----------------------
Confidence 5899999999999999999998 999999999876544322234445555555544
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPS 160 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~ 160 (189)
.+.++++++|++||+++... ..++.++++++++|++.++++||++||..++.
T Consensus 58 --------------------~~~~~~~~~d~vi~~a~~~~-----~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--- 109 (286)
T 2zcu_A 58 --------------------ALTSALQGVEKLLLISSSEV-----GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--- 109 (286)
T ss_dssp --------------------HHHHHTTTCSEEEECC-------------CHHHHHHHHHHHHTCCEEEEEEETTTTT---
T ss_pred --------------------HHHHHHhCCCEEEEeCCCCc-----hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC---
Confidence 45555555677777776431 13688999999999999999999999987652
Q ss_pred CCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 161 KVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
.| .+|..+|...|+++++.+++|++
T Consensus 110 -~~---~~y~~sK~~~e~~~~~~~~~~~i 134 (286)
T 2zcu_A 110 -SP---LGLADEHIETEKMLADSGIVYTL 134 (286)
T ss_dssp -CC---STTHHHHHHHHHHHHHHCSEEEE
T ss_pred -Cc---chhHHHHHHHHHHHHHcCCCeEE
Confidence 11 25788899999999888888763
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.7e-19 Score=141.83 Aligned_cols=153 Identities=12% Similarity=0.004 Sum_probs=103.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHH--cCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALK--QGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~--~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+|+||||+||||++++++|++ +|++|++++|++......... . ..+....
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~----~~~~~~~--------------------- 63 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNR-P----SSLGHFK--------------------- 63 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC--------C----CCCCCGG---------------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccc-h----hhhhhhh---------------------
Confidence 36899999999999999999999 899999999976521100000 0 0000000
Q ss_pred CCCCccccCceeEEeccccCHHHHHHH-hcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
......+..+.+|+.+++.+.++ ..++|+|||++|..... ...++|+.++.++++++++.+++ ||++||
T Consensus 64 ----~~~~~~~~~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 64 ----NLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp ----GGTTCCSEEEECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred ----hccccCceEEECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 00012445666666666666666 66788999998854421 12458999999999999999876 999999
Q ss_pred ceeecCCCC------CCCCCccchhhHHHHHHHhhhcC
Q psy3626 153 AFLFYEPSK------VPPMFHNVNDDHQRMYNVLKDSG 184 (189)
Q Consensus 153 ~~~~~~~~~------~p~~~~~~~~~~~~~~~~l~~~~ 184 (189)
..+++.... .+.+..+|..+|...|++++...
T Consensus 139 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~ 176 (362)
T 3sxp_A 139 AGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHS 176 (362)
T ss_dssp GGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHh
Confidence 887764332 12334568889999999888554
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=144.59 Aligned_cols=145 Identities=19% Similarity=0.229 Sum_probs=99.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-----cc-CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-----EY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-----~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|+||||+||||++++++|+++|++|++++|....... +. ..++.++.+|+++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d------------------- 61 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN------------------- 61 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-------------------
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCC-------------------
Confidence 8999999999999999999999999999999985321110 00 1224444445544
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCcc
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVS 145 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~ 145 (189)
++.+.+++++ +|+|||++|..... ...++|+.++.+++++|++.+++
T Consensus 62 ------------------------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~ 117 (347)
T 1orr_A 62 ------------------------KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN 117 (347)
T ss_dssp ------------------------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ------------------------HHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4444444444 67777777754321 12457999999999999998875
Q ss_pred -EEEEeccceeecCCCC-----------------------CCCCCccchhhHHHHHHHhhhc----CCCCC
Q psy3626 146 -VVSVCLSAFLFYEPSK-----------------------VPPMFHNVNDDHQRMYNVLKDS----GLNYI 188 (189)
Q Consensus 146 -~~i~iSS~~~~~~~~~-----------------------~p~~~~~~~~~~~~~~~~l~~~----~~~~t 188 (189)
+||++||..+++.... .+.+...|..+|...|++++.. +++++
T Consensus 118 ~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 188 (347)
T 1orr_A 118 CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTV 188 (347)
T ss_dssp CEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred ceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 9999999887653221 1123456778888888887642 55554
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=141.91 Aligned_cols=146 Identities=18% Similarity=0.216 Sum_probs=101.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|...........++.++.+|++++++++++++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------------- 65 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREF--------------- 65 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhc---------------
Confidence 48999999999999999999999999999998543222111234566677777766666555410
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCccEEEEeccc-
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA- 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~- 153 (189)
++|+++|+++.... ....++|+.++.+++++|++.++++||++||.
T Consensus 66 --------------------------~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~ 119 (311)
T 2p5y_A 66 --------------------------RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGG 119 (311)
T ss_dssp --------------------------CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHH
T ss_pred --------------------------CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCh
Confidence 45666666664321 11235789999999999999999999999998
Q ss_pred eeecC-CCCC-------CCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYE-PSKV-------PPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~-~~~~-------p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
..++. .... +.+...|..+|...|.+++ +.+++|+
T Consensus 120 ~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 166 (311)
T 2p5y_A 120 AIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWV 166 (311)
T ss_dssp HHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred hhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 54432 1111 1244568888988888876 3466664
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.4e-19 Score=142.09 Aligned_cols=154 Identities=16% Similarity=0.117 Sum_probs=98.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC--cccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP--SEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+|+||||+||||++++++|+++|++|++++|+++... .+.. ..+..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~------------------~~~~~------------ 50 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDH------------------IYQDP------------ 50 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------------------------------
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHH------------------Hhhcc------------
Confidence 899999999999999999999999999999999865321 1000 00000
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCCC-------CcceehhhHHHHHHHHHHCCc---cE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDLS-------PTTVMSEGMKNIVTAMKEYNV---SV 146 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~~---~~ 146 (189)
.....++..+.+|+.+.+.+.+.+.+ +|++||++|...... ..++|+.++.++++++.+.++ ++
T Consensus 51 ----~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 126 (372)
T 1db3_A 51 ----HTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTR 126 (372)
T ss_dssp --------CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCE
T ss_pred ----ccCCCceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcE
Confidence 00011334444444444444444443 588888887643221 124788999999999999887 89
Q ss_pred EEEeccceeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 147 VSVCLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
||++||..+++.... .+.+...|..+|...|.+++. .+++++
T Consensus 127 iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 179 (372)
T 1db3_A 127 FYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC 179 (372)
T ss_dssp EEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 999999887754321 123355688888888887763 356554
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=142.84 Aligned_cols=142 Identities=15% Similarity=0.182 Sum_probs=100.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCC--cccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLP--SEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+|+||||||++|++++++|+++| ++|++++|++++.. .+...+++++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~----------------------------- 56 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVV----------------------------- 56 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEE-----------------------------
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEE-----------------------------
Confidence 689999999999999999999998 99999999875431 1111234444
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~ 158 (189)
.+|+.+++.+.++++++|++|++++..... ..+.++.++++++++|++.++++||++|+...+..
T Consensus 57 --------------~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~-~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~ 121 (299)
T 2wm3_A 57 --------------QGDQDDQVIMELALNGAYATFIVTNYWESC-SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL 121 (299)
T ss_dssp --------------ECCTTCHHHHHHHHTTCSEEEECCCHHHHT-CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHH
T ss_pred --------------EecCCCHHHHHHHHhcCCEEEEeCCCCccc-cchHHHHHHHHHHHHHHHcCCCEEEEEcCcccccc
Confidence 445555555555555667777777642211 12346778999999999999999999776655432
Q ss_pred CCCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 159 PSKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
... ....+|+..|...|+++++++++|++
T Consensus 122 ~~~--~~~~~y~~sK~~~e~~~~~~gi~~~i 150 (299)
T 2wm3_A 122 TAG--RLAAAHFDGKGEVEEYFRDIGVPMTS 150 (299)
T ss_dssp TTT--SCCCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCC--cccCchhhHHHHHHHHHHHCCCCEEE
Confidence 211 12345778899999999998998874
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-19 Score=142.27 Aligned_cols=143 Identities=21% Similarity=0.200 Sum_probs=103.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||||++|+++++.|+++|++|++++|+++..... ...+.. +.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--------------~~~~~~-l~----------------- 58 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSK--------------AKIFKA-LE----------------- 58 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH--------------HHHHHH-HH-----------------
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhH--------------HHHHHH-HH-----------------
Confidence 6899999999999999999999999999999986332110 000000 00
Q ss_pred CccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCC-ccEEEEeccceeecC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAFLFYE 158 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~~~~~ 158 (189)
...+.++.+|+.|.+.+.++++ ++|+|||+++.. |+.++.+++++|++.+ +++||+ |+-+...+
T Consensus 59 ----~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~--------n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~ 125 (346)
T 3i6i_A 59 ----DKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGE--------SILDQIALVKAMKAVGTIKRFLP-SEFGHDVN 125 (346)
T ss_dssp ----HTTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGG--------GGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTT
T ss_pred ----hCCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchh--------hHHHHHHHHHHHHHcCCceEEee-cccCCCCC
Confidence 1145566666666666677777 788999998763 7889999999999998 999986 43222112
Q ss_pred CCCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 159 PSKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
......+...|...|..+|+++++.+++||+
T Consensus 126 e~~~~~p~~~y~~sK~~~e~~l~~~g~~~ti 156 (346)
T 3i6i_A 126 RADPVEPGLNMYREKRRVRQLVEESGIPFTY 156 (346)
T ss_dssp TCCCCTTHHHHHHHHHHHHHHHHHTTCCBEE
T ss_pred ccCcCCCcchHHHHHHHHHHHHHHcCCCEEE
Confidence 1222244567888999999999999999874
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=142.64 Aligned_cols=144 Identities=11% Similarity=-0.015 Sum_probs=102.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+|+||||+||||++++++|+++ |++|++++|++.... ...+++++.+|++++++++++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~------------- 67 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VVNSGPFEVVNALDFNQIEHLVEVH------------- 67 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HHHSSCEEECCTTCHHHHHHHHHHT-------------
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--ccCCCceEEecCCCHHHHHHHHhhc-------------
Confidence 68999999999999999999999 899999999865422 1124556666666666655555411
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC------CCCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++|+|||+++.... ....++|+.++.+++++|++.++++||++||.
T Consensus 68 ----------------------------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 119 (312)
T 2yy7_A 68 ----------------------------KITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSI 119 (312)
T ss_dssp ----------------------------TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEG
T ss_pred ----------------------------CCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH
Confidence 45667777664321 11245789999999999999999999999999
Q ss_pred eeecCCCC--------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 154 FLFYEPSK--------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~--------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
.++..... .+.+..+|..+|...|++++. .+++|+
T Consensus 120 ~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 166 (312)
T 2yy7_A 120 AVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVR 166 (312)
T ss_dssp GGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhcCCcEE
Confidence 88764221 112345678888888887753 356654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-19 Score=140.21 Aligned_cols=137 Identities=13% Similarity=0.145 Sum_probs=85.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|+++. .+ ++.+|+++++++.+++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~--------------- 59 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDF--------------- 59 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---------------
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhh---------------
Confidence 689999999999999999999999999999987543 12 6778888887777666541
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+|||++|.... ....++|+.++.++++++.+.+. +||++||..
T Consensus 60 --------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~ 112 (315)
T 2ydy_A 60 --------------------------QPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDY 112 (315)
T ss_dssp --------------------------CCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGG
T ss_pred --------------------------CCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHH
Confidence 24556666554321 12356799999999999999886 999999998
Q ss_pred eecCCC------CCCCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 155 LFYEPS------KVPPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 155 ~~~~~~------~~p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
++.... ..+.+...|..+|...|++++..+.+|+
T Consensus 113 v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~ 152 (315)
T 2ydy_A 113 VFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAA 152 (315)
T ss_dssp GSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCE
T ss_pred HcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeE
Confidence 875410 1123355688889999999987777664
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-19 Score=141.70 Aligned_cols=119 Identities=20% Similarity=0.226 Sum_probs=80.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+|+||||+||||++++++|+++|++|+++.|+++...... .+.. +..
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~---------------~~~~-~~~--------------- 57 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS---------------HLLE-LQE--------------- 57 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH---------------HHHH-HGG---------------
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH---------------HHHh-cCC---------------
Confidence 368999999999999999999999999999999765432110 0000 000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------CCcceehhhHHHHHHHHHHCC-ccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------SPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~ 153 (189)
..++..+.+|+.+++.+.+++.++|+|||+++..... ...++|+.++.+++++|.+.+ ++|||++||.
T Consensus 58 -----~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~ 132 (338)
T 2rh8_A 58 -----LGDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA 132 (338)
T ss_dssp -----GSCEEEEECCTTTSSSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred -----CCcEEEEecCCCChHHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence 0123344445544444555555667777776643211 135679999999999999985 8999999998
Q ss_pred ee
Q psy3626 154 FL 155 (189)
Q Consensus 154 ~~ 155 (189)
.+
T Consensus 133 ~~ 134 (338)
T 2rh8_A 133 AA 134 (338)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-19 Score=141.47 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=95.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc------cc--CCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS------EY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~------~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
||+|+||||+||||++++++|+++|++|+++.|+++.... +. ..+++++.+|+++++
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~--------------- 69 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEG--------------- 69 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTT---------------
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHH---------------
Confidence 4789999999999999999999999999999998653211 00 013444455555544
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------CCcceehhhHHHHHHHHHHCC-cc
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------SPTTVMSEGMKNIVTAMKEYN-VS 145 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~~~~~~~~~~~~ll~~~~~~~-~~ 145 (189)
.+.++++++|+|||+++..... ...++|+.++.+++++|.+.+ ++
T Consensus 70 ----------------------------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~ 121 (337)
T 2c29_D 70 ----------------------------SFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVR 121 (337)
T ss_dssp ----------------------------TTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCC
T ss_pred ----------------------------HHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 4445555566777776643211 123578999999999999877 89
Q ss_pred EEEEeccceeecCCCC-CC-----------------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 146 VVSVCLSAFLFYEPSK-VP-----------------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~-~p-----------------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
+||++||..+++..+. .+ .+...|..+|...|.++. +.+++++
T Consensus 122 riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 186 (337)
T 2c29_D 122 RLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFI 186 (337)
T ss_dssp EEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 9999999875432111 00 012246777877777654 3466654
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=134.70 Aligned_cols=149 Identities=15% Similarity=0.106 Sum_probs=102.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||||++|+++++.|+++|++|++++|+++..... ....++. +.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~-~~---------------- 53 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNID-------------KVQMLLY-FK---------------- 53 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHH-------------HHHHHHH-HH----------------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchh-------------HHHHHHH-HH----------------
Confidence 57899999999999999999999999999999986532100 0000000 11
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCC-ccEEEEeccceeecCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAFLFYEP 159 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~~~~~~ 159 (189)
...+.++.+|+.+++.+.++++++|++|++++.... ..++.++++++++|++.+ ++|||+ |+.....+.
T Consensus 54 -----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~----~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~ 123 (313)
T 1qyd_A 54 -----QLGAKLIEASLDDHQRLVDALKQVDVVISALAGGVL----SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDI 123 (313)
T ss_dssp -----TTTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSS----STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTS
T ss_pred -----hCCeEEEeCCCCCHHHHHHHHhCCCEEEECCccccc----hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccc
Confidence 114556667777777777777788889998886532 136788999999999998 999985 432211111
Q ss_pred CCCC-CCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 160 SKVP-PMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 160 ~~~p-~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
...+ .+...++..|...|+++++.+++||+
T Consensus 124 ~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~i 154 (313)
T 1qyd_A 124 MEHALQPGSITFIDKRKVRRAIEAASIPYTY 154 (313)
T ss_dssp CCCCCSSTTHHHHHHHHHHHHHHHTTCCBCE
T ss_pred cccCCCCCcchHHHHHHHHHHHHhcCCCeEE
Confidence 0011 12123448899999999999999974
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=136.92 Aligned_cols=148 Identities=13% Similarity=0.085 Sum_probs=103.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc---C---CcEEEEecCCCCC--CcccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ---G---LEVCTLLRDPQRL--PSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~---g---~~v~~~~r~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+|+||||+||||++++++|+++ | ++|++++|.+... ..+.. ...
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~------------------~~~--------- 53 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAP------------------VDA--------- 53 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGG------------------GTT---------
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhh------------------ccc---------
Confidence 48999999999999999999996 8 9999999975321 11100 000
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSV 146 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~ 146 (189)
..++..+.+|+.+++.+.+++.++|+|||++|..... ...++|+.++.+++++|.+.++++
T Consensus 54 ------------~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~ 121 (337)
T 1r6d_A 54 ------------DPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121 (337)
T ss_dssp ------------CTTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCE
T ss_pred ------------CCCeEEEEcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 1144555666666666666666778888888754311 124578999999999999999999
Q ss_pred EEEeccceeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 147 VSVCLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
||++||..+++.... .+.+...|..+|...|++++. .+++++
T Consensus 122 ~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ 174 (337)
T 1r6d_A 122 VVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVR 174 (337)
T ss_dssp EEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHCCCEE
Confidence 999999887654211 123455678888888887753 366654
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5e-19 Score=143.41 Aligned_cols=139 Identities=17% Similarity=0.119 Sum_probs=97.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-----Cccc------CC-ceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-----PSEY------HS-KVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-----~~~~------~~-~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|+|+||||+||||++++++|+++|++|++++|+++.. ..+. .. ++.++.+|+++++++.++++++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 6899999999999999999999999999999987542 1110 01 3445555555555544444321
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHC
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~ 142 (189)
++|+|||++|..... ...++|+.++.+++++|.+.
T Consensus 106 --------------------------------------~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~ 147 (381)
T 1n7h_A 106 --------------------------------------KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 147 (381)
T ss_dssp --------------------------------------CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred --------------------------------------CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 257788887754321 12357899999999999987
Q ss_pred Ccc-----EEEEeccceeecCCCC------CCCCCccchhhHHHHHHHhh
Q psy3626 143 NVS-----VVSVCLSAFLFYEPSK------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~-----~~i~iSS~~~~~~~~~------~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++ +||++||..+++.... .+.+...|..+|...|.+++
T Consensus 148 ~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 197 (381)
T 1n7h_A 148 TIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTV 197 (381)
T ss_dssp HHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred CCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Confidence 765 9999999987754211 12335567888888888776
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=138.99 Aligned_cols=143 Identities=15% Similarity=0.136 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcc-cCCceeEEeccccCh-hHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKL-ADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+|+||||+||||++++++|+++ |++|++++|+++....+ ...+++++.+|++++ +.++++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-------------- 66 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-------------- 66 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH--------------
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc--------------
Confidence 58999999999999999999998 89999999987654432 123566666666653 34444444
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
++|+|||++|..... ...++|+.++.+++++|++.+ ++||++|
T Consensus 67 -----------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~S 116 (345)
T 2bll_A 67 -----------------------------KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPS 116 (345)
T ss_dssp -----------------------------HCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEEC
T ss_pred -----------------------------CCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEe
Confidence 456666666543211 113468899999999999988 8999999
Q ss_pred cceeecCCCCCC--------------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 152 SAFLFYEPSKVP--------------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 152 S~~~~~~~~~~p--------------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
|..+++.....+ .+...|..+|...|++++ +.+++|+
T Consensus 117 S~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 171 (345)
T 2bll_A 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFT 171 (345)
T ss_dssp CGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred cHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEE
Confidence 988775432211 112257778888888875 3466665
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-19 Score=145.83 Aligned_cols=158 Identities=14% Similarity=0.123 Sum_probs=99.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-cC-CceeEEeccccC-hhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-YH-SKVEIIQGDVLK-LADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-~~-~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|++|+||||+||||++++++|+++|++|++++|........ .. ..+. .+.+ .+.+.......
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~----------- 75 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLT----PIASIHDRISRWKALT----------- 75 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSS----CCCCHHHHHHHHHHHH-----------
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccc----ccchhhhhhhhHhhcc-----------
Confidence 67999999999999999999999999999998753211000 00 0000 0000 00111100000
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCC----C------CcceehhhHHHHHHHHHHCCc-
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDL----S------PTTVMSEGMKNIVTAMKEYNV- 144 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~----~------~~~~~~~~~~~ll~~~~~~~~- 144 (189)
..++..+.+|+.+.+.+.+++.+ +|+|||++|..... . ..++|+.++.+++++|++.+.
T Consensus 76 --------~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~ 147 (404)
T 1i24_A 76 --------GKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE 147 (404)
T ss_dssp --------CCCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred --------CCceEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCC
Confidence 11455566666666666666665 78888888764321 1 235789999999999999887
Q ss_pred cEEEEeccceeecCCCC--------------------CCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSK--------------------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~--------------------~p~~~~~~~~~~~~~~~~l~ 181 (189)
++||++||..+++.... .+.+...|..+|...|++++
T Consensus 148 ~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~ 204 (404)
T 1i24_A 148 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIA 204 (404)
T ss_dssp CEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHH
T ss_pred cEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHH
Confidence 59999999887653210 12234567778888888765
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-19 Score=133.32 Aligned_cols=133 Identities=18% Similarity=0.101 Sum_probs=104.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+|+||||+|++|++++++|+++|+ +|++++|+++. ...+++++.+|+++++++++++
T Consensus 6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~---------------- 65 (215)
T 2a35_A 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS---------------- 65 (215)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC----------------
T ss_pred ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh----------------
Confidence 5899999999999999999999998 99999998765 1256777778887776554433
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-----CCCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-----LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-----~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
+|++|+++|.... ....++|+.++.++++++++.+++++|++||..
T Consensus 66 -----------------------------~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 116 (215)
T 2a35_A 66 -----------------------------IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALG 116 (215)
T ss_dssp -----------------------------CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred -----------------------------hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcc
Confidence 4667777665331 112357889999999999999999999999988
Q ss_pred eecCCCCCCCCCccchhhHHHHHHHhhhcCCC-CCC
Q psy3626 155 LFYEPSKVPPMFHNVNDDHQRMYNVLKDSGLN-YIA 189 (189)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~-~t~ 189 (189)
++.. +..+|...|...|+++++.+++ |++
T Consensus 117 ~~~~------~~~~y~~sK~~~e~~~~~~~~~~~~~ 146 (215)
T 2a35_A 117 ADAK------SSIFYNRVKGELEQALQEQGWPQLTI 146 (215)
T ss_dssp CCTT------CSSHHHHHHHHHHHHHTTSCCSEEEE
T ss_pred cCCC------CccHHHHHHHHHHHHHHHcCCCeEEE
Confidence 7642 2346888999999999988887 763
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=136.83 Aligned_cols=146 Identities=21% Similarity=0.248 Sum_probs=98.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||||++|+++++.|+++|++|++++|+++..... . ....++ .+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~--~----------~~~~~~-~l~---------------- 54 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNS--E----------KAQLLE-SFK---------------- 54 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTH--H----------HHHHHH-HHH----------------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCH--H----------HHHHHH-HHH----------------
Confidence 57899999999999999999999999999999986533000 0 000000 011
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCC-ccEEEEeccceeecCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAFLFYEP 159 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~~~~~~ 159 (189)
...+.++.+|+.+++.+.++++++|+||++++.. .+.++++++++|++.+ ++|||+ |+.+...+.
T Consensus 55 -----~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~--------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~ 120 (308)
T 1qyc_A 55 -----ASGANIVHGSIDDHASLVEAVKNVDVVISTVGSL--------QIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDN 120 (308)
T ss_dssp -----TTTCEEECCCTTCHHHHHHHHHTCSEEEECCCGG--------GSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTS
T ss_pred -----hCCCEEEEeccCCHHHHHHHHcCCCEEEECCcch--------hhhhHHHHHHHHHhcCCCceEee-cccccCccc
Confidence 1145566667777777777777788899988753 2567899999999998 999984 433212111
Q ss_pred CCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 160 SKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 160 ~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
.....+....+..|...++++++.+++||+
T Consensus 121 ~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~ 150 (308)
T 1qyc_A 121 VHAVEPAKSVFEVKAKVRRAIEAEGIPYTY 150 (308)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHTCCBEE
T ss_pred cccCCcchhHHHHHHHHHHHHHhcCCCeEE
Confidence 111112122347889999999988998873
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=136.16 Aligned_cols=134 Identities=10% Similarity=0.043 Sum_probs=101.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+|||+ ||+|++++++|+++|++|++++|+++....+...+++++.+|+.+.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~------------------------ 59 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEP------------------------ 59 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCC------------------------
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEeccccc------------------------
Confidence 579999998 9999999999999999999999987654433334555666665542
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHH--CCccEEEEeccceeecC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKE--YNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~~~~~i~iSS~~~~~~ 158 (189)
+ +.++|+|||+++..... ...++++++++++ .++++||++||..+++.
T Consensus 60 -------------------~-----~~~~d~vi~~a~~~~~~------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~ 109 (286)
T 3ius_A 60 -------------------S-----LDGVTHLLISTAPDSGG------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGD 109 (286)
T ss_dssp -------------------C-----CTTCCEEEECCCCBTTB------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCC
T ss_pred -------------------c-----cCCCCEEEECCCccccc------cHHHHHHHHHHHhhcCCceEEEEeecceecCC
Confidence 1 34678899988865432 3347899999998 67899999999988764
Q ss_pred CCC-------CCCCCccchhhHHHHHHHhhhc-CCCCCC
Q psy3626 159 PSK-------VPPMFHNVNDDHQRMYNVLKDS-GLNYIA 189 (189)
Q Consensus 159 ~~~-------~p~~~~~~~~~~~~~~~~l~~~-~~~~t~ 189 (189)
... .+.+..+|...|...|+++++. +++|++
T Consensus 110 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~i 148 (286)
T 3ius_A 110 HDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHV 148 (286)
T ss_dssp CTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred CCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEE
Confidence 332 2234456888999999999987 777753
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=138.12 Aligned_cols=139 Identities=18% Similarity=0.110 Sum_probs=99.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc--c----cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS--E----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~--~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+|+||||+||||++++++|+++|++|++++|+++.... + ...++.++.+|+++++++.++++++
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--------- 74 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV--------- 74 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc---------
Confidence 689999999999999999999999999999998765421 0 0123455555555555554444332
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCc-cEE
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNV-SVV 147 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~-~~~ 147 (189)
++|++||++|..... ...++|+.++.+++++|.+.++ ++|
T Consensus 75 --------------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~i 122 (345)
T 2z1m_A 75 --------------------------------QPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKF 122 (345)
T ss_dssp --------------------------------CCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEE
T ss_pred --------------------------------CCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 357888888754311 1235789999999999998886 899
Q ss_pred EEeccceeecCCC-------CCCCCCccchhhHHHHHHHhh
Q psy3626 148 SVCLSAFLFYEPS-------KVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 148 i~iSS~~~~~~~~-------~~p~~~~~~~~~~~~~~~~l~ 181 (189)
|++||..+++... ..+.+...|..+|...|.+++
T Consensus 123 v~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~ 163 (345)
T 2z1m_A 123 YQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITV 163 (345)
T ss_dssp EEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred EEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHH
Confidence 9999998765422 112345568888888888776
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-19 Score=139.92 Aligned_cols=131 Identities=13% Similarity=0.153 Sum_probs=99.5
Q ss_pred Cc-eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MK-KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~-~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+ +|+||||+||+|+++++.|+++|++|++++|. .+|+++++++.++++..
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~------------- 55 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------LLDITNISQVQQVVQEI------------- 55 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------TSCTTCHHHHHHHHHHH-------------
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------ccCCCCHHHHHHHHHhc-------------
Confidence 66 99999999999999999999999999999993 26777777776666531
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
++|+|||+++..... ...++|+.++.+++++|++.++ ++|++||
T Consensus 56 ----------------------------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 ----------------------------RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp ----------------------------CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred ----------------------------CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 356677766654321 1245789999999999999887 7999999
Q ss_pred ceeecCCCC-------CCCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 153 AFLFYEPSK-------VPPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 153 ~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
..++..... .+.+..+|...|...|++++....+|+
T Consensus 107 ~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 149 (287)
T 3sc6_A 107 DYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYF 149 (287)
T ss_dssp GGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEE
T ss_pred hhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcE
Confidence 988754321 223456788899999999987665554
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=138.58 Aligned_cols=140 Identities=18% Similarity=0.171 Sum_probs=100.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-------CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-------LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+|+||||+||||++++++|+++| ++|++++|+++........++.++.+|++++++++++++
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------- 84 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVE--------- 84 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHH---------
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHh---------
Confidence 4689999999999999999999999 899999998654432223456666667766666555442
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC------CCCcceehhhHHHHHHHHHHCC----
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND------LSPTTVMSEGMKNIVTAMKEYN---- 143 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~------~~~~~~~~~~~~~ll~~~~~~~---- 143 (189)
+++|+|||++|.... ....++|+.++.+++++|++.+
T Consensus 85 ---------------------------------~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~ 131 (342)
T 2hrz_A 85 ---------------------------------ARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDG 131 (342)
T ss_dssp ---------------------------------TCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------------cCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 245677777765431 0123578999999999998876
Q ss_pred -ccEEEEeccceeecCCCC-------CCCCCccchhhHHHHHHHhhh
Q psy3626 144 -VSVVSVCLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 144 -~~~~i~iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~ 182 (189)
+++||++||..++..... .+.+..+|..+|...|.++++
T Consensus 132 ~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 178 (342)
T 2hrz_A 132 YKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSD 178 (342)
T ss_dssp CCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHH
Confidence 789999999987764211 112455678888888887763
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=138.02 Aligned_cols=151 Identities=15% Similarity=0.132 Sum_probs=99.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|++++|......... . .++.++...+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~-~----------~~~~~~~l~~~~--------------- 56 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGG-S----------LPESLRRVQELT--------------- 56 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSS-S----------SBHHHHHHHHHH---------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCccccccc-c----------cHHHHHHHHhcc---------------
Confidence 68999999999999999999999999999998754310000 0 000000000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
..++..+.+|+.+.+.+.+++. ++|+|||++|..... ...++|+.++.+++++|++.++++||++||
T Consensus 57 ----~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 57 ----GRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp ----TCCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----CCceEEEECCCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 1134455555555555555555 678888888754311 123578999999999999999999999999
Q ss_pred ceeecCCCC-------CCCC-CccchhhHHHHHHHhhh
Q psy3626 153 AFLFYEPSK-------VPPM-FHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 153 ~~~~~~~~~-------~p~~-~~~~~~~~~~~~~~l~~ 182 (189)
..+++.... .+.+ ...|..+|...|++++.
T Consensus 133 ~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~ 170 (348)
T 1ek6_A 133 ATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRD 170 (348)
T ss_dssp GGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence 887754211 1122 45688888888888763
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=137.37 Aligned_cols=145 Identities=20% Similarity=0.223 Sum_probs=92.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------c--CCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------Y--HSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
.|+|+||||+||||++++++|+++|++|+++.| +++..... . ..++.++.+|++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------- 63 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLS----------------- 63 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTT-----------------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCC-----------------
Confidence 478999999999999999999999999999998 54321110 0 012344444444
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--C----CcceehhhHHHHHHHHHHC-Cc
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--S----PTTVMSEGMKNIVTAMKEY-NV 144 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~----~~~~~~~~~~~ll~~~~~~-~~ 144 (189)
+++.+.++++++|+|||+++..... . ..++|+.++.+++++|.+. ++
T Consensus 64 --------------------------d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~ 117 (322)
T 2p4h_X 64 --------------------------NPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTV 117 (322)
T ss_dssp --------------------------CGGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred --------------------------CHHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4444555555566777776543110 1 2357899999999999988 78
Q ss_pred cEEEEeccceeecCCCCCC-----------------CCCc-cchhhHHHHHHHhh----hcCCCCC
Q psy3626 145 SVVSVCLSAFLFYEPSKVP-----------------PMFH-NVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p-----------------~~~~-~~~~~~~~~~~~l~----~~~~~~t 188 (189)
++||++||..+++..+... .+.. .|..+|...|.++. +.+++|+
T Consensus 118 ~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ 183 (322)
T 2p4h_X 118 KRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVV 183 (322)
T ss_dssp CEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred cEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 9999999987543211100 0011 47777877776654 3466664
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=140.72 Aligned_cols=161 Identities=17% Similarity=0.124 Sum_probs=104.2
Q ss_pred ceEEEEcCCChhhHHHHHHHH-HcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAAL-KQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+||||+||||++++++|+ ++|++|++++|.......... ....+.+...++.... .
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~-------~---- 62 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDH---------VETRENVARKLQQSDG-------P---- 62 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTT---------SCCHHHHHHHHHHSCS-------S----
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccc---------cchHHHHHHHHHHhhc-------c----
Confidence 689999999999999999999 999999999997644210000 0001111111111100 0
Q ss_pred CCccccCceeEEeccccCHHHHHHHhc--C-CCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIE--G-KDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.+.....++..+.+|+.+++.+.+++. + +|+|||++|..... ...++|+.++.+++++|++.++++||++
T Consensus 63 ~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~ 142 (397)
T 1gy8_A 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFS 142 (397)
T ss_dssp CCTTTTCCCEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccCCceEEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEE
Confidence 000000015666777777776666665 4 89999998865421 1245789999999999999999999999
Q ss_pred ccceeecCCC-------C-------CCCCCccchhhHHHHHHHhhh
Q psy3626 151 LSAFLFYEPS-------K-------VPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 151 SS~~~~~~~~-------~-------~p~~~~~~~~~~~~~~~~l~~ 182 (189)
||..++.... . .+.+...|..+|...|.+++.
T Consensus 143 SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~ 188 (397)
T 1gy8_A 143 SSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRD 188 (397)
T ss_dssp EEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHH
Confidence 9987765432 1 112345678888888887763
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.5e-19 Score=138.47 Aligned_cols=136 Identities=14% Similarity=0.098 Sum_probs=95.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||+|++++++|+++|+ +.. .....++++.+|+++++++.+++++.
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~~-------------- 60 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGAG------LPG-----EDWVFVSSKDADLTDTAQTRALFEKV-------------- 60 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----CEEEECCTTTCCTTSHHHHHHHHHHS--------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----ccccccCceecccCCHHHHHHHHhhc--------------
Confidence 68999999999999999999999998 111 11133445567777777766666542
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-----C---CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-----L---SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-----~---~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
++|+|||+++.... . ...++|+.++.+++++|++.++++||++||
T Consensus 61 ---------------------------~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 61 ---------------------------QPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp ---------------------------CCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ---------------------------CCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 25777777765331 0 124579999999999999999999999999
Q ss_pred ceeecCCCCC-----------CCCCc-cchhhHHHHHHHhhh----cCCCCC
Q psy3626 153 AFLFYEPSKV-----------PPMFH-NVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 153 ~~~~~~~~~~-----------p~~~~-~~~~~~~~~~~~l~~----~~~~~t 188 (189)
..+++..... +.+.. +|..+|...|++++. .+++|+
T Consensus 114 ~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 165 (319)
T 4b8w_A 114 TCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFT 165 (319)
T ss_dssp GGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred hhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 9887653321 11222 477788888887763 466654
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.7e-18 Score=136.89 Aligned_cols=136 Identities=19% Similarity=0.191 Sum_probs=98.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC--Cccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL--PSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+|+||||||++|+++++.|+++|++|++++|+++.. ..+. ..+++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~------------------------------- 54 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT------------------------------- 54 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEE-------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcE-------------------------------
Confidence 6899999999999999999999999999999987543 1111 12334
Q ss_pred CCCCccccCceeEEecc-ccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCC-ccEEEEecccee-
Q psy3626 79 QRLPSEYHSKVEIIQGD-VLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAFL- 155 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~~- 155 (189)
.+.+| +.+++.+.++++++|++|++++... ...|..+ ++++++|++.+ +++||++||...
T Consensus 55 ------------~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~----~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~ 117 (352)
T 1xgk_A 55 ------------LFQGPLLNNVPLMDTLFEGAHLAFINTTSQA----GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHS 117 (352)
T ss_dssp ------------EEESCCTTCHHHHHHHHTTCSEEEECCCSTT----SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGG
T ss_pred ------------EEECCccCCHHHHHHHHhcCCEEEEcCCCCC----cHHHHHH-HHHHHHHHHcCCccEEEEeCCcccc
Confidence 44455 5555555555666677777765432 1235555 99999999998 999999999862
Q ss_pred ecCCCCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 156 FYEPSKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
..+ +....+|+.+|...|+++++.+++|++
T Consensus 118 ~~~----~~~~~~y~~sK~~~E~~~~~~gi~~~i 147 (352)
T 1xgk_A 118 LYG----PWPAVPMWAPKFTVENYVRQLGLPSTF 147 (352)
T ss_dssp GTS----SCCCCTTTHHHHHHHHHHHTSSSCEEE
T ss_pred ccC----CCCCccHHHHHHHHHHHHHHcCCCEEE
Confidence 221 122346889999999999988888763
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-18 Score=135.18 Aligned_cols=148 Identities=14% Similarity=0.062 Sum_probs=101.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCC--CCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQR--LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+|+||||+||||++++++|+++| ++|++++|.+.. ...+... ..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~------------------~~------------- 52 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDL------------------ED------------- 52 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTT------------------TT-------------
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhh------------------cc-------------
Confidence 689999999999999999999996 899999987521 1111000 00
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCc-cEEEE
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNV-SVVSV 149 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~-~~~i~ 149 (189)
..++..+.+|+.+.+.+.+++.++|+|||++|..... ...++|+.++.+++++|.+.+. ++||+
T Consensus 53 --------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~ 124 (336)
T 2hun_A 53 --------DPRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVH 124 (336)
T ss_dssp --------CTTEEEEECCTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred --------CCceEEEEcCCCCHHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 1144555556666666666666778888888764311 1245799999999999998764 79999
Q ss_pred eccceeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 150 CLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 150 iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+||..+++.... .+.+...|..+|...|++++. .+++++
T Consensus 125 ~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 174 (336)
T 2hun_A 125 VSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNAS 174 (336)
T ss_dssp EEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred eccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEE
Confidence 999887654211 123345688889888887763 355543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.6e-18 Score=135.66 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=101.8
Q ss_pred eEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+||||+||||++++++|+++ |++|++++|++.... ++.++.+|++++++++++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~-------------- 61 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKY-------------- 61 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHT--------------
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhc--------------
Confidence 5899999999999999999998 899999998765432 4567778888877776666511
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC------CCCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+|||+++.... ....++|+.++.+++++|++.++++||++||..
T Consensus 62 ---------------------------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~ 114 (317)
T 3ajr_A 62 ---------------------------SIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIG 114 (317)
T ss_dssp ---------------------------TCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred ---------------------------CCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHH
Confidence 34666666654321 112357899999999999999999999999998
Q ss_pred eecCCCC--------CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 155 LFYEPSK--------VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 155 ~~~~~~~--------~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
++..... .+.+...|..+|...|.+++ +.+++++
T Consensus 115 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 160 (317)
T 3ajr_A 115 VFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVR 160 (317)
T ss_dssp GCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 8764211 11235667888888887765 3356554
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-18 Score=135.62 Aligned_cols=140 Identities=18% Similarity=0.179 Sum_probs=95.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+||||+||||++++++|+++|++|++++|........ ...++.++.+|+++++++++++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 72 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-------- 72 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT--------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc--------
Confidence 4899999999999999999999999999998754322110 0123344455555544444433321
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVV 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~ 147 (189)
++|++||++|..... ...++|+.++.+++++|++.++++|
T Consensus 73 ---------------------------------~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~i 119 (338)
T 1udb_A 73 ---------------------------------AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119 (338)
T ss_dssp ---------------------------------TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ---------------------------------CCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 368888888754211 1235789999999999999888999
Q ss_pred EEeccceeecCCCC------CC--CCCccchhhHHHHHHHhhh
Q psy3626 148 SVCLSAFLFYEPSK------VP--PMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 148 i~iSS~~~~~~~~~------~p--~~~~~~~~~~~~~~~~l~~ 182 (189)
|++||..+++.... .| +....|..+|...|++++.
T Consensus 120 v~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~ 162 (338)
T 1udb_A 120 IFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTD 162 (338)
T ss_dssp EEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHH
T ss_pred EEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHH
Confidence 99999887653211 11 1245688888888887763
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-18 Score=136.24 Aligned_cols=148 Identities=14% Similarity=0.139 Sum_probs=99.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCC--CCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQ--RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+|+||||+||||++++++|+++ |++|++++|.+. ....+... ..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~-------------- 48 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI------------------SE-------------- 48 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT------------------TT--------------
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhh------------------hc--------------
Confidence 47999999999999999999998 799999998752 11111000 00
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHC--Ccc--
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEY--NVS-- 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~--~~~-- 145 (189)
..++..+.+|+.+.+.+.++++ ++|+|||++|..... ...++|+.++.+++++|.+. +++
T Consensus 49 -------~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~ 121 (361)
T 1kew_A 49 -------SNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121 (361)
T ss_dssp -------CTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH
T ss_pred -------CCCeEEEECCCCCHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 1134444455555555555554 678888888764311 12457899999999999987 776
Q ss_pred -----EEEEeccceeecCCCC-----------------CCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 146 -----VVSVCLSAFLFYEPSK-----------------VPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 146 -----~~i~iSS~~~~~~~~~-----------------~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+||++||..+++.... .+.+...|..+|...|.+++. .+++++
T Consensus 122 ~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ 190 (361)
T 1kew_A 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTI 190 (361)
T ss_dssp HHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred cccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEE
Confidence 9999999876653210 123455688889888888763 255544
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-18 Score=135.26 Aligned_cols=146 Identities=23% Similarity=0.242 Sum_probs=99.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccc-cChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDV-LKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
||+|+||||||++|+++++.|+++|++|++++|+++.... . .....++. +.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~~~-l~--------------- 53 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAAN------------PETKEELIDN-YQ--------------- 53 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSC------------HHHHHHHHHH-HH---------------
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCC------------hHHHHHHHHH-HH---------------
Confidence 7899999999999999999999999999999998621110 0 00000100 11
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCC-ccEEEEeccceeecC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAFLFYE 158 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~~~~~ 158 (189)
...+.++.+|+.+++.+.++++++|++|++++... +.++.+++++|++.+ +++||+ |+.+...+
T Consensus 54 ------~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~--------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~ 118 (307)
T 2gas_A 54 ------SLGVILLEGDINDHETLVKAIKQVDIVICAAGRLL--------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVD 118 (307)
T ss_dssp ------HTTCEEEECCTTCHHHHHHHHTTCSEEEECSSSSC--------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTT
T ss_pred ------hCCCEEEEeCCCCHHHHHHHHhCCCEEEECCcccc--------cccHHHHHHHHHhcCCceEEee-cccccCcc
Confidence 11455677777777777788888899999988642 678899999999998 999983 33221111
Q ss_pred CCCCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 159 PSKVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
....+.+....+..|...++++++.+++||+
T Consensus 119 ~~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~ 149 (307)
T 2gas_A 119 RHDAVEPVRQVFEEKASIRRVIEAEGVPYTY 149 (307)
T ss_dssp SCCCCTTHHHHHHHHHHHHHHHHHHTCCBEE
T ss_pred cccCCCcchhHHHHHHHHHHHHHHcCCCeEE
Confidence 1111112122337889999999988999874
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-18 Score=134.85 Aligned_cols=140 Identities=17% Similarity=0.213 Sum_probs=95.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++|+||||||++|+++++.|+++|++|++++|+++..... ++. +.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~-----------------~~~-l~----------------- 56 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTL-----------------LDE-FQ----------------- 56 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHH-----------------HHH-HH-----------------
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhH-----------------HHH-hh-----------------
Confidence 4899999999999999999999999999999987522110 000 00
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCC-ccEEEEeccceeecCCC
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAFLFYEPS 160 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~~~~~~~ 160 (189)
...+.++.+|+.|++.+.++++++|+||++++.. .+.++++++++|++.+ +++||+ |+.+...+..
T Consensus 57 ----~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~--------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~ 123 (318)
T 2r6j_A 57 ----SLGAIIVKGELDEHEKLVELMKKVDVVISALAFP--------QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRI 123 (318)
T ss_dssp ----HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG--------GSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTC
T ss_pred ----cCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh--------hhHHHHHHHHHHHhcCCCCEEEe-eccccCcccc
Confidence 0134455556666666666666778888888753 2567899999999998 999984 4322111110
Q ss_pred CCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 161 KVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
..+.+....+..|..+|+++++.+++||+
T Consensus 124 ~~~~p~~~~y~sK~~~e~~~~~~~~~~~~ 152 (318)
T 2r6j_A 124 NALPPFEALIERKRMIRRAIEEANIPYTY 152 (318)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTTCCBEE
T ss_pred cCCCCcchhHHHHHHHHHHHHhcCCCeEE
Confidence 11111122347889999999999999873
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=136.04 Aligned_cols=132 Identities=15% Similarity=0.103 Sum_probs=98.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||+|++++++|+ +|++|++++|++. ++.+|+++++++++++++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~--------------- 53 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKL--------------- 53 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHH---------------
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhc---------------
Confidence 489999999999999999999 8999999999752 3467888877777666541
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+|||+++..... ...++|+.++.+++++|++.++ +||++||..
T Consensus 54 --------------------------~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~ 106 (299)
T 1n2s_A 54 --------------------------RPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDY 106 (299)
T ss_dssp --------------------------CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGG
T ss_pred --------------------------CCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEeccc
Confidence 246666666643311 1135789999999999999887 899999998
Q ss_pred eecCCCC-------CCCCCccchhhHHHHHHHhhhcCCCC
Q psy3626 155 LFYEPSK-------VPPMFHNVNDDHQRMYNVLKDSGLNY 187 (189)
Q Consensus 155 ~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~~~~~~ 187 (189)
++..... .+.+...|...|...|+++++...++
T Consensus 107 vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 146 (299)
T 1n2s_A 107 VFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKH 146 (299)
T ss_dssp GSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSE
T ss_pred EEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCe
Confidence 8764322 12334567888999999888654444
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=137.09 Aligned_cols=135 Identities=19% Similarity=0.204 Sum_probs=97.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+|+||||+|++|++++++|+++ |+ +|++++|++.+...+ ...+.
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~------------------~~~~~--------------- 68 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEM------------------AMEFN--------------- 68 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHH------------------HHHHC---------------
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHH------------------HHHhc---------------
Confidence 68999999999999999999999 97 999999975433211 00010
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
..++..+.+|+.|.+.+.++++++|+|||++|.... ....++|+.++.++++++.+.++++||++||
T Consensus 69 ------~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 69 ------DPRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp ------CTTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ------CCCEEEEECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 013445555555555555666666777777765431 1224579999999999999999999999999
Q ss_pred ceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 153 AFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 153 ~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
...+. +..+|..+|...|.+++.
T Consensus 143 ~~~~~-------p~~~Y~~sK~~~E~~~~~ 165 (344)
T 2gn4_A 143 DKAAN-------PINLYGATKLCSDKLFVS 165 (344)
T ss_dssp GGGSS-------CCSHHHHHHHHHHHHHHH
T ss_pred CccCC-------CccHHHHHHHHHHHHHHH
Confidence 76542 235688889999988774
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.4e-18 Score=142.19 Aligned_cols=166 Identities=13% Similarity=0.105 Sum_probs=110.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc---CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ---GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+|+||||+||||++++++|+++ |++|++++|+++..... ..+.+.+...+.-..
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~---------------~~l~~~~~~~~~~~~------ 131 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR---------------RRLEKTFDSGDPELL------ 131 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHH---------------HHHHGGGCSSCHHHH------
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHH---------------HHHHHHHHhcchhhh------
Confidence 689999999999999999999999 89999999986543211 000000000000000
Q ss_pred CCCCCccccCceeEEecccc------CHHHHHHHhcCCCEEEEeeccCCCCC---CcceehhhHHHHHHHHHHCCccEEE
Q psy3626 78 PQRLPSEYHSKVEIIQGDVL------KLADVKKAIEGKDGVVVALGTRNDLS---PTTVMSEGMKNIVTAMKEYNVSVVS 148 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~vv~~~~~~~~~~---~~~~~~~~~~~ll~~~~~~~~~~~i 148 (189)
..+...+..++.++.+|+. +.+.+.+.++++|+|||+++...... ..++|+.++.+++++|.+.++++||
T Consensus 132 -~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V 210 (478)
T 4dqv_A 132 -RHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFT 210 (478)
T ss_dssp -HHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEE
T ss_pred -hhhhhhccCceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 0000001235666677775 55677788888999999998765422 2458999999999999999999999
Q ss_pred EeccceeecCCCCCCCC------------------CccchhhHHHHHHHhhh----cCCCCC
Q psy3626 149 VCLSAFLFYEPSKVPPM------------------FHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 149 ~iSS~~~~~~~~~~p~~------------------~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
++||..++......+.. ...|..+|...|.++++ .+++++
T Consensus 211 ~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 272 (478)
T 4dqv_A 211 YVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVA 272 (478)
T ss_dssp EEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeE
Confidence 99998876542211100 12378889999988874 366654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.8e-18 Score=134.08 Aligned_cols=142 Identities=14% Similarity=0.028 Sum_probs=97.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+|||||||+|++++++|+++|++|++++|+++...... ..+... .+
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~----~~------------------------- 56 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPP-EGTGKF----LE------------------------- 56 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCC-TTSSEE----EC-------------------------
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccch-hhhhhh----cc-------------------------
Confidence 468999999999999999999999999999999876211100 000000 00
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-------CCCCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN-------DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~-------~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
...+..+.+|+. ++|+|||+++... +....+ |+.++.+++++|++.++++||++||.
T Consensus 57 -----~~~~~~~~~Dl~----------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~ 120 (321)
T 3vps_A 57 -----KPVLELEERDLS----------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTC 120 (321)
T ss_dssp -----SCGGGCCHHHHT----------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEG
T ss_pred -----CCCeeEEeCccc----------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCH
Confidence 012222333322 6788999888543 223345 99999999999999999999999999
Q ss_pred eeecCCCC-------CCCCCccchhhHHHHHHHhhh----cCC-CCC
Q psy3626 154 FLFYEPSK-------VPPMFHNVNDDHQRMYNVLKD----SGL-NYI 188 (189)
Q Consensus 154 ~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~----~~~-~~t 188 (189)
.++..... .+.+...|..+|...|+++++ .++ +|+
T Consensus 121 ~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ 167 (321)
T 3vps_A 121 EVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVG 167 (321)
T ss_dssp GGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSSSSCEEE
T ss_pred HHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCceE
Confidence 88765322 123346678889988888874 466 554
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.7e-18 Score=131.31 Aligned_cols=141 Identities=18% Similarity=0.088 Sum_probs=106.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+++||||+|+||++++++|+++|++|++++|+++....+ ...++.++.+|++++++++++++.
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~------------ 72 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAAD------------ 72 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHH------------
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHH------------
Confidence 36899999999999999999999999999999987665443 235678888888888888777653
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------Ccceehhh----HHHHHHHHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEG----MKNIVTAMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~----~~~ll~~~~~~ 142 (189)
+.+.++++|++||++|.....+ ..++|+.+ ++.+++.+++.
T Consensus 73 ------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 128 (281)
T 3m1a_A 73 ------------------------VLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER 128 (281)
T ss_dssp ------------------------HHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ------------------------HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2445567899999998643221 12478888 77788888888
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..+... .+....|..+|...+.+.+
T Consensus 129 ~~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~ 163 (281)
T 3m1a_A 129 GSGSVVNISSFGGQLS----FAGFSAYSATKAALEQLSE 163 (281)
T ss_dssp TCEEEEEECCGGGTCC----CTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCccccCC----CCCchHHHHHHHHHHHHHH
Confidence 8889999999877543 2334567778877776654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-18 Score=134.88 Aligned_cols=130 Identities=18% Similarity=0.107 Sum_probs=97.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+|||||||||++++++|+++|++|++++|+ .+|+++++++.+++++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~--------------- 62 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEK--------------- 62 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHH---------------
T ss_pred ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhc---------------
Confidence 589999999999999999999999999999986 25777777766666521
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+|||++|..... ...++|+.++.+++++|++.++ +||++||..
T Consensus 63 --------------------------~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~ 115 (292)
T 1vl0_A 63 --------------------------KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDY 115 (292)
T ss_dssp --------------------------CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG
T ss_pred --------------------------CCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHH
Confidence 356666666643311 1245789999999999999887 999999998
Q ss_pred eecCCCCC-------CCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 155 LFYEPSKV-------PPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 155 ~~~~~~~~-------p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
++...... +.+...|..+|...|++++....+|+
T Consensus 116 v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 156 (292)
T 1vl0_A 116 VFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYY 156 (292)
T ss_dssp GSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEE
T ss_pred eECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCCeE
Confidence 77543211 22345688889999999887655543
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-18 Score=137.49 Aligned_cols=113 Identities=20% Similarity=0.198 Sum_probs=81.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEE-eccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEII-QGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+|+||||+||||++++++|+++|++|++++|+++....+. ..+++++ .+|++++
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----------------- 74 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ----------------- 74 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-----------------
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh-----------------
Confidence 68999999999999999999999999999999754322110 1234444 4455444
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----CcceehhhHHHHHHHHHH-CCccEEE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----PTTVMSEGMKNIVTAMKE-YNVSVVS 148 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----~~~~~~~~~~~ll~~~~~-~~~~~~i 148 (189)
+.+.++++++|+|||+++...... ..++|+.++.+++++|.+ .++++||
T Consensus 75 --------------------------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv 128 (342)
T 1y1p_A 75 --------------------------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128 (342)
T ss_dssp --------------------------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEE
T ss_pred --------------------------HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 444445556677777777543221 135789999999999985 5789999
Q ss_pred Eeccceeec
Q psy3626 149 VCLSAFLFY 157 (189)
Q Consensus 149 ~iSS~~~~~ 157 (189)
++||..+++
T Consensus 129 ~~SS~~~~~ 137 (342)
T 1y1p_A 129 LTSSTVSAL 137 (342)
T ss_dssp EECCGGGTC
T ss_pred EeccHHHhc
Confidence 999988764
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.8e-18 Score=132.77 Aligned_cols=143 Identities=20% Similarity=0.216 Sum_probs=98.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
||+|+||||||++|+++++.|+++|++|++++|++ +..... ....+.. +.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------------~~~~l~~-~~--------------- 54 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPS-------------SVQLREE-FR--------------- 54 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHH-------------HHHHHHH-HH---------------
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChH-------------HHHHHHH-hh---------------
Confidence 68999999999999999999999999999999986 221100 0000000 00
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCC-ccEEEEeccceee-c
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYN-VSVVSVCLSAFLF-Y 157 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~~~~i~iSS~~~~-~ 157 (189)
...+.++.+|+.|++.+.++++++|+||++++... +.++++++++|++.+ +++||+ |..+. .
T Consensus 55 ------~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~~~--------~~~~~~l~~aa~~~g~v~~~v~--S~~g~~~ 118 (321)
T 3c1o_A 55 ------SMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPM--------ISSQIHIINAIKAAGNIKRFLP--SDFGCEE 118 (321)
T ss_dssp ------HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG--------SGGGHHHHHHHHHHCCCCEEEC--SCCSSCG
T ss_pred ------cCCcEEEEecCCCHHHHHHHHcCCCEEEECCCccc--------hhhHHHHHHHHHHhCCccEEec--cccccCc
Confidence 11455666777777777777778889999887642 677899999999998 999983 33321 1
Q ss_pred CCCCCCCC-CccchhhHHHHHHHhhhcCCCCCC
Q psy3626 158 EPSKVPPM-FHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 158 ~~~~~p~~-~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
+....+.+ ...| ..|..+|+++++.+++||+
T Consensus 119 ~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~ 150 (321)
T 3c1o_A 119 DRIKPLPPFESVL-EKKRIIRRAIEAAALPYTY 150 (321)
T ss_dssp GGCCCCHHHHHHH-HHHHHHHHHHHHHTCCBEE
T ss_pred cccccCCCcchHH-HHHHHHHHHHHHcCCCeEE
Confidence 11011111 2234 7889999999988999874
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=143.92 Aligned_cols=145 Identities=15% Similarity=0.143 Sum_probs=101.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
||+|+||||+||||++++++|+++ |++|++++|+++....+ ...+++++.+|++++++
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~-------------------- 374 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSE-------------------- 374 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHH--------------------
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHH--------------------
Confidence 478999999999999999999998 89999999987655432 12345566666665443
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
.+.+.++++|+|||++|..... ...++|+.++.+++++|++.+ ++||++|
T Consensus 375 ----------------------~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~S 431 (660)
T 1z7e_A 375 ----------------------WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPS 431 (660)
T ss_dssp ----------------------HHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ----------------------HHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEe
Confidence 1333344556677766644321 113468899999999999998 9999999
Q ss_pred cceeecCCCCCC--------------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 152 SAFLFYEPSKVP--------------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 152 S~~~~~~~~~~p--------------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
|..+++.....+ .+...|..+|...|++++ +.+++|+
T Consensus 432 S~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 486 (660)
T 1z7e_A 432 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFT 486 (660)
T ss_dssp CGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred cHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEE
Confidence 988875432211 122357778888888875 3466664
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.6e-18 Score=133.24 Aligned_cols=132 Identities=15% Similarity=0.076 Sum_probs=95.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+||||++++++|+++|++|+++.|+. .+|++++++++++++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~--------------- 54 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASE--------------- 54 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhc---------------
Confidence 5899999999999999999999999999988752 25777777666665510
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC--------CCCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND--------LSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~--------~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
++|+|||+++.... ....++|+.++.+++++|++.++++||++||.
T Consensus 55 --------------------------~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 108 (321)
T 1e6u_A 55 --------------------------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108 (321)
T ss_dssp --------------------------CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred --------------------------CCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccH
Confidence 45666666664421 01234689999999999999999999999999
Q ss_pred eeecCCCC-----------CCCCC-ccchhhHHHHHHHhhh----cCCCCC
Q psy3626 154 FLFYEPSK-----------VPPMF-HNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~-----------~p~~~-~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
.++..... .+.+. ..|...|...|+++++ .+++|+
T Consensus 109 ~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 159 (321)
T 1e6u_A 109 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYR 159 (321)
T ss_dssp GGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEE
Confidence 88754221 11121 3577788888888764 366654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=145.60 Aligned_cols=152 Identities=14% Similarity=0.158 Sum_probs=101.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|++....... ..+.. +.
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~--------------~~l~~-~~---------------- 59 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV--------------ARLEV-LT---------------- 59 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH--------------HHHHH-HH----------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH--------------HHHhh-cc----------------
Confidence 368999999999999999999999999999999764432100 00000 00
Q ss_pred CCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCL 151 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iS 151 (189)
..++..+.+|+.+++.+.+++. ++|+|||++|..... ...++|+.++.+++++|++.++++||++|
T Consensus 60 -----~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~S 134 (699)
T 1z45_A 60 -----KHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSS 134 (699)
T ss_dssp -----TSCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred -----CCceEEEEcCCCCHHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 0133344445555555555554 567788887754321 12457899999999999998899999999
Q ss_pred cceeecCCC-----------CCCCCCccchhhHHHHHHHhhh------cCCCCC
Q psy3626 152 SAFLFYEPS-----------KVPPMFHNVNDDHQRMYNVLKD------SGLNYI 188 (189)
Q Consensus 152 S~~~~~~~~-----------~~p~~~~~~~~~~~~~~~~l~~------~~~~~t 188 (189)
|..+++... ..+.+...|..+|..+|++++. .+++|+
T Consensus 135 S~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ 188 (699)
T 1z45_A 135 SATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFA 188 (699)
T ss_dssp EGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEE
T ss_pred cHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEE
Confidence 988764321 0112345678889888888763 456554
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.5e-17 Score=125.93 Aligned_cols=139 Identities=13% Similarity=0.062 Sum_probs=104.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+.+.... .++.++.+|++++++++++++.+
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~--------------- 90 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREG--------------- 90 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHH---------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHH---------------
Confidence 579999999999999999999999999999998766543 47889999999999988877543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~~~ 146 (189)
.+.++++|++|+++|.....+. .++|+.++.++++++ ++.+.++
T Consensus 91 ---------------------~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~ 149 (260)
T 3un1_A 91 ---------------------IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGH 149 (260)
T ss_dssp ---------------------HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred ---------------------HHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 4556788999999986543321 237788877766655 6677789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+....+ ..+...|..+|...+.+.+
T Consensus 150 iv~isS~~~~~~~~--~~~~~~Y~~sKaa~~~l~~ 182 (260)
T 3un1_A 150 IVSITTSLVDQPMV--GMPSALASLTKGGLNAVTR 182 (260)
T ss_dssp EEEECCTTTTSCBT--TCCCHHHHHHHHHHHHHHH
T ss_pred EEEEechhhccCCC--CCccHHHHHHHHHHHHHHH
Confidence 99999987643211 1223446666777766555
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=131.83 Aligned_cols=147 Identities=9% Similarity=0.013 Sum_probs=101.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+||||+||||++++++|+++| ++|++++|++.......-.++. +.+|+++++.++.++++.
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~-------------- 111 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGE-------------- 111 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTC--------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhc--------------
Confidence 689999999999999999999999 9999999976542110001222 456666666555554421
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
.++++|+|||+++..... ...++|+.++.+++++|++.++ +||++||..+
T Consensus 112 ------------------------~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v 166 (357)
T 2x6t_A 112 ------------------------EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAAT 166 (357)
T ss_dssp ------------------------CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGG
T ss_pred ------------------------ccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHH
Confidence 012478888888765431 1235789999999999999888 9999999987
Q ss_pred ecCCCCCC-------CCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 156 FYEPSKVP-------PMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 156 ~~~~~~~p-------~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
++.....| .+...|..+|...|++++. .+++|+
T Consensus 167 ~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 210 (357)
T 2x6t_A 167 YGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIV 210 (357)
T ss_dssp GCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEE
T ss_pred hCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 75432211 2345678889888888763 255554
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=127.70 Aligned_cols=140 Identities=19% Similarity=0.079 Sum_probs=105.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+......++.++.+|++++++++++++.
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~---------------- 80 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITR---------------- 80 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHH----------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHH----------------
Confidence 5799999999999999999999999999999987766555556788899999999998887754
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~~~~~~~~ 146 (189)
+.+.++++|++|+++|.....+. .++|+.++.+ +++.+++.+.++
T Consensus 81 --------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 140 (266)
T 3p19_A 81 --------------------AEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGT 140 (266)
T ss_dssp --------------------HHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred --------------------HHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence 34556788999999987543221 2367777666 455556667789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..++... +....|..+|...+.+.+
T Consensus 141 IV~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 171 (266)
T 3p19_A 141 IINISSIAGKKTF----PDHAAYCGTKFAVHAISE 171 (266)
T ss_dssp EEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred EEEEcChhhCCCC----CCCchHHHHHHHHHHHHH
Confidence 9999998876532 223457777777665544
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.1e-18 Score=138.80 Aligned_cols=160 Identities=14% Similarity=0.106 Sum_probs=102.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||++++++|+++|++|++++|++...... ..+.+.++..-. ..
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------------~~l~~~l~~~~~----------~~ 123 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAW---------------YKLMTNLNDYFS----------EE 123 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHH---------------HHHHHHHHHHSC----------HH
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHH---------------HHHHHHHHHhcc----------cc
Confidence 46899999999999999999998999999999987622110 000000000000 00
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
+......++.++.+|+.+++.+. .+.++|+|||+++..... ...++|+.++.+++++|.+ +.++||++||..+
T Consensus 124 ~~~~~~~~v~~v~~Dl~d~~~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~- 200 (427)
T 4f6c_A 124 TVEMMLSNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV- 200 (427)
T ss_dssp HHHHHHTTEEEEEECC---CCCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-
T ss_pred ccccccCceEEEeCCCCCcccCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-
Confidence 00000124555556665554444 566789999998865422 2245899999999999999 7799999999887
Q ss_pred cCC------------CC---CCCCCccchhhHHHHHHHhhh---cCCCCC
Q psy3626 157 YEP------------SK---VPPMFHNVNDDHQRMYNVLKD---SGLNYI 188 (189)
Q Consensus 157 ~~~------------~~---~p~~~~~~~~~~~~~~~~l~~---~~~~~t 188 (189)
+.. .. .+.+...|..+|..+|.++++ .+++|+
T Consensus 201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ 250 (427)
T 4f6c_A 201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGR 250 (427)
T ss_dssp GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEE
Confidence 221 00 022556788889999988875 677765
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=131.91 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=96.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
||+|+||||+||||++++++|+++|++|++++|.+...... ...++.++.
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~------------------------- 81 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELIN------------------------- 81 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEE-------------------------
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEe-------------------------
Confidence 57999999999999999999999999999999975432211 012334444
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEE
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVS 148 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i 148 (189)
+|+.+. .+.++|+|||+++..... ...++|+.++.+++++|++.+. ++|
T Consensus 82 ------------------~D~~~~-----~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v 137 (343)
T 2b69_A 82 ------------------HDVVEP-----LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLL 137 (343)
T ss_dssp ------------------CCTTSC-----CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEE
T ss_pred ------------------CccCCh-----hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEE
Confidence 444332 234678888888764321 1235789999999999999886 999
Q ss_pred EeccceeecCCCC------------CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 149 VCLSAFLFYEPSK------------VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 149 ~iSS~~~~~~~~~------------~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
++||..+++.... .+.+...|..+|...|++++ +.+++|+
T Consensus 138 ~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 193 (343)
T 2b69_A 138 LASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 193 (343)
T ss_dssp EEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 9999887754221 11223457778888888775 3366654
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.9e-17 Score=126.22 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=95.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+|++|++++++|+ +|++|++++|++... .+ +.+|+++++++++++++.
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~--------------- 56 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKK--------------- 56 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHH---------------
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhc---------------
Confidence 489999999999999999999 589999999986421 11 677888877777666541
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|++||++|..... ...++|+.++.++++++++.+. ++|++||..
T Consensus 57 --------------------------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~ 109 (273)
T 2ggs_A 57 --------------------------RPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDY 109 (273)
T ss_dssp --------------------------CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGG
T ss_pred --------------------------CCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecce
Confidence 256666666654311 1235789999999999999886 999999998
Q ss_pred eecCCCC------CCCCCccchhhHHHHHHHhhh
Q psy3626 155 LFYEPSK------VPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 155 ~~~~~~~------~p~~~~~~~~~~~~~~~~l~~ 182 (189)
++...+. .+.+...|..+|...|++++.
T Consensus 110 ~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 110 VFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ 143 (273)
T ss_dssp GSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred eEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence 8754221 112345677888888888765
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-17 Score=131.60 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=87.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-----CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-----LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+|+||||+||+|++++++|+++| ++|++++|++.... ....+++++.+|+++++++.+++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~--------- 71 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLT--------- 71 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCT---------
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCC---------
Confidence 689999999999999999999999 99999999876543 223456667777777666665555420
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--CCcceehhhHHHHHHHHHHC--CccEEE----
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--SPTTVMSEGMKNIVTAMKEY--NVSVVS---- 148 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~~~~~~~~~~~~ll~~~~~~--~~~~~i---- 148 (189)
++|+|||+++..... ...++|+.++.+++++|++. +++++|
T Consensus 72 -------------------------------~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g 120 (364)
T 2v6g_A 72 -------------------------------DVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 120 (364)
T ss_dssp -------------------------------TCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECC
T ss_pred -------------------------------CCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccC
Confidence 167788887755322 12457999999999999998 789998
Q ss_pred ---EeccceeecC
Q psy3626 149 ---VCLSAFLFYE 158 (189)
Q Consensus 149 ---~iSS~~~~~~ 158 (189)
++||..+++.
T Consensus 121 ~~i~~Ss~~vyg~ 133 (364)
T 2v6g_A 121 RKHYMGPFESYGK 133 (364)
T ss_dssp THHHHCCGGGTTT
T ss_pred ceEEEechhhccc
Confidence 7888877654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.4e-18 Score=141.69 Aligned_cols=161 Identities=14% Similarity=0.155 Sum_probs=102.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+|||||||+|++++++|+++|++|++++|++...... ..+...++... +..
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~---------------~~l~~~l~~~~----------~~~ 204 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAW---------------YKLMTNLNDYF----------SEE 204 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHH---------------HHHHHHHHHHS----------CHH
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHH---------------HHHHHHHHHhc----------ccc
Confidence 57999999999999999999988899999999987632110 00000000000 000
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcceehhhHHHHHHHHHHCCccEEEEecccee-
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL- 155 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~- 155 (189)
+......++.++.+|+.+++.+. ...++|+|||+++..... ...++|+.++++++++|.+ +.++|||+||..+
T Consensus 205 ~~~~~~~~v~~v~~Dl~d~~~l~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG 282 (508)
T 4f6l_B 205 TVEMMLSNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVG 282 (508)
T ss_dssp HHHHHSTTEEEEEEBTTBCSSCC-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTT
T ss_pred cchhccCceEEEecCCcccccCC-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhc
Confidence 00001224555555555544443 556789999998865422 2345799999999999998 6789999999887
Q ss_pred -ecCC---------CCC---CCCCccchhhHHHHHHHhhh---cCCCCC
Q psy3626 156 -FYEP---------SKV---PPMFHNVNDDHQRMYNVLKD---SGLNYI 188 (189)
Q Consensus 156 -~~~~---------~~~---p~~~~~~~~~~~~~~~~l~~---~~~~~t 188 (189)
+... ... +.+...|..+|...|+++++ .+++|+
T Consensus 283 ~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ 331 (508)
T 4f6l_B 283 TYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGR 331 (508)
T ss_dssp SEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEE
Confidence 1110 000 12456788889999988874 577765
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.6e-17 Score=127.96 Aligned_cols=146 Identities=9% Similarity=0.018 Sum_probs=99.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
+|+||||+||+|++++++|+++| ++|++++|++.........++. +.+|+++++.++.++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~-------------- 65 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEE-------------- 65 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCC--------------
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccc--------------
Confidence 58999999999999999999999 9999999976432110001122 4455555555444443210
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCccEEEEeccceee
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLF 156 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~ 156 (189)
..++|+|||+++..... ...++|+.++.+++++|++.++ +||++||..++
T Consensus 66 ------------------------~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~ 120 (310)
T 1eq2_A 66 ------------------------FGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATY 120 (310)
T ss_dssp ------------------------CSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGG
T ss_pred ------------------------cCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHh
Confidence 01368888888765431 1135789999999999999888 99999999877
Q ss_pred cCCCCC-------CCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 157 YEPSKV-------PPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 157 ~~~~~~-------p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+..... +.+..+|..+|...|+++++ .+++|+
T Consensus 121 g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~ 163 (310)
T 1eq2_A 121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIV 163 (310)
T ss_dssp TTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSSCEE
T ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 543321 12345678888888888763 256654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=123.60 Aligned_cols=135 Identities=16% Similarity=0.028 Sum_probs=101.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++. ..++.++.+|++++++++++++..
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~--------------- 68 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHI--------------- 68 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHH---------------
Confidence 689999999999999999999999999999998754 256788999999999988877543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~~~ 146 (189)
.+.++++|++|+++|.....+. .++|+.++.++++++ ++.+.++
T Consensus 69 ---------------------~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 127 (264)
T 2dtx_A 69 ---------------------FKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPS 127 (264)
T ss_dssp ---------------------HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCE
T ss_pred ---------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 4556778999999986543211 236777765555544 4556789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..++... +....|..+|...+.+.+
T Consensus 128 iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 158 (264)
T 2dtx_A 128 IVNISSVQASIIT----KNASAYVTSKHAVIGLTK 158 (264)
T ss_dssp EEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred EEEECCchhccCC----CCchhHHHHHHHHHHHHH
Confidence 9999998875431 233457777877776665
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=123.35 Aligned_cols=140 Identities=18% Similarity=0.085 Sum_probs=100.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ....+.++.+|++++++++++++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~------------- 74 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDT------------- 74 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHH-------------
Confidence 5799999999999999999999999999999986544321 123467788888888887776653
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~~~~ 143 (189)
+.+.++++|++||++|.....+. .++|+.++ +.+++.+++.+
T Consensus 75 -----------------------~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 131 (260)
T 1nff_A 75 -----------------------AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG 131 (260)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 23445678999999886543211 23667776 56666677777
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..++... +....|..+|...+.+.+
T Consensus 132 ~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (260)
T 1nff_A 132 RGSIINISSIEGLAGT----VACHGYTATKFAVRGLTK 165 (260)
T ss_dssp CEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeehhhcCCC----CCchhHHHHHHHHHHHHH
Confidence 7899999998876532 223457777777766554
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=122.12 Aligned_cols=140 Identities=20% Similarity=0.206 Sum_probs=97.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 73 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAA--------- 73 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH---------
Confidence 6799999999999999999999999999999986543221 123566777777777777666643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---C-----------cceehhhH----HHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---P-----------TTVMSEGM----KNIV 136 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---~-----------~~~~~~~~----~~ll 136 (189)
+.+.++++|++|+++|.....+ . .++|+.++ +.++
T Consensus 74 ---------------------------~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 126 (250)
T 2cfc_A 74 ---------------------------TMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVL 126 (250)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ---------------------------HHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 2334457899999988643322 0 13566665 4455
Q ss_pred HHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 TAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 ~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++.+.+++|++||..++... +....|..+|...+.+.+
T Consensus 127 ~~~~~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 167 (250)
T 2cfc_A 127 PHMLLQGAGVIVNIASVASLVAF----PGRSAYTTSKGAVLQLTK 167 (250)
T ss_dssp HHHHHHTCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEECChhhccCC----CCchhHHHHHHHHHHHHH
Confidence 56666677899999998775432 233457777777766554
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-17 Score=123.22 Aligned_cols=135 Identities=14% Similarity=0.067 Sum_probs=95.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+++||||+|+||++++++|+++|++|++++|+++.... .+.+|++++++++++++..
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~-------------- 59 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRC-------------- 59 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHH--------------
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHc--------------
Confidence 8899999999999999999999999999999998765432 1567777777766655311
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----CcceehhhHHHHHHHHHH----CCccEEEEecc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----PTTVMSEGMKNIVTAMKE----YNVSVVSVCLS 152 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----~~~~~~~~~~~ll~~~~~----~~~~~~i~iSS 152 (189)
.+++|++||++|...... ..++|+.++.++++++.. .+.+++|++||
T Consensus 60 -------------------------~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS 114 (255)
T 2dkn_A 60 -------------------------GGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS 114 (255)
T ss_dssp -------------------------TTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred -------------------------CCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEec
Confidence 135788888888654211 235788888888886654 46689999999
Q ss_pred ceeecCCCCC----------------------CCCCccchhhHHHHHHHhh
Q psy3626 153 AFLFYEPSKV----------------------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 153 ~~~~~~~~~~----------------------p~~~~~~~~~~~~~~~~l~ 181 (189)
..++...... +.....|..+|...+.+++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~ 165 (255)
T 2dkn_A 115 IAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLAR 165 (255)
T ss_dssp GGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHH
Confidence 9887542110 1234457777877776665
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.1e-17 Score=123.08 Aligned_cols=141 Identities=13% Similarity=0.116 Sum_probs=98.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeE-EeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEI-IQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
||+++||||+|+||++++++|+++|++|+++ .|+++....+ ...++.. +.+|++++++++++++.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 73 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQ------- 73 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHH-------
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH-------
Confidence 7899999999999999999999999999998 7765443221 1123444 67777777776666543
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------Ccceehhh----HHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEG----MKNIVT 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~----~~~ll~ 137 (189)
+.+.++++|++||++|.....+ ..++|+.+ ++.+++
T Consensus 74 -----------------------------~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 124 (245)
T 2ph3_A 74 -----------------------------AAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVK 124 (245)
T ss_dssp -----------------------------HHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred -----------------------------HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 2344567899999998654321 12367777 666677
Q ss_pred HHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 125 ~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 164 (245)
T 2ph3_A 125 LMMKARFGRIVNITSVVGILGN----PGQANYVASKAGLIGFTR 164 (245)
T ss_dssp HHHHHTCEEEEEECCTHHHHCC----SSBHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEeChhhccCC----CCCcchHHHHHHHHHHHH
Confidence 7777777899999998765532 223456777776665544
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.3e-17 Score=125.58 Aligned_cols=142 Identities=17% Similarity=0.150 Sum_probs=102.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--------- 105 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQ--------- 105 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999987654322 1245677888888888777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-CCC------------cceehhh----HHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-LSP------------TTVMSEG----MKNIVTA 138 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-~~~------------~~~~~~~----~~~ll~~ 138 (189)
.+.++++|++|+++|.... .+. .++|+.+ ++++++.
T Consensus 106 ---------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 158 (279)
T 3ctm_A 106 ---------------------------EKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKI 158 (279)
T ss_dssp ---------------------------HHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3445668999999886543 111 2367777 6788888
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.++||++||..+... ..++....|..+|...+.+.+
T Consensus 159 ~~~~~~~~iv~isS~~~~~~--~~~~~~~~Y~~sK~a~~~~~~ 199 (279)
T 3ctm_A 159 FKKNGKGSLIITSSISGKIV--NIPQLQAPYNTAKAACTHLAK 199 (279)
T ss_dssp HHHHTCCEEEEECCCTTSCC-----CCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEECchHhccC--CCCCCcccHHHHHHHHHHHHH
Confidence 88877889999999876542 112334567778888777665
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=129.32 Aligned_cols=117 Identities=13% Similarity=0.081 Sum_probs=90.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+|+|||||||+|++++++|+++|+ +|++++|+ .++++++++++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~---------------- 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALL---------------- 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHH----------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhc----------------
Confidence 5899999999999999999999998 88877764 34444444444
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC---CCcceehhhHHHHHHHHHHCCcc-EEEEeccceee
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL---SPTTVMSEGMKNIVTAMKEYNVS-VVSVCLSAFLF 156 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~---~~~~~~~~~~~~ll~~~~~~~~~-~~i~iSS~~~~ 156 (189)
++|+|||+++..... ...++|+.++.+++++|++.+++ +||++||..++
T Consensus 46 ---------------------------~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~ 98 (369)
T 3st7_A 46 ---------------------------KADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQAT 98 (369)
T ss_dssp ---------------------------HCSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGG
T ss_pred ---------------------------cCCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhc
Confidence 456677776654332 33567999999999999999887 99999999876
Q ss_pred cCCCCCCCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 157 YEPSKVPPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 157 ~~~~~~p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
. ..+|..+|...|+++++ .+++|+
T Consensus 99 ~--------~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 126 (369)
T 3st7_A 99 Q--------DNPYGESKLQGEQLLREYAEEYGNTVY 126 (369)
T ss_dssp S--------CSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred C--------CCCchHHHHHHHHHHHHHHHHhCCCEE
Confidence 5 34588889999988875 577765
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=5.3e-17 Score=123.73 Aligned_cols=140 Identities=18% Similarity=0.048 Sum_probs=100.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++..
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----------- 71 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAA----------- 71 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHH-----------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHH-----------
Confidence 46899999999999999999999999999999987654432 1235788889999988888777543
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~ 142 (189)
.+.+++.|++|+++|.....+. .++|+.++.++.+++ ++.
T Consensus 72 -------------------------~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 126 (235)
T 3l6e_A 72 -------------------------VEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER 126 (235)
T ss_dssp -------------------------HHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -------------------------HHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 4556788999999997543211 246777776555555 444
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ +++|++||..+.... +....|..+|...+.+.+
T Consensus 127 ~-~~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 160 (235)
T 3l6e_A 127 G-GVLANVLSSAAQVGK----ANESLYCASKWGMRGFLE 160 (235)
T ss_dssp C-EEEEEECCEECCSSC----SSHHHHHHHHHHHHHHHH
T ss_pred C-CEEEEEeCHHhcCCC----CCCcHHHHHHHHHHHHHH
Confidence 4 499999998876532 223456777777766555
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=120.75 Aligned_cols=140 Identities=16% Similarity=0.073 Sum_probs=99.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+.. .++.++.+|++++++++++++..
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------- 72 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAM------------- 72 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHH-------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHH-------------
Confidence 469999999999999999999999999999998654432211 25778888888888887776543
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHHHCCc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMKEYNV 144 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~~~~~ 144 (189)
.+.++++|++|+++|.....+. .++|+.++ +.+++.+++.+.
T Consensus 73 -----------------------~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~ 129 (234)
T 2ehd_A 73 -----------------------EEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGG 129 (234)
T ss_dssp -----------------------HHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC
T ss_pred -----------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 3445678999999886543221 23566665 456666777778
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++||++||..++... +....|..+|...+.+.+
T Consensus 130 ~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 162 (234)
T 2ehd_A 130 GTIVNVGSLAGKNPF----KGGAAYNASKFGLLGLAG 162 (234)
T ss_dssp EEEEEECCTTTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred cEEEEECCchhcCCC----CCCchhhHHHHHHHHHHH
Confidence 899999998765421 233456777776655443
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=123.56 Aligned_cols=140 Identities=14% Similarity=0.022 Sum_probs=99.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 80 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV--------- 80 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986544321 1235667778888877777666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~---- 139 (189)
.+.+ +++|++||++|.....+ ..++|+.++.++++++
T Consensus 81 ---------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 133 (260)
T 2ae2_A 81 ---------------------------ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFL 133 (260)
T ss_dssp ---------------------------HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3344 67899999998654321 1236777777766655
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 134 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 171 (260)
T 2ae2_A 134 KASERGNVVFISSVSGALAV----PYEAVYGATKGAMDQLTR 171 (260)
T ss_dssp HHTSSEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcchhhccCC----CCcchHHHHHHHHHHHHH
Confidence 56677899999998765421 223457777877776665
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-16 Score=120.60 Aligned_cols=140 Identities=14% Similarity=0.059 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+++||||+|+||++++++|+++|++|++++|++ +..... ...++.++.+|++++++++++++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------------ 75 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ------------ 75 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH------------
Confidence 5799999999999999999999999999999987 433211 134577788888888887776643
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~~~~ 142 (189)
+.+.++++|++|+++|.....+. .++|+.++.+ +++.+++.
T Consensus 76 ------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (249)
T 2ew8_A 76 ------------------------VISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 131 (249)
T ss_dssp ------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 23456788999999986543221 2367777544 44456676
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..++... +....|..+|...+.+.+
T Consensus 132 ~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 166 (249)
T 2ew8_A 132 GWGRIINLTSTTYWLKI----EAYTHYISTKAANIGFTR 166 (249)
T ss_dssp TCEEEEEECCGGGGSCC----SSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcchhhccCC----CCchhHHHHHHHHHHHHH
Confidence 77899999998876532 233457777777766554
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-16 Score=121.66 Aligned_cols=141 Identities=16% Similarity=0.066 Sum_probs=98.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---CCce-eEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKV-EIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
++++||||+|+||++++++|+++|++|++++|+++...... ..++ .++.+|++++++++++++..
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~----------- 80 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEA----------- 80 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHH-----------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHH-----------
Confidence 57999999999999999999999999999999865443221 2344 67778888887777666432
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~~~ 142 (189)
.+ +++.|++||++|....... .++|+.++ +.+++.+++.
T Consensus 81 -------------------------~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (254)
T 2wsb_A 81 -------------------------EA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR 134 (254)
T ss_dssp -------------------------HH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred -------------------------Hh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 23 5678999999986543211 23677774 4455556666
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..++...+.. +...|..+|...+.+.+
T Consensus 135 ~~~~iv~isS~~~~~~~~~~--~~~~Y~~sK~a~~~~~~ 171 (254)
T 2wsb_A 135 GAGAIVNLGSMSGTIVNRPQ--FASSYMASKGAVHQLTR 171 (254)
T ss_dssp TCEEEEEECCGGGTSCCSSS--CBHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecchhccCCCCC--cchHHHHHHHHHHHHHH
Confidence 77899999998876532211 12457777777766554
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=121.64 Aligned_cols=140 Identities=19% Similarity=0.140 Sum_probs=99.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 78 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVES--------- 78 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH---------
Confidence 57999999999999999999999999999999865443211 34567778888888777776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----H
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA----M 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~----~ 139 (189)
+.+.++++|++||++|.....+. .++|+.++.+++++ +
T Consensus 79 ---------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 131 (263)
T 3ai3_A 79 ---------------------------VRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGM 131 (263)
T ss_dssp ---------------------------HHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 23445688999999986543211 23566666555554 4
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..++... +....|..+|...+.+.+
T Consensus 132 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 169 (263)
T 3ai3_A 132 RARGGGAIIHNASICAVQPL----WYEPIYNVTKAALMMFSK 169 (263)
T ss_dssp HHHTCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEECchhhcCCC----CCcchHHHHHHHHHHHHH
Confidence 55667899999998876532 223457777777766554
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.1e-16 Score=124.33 Aligned_cols=140 Identities=18% Similarity=0.109 Sum_probs=103.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------C-CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------H-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... . .++.++.+|++++++++++++.
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~--------- 112 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART--------- 112 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH---------
Confidence 58999999999999999999999999999999976654321 1 4677888888888888777754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++++
T Consensus 113 ---------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 165 (293)
T 3rih_A 113 ---------------------------VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPL 165 (293)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34566789999999997543321 247778877776665
Q ss_pred HHCCccEEEEeccceee-cCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLF-YEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~-~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+. .. .+....|..+|...+.+.+
T Consensus 166 ~~~~~g~iV~isS~~~~~~~----~~~~~~Y~asKaa~~~l~~ 204 (293)
T 3rih_A 166 TASGRGRVILTSSITGPVTG----YPGWSHYGASKAAQLGFMR 204 (293)
T ss_dssp HHHSSCEEEEECCSBTTTBB----CTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEeChhhccCC----CCCCHHHHHHHHHHHHHHH
Confidence 56667899999998764 22 1233457777777766655
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=121.33 Aligned_cols=140 Identities=19% Similarity=0.122 Sum_probs=98.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------- 76 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT---------- 76 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH----------
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHH----------
Confidence 58999999999999999999999999999999865433211 145777888888888777766542
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~~ 141 (189)
.+.++++|++|+++|....... .++|+.++ +.+++.+++
T Consensus 77 --------------------------~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 130 (251)
T 1zk4_A 77 --------------------------EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN 130 (251)
T ss_dssp --------------------------HHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred --------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 3445678999999886543211 23566644 455666667
Q ss_pred CCc-cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNV-SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~-~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. ++||++||..++... +....|..+|...+.+.+
T Consensus 131 ~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 167 (251)
T 1zk4_A 131 KGLGASIINMSSIEGFVGD----PSLGAYNASKGAVRIMSK 167 (251)
T ss_dssp SSSCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCchhccCC----CCCccchHHHHHHHHHHH
Confidence 776 899999998876432 233457777777766554
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.3e-16 Score=119.62 Aligned_cols=135 Identities=12% Similarity=0.120 Sum_probs=102.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+......++..+.+|++++++++++++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----------------- 74 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFE----------------- 74 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHH-----------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHH-----------------
Confidence 689999999999999999999999999999999988877777788899999999988776654
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---------cceehhhH----HHHHHHHHHCCccEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---------TTVMSEGM----KNIVTAMKEYNVSVVS 148 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---------~~~~~~~~----~~ll~~~~~~~~~~~i 148 (189)
.+++.|++|+++|...+... .++|+.++ +.+++.+++.+ +++|
T Consensus 75 -----------------------~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IV 130 (242)
T 4b79_A 75 -----------------------ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSIL 130 (242)
T ss_dssp -----------------------HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEE
T ss_pred -----------------------hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEE
Confidence 34678999999987543321 13566654 44555555555 7999
Q ss_pred EeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 149 VCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 149 ~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+||..+....+ ....|..+|..+..+.+
T Consensus 131 nisS~~~~~~~~----~~~~Y~asKaav~~ltr 159 (242)
T 4b79_A 131 NIASMYSTFGSA----DRPAYSASKGAIVQLTR 159 (242)
T ss_dssp EECCGGGTSCCS----SCHHHHHHHHHHHHHHH
T ss_pred EEeeccccCCCC----CCHHHHHHHHHHHHHHH
Confidence 999998754322 23356777777766555
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-16 Score=122.37 Aligned_cols=140 Identities=15% Similarity=-0.003 Sum_probs=105.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------------- 78 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDF------------- 78 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHH-------------
Confidence 5899999999999999999999999999999998765432 235677888899998888877754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-CC------------CcceehhhHHHHHHHH----HH
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-LS------------PTTVMSEGMKNIVTAM----KE 141 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-~~------------~~~~~~~~~~~ll~~~----~~ 141 (189)
+.+.+++.|++|+++|.... .. ..++|+.++.++.+++ ++
T Consensus 79 -----------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 135 (271)
T 3tzq_B 79 -----------------------TIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS 135 (271)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 34556789999999987632 11 1237777777766665 67
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 136 ~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 171 (271)
T 3tzq_B 136 AGGGAIVNISSATAHAAY----DMSTAYACTKAAIETLTR 171 (271)
T ss_dssp TTCEEEEEECCGGGTSBC----SSCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCHHHcCCC----CCChHHHHHHHHHHHHHH
Confidence 777899999998876432 233457777777776655
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.67 E-value=6.5e-16 Score=119.02 Aligned_cols=140 Identities=18% Similarity=0.101 Sum_probs=99.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------------- 74 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAF------------- 74 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH-------------
Confidence 57999999999999999999999999999999987665432 34678888999998888877754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---------------cceehhhHHHHHHHHHHC-
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---------------TTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---------------~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.++++|++|+++|....... .++|+.++.++++++...
T Consensus 75 -----------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 131 (257)
T 3tpc_A 75 -----------------------AKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVM 131 (257)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34556688999999986543211 247778877777766431
Q ss_pred ---------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 ---------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ---------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 132 ~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~Y~asKaa~~~~~~ 175 (257)
T 3tpc_A 132 SQGEPDADGERGVIVNTASIAAFDGQI----GQAAYAASKGGVAALTL 175 (257)
T ss_dssp TTSCCCTTSCCEEEEEECCTHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HhccccCCCCCeEEEEEechhhccCCC----CCcchHHHHHHHHHHHH
Confidence 457999999988765322 33457777777765544
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=122.70 Aligned_cols=142 Identities=16% Similarity=0.102 Sum_probs=98.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+. ..++.++.+|++++++++++++.
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-------- 104 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA-------- 104 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH--------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHH--------
Confidence 57999999999999999999999999999999865433211 13456677777777776666543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~ 138 (189)
+.+.++++|++|+++|....... .++|+.+ ++++++.
T Consensus 105 ----------------------------~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~ 156 (279)
T 1xg5_A 105 ----------------------------IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 156 (279)
T ss_dssp ----------------------------HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 23344578999999886543221 2367777 7888889
Q ss_pred HHHCCc--cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNV--SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~--~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+. ++||++||..++...+ ......|..+|...+.+.+
T Consensus 157 ~~~~~~~~g~iv~isS~~~~~~~~--~~~~~~Y~~sK~a~~~~~~ 199 (279)
T 1xg5_A 157 MKERNVDDGHIININSMSGHRVLP--LSVTHFYSATKYAVTALTE 199 (279)
T ss_dssp HHHTTCCSCEEEEECCGGGTSCCS--CGGGHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCceEEEEcChhhcccCC--CCCCchhHHHHHHHHHHHH
Confidence 988875 7999999988653211 1223456667776665443
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-16 Score=122.30 Aligned_cols=140 Identities=19% Similarity=0.134 Sum_probs=96.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+ ...++.++.+|++++++++++++.
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 78 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEE--------- 78 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986543321 123566677777777776666543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhH----HHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGM----KNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~----~~ll~~~ 139 (189)
+.+.++++|++||++|.....+ ..++|+.++ +.+++.+
T Consensus 79 ---------------------------~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 131 (248)
T 2pnf_A 79 ---------------------------IYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKM 131 (248)
T ss_dssp ---------------------------HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHH
T ss_pred ---------------------------HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 2333457899999988654321 124677777 4455566
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 132 ~~~~~~~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 169 (248)
T 2pnf_A 132 IKQRWGRIVNISSVVGFTGNV----GQVNYSTTKAGLIGFTK 169 (248)
T ss_dssp HHHTCEEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEccHHhcCCCC----CCchHHHHHHHHHHHHH
Confidence 666778999999987655322 23456677776665554
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=121.65 Aligned_cols=140 Identities=18% Similarity=0.102 Sum_probs=98.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++| +++..... ...++.++.+|++++++++++++.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 75 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQ--------- 75 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH---------
Confidence 68999999999999999999999999999998 54333211 124566777888888777776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~ 139 (189)
+.+.++++|++|+++|.....+. .++|+.+ ++.+++.+
T Consensus 76 ---------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 128 (246)
T 2uvd_A 76 ---------------------------TVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFM 128 (246)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 23445678999999986543211 2367777 45556666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 129 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 166 (246)
T 2uvd_A 129 MRQRHGRIVNIASVVGVTGN----PGQANYVAAKAGVIGLTK 166 (246)
T ss_dssp HHHTCEEEEEECCTHHHHCC----TTBHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEECCHHhcCCC----CCCchHHHHHHHHHHHHH
Confidence 66677899999998776532 223456667776655543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.67 E-value=4.2e-16 Score=119.94 Aligned_cols=140 Identities=13% Similarity=0.056 Sum_probs=98.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC--Ccc--cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL--PSE--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+++||||+|+||++++++|+++|++|++++|+++.. ..+ ...++.++.+|++++++++++++.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~------------ 72 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFAL------------ 72 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHH------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH------------
Confidence 6899999999999999999999999999999986510 001 123566777888888877776643
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehh----hHHHHHHHHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSE----GMKNIVTAMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~----~~~~ll~~~~~~ 142 (189)
+.+.++++|++||++|.....+. .++|+. .++.+++.+++.
T Consensus 73 ------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 128 (255)
T 2q2v_A 73 ------------------------AEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR 128 (255)
T ss_dssp ------------------------HHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred ------------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 23445678999999886543211 235565 456667777888
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..++... +....|..+|...+.+.+
T Consensus 129 ~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 163 (255)
T 2q2v_A 129 NWGRIINIASVHGLVGS----TGKAAYVAAKHGVVGLTK 163 (255)
T ss_dssp TCEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCchhccCC----CCchhHHHHHHHHHHHHH
Confidence 88899999998875432 223457777777766554
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=123.31 Aligned_cols=140 Identities=18% Similarity=0.119 Sum_probs=98.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++.+|+++.+... ...++.++.+|++++++++++++.
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~------------- 94 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEV------------- 94 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHH-------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHH-------------
Confidence 5899999999999999999999999999999986554432 235677888888888888777653
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~ 143 (189)
+.+.++++|++|+++|....... .++|+.+ ++.+++.+++.+
T Consensus 95 -----------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 151 (266)
T 3grp_A 95 -----------------------AEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR 151 (266)
T ss_dssp -----------------------HHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34556789999999987543221 2377777 556666667777
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..+.... +....|..+|...+.+.+
T Consensus 152 ~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 185 (266)
T 3grp_A 152 YGRIINITSIVGVVGN----PGQTNYCAAKAGLIGFSK 185 (266)
T ss_dssp CEEEEEECCC-----------CHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCHHHcCCC----CCchhHHHHHHHHHHHHH
Confidence 7899999998876532 223457777777665554
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-16 Score=121.12 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=100.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------------- 72 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAY------------- 72 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH-------------
Confidence 6899999999999999999999999999999986544322 124567788888888887776643
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHH----HHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMK----NIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~----~ll~~~~~~~ 143 (189)
+.+.++++|++|+++|.....+. .++|+.++. .+++.+++.+
T Consensus 73 -----------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 129 (254)
T 1hdc_A 73 -----------------------AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG 129 (254)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 23445678999999986543211 235666654 6777777777
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..++... +....|..+|...+.+.+
T Consensus 130 ~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 163 (254)
T 1hdc_A 130 GGSIVNISSAAGLMGL----ALTSSYGASKWGVRGLSK 163 (254)
T ss_dssp CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECchhhccCC----CCchhHHHHHHHHHHHHH
Confidence 7899999998876432 223457777777766554
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-16 Score=122.57 Aligned_cols=140 Identities=14% Similarity=0.056 Sum_probs=105.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||+++++.|+++|.+|.+.+|+++.+++. ...++.++.+|++++++++++++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~---------- 77 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRR---------- 77 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH----------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH----------
Confidence 6899999999999999999999999999999987655432 235678899999999998888854
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------------cceehhh----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------------~~~~~~~----~~~ll~~~ 139 (189)
+.+.+++.|++|+++|......+ .++|+.+ ++.+++.|
T Consensus 78 --------------------------~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m 131 (254)
T 4fn4_A 78 --------------------------TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIM 131 (254)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 35778899999999996543221 1256555 46667777
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++++-+++|.+||..+.... +....|..+|..+..+.+
T Consensus 132 ~~~~~G~IVnisS~~g~~~~----~~~~~Y~asKaal~~ltr 169 (254)
T 4fn4_A 132 LKQGKGVIVNTASIAGIRGG----FAGAPYTVAKHGLIGLTR 169 (254)
T ss_dssp HHHTCEEEEEECCGGGTCSS----SSCHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEEechhhcCCC----CCChHHHHHHHHHHHHHH
Confidence 77777899999999876432 223357777777765555
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=121.78 Aligned_cols=141 Identities=17% Similarity=0.087 Sum_probs=100.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------c-CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------Y-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... . ..++.++.+|++++++++++++.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~--------- 81 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR--------- 81 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986554321 1 14677788888888887776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++||++|.....+. .++|+.++.++.+++
T Consensus 82 ---------------------------~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m 134 (262)
T 3pk0_A 82 ---------------------------AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDAL 134 (262)
T ss_dssp ---------------------------HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34556689999999986543221 246777766655544
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+... ..+....|..+|...+.+.+
T Consensus 135 ~~~~~g~iv~isS~~~~~~---~~~~~~~Y~asK~a~~~l~~ 173 (262)
T 3pk0_A 135 IASGSGRVVLTSSITGPIT---GYPGWSHYGATKAAQLGFMR 173 (262)
T ss_dssp HHHSSCEEEEECCSBTTTB---CCTTCHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEechhhccC---CCCCChhhHHHHHHHHHHHH
Confidence 4457789999999876411 11234457777877776655
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-15 Score=116.19 Aligned_cols=136 Identities=15% Similarity=0.047 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++.. . .++.++.+|++++++++++++..
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~---~~~~~~~~D~~d~~~~~~~~~~~--------------- 68 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-Q---YPFATEVMDVADAAQVAQVCQRL--------------- 68 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-C---CSSEEEECCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-c---CCceEEEcCCCCHHHHHHHHHHH---------------
Confidence 5899999999999999999999999999999986531 1 23778889999999888877542
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~~~ 146 (189)
.+.++++|++|+++|.....+. .++|+.++.++++++ ++.+.++
T Consensus 69 ---------------------~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~ 127 (250)
T 2fwm_X 69 ---------------------LAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGA 127 (250)
T ss_dssp ---------------------HHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred ---------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCE
Confidence 3445678999999886543211 236777776666655 5666789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+.... +....|..+|...+.+.+
T Consensus 128 iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 158 (250)
T 2fwm_X 128 IVTVASDAAHTPR----IGMSAYGASKAALKSLAL 158 (250)
T ss_dssp EEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred EEEECchhhCCCC----CCCchHHHHHHHHHHHHH
Confidence 9999998875421 233457777777766554
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-16 Score=120.97 Aligned_cols=139 Identities=14% Similarity=0.079 Sum_probs=100.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+. ..++.++.+|++++++++++++.+
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------------ 74 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAV------------ 74 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHH------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHH------------
Confidence 68999999999999999999999999999999865443221 245778888888888887777543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~ 143 (189)
.+.++++|++||++|.....+. .++|+.+ ++.+++.+++.+
T Consensus 75 ------------------------~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 130 (253)
T 1hxh_A 75 ------------------------QRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG 130 (253)
T ss_dssp ------------------------HHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC
T ss_pred ------------------------HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC
Confidence 4456678999999986543211 1245444 456667777777
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++||++||..++... +....|..+|...+.+.+
T Consensus 131 -g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 163 (253)
T 1hxh_A 131 -GSIINMASVSSWLPI----EQYAGYSASKAAVSALTR 163 (253)
T ss_dssp -EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred -CEEEEEcchhhcCCC----CCCccHHHHHHHHHHHHH
Confidence 899999998876431 233457777777766655
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=4.7e-16 Score=119.92 Aligned_cols=140 Identities=16% Similarity=0.055 Sum_probs=100.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------------ 80 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALA------------ 80 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH------------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH------------
Confidence 58999999999999999999999999999999876554321 346778888888888877766532
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------------CcceehhhHHHHHHHHHH
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------------PTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~~~ 141 (189)
.+.++++|++|+++|...... ..++|+.++.++++++..
T Consensus 81 ------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 136 (265)
T 2o23_A 81 ------------------------KGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAG 136 (265)
T ss_dssp ------------------------HHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ------------------------HHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 334457888888888643221 123677777777776654
Q ss_pred C----------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 Y----------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~----------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. +.++||++||..++... +....|..+|...+.+.+
T Consensus 137 ~~~~~~~~~~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 182 (265)
T 2o23_A 137 EMGQNEPDQGGQRGVIINTASVAAFEGQ----VGQAAYSASKGGIVGMTL 182 (265)
T ss_dssp HHTTSCCCTTSCCEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHhcccccCCCCcEEEEeCChhhcCCC----CCCchhHHHHHHHHHHHH
Confidence 2 56899999998876532 223456777776665544
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-15 Score=121.98 Aligned_cols=141 Identities=17% Similarity=0.082 Sum_probs=99.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-----c------cCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-----E------YHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-----~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|+++||||+|+||++++++|+++|++|++..|+...... + ...++.++.+|++++++++++++.
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~----- 80 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ----- 80 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH-----
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH-----
Confidence 579999999999999999999999999999997532211 0 123466667777777666665543
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM 139 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~ 139 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++++
T Consensus 81 -------------------------------~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~ 129 (324)
T 3u9l_A 81 -------------------------------IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAA 129 (324)
T ss_dssp -------------------------------HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -------------------------------HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 23445689999999996543221 247888877776666
Q ss_pred ----HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ----KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ----~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+... .++....|..+|...+.+.+
T Consensus 130 lp~m~~~~~g~iV~isS~~~~~~---~~~~~~~Y~asKaa~~~~~~ 172 (324)
T 3u9l_A 130 LPHMRRQKHGLLIWISSSSSAGG---TPPYLAPYFAAKAAMDAIAV 172 (324)
T ss_dssp HHHHHHHTCEEEEEECCGGGTSC---CCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEecchhccC---CCCcchhHHHHHHHHHHHHH
Confidence 6677789999999887542 12234457778877776554
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-16 Score=123.21 Aligned_cols=140 Identities=13% Similarity=0.060 Sum_probs=102.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~--------- 95 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAA--------- 95 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986554322 1346778888888888887777543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK---- 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~---- 140 (189)
.+.+++.|++|+++|.....+. .++|+.++.++.+++.
T Consensus 96 ---------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (279)
T 3sju_A 96 ---------------------------VERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGG 148 (279)
T ss_dssp ---------------------------HHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSS
T ss_pred ---------------------------HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhh
Confidence 4556789999999997653321 2378888777777653
Q ss_pred --HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 --EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 --~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 149 ~~~~~~g~iV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 187 (279)
T 3sju_A 149 MREAGWGRIVNIASTGGKQGV----MYAAPYTASKHGVVGFTK 187 (279)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhhcCCcEEEEECChhhccCC----CCChhHHHHHHHHHHHHH
Confidence 3566799999998875432 223457777777766554
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.9e-16 Score=120.33 Aligned_cols=140 Identities=13% Similarity=0.117 Sum_probs=99.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 86 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT------- 86 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH-------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH-------
Confidence 58999999999999999999999999999999865443211 345677778888887777766432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-CCC-----------cceehhhH----HHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-LSP-----------TTVMSEGM----KNIVT 137 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-~~~-----------~~~~~~~~----~~ll~ 137 (189)
.+.++++|++|+++|.... .+. .++|+.++ +.+++
T Consensus 87 -----------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 137 (267)
T 1iy8_A 87 -----------------------------TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK 137 (267)
T ss_dssp -----------------------------HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred -----------------------------HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3445678999999986543 111 13556554 45666
Q ss_pred HHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 138 ~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 177 (267)
T 1iy8_A 138 IMREQGSGMVVNTASVGGIRGI----GNQSGYAAAKHGVVGLTR 177 (267)
T ss_dssp HHHHHTCCEEEEECCGGGTSBC----SSBHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEcchhhccCC----CCCccHHHHHHHHHHHHH
Confidence 7777777899999998775431 233457777777765554
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.7e-16 Score=120.00 Aligned_cols=140 Identities=16% Similarity=0.049 Sum_probs=98.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCccc-------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSEY-------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++. ..... ..++.++.+|++++++++++++.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-------- 76 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN-------- 76 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH--------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHH--------
Confidence 689999999999999999999999999999998754 33211 34567778888888877776643
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA---- 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~---- 138 (189)
+.+.++++|++||++|.....+. .++|+.++.+++++
T Consensus 77 ----------------------------~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 128 (260)
T 1x1t_A 77 ----------------------------AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128 (260)
T ss_dssp ----------------------------HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23445678999999986543211 23667766555544
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 129 ~~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 167 (260)
T 1x1t_A 129 MKKQGFGRIINIASAHGLVAS----ANKSAYVAAKHGVVGFTK 167 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECcHHhCcCC----CCCchHHHHHHHHHHHHH
Confidence 455567899999998875432 233457777777766554
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-16 Score=133.45 Aligned_cols=135 Identities=14% Similarity=0.063 Sum_probs=91.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+|+||||+||||+++++.|+++|++|++++|++.... .+.+|+.+. +
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------~v~~d~~~~--~--------------------- 195 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------KRFWDPLNP--A--------------------- 195 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------CEECCTTSC--C---------------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------ceeecccch--h---------------------
Confidence 689999999999999999999999999999999876532 244555432 1
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--------CCcceehhhHHHHHHH-HHHCCccEEEEec
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--------SPTTVMSEGMKNIVTA-MKEYNVSVVSVCL 151 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--------~~~~~~~~~~~~ll~~-~~~~~~~~~i~iS 151 (189)
.+.+.++|+|||+++..... ...++|+.++.+++++ +++.++++||++|
T Consensus 196 ----------------------~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S 253 (516)
T 3oh8_A 196 ----------------------SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS 253 (516)
T ss_dssp ----------------------TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred ----------------------HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 12344678888887764221 1134799999999999 5667889999999
Q ss_pred cceeec-CC------CCCCCCCccchhhHHHHHHHhh---hcCCCCC
Q psy3626 152 SAFLFY-EP------SKVPPMFHNVNDDHQRMYNVLK---DSGLNYI 188 (189)
Q Consensus 152 S~~~~~-~~------~~~p~~~~~~~~~~~~~~~~l~---~~~~~~t 188 (189)
|..+++ +. ...|.+...|...+...|..+. +.+++|+
T Consensus 254 S~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~~gi~~~ 300 (516)
T 3oh8_A 254 AVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVA 300 (516)
T ss_dssp EGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHHTTCEEE
T ss_pred cceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHhCCCCEE
Confidence 988765 21 1122233334444555554433 5566665
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=122.46 Aligned_cols=141 Identities=11% Similarity=0.043 Sum_probs=98.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~---------- 99 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL---------- 99 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHH----------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHH----------
Confidence 57999999999999999999999999999999865433211 125677788888888877766432
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~~~ 141 (189)
.+.++++|++|+++|.....+. .++|+.++.+ +++.+++
T Consensus 100 --------------------------~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 153 (276)
T 2b4q_A 100 --------------------------GELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRR 153 (276)
T ss_dssp --------------------------HHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred --------------------------HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3445678999999986543211 2367777644 4445555
Q ss_pred CCc----cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNV----SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~----~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. ++||++||..++... |.....|..+|...+.+.+
T Consensus 154 ~~~~~~~g~iV~isS~~~~~~~---~~~~~~Y~asK~a~~~~~~ 194 (276)
T 2b4q_A 154 SASAENPARVINIGSVAGISAM---GEQAYAYGPSKAALHQLSR 194 (276)
T ss_dssp HCCSSSCEEEEEECCGGGTCCC---CCSCTTHHHHHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCHHHcCCC---CCCccccHHHHHHHHHHHH
Confidence 554 899999998876432 2211157777877776655
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.8e-16 Score=119.12 Aligned_cols=139 Identities=10% Similarity=0.026 Sum_probs=100.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++..
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--------- 78 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAA--------- 78 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999987766532 1346778888888888887777543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHH----HHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIV----TAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll----~~~~ 140 (189)
.+. ++.|++|+++|.....+. .++|+.++.++. +.++
T Consensus 79 ---------------------------~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 130 (252)
T 3h7a_A 79 ---------------------------DAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLML 130 (252)
T ss_dssp ---------------------------HHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------Hhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 333 678999999987553321 236666665544 4456
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 131 ~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 167 (252)
T 3h7a_A 131 AHGQGKIFFTGATASLRGG----SGFAAFASAKFGLRAVAQ 167 (252)
T ss_dssp HHTCEEEEEEEEGGGTCCC----TTCHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEECCHHHcCCC----CCCccHHHHHHHHHHHHH
Confidence 6666899999998876432 223457777777665554
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-15 Score=118.02 Aligned_cols=136 Identities=16% Similarity=0.124 Sum_probs=101.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++... .....+.+|++++++++++++.
T Consensus 15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~---------------- 74 (269)
T 3vtz_A 15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEK---------------- 74 (269)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHH----------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHH----------------
Confidence 68999999999999999999999999999999876553 3567889999999998888754
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----HHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA----MKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~----~~~~~~~~ 146 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.++ +++.+.++
T Consensus 75 --------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~ 134 (269)
T 3vtz_A 75 --------------------TTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGS 134 (269)
T ss_dssp --------------------HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred --------------------HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCE
Confidence 34566789999999987543321 23677776555554 45566789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..++... +....|..+|...+.+.+
T Consensus 135 iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 165 (269)
T 3vtz_A 135 IINIASVQSYAAT----KNAAAYVTSKHALLGLTR 165 (269)
T ss_dssp EEEECCGGGTSBC----TTCHHHHHHHHHHHHHHH
T ss_pred EEEECchhhccCC----CCChhHHHHHHHHHHHHH
Confidence 9999999876532 223457777777776655
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.9e-16 Score=119.31 Aligned_cols=140 Identities=15% Similarity=0.151 Sum_probs=101.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---------- 76 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ---------- 76 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH----------
Confidence 6899999999999999999999999999999986554322 124677888888888888777754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH-----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----- 139 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.+++
T Consensus 77 --------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 130 (257)
T 3imf_A 77 --------------------------IDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWI 130 (257)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34556789999999986543221 236777776666655
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 131 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 168 (257)
T 3imf_A 131 EKGIKGNIINMVATYAWDAG----PGVIHSAAAKAGVLAMTK 168 (257)
T ss_dssp HHTCCCEEEEECCGGGGSCC----TTCHHHHHHHHHHHHHHH
T ss_pred hhCCCcEEEEECchhhccCC----CCcHHHHHHHHHHHHHHH
Confidence 34456899999998876532 233456667776665544
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=122.30 Aligned_cols=140 Identities=9% Similarity=-0.031 Sum_probs=97.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+ ...++.++.+|++++++++++++.
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---------- 81 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF---------- 81 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH----------
Confidence 5899999999999999999999999999999986543221 123566677777777766665542
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----------CcceehhhHHHHHHHH----HH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----------PTTVMSEGMKNIVTAM----KE 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----------~~~~~~~~~~~ll~~~----~~ 141 (189)
+.+.++++|++|+++|.....+ ..++|+.++.++++++ ++
T Consensus 82 --------------------------~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 135 (255)
T 1fmc_A 82 --------------------------AISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK 135 (255)
T ss_dssp --------------------------HHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 2233457888999888654321 1236788877766665 45
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.++||++||..++... +....|..+|...+.+.+
T Consensus 136 ~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 171 (255)
T 1fmc_A 136 NGGGVILTITSMAAENKN----INMTSYASSKAAASHLVR 171 (255)
T ss_dssp HTCEEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcchhhcCCC----CCCcccHHHHHHHHHHHH
Confidence 567899999998765421 234457777877776655
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.5e-16 Score=121.58 Aligned_cols=139 Identities=15% Similarity=0.139 Sum_probs=95.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 80 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA------- 80 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH-------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH-------
Confidence 57999999999999999999999999999999865433211 125667777777777776666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~ 138 (189)
.+.++ +|++|+++|.....+. .++|+.++ +.+++.
T Consensus 81 -----------------------------~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 130 (260)
T 2z1n_A 81 -----------------------------RDLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQ 130 (260)
T ss_dssp -----------------------------HHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred -----------------------------HHhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 22234 7888888885433211 23566665 556666
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.++||++||..++... +....|..+|...+.+.+
T Consensus 131 ~~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 169 (260)
T 2z1n_A 131 MVEKGWGRMVYIGSVTLLRPW----QDLALSNIMRLPVIGVVR 169 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----TTBHHHHHHTHHHHHHHH
T ss_pred HHhcCCcEEEEECchhhcCCC----CCCchhHHHHHHHHHHHH
Confidence 667777899999998876431 223456667776665544
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=122.07 Aligned_cols=140 Identities=17% Similarity=0.055 Sum_probs=97.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+ ...++.++.+|++++++++++++.
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~---------- 101 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK---------- 101 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH----------
Confidence 6899999999999999999999999999999986544321 123567777888887777766643
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~ 140 (189)
+.+.++++|++|+++|.....+. .++|+.++ +.+++.++
T Consensus 102 --------------------------~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 155 (272)
T 1yb1_A 102 --------------------------VKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT 155 (272)
T ss_dssp --------------------------HHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 23445578999999886543221 23667774 44555566
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..++... +....|..+|...+.+.+
T Consensus 156 ~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~l~~ 192 (272)
T 1yb1_A 156 KNNHGHIVTVASAAGHVSV----PFLLAYCSSKFAAVGFHK 192 (272)
T ss_dssp HTTCEEEEEECCCC-CCCH----HHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEechhhcCCC----CCchhHHHHHHHHHHHHH
Confidence 6777899999998875421 223456667777766554
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=7.5e-16 Score=117.44 Aligned_cols=145 Identities=10% Similarity=0.025 Sum_probs=100.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+|+++||||+|+||++++++|+++| ++|++++|+++....+. ..++.++.+|++++++++++++..
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 73 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV--------- 73 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHH---------
Confidence 3689999999999999999999999 99999999876554321 346778888888888777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCC-CCC-----------CcceehhhHHHHHHHHH-
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRN-DLS-----------PTTVMSEGMKNIVTAMK- 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~-~~~-----------~~~~~~~~~~~ll~~~~- 140 (189)
.+.++ ++|++|+++|... ..+ ..++|+.++.++++++.
T Consensus 74 ---------------------------~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 126 (250)
T 1yo6_A 74 ---------------------------GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLP 126 (250)
T ss_dssp ---------------------------HHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred ---------------------------HHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33344 6888888888654 111 12367777776666553
Q ss_pred ---HC------C-----ccEEEEeccceeecCCCCC---CCCCccchhhHHHHHHHhh
Q psy3626 141 ---EY------N-----VSVVSVCLSAFLFYEPSKV---PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ---~~------~-----~~~~i~iSS~~~~~~~~~~---p~~~~~~~~~~~~~~~~l~ 181 (189)
+. + .++||++||..+....+.. +.....|..+|...+.+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~ 184 (250)
T 1yo6_A 127 LLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGR 184 (250)
T ss_dssp HHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHH
T ss_pred HHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHH
Confidence 33 4 6899999998776532111 1344567777777766654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.1e-16 Score=120.97 Aligned_cols=140 Identities=14% Similarity=0.055 Sum_probs=100.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~---------- 92 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA---------- 92 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH----------
Confidence 5899999999999999999999999999999986544321 124567778888888877776643
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH---
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE--- 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~--- 141 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++++..
T Consensus 93 --------------------------~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 146 (277)
T 2rhc_B 93 --------------------------VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGG 146 (277)
T ss_dssp --------------------------HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTC
T ss_pred --------------------------HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhh
Confidence 23445678999999986543211 24778887777776544
Q ss_pred ---CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 ---YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ---~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 147 m~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 185 (277)
T 2rhc_B 147 MLERGTGRIVNIASTGGKQGV----VHAAPYSASKHGVVGFTK 185 (277)
T ss_dssp HHHHTEEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhhcCCeEEEEECccccccCC----CCCccHHHHHHHHHHHHH
Confidence 367899999998765421 223457777777766554
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=123.10 Aligned_cols=141 Identities=13% Similarity=0.074 Sum_probs=99.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---------- 86 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT---------- 86 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH----------
Confidence 58999999999999999999999999999998754332210 125677788888877777666432
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--C-----------CcceehhhHHHHHHHHHH--
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--S-----------PTTVMSEGMKNIVTAMKE-- 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~-----------~~~~~~~~~~~ll~~~~~-- 141 (189)
.+.++++|++|+++|..... + ..++|+.++.++++++..
T Consensus 87 --------------------------~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 140 (278)
T 2bgk_A 87 --------------------------IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 140 (278)
T ss_dssp --------------------------HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33455789999998864321 0 123677787777776654
Q ss_pred --CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 --YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 --~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.++||++||..++... |.....|..+|...+.+.+
T Consensus 141 ~~~~~~~iv~isS~~~~~~~---~~~~~~Y~~sK~a~~~~~~ 179 (278)
T 2bgk_A 141 IPAKKGSIVFTASISSFTAG---EGVSHVYTATKHAVLGLTT 179 (278)
T ss_dssp GGGTCEEEEEECCGGGTCCC---TTSCHHHHHHHHHHHHHHH
T ss_pred hhcCCCeEEEEeeccccCCC---CCCCcchHHHHHHHHHHHH
Confidence 467899999998876532 2234457777877776655
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=120.68 Aligned_cols=140 Identities=13% Similarity=0.027 Sum_probs=92.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 85 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV--------- 85 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH---------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999986543321 1235667777777777776666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~---- 139 (189)
.+.+ +++|++||++|.....+ ..++|+.++.++++++
T Consensus 86 ---------------------------~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 138 (266)
T 1xq1_A 86 ---------------------------SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLL 138 (266)
T ss_dssp ---------------------------HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2334 67899999998643221 1247888887877766
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..++... +....|..+|...+.+.+
T Consensus 139 ~~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 176 (266)
T 1xq1_A 139 KASGCGNIIFMSSIAGVVSA----SVGSIYSATKGALNQLAR 176 (266)
T ss_dssp HHHSSCEEEEEC--------------CCHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEccchhccCC----CCCchHHHHHHHHHHHHH
Confidence 55677899999998876532 223457777777766554
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.8e-16 Score=121.25 Aligned_cols=140 Identities=13% Similarity=-0.008 Sum_probs=102.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~------------- 94 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEK------------- 94 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH-------------
Confidence 5899999999999999999999999999999986554332 235677888888888888877754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~ 143 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.+++ ++.+
T Consensus 95 -----------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~ 151 (277)
T 4dqx_A 95 -----------------------TTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG 151 (277)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT
T ss_pred -----------------------HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 34556789999999996543221 236777766555544 5566
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..+... .+....|..+|...+.+.+
T Consensus 152 ~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~ 185 (277)
T 4dqx_A 152 GGSIINTTSYTATSA----IADRTAYVASKGAISSLTR 185 (277)
T ss_dssp CEEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHH
T ss_pred CcEEEEECchhhCcC----CCCChhHHHHHHHHHHHHH
Confidence 789999999887542 1234457777777766554
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-16 Score=121.88 Aligned_cols=140 Identities=10% Similarity=0.033 Sum_probs=101.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++. .|+++..... ...++.++.+|++++++++++++.+
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------- 76 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQI-------- 76 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH--------
Confidence 579999999999999999999999999987 7765433321 1346778888888888888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
.+.+++.|++|+++|.....+. .++|+.++.++.+++
T Consensus 77 ----------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 128 (258)
T 3oid_A 77 ----------------------------DETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLM 128 (258)
T ss_dssp ----------------------------HHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4556788999999986543321 246777766665554
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+... .+....|..+|...+.+.+
T Consensus 129 ~~~~~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~ 166 (258)
T 3oid_A 129 EKNGGGHIVSISSLGSIRY----LENYTTVGVSKAALEALTR 166 (258)
T ss_dssp HTTTCEEEEEEEEGGGTSB----CTTCHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEECchhhCCC----CCCcHHHHHHHHHHHHHHH
Confidence 6666789999999877543 2234457777777776655
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.1e-16 Score=120.28 Aligned_cols=139 Identities=14% Similarity=0.053 Sum_probs=103.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+++||+++++.|+++|++|.+.+|+++...+. ...++..+++|++++++++++++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~-------------- 68 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEY-------------- 68 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHH--------------
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHH--------------
Confidence 5799999999999999999999999999999987655433 235678899999999999888754
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHHHHCCc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAMKEYNV 144 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~~~~~~ 144 (189)
+.+.+++.|++|+++|.....+. .++|+.++ +.+++.+++.+
T Consensus 69 ----------------------~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~- 125 (247)
T 3ged_A 69 ----------------------AMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK- 125 (247)
T ss_dssp ----------------------HHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred ----------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-
Confidence 35778899999999987654322 23666664 44555566655
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|.+||..+....+ ....|..+|..+..+.+
T Consensus 126 G~IInisS~~~~~~~~----~~~~Y~asKaal~~ltk 158 (247)
T 3ged_A 126 GRIINIASTRAFQSEP----DSEAYASAKGGIVALTH 158 (247)
T ss_dssp CEEEEECCGGGTSCCT----TCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeecccccCCC----CCHHHHHHHHHHHHHHH
Confidence 7999999988765322 23356777777765554
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=5.5e-16 Score=120.24 Aligned_cols=140 Identities=18% Similarity=0.143 Sum_probs=98.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~--------- 92 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA--------- 92 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH---------
Confidence 6899999999999999999999999999999986543321 123566777888888777776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.+++
T Consensus 93 ---------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 145 (267)
T 1vl8_A 93 ---------------------------VKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLL 145 (267)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 23455688999999986543221 236777776665544
Q ss_pred HHCCccEEEEeccce-eecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAF-LFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~-~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||.. +... .+....|..+|...+.+.+
T Consensus 146 ~~~~~g~iv~isS~~~~~~~----~~~~~~Y~asK~a~~~~~~ 184 (267)
T 1vl8_A 146 RESDNPSIINIGSLTVEEVT----MPNISAYAASKGGVASLTK 184 (267)
T ss_dssp TTCSSCEEEEECCGGGTCCC----SSSCHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEECCcchhccC----CCCChhHHHHHHHHHHHHH
Confidence 556678999999987 4321 1234457777777776554
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-16 Score=122.36 Aligned_cols=140 Identities=14% Similarity=0.080 Sum_probs=100.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+..+. ..++.++.+|++++++++++++.+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~---------- 91 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNL---------- 91 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTC----------
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHH----------
Confidence 57999999999999999999999999999999865443221 136778888888888888877665
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-CCC-----------cceehhhH----HHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-LSP-----------TTVMSEGM----KNIVTAMK 140 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-~~~-----------~~~~~~~~----~~ll~~~~ 140 (189)
.+.++++|++|+++|.... .+. .++|+.++ +.+++.++
T Consensus 92 --------------------------~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~ 145 (272)
T 2nwq_A 92 --------------------------PEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLI 145 (272)
T ss_dssp --------------------------CGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234567999999986542 111 23666674 44556666
Q ss_pred HCCcc-EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVS-VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~-~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+ +||++||..+.... +....|..+|...+.+.+
T Consensus 146 ~~~~g~~IV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 183 (272)
T 2nwq_A 146 AHGAGASIVNLGSVAGKWPY----PGSHVYGGTKAFVEQFSL 183 (272)
T ss_dssp HHCTTCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred hcCCCcEEEEeCCchhccCC----CCCchHHHHHHHHHHHHH
Confidence 66667 99999998775421 223457777877776665
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.3e-16 Score=118.44 Aligned_cols=140 Identities=15% Similarity=0.040 Sum_probs=88.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|+++ .|+++..... ...++.++.+|++++++++++++..
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 77 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTA-------- 77 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHH--------
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH--------
Confidence 589999999999999999999999999998 5554433221 1245677777887777776666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHH----H
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTA----M 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~----~ 139 (189)
.+.++++|++||++|...... ..++|+.++.++.++ +
T Consensus 78 ----------------------------~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 129 (247)
T 2hq1_A 78 ----------------------------MDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIM 129 (247)
T ss_dssp ----------------------------HHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ----------------------------HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 334457889999988643211 124677776555554 4
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 130 ~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 167 (247)
T 2hq1_A 130 LKQKSGKIINITSIAGIIGN----AGQANYAASKAGLIGFTK 167 (247)
T ss_dssp HHHTCEEEEEECC-------------CHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcChhhccCC----CCCcHhHHHHHHHHHHHH
Confidence 45567899999998665432 223457777777766554
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.2e-16 Score=118.92 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=98.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 84 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV--------- 84 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986543221 1235677777777777776666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-CCC-----------CcceehhhHHHHHHHHH---
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN-DLS-----------PTTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~-~~~-----------~~~~~~~~~~~ll~~~~--- 140 (189)
.+.++++|++||++|... ..+ ..++|+.++.++++++.
T Consensus 85 ---------------------------~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 137 (260)
T 3awd_A 85 ---------------------------HEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIM 137 (260)
T ss_dssp ---------------------------HHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 333457899999988654 111 12467778777766654
Q ss_pred -HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+....+. .+...|..+|...+.+.+
T Consensus 138 ~~~~~~~iv~~sS~~~~~~~~~--~~~~~Y~~sK~a~~~~~~ 177 (260)
T 3awd_A 138 LEQKQGVIVAIGSMSGLIVNRP--QQQAAYNASKAGVHQYIR 177 (260)
T ss_dssp HHHTCEEEEEECCGGGTSCCSS--SCCHHHHHHHHHHHHHHH
T ss_pred hhcCCCEEEEEecchhcccCCC--CCccccHHHHHHHHHHHH
Confidence 446689999999876543221 122457777877776655
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=117.49 Aligned_cols=135 Identities=13% Similarity=0.109 Sum_probs=99.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+. .+.++.+|++++++++++++.+
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~--------------- 81 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEI--------------- 81 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHH---------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHH---------------
Confidence 68999999999999999999999999999999876543 2678899999999988877543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----C------cceehhhHHHHHHH----HHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----P------TTVMSEGMKNIVTA----MKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~------~~~~~~~~~~ll~~----~~~~~~~~ 146 (189)
.+.++++|++|+++|.....+ . .++|+.++.+++++ +++.+.++
T Consensus 82 ---------------------~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~ 140 (253)
T 2nm0_A 82 ---------------------EETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGR 140 (253)
T ss_dssp ---------------------HHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred ---------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 445677899999998653221 1 23677776666554 44556789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..+.... +....|..+|...+.+.+
T Consensus 141 iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 171 (253)
T 2nm0_A 141 VVLISSVVGLLGS----AGQANYAASKAGLVGFAR 171 (253)
T ss_dssp EEEECCCCCCCCH----HHHHHHHHHHHHHHHHHH
T ss_pred EEEECchhhCCCC----CCcHHHHHHHHHHHHHHH
Confidence 9999998765421 123356667776665554
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.2e-16 Score=118.85 Aligned_cols=140 Identities=16% Similarity=0.063 Sum_probs=100.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+. +..... ...++.++.+|++++++++++++.
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~--------- 75 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKE--------- 75 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH---------
Confidence 5799999999999999999999999999988754 222211 124566777888888777776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++||++|.....+. .++|+.++.++++++
T Consensus 76 ---------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 128 (246)
T 3osu_A 76 ---------------------------VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQM 128 (246)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 24455688999999987543321 247888877777766
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 129 ~~~~~g~iv~isS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 166 (246)
T 3osu_A 129 LRQRSGAIINLSSVVGAVGNP----GQANYVATKAGVIGLTK 166 (246)
T ss_dssp HHHTCEEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEcchhhcCCCC----CChHHHHHHHHHHHHHH
Confidence 566678999999988765322 33457777777765554
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-16 Score=122.66 Aligned_cols=140 Identities=15% Similarity=0.026 Sum_probs=101.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+.+. ...++.++.+|++++++++++++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~------------- 95 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTA------------- 95 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHH-------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHH-------------
Confidence 5799999999999999999999999999999986654432 235677888888888888877754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHH----HHHHHHHC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKN----IVTAMKEY 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~----ll~~~~~~ 142 (189)
+.+.++++|++|+++|..... + ..++|+.++.+ +++.+++.
T Consensus 96 -----------------------~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 152 (272)
T 4dyv_A 96 -----------------------TVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQ 152 (272)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhC
Confidence 345567899999999975432 1 12367777444 45555655
Q ss_pred C--ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N--VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~--~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 153 ~~~~g~IV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 189 (272)
T 4dyv_A 153 EPRGGRIINNGSISATSPR----PYSAPYTATKHAITGLTK 189 (272)
T ss_dssp SSCCEEEEEECCSSTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECchhhcCCC----CCchHHHHHHHHHHHHHH
Confidence 4 4799999998876432 234457777777776655
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=117.39 Aligned_cols=138 Identities=13% Similarity=0.054 Sum_probs=100.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+|+||++++++|+++|++|++++|+++. ..... .. .++.+|++++++++++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~------------- 71 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEA------------- 71 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHH-------------
Confidence 579999999999999999999999999999998765 32211 13 67889999988888777543
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNV 144 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~ 144 (189)
.+.++++|++||++|.....+. .++|+.++.++++++ ++.+.
T Consensus 72 -----------------------~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~ 128 (256)
T 2d1y_A 72 -----------------------AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG 128 (256)
T ss_dssp -----------------------HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC
T ss_pred -----------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 3456688999999986543211 236777776665554 45667
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..+.... +....|..+|...+.+.+
T Consensus 129 g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 161 (256)
T 2d1y_A 129 GAIVNVASVQGLFAE----QENAAYNASKGGLVNLTR 161 (256)
T ss_dssp EEEEEECCGGGTSBC----TTBHHHHHHHHHHHHHHH
T ss_pred cEEEEEccccccCCC----CCChhHHHHHHHHHHHHH
Confidence 899999998765432 223457777777766654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=6.4e-16 Score=119.81 Aligned_cols=140 Identities=15% Similarity=-0.023 Sum_probs=101.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~---------- 74 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA---------- 74 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999987654432 134567788888888888777653
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~~~ 140 (189)
+.+.++++|++|+++|.....+. .++|+.++.++ ++.++
T Consensus 75 --------------------------~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 128 (264)
T 3tfo_A 75 --------------------------AVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIME 128 (264)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34556789999999997543321 23677776544 44555
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 129 ~~~~g~IV~isS~~~~~~~----~~~~~Y~asKaal~~l~~ 165 (264)
T 3tfo_A 129 AQRSGQIINIGSIGALSVV----PTAAVYCATKFAVRAISD 165 (264)
T ss_dssp HHTCEEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHH
T ss_pred hCCCeEEEEEcCHHHcccC----CCChhHHHHHHHHHHHHH
Confidence 6667899999998876532 223456777777665554
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.9e-16 Score=122.12 Aligned_cols=142 Identities=15% Similarity=0.073 Sum_probs=102.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+++...+. ...++.++.+|++++++++++++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~---------- 98 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRD---------- 98 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999986554322 134677888888888888777754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++|+++|..... + ..++|+.++.++.+++
T Consensus 99 --------------------------~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 152 (283)
T 3v8b_A 99 --------------------------LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYL 152 (283)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345567899999999964321 1 1247777776666655
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+ .+....|..+|...+.+.+
T Consensus 153 ~~~~~g~Iv~isS~~~~~~~~--~~~~~~Y~asKaa~~~l~~ 192 (283)
T 3v8b_A 153 KQRGGGAIVVVSSINGTRTFT--TPGATAYTATKAAQVAIVQ 192 (283)
T ss_dssp HHHTCEEEEEECCSBTTTBCC--STTCHHHHHHHHHHHHHHH
T ss_pred HHcCCceEEEEcChhhccCCC--CCCchHHHHHHHHHHHHHH
Confidence 666678999999987654211 1234457777877776655
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.5e-16 Score=121.58 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+. +..... ...++.++.+|++++++++++++.
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-------- 97 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM-------- 97 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH--------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH--------
Confidence 5799999999999999999999999999999843 222111 135677788888888887777653
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~--- 139 (189)
+.+.++++|++|+++|....... .++|+.++.++++++
T Consensus 98 ----------------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 149 (281)
T 3v2h_A 98 ----------------------------VADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPP 149 (281)
T ss_dssp ----------------------------HHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34556688999999997543321 236777776666654
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 150 ~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 188 (281)
T 3v2h_A 150 MKKKGWGRIINIASAHGLVAS----PFKSAYVAAKHGIMGLTK 188 (281)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECCcccccCC----CCchHHHHHHHHHHHHHH
Confidence 56667899999998876432 223457777777766554
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.65 E-value=8e-16 Score=118.93 Aligned_cols=140 Identities=15% Similarity=0.030 Sum_probs=102.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------------- 93 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLL-------------- 93 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHH--------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHH--------------
Confidence 5799999999999999999999999999999987654321 2234778889999988888777543
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhHHHHHHHH----HHCCccE
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGMKNIVTAM----KEYNVSV 146 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~~~ll~~~----~~~~~~~ 146 (189)
.+.++++|++|+++|....... .++|+.++.++.+++ ++.+.++
T Consensus 94 ----------------------~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~ 151 (260)
T 3gem_A 94 ----------------------KTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVAD 151 (260)
T ss_dssp ----------------------HHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCE
T ss_pred ----------------------HHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 4556678999999986543321 236777766665544 5566789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..+.... +....|..+|...+.+.+
T Consensus 152 iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 182 (260)
T 3gem_A 152 IVHISDDVTRKGS----SKHIAYCATKAGLESLTL 182 (260)
T ss_dssp EEEECCGGGGTCC----SSCHHHHHHHHHHHHHHH
T ss_pred EEEECChhhcCCC----CCcHhHHHHHHHHHHHHH
Confidence 9999998876532 233457777777766655
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=6.2e-16 Score=117.85 Aligned_cols=136 Identities=15% Similarity=0.060 Sum_probs=92.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+|+||++++++|+++|++|++++|+++...+.. ..+.+++.+|++++++++++++..
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------- 74 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI------------- 74 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC-------------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHc-------------
Confidence 58999999999999999999999999999999865433221 123455667777766666555421
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH----HCC-
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK----EYN- 143 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~----~~~- 143 (189)
+++|++||++|.....+ ..++|+.++.++++++. +.+
T Consensus 75 ---------------------------~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 127 (244)
T 1cyd_A 75 ---------------------------GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV 127 (244)
T ss_dssp ---------------------------CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ---------------------------CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC
Confidence 24688888887543221 12367888777666554 335
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..++... +....|..+|...+.+.+
T Consensus 128 ~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 161 (244)
T 1cyd_A 128 PGSIVNVSSMVAHVTF----PNLITYSSTKGAMTMLTK 161 (244)
T ss_dssp CEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcchhhcCCC----CCcchhHHHHHHHHHHHH
Confidence 6899999998775431 234457777877776665
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.5e-16 Score=120.91 Aligned_cols=137 Identities=13% Similarity=0.041 Sum_probs=93.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---------- 79 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADR---------- 79 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH----------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH----------
Confidence 5899999999999999999999999999999986554432 134567788888888877776643
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC---C-----C------Ccceehhh----HHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND---L-----S------PTTVMSEG----MKNIVT 137 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~---~-----~------~~~~~~~~----~~~ll~ 137 (189)
+.+.++++|++|+++|.... . . ..++|+.+ ++.+++
T Consensus 80 --------------------------~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 133 (253)
T 3qiv_A 80 --------------------------TLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYK 133 (253)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 24455688999999986321 1 1 12467777 566666
Q ss_pred HHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+.++||++||..++.. ...|..+|...+.+.+
T Consensus 134 ~~~~~~~g~iv~isS~~~~~~-------~~~Y~asK~a~~~~~~ 170 (253)
T 3qiv_A 134 KMTKRGGGAIVNQSSTAAWLY-------SNYYGLAKVGINGLTQ 170 (253)
T ss_dssp HHHHHTCEEEEEECC------------------CCHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCccccCC-------CchhHHHHHHHHHHHH
Confidence 777777789999999987631 2236667776665554
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.1e-16 Score=117.45 Aligned_cols=141 Identities=18% Similarity=0.049 Sum_probs=98.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 74 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKV------- 74 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-H-------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHH-------
Confidence 78999999999999999999999999999999986554321 1346777888888888877766543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH-
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE- 141 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~- 141 (189)
.+.++++|++|+++|.....+. .++|+.++.++++++..
T Consensus 75 -----------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 125 (235)
T 3l77_A 75 -----------------------------LERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDS 125 (235)
T ss_dssp -----------------------------HHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -----------------------------HHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455688999999987543321 24777787776666543
Q ss_pred --CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 --YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 --~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 126 ~~~~~~~ii~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~ 163 (235)
T 3l77_A 126 LKRTGGLALVTTSDVSARLI----PYGGGYVSTKWAARALVR 163 (235)
T ss_dssp HHHHTCEEEEECCGGGSSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhhcCCcEEEEecchhcccC----CCcchHHHHHHHHHHHHH
Confidence 233577888887665422 223356667777665554
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.8e-16 Score=118.61 Aligned_cols=140 Identities=14% Similarity=-0.022 Sum_probs=101.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~---------- 99 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG---------- 99 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH----------
Confidence 5899999999999999999999999999999987654432 134677888888888888777754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNIVTA----M 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~ll~~----~ 139 (189)
+.+.++++|++|+++|..... . ..++|+.++.+++++ +
T Consensus 100 --------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 153 (262)
T 3rkr_A 100 --------------------------VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAM 153 (262)
T ss_dssp --------------------------HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345567789999999873221 1 123677776665555 4
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... .....|..+|...+.+.+
T Consensus 154 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 191 (262)
T 3rkr_A 154 IAAKRGHIINISSLAGKNPV----ADGAAYTASKWGLNGLMT 191 (262)
T ss_dssp HHTTCCEEEEECSSCSSCCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhCCCceEEEEechhhcCCC----CCCchHHHHHHHHHHHHH
Confidence 55677899999998876432 233457777776665544
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=119.79 Aligned_cols=141 Identities=14% Similarity=0.026 Sum_probs=101.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------------cCCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------------YHSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------------~~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
|+++||||+|+||++++++|+++|++|++++|+++...++ ...++.++.+|++++++++++++.
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~--- 86 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK--- 86 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH---
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH---
Confidence 5899999999999999999999999999999998754432 124566777777777777766643
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~ 137 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.+
T Consensus 87 ---------------------------------~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 133 (285)
T 3sc4_A 87 ---------------------------------TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQ 133 (285)
T ss_dssp ---------------------------------HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 24455689999999997643321 2377888777777
Q ss_pred HHHH----CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKE----YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~----~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.. .+.+++|++||..+.... +.....|..+|...+.+.+
T Consensus 134 ~~~~~m~~~~~g~iv~isS~~~~~~~---~~~~~~Y~asKaal~~~~~ 178 (285)
T 3sc4_A 134 SCIPHMKGRDNPHILTLSPPIRLEPK---WLRPTPYMMAKYGMTLCAL 178 (285)
T ss_dssp HHGGGTTTSSSCEEEECCCCCCCSGG---GSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEECChhhccCC---CCCCchHHHHHHHHHHHHH
Confidence 6643 356799999998765421 1223457777777765554
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=116.16 Aligned_cols=139 Identities=8% Similarity=0.012 Sum_probs=102.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++... ....++.+|++++++++++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~--------------- 68 (241)
T 1dhr_A 8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEV--------------- 68 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHH---------------
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHH---------------
Confidence 58999999999999999999999999999999876543 23567889999999888777532
Q ss_pred CccccCceeEEeccccCHHHHHHHh--cCCCEEEEeeccCCCCCC------------cceehhhHHHHHHHHHHC--Ccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAI--EGKDGVVVALGTRNDLSP------------TTVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~ll~~~~~~--~~~ 145 (189)
.+.+ +++|++|+++|.....+. .++|+.++.++.+++... ..+
T Consensus 69 ---------------------~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g 127 (241)
T 1dhr_A 69 ---------------------GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 127 (241)
T ss_dssp ---------------------HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred ---------------------HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCC
Confidence 3444 578999999986432211 236777888887777653 236
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhhcC
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSG 184 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~ 184 (189)
+||++||..+.... +....|..+|...+.+.+...
T Consensus 128 ~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~~la 162 (241)
T 1dhr_A 128 LLTLAGAKAALDGT----PGMIGYGMAKGAVHQLCQSLA 162 (241)
T ss_dssp EEEEECCGGGGSCC----TTBHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCHHHccCC----CCchHHHHHHHHHHHHHHHHH
Confidence 99999998876431 233457777887777766443
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4.8e-16 Score=119.90 Aligned_cols=140 Identities=15% Similarity=0.040 Sum_probs=101.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~------------- 75 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAA------------- 75 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHH-------------
Confidence 5799999999999999999999999999999986554332 234567888888888887777653
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH----HCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK----EYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~----~~~ 143 (189)
+.+.++++|++||++|.....+. .++|+.++.++++++. +.+
T Consensus 76 -----------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 132 (259)
T 4e6p_A 76 -----------------------TVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQG 132 (259)
T ss_dssp -----------------------HHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 24455688999999987543321 2377777777666553 333
Q ss_pred -ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 -VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 -~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..++... +....|..+|...+.+.+
T Consensus 133 ~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 167 (259)
T 4e6p_A 133 RGGKIINMASQAGRRGE----ALVAIYCATKAAVISLTQ 167 (259)
T ss_dssp SCEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECChhhccCC----CCChHHHHHHHHHHHHHH
Confidence 4699999998876532 234457777877776655
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-16 Score=122.10 Aligned_cols=140 Identities=18% Similarity=0.061 Sum_probs=99.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc---CCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+..+. ..++.++.+|++++++++++++...
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~----------- 69 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLP----------- 69 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSC-----------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHH-----------
Confidence 58999999999999999999999999999999865443321 2457788888888888887776541
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-CC-----------CcceehhhHHHHHHH----HHHC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-LS-----------PTTVMSEGMKNIVTA----MKEY 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-~~-----------~~~~~~~~~~~ll~~----~~~~ 142 (189)
+.++++|++||++|.... .+ ..++|+.++.++.++ +++.
T Consensus 70 -------------------------~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 124 (248)
T 3asu_A 70 -------------------------AEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER 124 (248)
T ss_dssp -------------------------TTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred -------------------------HhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 224568999999986421 11 123677775555544 4455
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..+.... +....|..+|...+.+.+
T Consensus 125 ~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 159 (248)
T 3asu_A 125 NHGHIINIGSTAGSWPY----AGGNVYGATKAFVRQFSL 159 (248)
T ss_dssp TCCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEccchhccCC----CCCchHHHHHHHHHHHHH
Confidence 66899999998875421 223457777877776655
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=118.91 Aligned_cols=142 Identities=17% Similarity=0.113 Sum_probs=102.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~---------- 102 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ---------- 102 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH----------
Confidence 6899999999999999999999999999999987665432 124677788888888887777653
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
+.+.++++|++|+++|....... .++|+.++.++++++ +
T Consensus 103 --------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 156 (276)
T 3r1i_A 103 --------------------------MTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMV 156 (276)
T ss_dssp --------------------------HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556689999999987654321 136777766665554 4
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||..+... ..+.....|..+|...+.+.+
T Consensus 157 ~~~~~g~iv~isS~~~~~~--~~~~~~~~Y~asKaa~~~l~~ 196 (276)
T 3r1i_A 157 DQGLGGTIITTASMSGHII--NIPQQVSHYCTSKAAVVHLTK 196 (276)
T ss_dssp HHTSCEEEEEECCGGGTSC--CCSSCCHHHHHHHHHHHHHHH
T ss_pred HcCCCcEEEEECchHhccc--CCCCCcchHHHHHHHHHHHHH
Confidence 444 379999999876542 223345567777877776655
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-15 Score=114.87 Aligned_cols=135 Identities=12% Similarity=0.073 Sum_probs=96.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+. .+.+|++++++++++++..
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~D~~~~~~~~~~~~~~--------------- 75 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAV--------------- 75 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-----CeeccCCCHHHHHHHHHHH---------------
Confidence 58999999999999999999999999999999877655432 3789999999888877543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----HHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----KEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~~~~~~~ 146 (189)
.+.++++|++|+++|.....+ ..++|+.++.++++++ ++.+.++
T Consensus 76 ---------------------~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~ 134 (247)
T 1uzm_A 76 ---------------------EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGR 134 (247)
T ss_dssp ---------------------HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred ---------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCE
Confidence 445677899999998654321 1236777766665544 4567789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+.... +....|..+|...+.+.+
T Consensus 135 iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (247)
T 1uzm_A 135 MIFIGSVSGLWGI----GNQANYAASKAGVIGMAR 165 (247)
T ss_dssp EEEECCCCC---------CCHHHHHHHHHHHHHHH
T ss_pred EEEECCHhhccCC----CCChhHHHHHHHHHHHHH
Confidence 9999998776432 223456777776665554
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.3e-16 Score=118.47 Aligned_cols=140 Identities=9% Similarity=-0.042 Sum_probs=102.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~---------- 82 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA---------- 82 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH----------
Confidence 5899999999999999999999999999999986544322 134677788888888887777653
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhHHHHHHH----HHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGMKNIVTA----MKE 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~~~ll~~----~~~ 141 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.++ +++
T Consensus 83 --------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 136 (256)
T 3gaf_A 83 --------------------------ALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQK 136 (256)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 34556688999999986543221 23677776666655 456
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 137 ~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 172 (256)
T 3gaf_A 137 AGGGAILNISSMAGENTN----VRMASYGSSKAAVNHLTR 172 (256)
T ss_dssp TTCEEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEcCHHHcCCC----CCchHHHHHHHHHHHHHH
Confidence 667899999998876432 234457777777766655
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=7.1e-16 Score=118.91 Aligned_cols=140 Identities=16% Similarity=0.047 Sum_probs=98.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~---------- 84 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM---------- 84 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999986543321 123466777787777777666643
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-CC-----------CcceehhhHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-LS-----------PTTVMSEGMKNIVTA----M 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-~~-----------~~~~~~~~~~~ll~~----~ 139 (189)
+.+.++++|++|+++|.... .+ ..++|+.++.+++++ +
T Consensus 85 --------------------------~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 138 (260)
T 2zat_A 85 --------------------------AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEM 138 (260)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 23445678999999986431 11 123677776555554 5
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..++... +....|..+|...+.+.+
T Consensus 139 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 176 (260)
T 2zat_A 139 EKRGGGSVLIVSSVGAYHPF----PNLGPYNVSKTALLGLTK 176 (260)
T ss_dssp HHTTCEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEechhhcCCC----CCchhHHHHHHHHHHHHH
Confidence 56777899999998876431 233457777777776655
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.65 E-value=4.2e-16 Score=119.60 Aligned_cols=140 Identities=12% Similarity=0.028 Sum_probs=102.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...+..++.+|++++++++++++.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~------------- 76 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKA------------- 76 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHH-------------
Confidence 5799999999999999999999999999999986554432 224567788888888888777754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~ 143 (189)
+.+.+++.|++||++|.....+. .++|+.++.++.+++ ++.+
T Consensus 77 -----------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~ 133 (248)
T 3op4_A 77 -----------------------ITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR 133 (248)
T ss_dssp -----------------------HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 34556789999999997654321 236777766665554 4566
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|...+.+.+
T Consensus 134 ~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~ 167 (248)
T 3op4_A 134 QGRIINVGSVVGTMGN----AGQANYAAAKAGVIGFTK 167 (248)
T ss_dssp CEEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcchhhcCCC----CCChHHHHHHHHHHHHHH
Confidence 6899999998876532 233457777777665554
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=6e-16 Score=118.01 Aligned_cols=140 Identities=12% Similarity=-0.001 Sum_probs=98.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
|+++||||+|+||++++++|+++|+ +|++++|+++....+ ...++.++.+|++++++++++++.
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--- 79 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTH--- 79 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH---
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH---
Confidence 6799999999999999999999999 899999986544321 124567777788877777766643
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~ 137 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++
T Consensus 80 ---------------------------------~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (244)
T 2bd0_A 80 ---------------------------------IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ 126 (244)
T ss_dssp ---------------------------------HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ---------------------------------HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence 23344578999999886543211 2367777777666
Q ss_pred HH----HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AM----KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~----~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++ ++.+.++||++||..++... +....|..+|...+.+.+
T Consensus 127 ~~~~~~~~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 170 (244)
T 2bd0_A 127 ALFALMERQHSGHIFFITSVAATKAF----RHSSIYCMSKFGQRGLVE 170 (244)
T ss_dssp HHHHHHHHHTCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEecchhcCCC----CCCchhHHHHHHHHHHHH
Confidence 65 44567899999998876432 233457777777765553
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.1e-16 Score=114.37 Aligned_cols=124 Identities=19% Similarity=0.115 Sum_probs=92.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|++|++++++|+ +|++|++++|+++ .+.+|++++++++++++..
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--------------- 56 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--------------- 56 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH---------------
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh---------------
Confidence 589999999999999999999 9999999999864 4678999988887776541
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC---CccEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY---NVSVV 147 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~---~~~~~ 147 (189)
+++|++|+++|.....+. .++|+.++.++++++.+. + +++
T Consensus 57 -------------------------~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i 110 (202)
T 3d7l_A 57 -------------------------GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSF 110 (202)
T ss_dssp -------------------------CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEE
T ss_pred -------------------------CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEE
Confidence 245677777764322111 246888999999988765 3 799
Q ss_pred EEeccceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 148 SVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 148 i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
|++||..+... .+....|...|...+.+.+.
T Consensus 111 v~~sS~~~~~~----~~~~~~Y~~sK~~~~~~~~~ 141 (202)
T 3d7l_A 111 TLTTGIMMEDP----IVQGASAAMANGAVTAFAKS 141 (202)
T ss_dssp EEECCGGGTSC----CTTCHHHHHHHHHHHHHHHH
T ss_pred EEEcchhhcCC----CCccHHHHHHHHHHHHHHHH
Confidence 99999876432 12334577788888777764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=9.6e-16 Score=117.99 Aligned_cols=140 Identities=16% Similarity=0.093 Sum_probs=96.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--------- 73 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA--------- 73 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH---------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH---------
Confidence 6799999999999999999999999999999986544321 1235667778888877777766432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~~ 140 (189)
.+.++++|++|+++|.....+. .++|+.++.+ +++.++
T Consensus 74 ---------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 126 (256)
T 1geg_A 74 ---------------------------RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFK 126 (256)
T ss_dssp ---------------------------HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3445678999999986543221 2356666544 444555
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||..+.... +....|..+|...+.+.+
T Consensus 127 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 164 (256)
T 1geg_A 127 KEGHGGKIINACSQAGHVGN----PELAVYSSSKFAVRGLTQ 164 (256)
T ss_dssp HHTSCEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred hcCCCCEEEEECchhhcCCC----CCchhHHHHHHHHHHHHH
Confidence 555 6799999998765432 223457777777766554
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=8.6e-16 Score=119.95 Aligned_cols=141 Identities=13% Similarity=-0.006 Sum_probs=102.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Ccc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++.. ... ...++.++.+|++++++++++++.
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 100 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE--------- 100 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986431 110 134567788888888877776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.++++|++||++|.....+ ..++|+.++.++++++...
T Consensus 101 ---------------------------~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 153 (283)
T 1g0o_A 101 ---------------------------AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL 153 (283)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS
T ss_pred ---------------------------HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2345668899999998654321 1347888888888888764
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++|++||..+... .+.....|..+|...+.+.+
T Consensus 154 ~~~g~iv~isS~~~~~~---~~~~~~~Y~asK~a~~~~~~ 190 (283)
T 1g0o_A 154 EIGGRLILMGSITGQAK---AVPKHAVYSGSKGAIETFAR 190 (283)
T ss_dssp CTTCEEEEECCGGGTCS---SCSSCHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEechhhccC---CCCCCcchHHHHHHHHHHHH
Confidence 5679999999876542 12224457777777766554
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.1e-16 Score=121.36 Aligned_cols=140 Identities=16% Similarity=0.045 Sum_probs=98.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 80 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV------- 80 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH-------
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHH-------
Confidence 4799999999999999999999999999999986443211 1235677888888888877776543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---Ccceehh----hHHHHHHHHHHCC---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---PTTVMSE----GMKNIVTAMKEYN--- 143 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---~~~~~~~----~~~~ll~~~~~~~--- 143 (189)
.+.++++|++|+++|...... ..++|+. .++.+++.+++.+
T Consensus 81 -----------------------------~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 131 (267)
T 2gdz_A 81 -----------------------------VDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGE 131 (267)
T ss_dssp -----------------------------HHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC
T ss_pred -----------------------------HHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCC
Confidence 345667899999999654321 1235655 4566777776653
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..++... +....|..+|...+.+.+
T Consensus 132 ~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (267)
T 2gdz_A 132 GGIIINMSSLAGLMPV----AQQPVYCASKHGIVGFTR 165 (267)
T ss_dssp CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccccCCC----CCCchHHHHHHHHHHHHH
Confidence 5799999998876532 223356667776665543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.4e-16 Score=116.76 Aligned_cols=137 Identities=15% Similarity=0.036 Sum_probs=95.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++....
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--------- 71 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS--------- 71 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS---------
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh---------
Confidence 88999999999999999999999999999999987654432 234567778888888877777765521
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH----C
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE----Y 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~----~ 142 (189)
..|++|+++|.....+. .++|+.++.++++++.. .
T Consensus 72 ------------------------------~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 121 (230)
T 3guy_A 72 ------------------------------IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ 121 (230)
T ss_dssp ------------------------------CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ------------------------------cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 12778888875443221 24677777777666543 3
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .++|++||..+... .+....|..+|...+.+.+
T Consensus 122 ~-~~iv~isS~~~~~~----~~~~~~Y~asKaa~~~~~~ 155 (230)
T 3guy_A 122 P-VNVVMIMSTAAQQP----KAQESTYCAVKWAVKGLIE 155 (230)
T ss_dssp C-CEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHH
T ss_pred C-CeEEEEeecccCCC----CCCCchhHHHHHHHHHHHH
Confidence 3 39999999887643 2234457777777766554
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=4.5e-16 Score=121.66 Aligned_cols=140 Identities=16% Similarity=0.028 Sum_probs=96.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~--------- 115 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI--------- 115 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999988875443321 1235667777777777776666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHH----HHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNI----VTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~l----l~~~~ 140 (189)
.+.++++|++|+++|.....+ ..++|+.++.++ ++.++
T Consensus 116 ---------------------------~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 168 (285)
T 2c07_A 116 ---------------------------LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI 168 (285)
T ss_dssp ---------------------------HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 334457899999988654321 123677775444 44455
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 169 ~~~~~~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 205 (285)
T 2c07_A 169 NNRYGRIINISSIVGLTGN----VGQANYSSSKAGVIGFTK 205 (285)
T ss_dssp HHTCEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred hCCCCEEEEECChhhccCC----CCCchHHHHHHHHHHHHH
Confidence 5677899999998776532 223456777776665544
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-15 Score=117.71 Aligned_cols=140 Identities=16% Similarity=0.090 Sum_probs=97.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC--CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR--LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++. .... ...++.++.+|++++++++++++.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-------- 74 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDE-------- 74 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH--------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH--------
Confidence 689999999999999999999999999999998654 3221 124567777888887777766643
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~--- 139 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++++
T Consensus 75 ----------------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 126 (258)
T 3a28_C 75 ----------------------------AAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRK 126 (258)
T ss_dssp ----------------------------HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 23445688999999986543221 236666665555544
Q ss_pred -HHCCc-cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNV-SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~-~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+. ++||++||..+.... +....|..+|...+.+.+
T Consensus 127 ~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 166 (258)
T 3a28_C 127 FDELGVKGKIINAASIAAIQGF----PILSAYSTTKFAVRGLTQ 166 (258)
T ss_dssp HHHHTCCCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEECcchhccCC----CCchhHHHHHHHHHHHHH
Confidence 44565 899999998765431 223457777777765554
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-15 Score=117.21 Aligned_cols=139 Identities=18% Similarity=0.069 Sum_probs=98.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~---------- 77 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS---------- 77 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH----------
Confidence 5899999999999999999999999999999986544322 124567778888888877776643
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.+++ +
T Consensus 78 --------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 131 (247)
T 2jah_A 78 --------------------------TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLL 131 (247)
T ss_dssp --------------------------HHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 23455688999999986543211 236777766665554 4
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ +++|++||..+.... +....|..+|...+.+.+
T Consensus 132 ~~~-g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 167 (247)
T 2jah_A 132 RSK-GTVVQMSSIAGRVNV----RNAAVYQATKFGVNAFSE 167 (247)
T ss_dssp HHT-CEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHH
T ss_pred HCC-CEEEEEccHHhcCCC----CCCcHHHHHHHHHHHHHH
Confidence 456 899999998775421 223356667766655443
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=8.2e-16 Score=119.53 Aligned_cols=140 Identities=16% Similarity=0.061 Sum_probs=99.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.+
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 92 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV--------- 92 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH---------
Confidence 5799999999999999999999999999999986544321 1235677778888877777666432
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
.+.+ ++.|++|+++|.....+. .++|+.++.++.+++
T Consensus 93 ---------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m 145 (273)
T 1ae1_A 93 ---------------------------AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLL 145 (273)
T ss_dssp ---------------------------HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444 678999999986543221 126777776666655
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..++... +....|..+|...+.+.+
T Consensus 146 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 183 (273)
T 1ae1_A 146 KASQNGNVIFLSSIAGFSAL----PSVSLYSASKGAINQMTK 183 (273)
T ss_dssp HHHTSEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcCHhhcCCC----CCcchhHHHHHHHHHHHH
Confidence 45566899999998876532 223457777777765554
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-15 Score=116.03 Aligned_cols=144 Identities=14% Similarity=0.071 Sum_probs=100.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC---CcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG---LEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
||+++||||+|+||++++++|+++| ++|++++|+++....+. ..++.++.+|++++++++++++..
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~------ 94 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI------ 94 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH------
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHH------
Confidence 5789999999999999999999999 99999999877654321 246777888888887777766432
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCC-CCC-----------CcceehhhHHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRN-DLS-----------PTTVMSEGMKNIVTA 138 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~-~~~-----------~~~~~~~~~~~ll~~ 138 (189)
.+.++ ++|++|+++|... ... ..++|+.++.+++++
T Consensus 95 ------------------------------~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 144 (267)
T 1sny_A 95 ------------------------------EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKA 144 (267)
T ss_dssp ------------------------------HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ------------------------------HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHH
Confidence 33344 6889999988654 111 123677777777666
Q ss_pred HHH----C------C-----ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKE----Y------N-----VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~----~------~-----~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.. . + .++||++||..++...+.. .....|..+|...+.+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~ 201 (267)
T 1sny_A 145 CLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD-GGMYAYRTSKSALNAATK 201 (267)
T ss_dssp HHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCS-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccccccccCCCceEEEEecccccccCCCC-CCchHHHHHHHHHHHHHH
Confidence 643 2 2 4799999998876532211 234457777777766554
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.6e-16 Score=122.02 Aligned_cols=140 Identities=11% Similarity=0.116 Sum_probs=101.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cC---CceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YH---SKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... .. .++.++.+|++++++++++++.+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~------ 85 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV------ 85 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH------
Confidence 5899999999999999999999999999999986544321 01 25778888888888887777543
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHHHHHH-
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNIVTAM- 139 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~ll~~~- 139 (189)
.+.+++.|++||++|..... + ..++|+.++.++++++
T Consensus 86 ------------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~ 135 (281)
T 3svt_A 86 ------------------------------TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAA 135 (281)
T ss_dssp ------------------------------HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45567889999999963221 1 1236777776666654
Q ss_pred ---HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ---KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ---~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 136 ~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~ 176 (281)
T 3svt_A 136 REMVRGGGGSFVGISSIAASNTH----RWFGAYGVTKSAVDHLMQ 176 (281)
T ss_dssp HHHHHTTCEEEEEECCHHHHSCC----TTCTHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEEEeCHHHcCCC----CCChhHHHHHHHHHHHHH
Confidence 45556799999998876532 223457777877776655
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-15 Score=116.15 Aligned_cols=139 Identities=17% Similarity=0.126 Sum_probs=97.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++...+.. ++.++.+|+++ ++++++++.
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~D~~~-~~~~~~~~~---------------- 63 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL--GAVPLPTDLEK-DDPKGLVKR---------------- 63 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH--TCEEEECCTTT-SCHHHHHHH----------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh--CcEEEecCCch-HHHHHHHHH----------------
Confidence 68999999999999999999999999999999875422111 26778888888 777666543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH----HHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT----AMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~----~~~~~~~~~ 146 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.+ .+++.+.++
T Consensus 64 --------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~ 123 (239)
T 2ekp_A 64 --------------------ALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGR 123 (239)
T ss_dssp --------------------HHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred --------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence 23456678999999986543221 1256666555544 445667789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..++... .++....|..+|...+.+.+
T Consensus 124 iv~isS~~~~~~~--~~~~~~~Y~~sK~a~~~~~~ 156 (239)
T 2ekp_A 124 VLFIGSVTTFTAG--GPVPIPAYTTAKTALLGLTR 156 (239)
T ss_dssp EEEECCGGGTSCC--TTSCCHHHHHHHHHHHHHHH
T ss_pred EEEECchhhccCC--CCCCCccHHHHHHHHHHHHH
Confidence 9999998876532 12344567777777765554
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.8e-16 Score=119.19 Aligned_cols=140 Identities=15% Similarity=0.071 Sum_probs=102.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------------- 73 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAE------------- 73 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHH-------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH-------------
Confidence 6899999999999999999999999999999987554432 235678888899988888877754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH----HHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA----MKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~----~~~~~ 143 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.++ +++.+
T Consensus 74 -----------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 130 (247)
T 3rwb_A 74 -----------------------IQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAG 130 (247)
T ss_dssp -----------------------HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 34556789999999987543321 23677776666555 66655
Q ss_pred -ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 -VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 -~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 131 ~~g~iv~isS~~~~~~~~----~~~~Y~asKaa~~~~~~ 165 (247)
T 3rwb_A 131 KAGRVISIASNTFFAGTP----NMAAYVAAKGGVIGFTR 165 (247)
T ss_dssp CCEEEEEECCTHHHHTCT----TCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECchhhccCCC----CchhhHHHHHHHHHHHH
Confidence 68999999988765322 23457777777665554
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.9e-16 Score=119.30 Aligned_cols=140 Identities=14% Similarity=0.011 Sum_probs=96.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------C-------CceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------H-------SKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~-------~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
++++||||+|+||++++++|+++|++|++++|+++....+. . .++.++.+|++++++++++++.+
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-- 85 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV-- 85 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH--
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH--
Confidence 57999999999999999999999999999999865432210 1 34566777777777766665432
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCC-CEEEEeeccCCCCC-----------CcceehhhHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGK-DGVVVALGTRNDLS-----------PTTVMSEGMKNIV 136 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll 136 (189)
.+.+++. |++||++|.....+ ..++|+.++.+++
T Consensus 86 ----------------------------------~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 131 (264)
T 2pd6_A 86 ----------------------------------QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVT 131 (264)
T ss_dssp ----------------------------------HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----------------------------------HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHH
Confidence 3344566 99999998654321 1247788887777
Q ss_pred HHHHH----CC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 TAMKE----YN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 ~~~~~----~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.. .+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 132 ~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 177 (264)
T 2pd6_A 132 QAAAQALVSNGCRGSIINISSIVGKVGN----VGQTNYAASKAGVIGLTQ 177 (264)
T ss_dssp HHHHHHHHHHTCCEEEEEECCTHHHHCC----TTBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEECChhhccCC----CCChhhHHHHHHHHHHHH
Confidence 76643 34 5799999998765532 223457777777665554
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.2e-16 Score=121.21 Aligned_cols=140 Identities=14% Similarity=0.125 Sum_probs=101.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~------------ 84 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV------------ 84 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC------------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc------------
Confidence 5899999999999999999999999999999986554322 2345677777777777776666533
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---------CcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---------PTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---------~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
+++|++|+++|...+.. ..++|+.++.++++++.....+|||+
T Consensus 85 ----------------------------~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~ 136 (291)
T 3rd5_A 85 ----------------------------SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVT 136 (291)
T ss_dssp ----------------------------CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred ----------------------------CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeE
Confidence 24588888888643221 13589999999999998887779999
Q ss_pred eccceeecCCCCC---------CCCCccchhhHHHHHHHhh
Q psy3626 150 CLSAFLFYEPSKV---------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 150 iSS~~~~~~~~~~---------p~~~~~~~~~~~~~~~~l~ 181 (189)
+||..++...... ......|..+|...+.+.+
T Consensus 137 isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~ 177 (291)
T 3rd5_A 137 VSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTS 177 (291)
T ss_dssp ECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred eechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHH
Confidence 9998876542211 1223456667777665544
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=6.5e-16 Score=120.47 Aligned_cols=140 Identities=14% Similarity=0.036 Sum_probs=94.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------------------cCCceeEEeccccChhHHHHhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------------------YHSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------------------~~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|+++||||+|+||++++++|+++|++|++++|++...... ...++.++.+|+++++++++++
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 5899999999999999999999999999999975432100 1123444555555555544444
Q ss_pred hcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH
Q psy3626 64 EGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM 132 (189)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~ 132 (189)
+. +.+.++++|++||++|.....+. .++|+.++
T Consensus 91 ~~------------------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~ 134 (281)
T 3s55_A 91 AE------------------------------------AEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGT 134 (281)
T ss_dssp HH------------------------------------HHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHH
T ss_pred HH------------------------------------HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHH
Confidence 32 23344589999999997543221 23777777
Q ss_pred HHHHHH----HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 133 KNIVTA----MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 133 ~~ll~~----~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++++ +++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 135 ~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 183 (281)
T 3s55_A 135 FNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN----FAQASYVSSKWGVIGLTK 183 (281)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECChhhcCCC----CCCchhHHHHHHHHHHHH
Confidence 666665 455666899999998876532 233457777777766554
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.64 E-value=7.4e-16 Score=118.39 Aligned_cols=140 Identities=15% Similarity=0.061 Sum_probs=96.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------C-CceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------H-SKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... . .++.++.+|++++++++++++.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------- 80 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD------- 80 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH-------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH-------
Confidence 57999999999999999999999999999999876543321 1 4567788888888887777654
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhHHHHHHHH---
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~~~ll~~~--- 139 (189)
+.+.+++.|++|+++|....... .++|+.++.++.+++
T Consensus 81 -----------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 131 (250)
T 3nyw_A 81 -----------------------------IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEI 131 (250)
T ss_dssp -----------------------------HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -----------------------------HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24556678999999987543221 236677665555544
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... .....|..+|...+.+.+
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 170 (250)
T 3nyw_A 132 MKVQKNGYIFNVASRAAKYGF----ADGGIYGSTKFALLGLAE 170 (250)
T ss_dssp HHHHTCEEEEEECC-----------CCTTHHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEEEccHHhcCCC----CCCcchHHHHHHHHHHHH
Confidence 55667899999998876521 124457777777765554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.4e-16 Score=119.74 Aligned_cols=140 Identities=13% Similarity=0.082 Sum_probs=100.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccc--cChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDV--LKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|+ +++++++++++.
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~------- 85 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR------- 85 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH-------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH-------
Confidence 58999999999999999999999999999999865543321 12567778888 777777766643
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHHHHHH-
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNIVTAM- 139 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~ll~~~- 139 (189)
+.+.+++.|++|+++|..... + ..++|+.++.++.+++
T Consensus 86 -----------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 136 (252)
T 3f1l_A 86 -----------------------------IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALL 136 (252)
T ss_dssp -----------------------------HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred -----------------------------HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 344556889999999864221 1 1246777766665555
Q ss_pred ---HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ---KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ---~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 137 ~~m~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~ 177 (252)
T 3f1l_A 137 PLLLKSDAGSLVFTSSSVGRQGR----ANWGAYAASKFATEGMMQ 177 (252)
T ss_dssp HHHHTSSSCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEECChhhccCC----CCCchhHHHHHHHHHHHH
Confidence 66677899999998875432 233457777777776655
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=117.81 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=97.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-------ccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+++||||+|+||++++++|+++|++|++++|+.....+ ....++.++.+|++++++++++++..
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~------- 79 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEA------- 79 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHH-------
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH-------
Confidence 5689999999999999999999999999999887533211 11245777888888887777766532
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeecc--CCCCC-----------CcceehhhHHHHHHHH-
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGT--RNDLS-----------PTTVMSEGMKNIVTAM- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~--~~~~~-----------~~~~~~~~~~~ll~~~- 139 (189)
.+.++++|++|+++|. ..... ..++|+.++.++++++
T Consensus 80 -----------------------------~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 130 (264)
T 3i4f_A 80 -----------------------------MSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVV 130 (264)
T ss_dssp -----------------------------HHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred -----------------------------HHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 3445678999999983 22111 1246777777776665
Q ss_pred ---HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ---KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ---~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||....... . ......|..+|...+.+.+
T Consensus 131 ~~~~~~~~g~iv~iss~~~~~~~-~-~~~~~~Y~asKaa~~~~~~ 173 (264)
T 3i4f_A 131 PVMRKQNFGRIINYGFQGADSAP-G-WIYRSAFAAAKVGLVSLTK 173 (264)
T ss_dssp HHHHHHTCEEEEEECCTTGGGCC-C-CTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEeechhcccC-C-CCCCchhHHHHHHHHHHHH
Confidence 66677899999987443211 1 1233456777777665554
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-15 Score=118.69 Aligned_cols=140 Identities=14% Similarity=0.023 Sum_probs=102.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~------------- 96 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDA------------- 96 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHH-------------
Confidence 5799999999999999999999999999999986554432 235677888899988888877754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH----HHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT----AMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~----~~~~~~ 143 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.+ .+++.+
T Consensus 97 -----------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 153 (277)
T 3gvc_A 97 -----------------------CVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG 153 (277)
T ss_dssp -----------------------HHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 34556789999999987543221 2367777555554 445567
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..+... .+....|..+|...+.+.+
T Consensus 154 ~g~Iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~ 187 (277)
T 3gvc_A 154 GGAIVNLSSLAGQVA----VGGTGAYGMSKAGIIQLSR 187 (277)
T ss_dssp CEEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcchhhccC----CCCchhHHHHHHHHHHHHH
Confidence 789999999887543 2234457777777766655
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=9e-16 Score=119.39 Aligned_cols=139 Identities=14% Similarity=0.074 Sum_probs=93.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------- 79 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST------- 79 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH-------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH-------
Confidence 5799999999999999999999999999999986543221 123466777777777777766643
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------C-------cceehhhHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------P-------TTVMSEGMKNIVT 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------~-------~~~~~~~~~~ll~ 137 (189)
+.+.++++|++|+++|.....+ . .++|+.++.++++
T Consensus 80 -----------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 130 (278)
T 1spx_A 80 -----------------------------TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK 130 (278)
T ss_dssp -----------------------------HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred -----------------------------HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence 2344557888888888643211 1 2367777666665
Q ss_pred HHH----HCCccEEEEecccee-ecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMK----EYNVSVVSVCLSAFL-FYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~----~~~~~~~i~iSS~~~-~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++. +.+ +++|++||..+ +... +....|..+|...+.+.+
T Consensus 131 ~~~~~~~~~~-g~iv~isS~~~~~~~~----~~~~~Y~~sK~a~~~~~~ 174 (278)
T 1spx_A 131 KAVPHLSSTK-GEIVNISSIASGLHAT----PDFPYYSIAKAAIDQYTR 174 (278)
T ss_dssp HHHHHHHHHT-CEEEEECCTTSSSSCC----TTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcC-CeEEEEecccccccCC----CCccHHHHHHHHHHHHHH
Confidence 554 345 89999999876 4321 223457777777766554
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.4e-15 Score=120.80 Aligned_cols=142 Identities=17% Similarity=0.040 Sum_probs=101.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------------cCCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------------YHSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------------~~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
|+++||||+|+||++++++|+++|++|++++|+++...++ ...++.++.+|++++++++++++.
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~--- 122 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK--- 122 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH---
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH---
Confidence 5799999999999999999999999999999998765432 123566777777777777766643
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~ 137 (189)
+.+.++++|++|+++|....... .++|+.++.++.+
T Consensus 123 ---------------------------------~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 169 (346)
T 3kvo_A 123 ---------------------------------AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASK 169 (346)
T ss_dssp ---------------------------------HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHH
T ss_pred ---------------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 24455689999999996543221 2478888777666
Q ss_pred HH----HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AM----KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~----~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++ ++.+.++||++||..+.... .......|..+|..++.+.+
T Consensus 170 ~~lp~m~~~~~g~IV~iSS~~~~~~~--~~~~~~~Y~aSKaal~~l~~ 215 (346)
T 3kvo_A 170 ACIPYLKKSKVAHILNISPPLNLNPV--WFKQHCAYTIAKYGMSMYVL 215 (346)
T ss_dssp HHHHHHTTCSSCEEEEECCCCCCCGG--GTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCHHHcCCC--CCCCchHHHHHHHHHHHHHH
Confidence 65 55567899999998765421 11234456777777666554
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-15 Score=115.55 Aligned_cols=137 Identities=13% Similarity=0.019 Sum_probs=95.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+..+.. .++.++.+|++++++++++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----------------- 69 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFA----------------- 69 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHH-----------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHH-----------------
Confidence 579999999999999999999999999999998655443221 25667777777777665333
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCcc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNVS 145 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~~ 145 (189)
+.++++|++|+++|.....+. .++|+.++.++++++ ++.+.+
T Consensus 70 -----------------------~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g 126 (246)
T 2ag5_A 70 -----------------------NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG 126 (246)
T ss_dssp -----------------------HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred -----------------------HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 224567888888886543211 236777766665554 455678
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..+... .|.....|..+|...+.+.+
T Consensus 127 ~iv~isS~~~~~~---~~~~~~~Y~~sK~a~~~~~~ 159 (246)
T 2ag5_A 127 NIINMSSVASSVK---GVVNRCVYSTTKAAVIGLTK 159 (246)
T ss_dssp EEEEECCSBTTTB---CCTTBHHHHHHHHHHHHHHH
T ss_pred eEEEEechHhCcC---CCCCCccHHHHHHHHHHHHH
Confidence 9999999876543 22234467777877776655
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=115.46 Aligned_cols=137 Identities=13% Similarity=0.103 Sum_probs=100.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++... ....++.+|++++++++++++..
T Consensus 4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~--------------- 64 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQT--------------- 64 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHH---------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHH---------------
Confidence 68999999999999999999999999999999876643 23567889999998888776532
Q ss_pred CccccCceeEEeccccCHHHHHHHh--cCCCEEEEeeccCCCCCC------------cceehhhHHHHHHHHHHC--Ccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAI--EGKDGVVVALGTRNDLSP------------TTVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~ll~~~~~~--~~~ 145 (189)
.+.+ +++|++|+++|.....+. .++|+.++.++.+++... ..+
T Consensus 65 ---------------------~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 123 (236)
T 1ooe_A 65 ---------------------ASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGG 123 (236)
T ss_dssp ---------------------HHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred ---------------------HHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCC
Confidence 3444 578999999886432211 236778888887777653 236
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
++|++||..++... +....|..+|...+.+.+.
T Consensus 124 ~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~~ 156 (236)
T 1ooe_A 124 LLQLTGAAAAMGPT----PSMIGYGMAKAAVHHLTSS 156 (236)
T ss_dssp EEEEECCGGGGSCC----TTBHHHHHHHHHHHHHHHH
T ss_pred EEEEECchhhccCC----CCcHHHHHHHHHHHHHHHH
Confidence 99999998876421 2334577778777766653
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=117.29 Aligned_cols=140 Identities=17% Similarity=0.099 Sum_probs=98.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~------------- 79 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQK------------- 79 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-------------
Confidence 5899999999999999999999999999999986544322 112567788888888887777653
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~ 143 (189)
+.+.++++|++||++|.....+. .++|+.++.++.+++ ++.+
T Consensus 80 -----------------------~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 136 (263)
T 3ak4_A 80 -----------------------AIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASN 136 (263)
T ss_dssp -----------------------HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 23445678999999886543211 236777766665544 4455
Q ss_pred -ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 -VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 -~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|...+.+.+
T Consensus 137 ~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 171 (263)
T 3ak4_A 137 TKGVIVNTASLAAKVGA----PLLAHYSASKFAVFGWTQ 171 (263)
T ss_dssp CCCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecccccccCC----CCchhHHHHHHHHHHHHH
Confidence 6899999998765432 223457777777766554
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=116.62 Aligned_cols=139 Identities=19% Similarity=0.141 Sum_probs=99.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+|+||++++++|+++|++|++++|+++....... .++.++.+|++++++++++++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------------- 71 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEA-------------- 71 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHH--------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHH--------------
Confidence 689999999999999999999999999999998654433211 13678889999998888777543
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCcc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNVS 145 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~~ 145 (189)
.+.++++|++|+++|.....+. .++|+.++.++.+++ ++.+.+
T Consensus 72 ----------------------~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g 129 (245)
T 1uls_A 72 ----------------------LAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG 129 (245)
T ss_dssp ----------------------HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred ----------------------HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence 4556778999999986543211 236777766665554 445678
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+||++||.. .... +....|..+|...+.+.+
T Consensus 130 ~iv~isS~~-~~~~----~~~~~Y~asK~a~~~~~~ 160 (245)
T 1uls_A 130 SIVLTASRV-YLGN----LGQANYAASMAGVVGLTR 160 (245)
T ss_dssp EEEEECCGG-GGCC----TTCHHHHHHHHHHHHHHH
T ss_pred EEEEEccch-hcCC----CCchhHHHHHHHHHHHHH
Confidence 999999987 4321 223456667776655444
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.63 E-value=6.8e-16 Score=120.00 Aligned_cols=140 Identities=12% Similarity=0.003 Sum_probs=101.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~--------- 97 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARL--------- 97 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986554322 1346777888888888877776532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~~~ 140 (189)
.+.++++|++|+++|.....+. .++|+.++.++ ++.++
T Consensus 98 ---------------------------~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 150 (271)
T 4ibo_A 98 ---------------------------DEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMI 150 (271)
T ss_dssp ---------------------------HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4455678999999987543321 23677776666 44555
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 151 ~~~~g~iV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 187 (271)
T 4ibo_A 151 PRGYGKIVNIGSLTSELAR----ATVAPYTVAKGGIKMLTR 187 (271)
T ss_dssp HHTCEEEEEECCGGGTSBC----TTCHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEEccHHhCCCC----CCchhHHHHHHHHHHHHH
Confidence 5566899999998765432 234457777777766554
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.5e-16 Score=119.60 Aligned_cols=144 Identities=14% Similarity=0.054 Sum_probs=93.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------------------cCCceeEEeccccChhHHHHhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------------------YHSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------------------~~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|+++||||+|+||++++++|+++|++|++++|+....... ...++.++.+|+++++++++++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 5899999999999999999999999999999874321100 0123445555555555544444
Q ss_pred hcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-------cceehhhHHHHH
Q psy3626 64 EGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-------TTVMSEGMKNIV 136 (189)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-------~~~~~~~~~~ll 136 (189)
+. +.+.++++|++||++|....... .++|+.++.+++
T Consensus 94 ~~------------------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~ 137 (278)
T 3sx2_A 94 QA------------------------------------GLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTI 137 (278)
T ss_dssp HH------------------------------------HHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHH
T ss_pred HH------------------------------------HHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Confidence 32 22334589999999997643322 247777776666
Q ss_pred HHH----HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 TAM----KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 ~~~----~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++ ++.+ .++||++||..+.......++....|..+|...+.+.+
T Consensus 138 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~ 187 (278)
T 3sx2_A 138 KVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMR 187 (278)
T ss_dssp HHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHH
Confidence 654 4443 57999999988765322222334457777777766554
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=119.69 Aligned_cols=140 Identities=13% Similarity=0.073 Sum_probs=97.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------CC---ceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------HS---KVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... .. ++.++.+|++++++++++++.+
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~------ 100 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT------ 100 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH------
Confidence 57999999999999999999999999999999865443211 12 5677788888887777766432
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--C-----------cceehhhHHHHHH--
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--P-----------TTVMSEGMKNIVT-- 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--~-----------~~~~~~~~~~ll~-- 137 (189)
.+.++++|++|+++|.....+ . .++|+.++.++++
T Consensus 101 ------------------------------~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 150 (297)
T 1xhl_A 101 ------------------------------LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKT 150 (297)
T ss_dssp ------------------------------HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ------------------------------HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHH
Confidence 344567899999998654322 1 2356666655554
Q ss_pred --HHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 --AMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 --~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+ ++||++||..+.... .+....|..+|...+.+.+
T Consensus 151 ~~~~~~~~-g~IV~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~ 192 (297)
T 1xhl_A 151 KEHLIKTK-GEIVNVSSIVAGPQA---HSGYPYYACAKAALDQYTR 192 (297)
T ss_dssp HHHHHHTT-CEEEEECCGGGSSSC---CTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHhcC-CEEEEEcCchhccCC---CCCcchHHHHHHHHHHHHH
Confidence 444556 899999998775432 1233457777777765554
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=119.45 Aligned_cols=140 Identities=14% Similarity=0.012 Sum_probs=99.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++.+
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 98 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL-------- 98 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH--------
Confidence 58999999999999999999999999999999865443211 345778888888888877776543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~--- 140 (189)
.+.+++.|++||++|.....+ ..++|+.++.++++++.
T Consensus 99 ----------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 150 (302)
T 1w6u_A 99 ----------------------------IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQL 150 (302)
T ss_dssp ----------------------------HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 344567899999998643221 12367777766665553
Q ss_pred --HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 --EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 --~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 151 ~~~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 189 (302)
T 1w6u_A 151 IKAQKGAAFLSITTIYAETGS----GFVVPSASAKAGVEAMSK 189 (302)
T ss_dssp HHTTCCEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEcccccccCC----CCcchhHHHHHHHHHHHH
Confidence 2345799999998776532 233457777777776654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=116.13 Aligned_cols=140 Identities=16% Similarity=0.062 Sum_probs=98.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|+++++ +.+..... ...++.++.+|++++++++++++.
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~--------- 84 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK--------- 84 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH---------
Confidence 68999999999999999999999999999884 44333211 134577788888888887776653
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH----HHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN----IVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~----ll~~~ 139 (189)
+.+.+++.|++|+++|....... .++|+.++.+ +++.+
T Consensus 85 ---------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 137 (256)
T 3ezl_A 85 ---------------------------VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGM 137 (256)
T ss_dssp ---------------------------HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 24455678999999986543321 2367777444 45556
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 138 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 175 (256)
T 3ezl_A 138 VERGWGRIINISSVNGQKGQ----FGQTNYSTAKAGIHGFTM 175 (256)
T ss_dssp HHHTCEEEEEECCCCGGGSC----SCCHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEEcchhhccCC----CCCcccHHHHHHHHHHHH
Confidence 66777899999998876532 233456777776665554
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-15 Score=116.74 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=84.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||+++||||+|+||++++++|+++|++|++++|+++.... .+.+|++++++++++++..
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~~-------------- 59 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAKC-------------- 59 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTTC--------------
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHHh--------------
Confidence 8899999999999999999999999999999998765432 1678888888877766532
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-CCC---CcceehhhHHHHHHHHH----HCCccEEEEecc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN-DLS---PTTVMSEGMKNIVTAMK----EYNVSVVSVCLS 152 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~-~~~---~~~~~~~~~~~ll~~~~----~~~~~~~i~iSS 152 (189)
.+++|++|+++|... ... ..++|+.++.++++++. +.+.++||++||
T Consensus 60 -------------------------~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS 114 (257)
T 1fjh_A 60 -------------------------SKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISS 114 (257)
T ss_dssp -------------------------TTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred -------------------------CCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECC
Confidence 135688999988654 221 23577888777666654 566789999999
Q ss_pred ceee
Q psy3626 153 AFLF 156 (189)
Q Consensus 153 ~~~~ 156 (189)
..++
T Consensus 115 ~~~~ 118 (257)
T 1fjh_A 115 VASA 118 (257)
T ss_dssp GGGG
T ss_pred hhhh
Confidence 8876
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=9.8e-16 Score=120.47 Aligned_cols=120 Identities=16% Similarity=0.086 Sum_probs=87.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccCh-hHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKL-ADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++...+. ...++.++.+|++++ ++++.+++.
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~-------- 84 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADF-------- 84 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHH--------
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHH--------
Confidence 5799999999999999999999999999999986544321 123577778888887 666665543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------------------------------
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------------------------------- 122 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------------------------------- 122 (189)
+.+.++++|++|+++|.....
T Consensus 85 ----------------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (311)
T 3o26_A 85 ----------------------------IKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQE 136 (311)
T ss_dssp ----------------------------HHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHT
T ss_pred ----------------------------HHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhc
Confidence 344556899999999975321
Q ss_pred ----------CCcceehhhHHHHHHHH----HHCCccEEEEeccceeec
Q psy3626 123 ----------SPTTVMSEGMKNIVTAM----KEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 123 ----------~~~~~~~~~~~~ll~~~----~~~~~~~~i~iSS~~~~~ 157 (189)
...++|+.++.++++++ ++.+.++||++||..+..
T Consensus 137 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~ 185 (311)
T 3o26_A 137 LMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSL 185 (311)
T ss_dssp TEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSG
T ss_pred ccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCccc
Confidence 01357778865555544 555668999999987654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.63 E-value=8.2e-16 Score=117.16 Aligned_cols=140 Identities=19% Similarity=0.080 Sum_probs=95.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|+++ .|+++..... ...++.++.+|++++++++++++..
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 73 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTA-------- 73 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHH--------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHH--------
Confidence 689999999999999999999999999985 6765433221 1234666777777777766665432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~--- 140 (189)
.+.++++|++||++|.....+ ..++|+.++.++++++.
T Consensus 74 ----------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 125 (244)
T 1edo_A 74 ----------------------------IDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIM 125 (244)
T ss_dssp ----------------------------HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 334457899999988654321 12467778766666554
Q ss_pred -HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 -EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 126 ~~~~~~~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~~~~ 163 (244)
T 1edo_A 126 MKKRKGRIINIASVVGLIGNI----GQANYAAAKAGVIGFSK 163 (244)
T ss_dssp HHHTCEEEEEECCTHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEECChhhcCCCC----CCccchhhHHHHHHHHH
Confidence 35678999999987765322 23456667776655544
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.3e-15 Score=115.82 Aligned_cols=135 Identities=17% Similarity=0.066 Sum_probs=101.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+.+..... ..+.+|++++++++++++.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~---------------- 87 (266)
T 3uxy_A 29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGA---------------- 87 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHH----------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHH----------------
Confidence 5799999999999999999999999999999987665432 3457899999888776643
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----HHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----KEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~~~~~~~ 146 (189)
+.+.+++.|++|+++|....... .++|+.++.++++++ ++.+.++
T Consensus 88 --------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~ 147 (266)
T 3uxy_A 88 --------------------VAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGA 147 (266)
T ss_dssp --------------------HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred --------------------HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcE
Confidence 34556789999999997654321 237777877766665 6666789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..++... +....|..+|...+.+.+
T Consensus 148 iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 178 (266)
T 3uxy_A 148 IVNVASCWGLRPG----PGHALYCLTKAALASLTQ 178 (266)
T ss_dssp EEEECCSBTTBCC----TTBHHHHHHHHHHHHHHH
T ss_pred EEEECCHHhCCCC----CCChHHHHHHHHHHHHHH
Confidence 9999998876432 234457777777766554
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=115.88 Aligned_cols=140 Identities=12% Similarity=-0.024 Sum_probs=100.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--------- 76 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEI--------- 76 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999986554332 1346778888888888877776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+..++.|++|+++|....... .++|+.++.++++.+ +
T Consensus 77 ---------------------------~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 129 (247)
T 3lyl_A 77 ---------------------------KAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMM 129 (247)
T ss_dssp ---------------------------HHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3445578999999987643321 236777766665554 4
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 130 ~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 166 (247)
T 3lyl_A 130 KKRWGRIISIGSVVGSAGN----PGQTNYCAAKAGVIGFSK 166 (247)
T ss_dssp HHTCEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred HcCCeEEEEEcchhhccCC----CCcHHHHHHHHHHHHHHH
Confidence 4566799999998876532 234457777776665554
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=118.75 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=71.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+|||||||||++++++|+++||+|+++.|++.... +..|. .
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~---------~~~~~----~----------------------- 44 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR---------ITWDE----L----------------------- 44 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE---------EEHHH----H-----------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe---------eecch----h-----------------------
Confidence 57999999999999999999999999999999864311 11111 1
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHCCc--cEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEYNV--SVVS 148 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~~~--~~~i 148 (189)
..+.+.++|+++|+++..-... ..+.|+.+++++++++...+. .++|
T Consensus 45 --------------------~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i 104 (298)
T 4b4o_A 45 --------------------AASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWV 104 (298)
T ss_dssp --------------------HHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEE
T ss_pred --------------------hHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEE
Confidence 1223445666777665432111 123688999999999998764 4578
Q ss_pred EeccceeecCC
Q psy3626 149 VCLSAFLFYEP 159 (189)
Q Consensus 149 ~iSS~~~~~~~ 159 (189)
+.||..++++.
T Consensus 105 ~~Ss~~vyg~~ 115 (298)
T 4b4o_A 105 LVTGVAYYQPS 115 (298)
T ss_dssp EEEEGGGSCCC
T ss_pred EEeeeeeecCC
Confidence 88888777653
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-16 Score=124.09 Aligned_cols=139 Identities=17% Similarity=0.048 Sum_probs=98.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
++++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++.+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~------- 81 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV------- 81 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH-------
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH-------
Confidence 47999999999999999999999999999999876544321 126778888888888877777543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH--
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK-- 140 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~-- 140 (189)
.+.++++|++|+++|.....+. .++|+.++.++++++.
T Consensus 82 -----------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 132 (319)
T 3ioy_A 82 -----------------------------EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPR 132 (319)
T ss_dssp -----------------------------HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -----------------------------HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3445678999999986543221 2477778777666553
Q ss_pred --HC------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 141 --EY------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 141 --~~------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+. +.++||++||..++...+ ....|..+|...+.+.
T Consensus 133 ~~~~~~~~~~~~g~iV~isS~a~~~~~~----~~~~Y~aSKaal~~~~ 176 (319)
T 3ioy_A 133 MVERVKAGEQKGGHVVNTASMAAFLAAG----SPGIYNTTKFAVRGLS 176 (319)
T ss_dssp HHHHHHTTSCCCCEEEEECCGGGTCCCS----SSHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCCCcEEEEecccccccCCC----CCHHHHHHHHHHHHHH
Confidence 32 356899999998765322 2345666777554443
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-15 Score=116.50 Aligned_cols=144 Identities=19% Similarity=0.123 Sum_probs=99.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+.+..... ...++.++.+|++++++++++++..
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-------- 86 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI-------- 86 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH--------
Confidence 5799999999999999999999999999999976543211 1345777888888888877766543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~--- 140 (189)
.+.++++|++|+++|.....+. .++|+.++.++++++.
T Consensus 87 ----------------------------~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 138 (265)
T 1h5q_A 87 ----------------------------DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLW 138 (265)
T ss_dssp ----------------------------HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ----------------------------HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHH
Confidence 3345568999999886543221 2467777777777654
Q ss_pred -HCC-ccEEEEeccceeecCCCC---CCCCCccchhhHHHHHHHhh
Q psy3626 141 -EYN-VSVVSVCLSAFLFYEPSK---VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 -~~~-~~~~i~iSS~~~~~~~~~---~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .++||++||..+....+. .+.+...|..+|...+.+.+
T Consensus 139 ~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~ 184 (265)
T 1h5q_A 139 LQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184 (265)
T ss_dssp HHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHH
T ss_pred HhcCCCceEEEeCCchhhccccccccccccccccHHHHHHHHHHHH
Confidence 333 479999999876542210 01124457777777766654
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-15 Score=118.79 Aligned_cols=140 Identities=13% Similarity=0.053 Sum_probs=100.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++..
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~--------- 102 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEA--------- 102 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH---------
Confidence 4799999999999999999999999999999987654432 1346777888888888777766532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+.++++|++|+++|.....+. .++|+.++.++++++ +
T Consensus 103 ---------------------------~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (301)
T 3tjr_A 103 ---------------------------FRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLL 155 (301)
T ss_dssp ---------------------------HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3445688999999997543221 236777777666654 4
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .++||++||..++... +....|..+|...+.+.+
T Consensus 156 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 193 (301)
T 3tjr_A 156 EQGTGGHIAFTASFAGLVPN----AGLGTYGVAKYGVVGLAE 193 (301)
T ss_dssp HHCSCEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred hcCCCcEEEEeCchhhcCCC----CCchHHHHHHHHHHHHHH
Confidence 444 5799999998876532 233456777776665544
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-15 Score=115.96 Aligned_cols=139 Identities=12% Similarity=0.056 Sum_probs=100.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.+
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~--------- 104 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA--------- 104 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH---------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999988766542 1356778888888888877776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+. +++|++|+++|....... .++|+.++.++++++ +
T Consensus 105 ---------------------------~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 156 (275)
T 4imr_A 105 ---------------------------EAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMV 156 (275)
T ss_dssp ---------------------------HHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 222 678999999986543321 236777766665554 5
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+... ......|..+|...+.+.+
T Consensus 157 ~~~~g~Iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~ 193 (275)
T 4imr_A 157 ARKWGRVVSIGSINQLRP----KSVVTAYAATKAAQHNLIQ 193 (275)
T ss_dssp HHTCEEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEECCHHhCCC----CCCchhhHHHHHHHHHHHH
Confidence 566789999999877541 1223346677777665554
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=7.2e-16 Score=120.85 Aligned_cols=140 Identities=17% Similarity=0.064 Sum_probs=102.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC---cEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL---EVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|+++||||+|+||++++++|+++|+ +|++.+|+++.+.++. ..++.++.+|++++++++++++.+
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~---- 109 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL---- 109 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS----
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH----
Confidence 6899999999999999999999987 9999999876554321 346778888999988888888765
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTA 138 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~ 138 (189)
.+.++++|++|+++|...... ..++|+.++.++.++
T Consensus 110 --------------------------------~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 157 (287)
T 3rku_A 110 --------------------------------PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQA 157 (287)
T ss_dssp --------------------------------CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --------------------------------HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 233567899999999654211 123777776666665
Q ss_pred H----HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 M----KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~----~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ ++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 158 ~~~~m~~~~~g~IV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 200 (287)
T 3rku_A 158 VLPIFQAKNSGDIVNLGSIAGRDAY----PTGSIYCASKFAVGAFTD 200 (287)
T ss_dssp HHHHHHHHTCCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEECChhhcCCC----CCCchHHHHHHHHHHHHH
Confidence 5 56667899999998875432 233457777777766555
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.5e-15 Score=117.91 Aligned_cols=141 Identities=14% Similarity=0.096 Sum_probs=98.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEE-ecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTL-LRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++||||+|+||++++++|+++|++|+++ .|+++..... ...++.++.+|++++++++++++.
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~--------- 97 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSA--------- 97 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH---------
Confidence 579999999999999999999999999887 5544333221 124577788888888877776653
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHHC
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~~ 142 (189)
+.+.++++|++|+++|...... ..++|+.++.++++++...
T Consensus 98 ---------------------------~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 150 (272)
T 4e3z_A 98 ---------------------------VDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRR 150 (272)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 2445568899999998754321 1247777777776665432
Q ss_pred -------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..+.... +..+..|..+|...+.+.+
T Consensus 151 ~~~~~~~~~g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~~~~ 193 (272)
T 4e3z_A 151 MSRLYSGQGGAIVNVSSMAAILGS---ATQYVDYAASKAAIDTFTI 193 (272)
T ss_dssp HCGGGTCCCEEEEEECCTHHHHCC---TTTCHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCEEEEEcchHhccCC---CCCcchhHHHHHHHHHHHH
Confidence 35799999998876532 2234457777777765544
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-15 Score=118.16 Aligned_cols=140 Identities=15% Similarity=0.098 Sum_probs=98.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------CC---ceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------HS---KVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... .. ++.++.+|++++++++++++.+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~------ 80 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST------ 80 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH------
Confidence 58999999999999999999999999999999865443211 11 5677888888888777766532
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----C-----------cceehhhHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----P-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----~-----------~~~~~~~~~~ll~ 137 (189)
.+.++++|++|+++|.....+ . .++|+.++.++++
T Consensus 81 ------------------------------~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~ 130 (280)
T 1xkq_A 81 ------------------------------LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTK 130 (280)
T ss_dssp ------------------------------HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred ------------------------------HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence 344567899999998654322 1 2367777666666
Q ss_pred HHH----HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMK----EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~----~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++. +.+ +++|++||..+.... .+....|..+|...+.+.+
T Consensus 131 ~~~~~~~~~~-g~iv~isS~~~~~~~---~~~~~~Y~asK~a~~~~~~ 174 (280)
T 1xkq_A 131 KVKPHLVASK-GEIVNVSSIVAGPQA---QPDFLYYAIAKAALDQYTR 174 (280)
T ss_dssp HHHHHHHHHT-CEEEEECCGGGSSSC---CCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCC-CcEEEecCccccCCC---CCcccHHHHHHHHHHHHHH
Confidence 554 345 899999998775432 1234457777777766554
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=118.22 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=101.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------c-CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------Y-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... . ..++.++.+|++++++++++++.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-------- 80 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA-------- 80 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH--------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH--------
Confidence 5799999999999999999999999999999986554321 1 12477888888888888777654
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~--- 139 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.+++
T Consensus 81 ----------------------------~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 132 (265)
T 3lf2_A 81 ----------------------------CERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQ 132 (265)
T ss_dssp ----------------------------HHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556789999999997543221 236777766666655
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 171 (265)
T 3lf2_A 133 LESRADAAIVCVNSLLASQPE----PHMVATSAARAGVKNLVR 171 (265)
T ss_dssp HTTSTTEEEEEEEEGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred hhccCCeEEEEECCcccCCCC----CCchhhHHHHHHHHHHHH
Confidence 45566899999998876432 234457777777766554
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.3e-15 Score=116.59 Aligned_cols=140 Identities=17% Similarity=0.095 Sum_probs=101.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++.
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~--------- 91 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR--------- 91 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986554322 234677888888888888777753
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.+++
T Consensus 92 ---------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 144 (266)
T 4egf_A 92 ---------------------------AAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAM 144 (266)
T ss_dssp ---------------------------HHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34556789999999997653321 236777766655554
Q ss_pred HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ .++||++||..++... +....|..+|...+.+.+
T Consensus 145 ~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~ 183 (266)
T 4egf_A 145 VAAGEGGAIITVASAAALAPL----PDHYAYCTSKAGLVMATK 183 (266)
T ss_dssp HHHTSCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEEEEcchhhccCC----CCChHHHHHHHHHHHHHH
Confidence 4443 4699999998876432 233457777777665554
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=2e-15 Score=116.11 Aligned_cols=140 Identities=14% Similarity=0.101 Sum_probs=100.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
.|+++||||+|+||++++++|+++| +.|++..|+++....+ ...++.++.+|++++++++++++..
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--------- 72 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAA--------- 72 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHH---------
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH---------
Confidence 1789999999999999999999984 7888888886554432 1346778888888888888777543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~ll~~~---- 139 (189)
.+.+++.|++|+++|..... + ..++|+.++.++.+++
T Consensus 73 ---------------------------~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m 125 (254)
T 3kzv_A 73 ---------------------------VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPEL 125 (254)
T ss_dssp ---------------------------HHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45567899999999974331 1 1246777776666655
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ +++|++||..+.... +....|..+|...+.+.+
T Consensus 126 ~~~~-g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 162 (254)
T 3kzv_A 126 KKTN-GNVVFVSSDACNMYF----SSWGAYGSSKAALNHFAM 162 (254)
T ss_dssp HHHT-CEEEEECCSCCCCSS----CCSHHHHHHHHHHHHHHH
T ss_pred HhcC-CeEEEEcCchhccCC----CCcchHHHHHHHHHHHHH
Confidence 5555 799999998876432 233457777777766655
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-15 Score=118.51 Aligned_cols=141 Identities=12% Similarity=0.034 Sum_probs=100.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+... ...++.++.+|++++++++++++.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---------- 78 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL---------- 78 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999986544322 134577788888888877776643
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNIVTA----M 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~ll~~----~ 139 (189)
+.+.++++|++|+++|..... + ..++|+.++.++.++ +
T Consensus 79 --------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 132 (280)
T 3tox_A 79 --------------------------AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAI 132 (280)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345566899999999865321 1 123677776665554 4
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+... ..+....|..+|...+.+.+
T Consensus 133 ~~~~~g~iv~isS~~~~~~---~~~~~~~Y~asKaa~~~l~~ 171 (280)
T 3tox_A 133 AALGGGSLTFTSSFVGHTA---GFAGVAPYAASKAGLIGLVQ 171 (280)
T ss_dssp HHTTCEEEEEECCSBTTTB---CCTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEEcChhhCcC---CCCCchhHHHHHHHHHHHHH
Confidence 5666789999999876521 12234457777777766554
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=6.2e-16 Score=120.83 Aligned_cols=140 Identities=15% Similarity=0.053 Sum_probs=99.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ...+.++.+|++++++++++++.+
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-------- 105 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV-------- 105 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH--------
Confidence 57999999999999999999999999999999876543321 122478888888888888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhH----HHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGM----KNIVTA 138 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~----~~ll~~ 138 (189)
.+.+++.|++|+++|..... + ..++|+.++ +.+++.
T Consensus 106 ----------------------------~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 157 (281)
T 4dry_A 106 ----------------------------RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRM 157 (281)
T ss_dssp ----------------------------HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45567889999999975432 1 123666764 444555
Q ss_pred HHHCC--ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYN--VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~--~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+ .++||++||..+... .+....|..+|...+.+.+
T Consensus 158 ~~~~~~~~g~IV~isS~~~~~~----~~~~~~Y~asKaa~~~l~~ 198 (281)
T 4dry_A 158 MKAQTPRGGRIINNGSISAQTP----RPNSAPYTATKHAITGLTK 198 (281)
T ss_dssp HHHSSSCCEEEEEECCGGGTCC----CTTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcEEEEECCHHhCCC----CCCChhHHHHHHHHHHHHH
Confidence 56654 579999999887543 2234457777777766555
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-15 Score=117.89 Aligned_cols=140 Identities=13% Similarity=0.012 Sum_probs=97.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCccc-------CCceeEEeccccCh----hHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSEY-------HSKVEIIQGDVLKL----ADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~~-------~~~~~~~~~d~~~~----~~~~~~~~~~~~~ 69 (189)
|+++||||+|+||++++++|+++|++|++++| +++...... ..++.++.+|++++ ++++++++.
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~---- 87 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC---- 87 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH----
Confidence 57999999999999999999999999999999 654333210 34577888888888 776666543
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC----------------------Ccce
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS----------------------PTTV 127 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~----------------------~~~~ 127 (189)
+.+.++++|++||++|.....+ ..++
T Consensus 88 --------------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (276)
T 1mxh_A 88 --------------------------------SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGS 135 (276)
T ss_dssp --------------------------------HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHH
T ss_pred --------------------------------HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHh
Confidence 2344567888888888543221 1236
Q ss_pred ehhhHHHHHHHHHH---CCc------cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 128 MSEGMKNIVTAMKE---YNV------SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 128 ~~~~~~~ll~~~~~---~~~------~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
|+.++.++++++.. .+. ++||++||..++... +....|..+|...+.+.+
T Consensus 136 N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~l~~ 194 (276)
T 1mxh_A 136 NAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL----PGFCVYTMAKHALGGLTR 194 (276)
T ss_dssp HTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCC----TTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC----CCCeehHHHHHHHHHHHH
Confidence 77888888887766 344 799999998876432 223457777777765554
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-15 Score=118.45 Aligned_cols=136 Identities=13% Similarity=0.089 Sum_probs=93.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++++|+++...+.. ...+.++.+|++++++++++++
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--------- 81 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--------- 81 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH---------
Confidence 57999999999999999999999999999999865443210 1234455566665555444332
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~ 138 (189)
.+++.|++|+++|.....+. .++|+.+ ++.+++.
T Consensus 82 -------------------------------~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 130 (267)
T 3t4x_A 82 -------------------------------KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKK 130 (267)
T ss_dssp -------------------------------HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -------------------------------hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 23467899999886543321 2467777 4555667
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+++|++||..++.. .+....|..+|...+.+.+
T Consensus 131 ~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asKaa~~~l~~ 169 (267)
T 3t4x_A 131 MIERKEGRVIFIASEAAIMP----SQEMAHYSATKTMQLSLSR 169 (267)
T ss_dssp HHHTTEEEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEEcchhhccC----CCcchHHHHHHHHHHHHHH
Confidence 77777889999999887643 2234457777777776655
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.62 E-value=6.2e-16 Score=119.16 Aligned_cols=140 Identities=14% Similarity=0.138 Sum_probs=104.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+.++ ...++.++.+|++++++++++++.
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------------- 75 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAA------------- 75 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHH-------------
Confidence 5899999999999999999999999999999987655432 235678888888888888776643
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC--Ccc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~--~~~ 145 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.+++... ..+
T Consensus 76 -----------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g 132 (255)
T 4eso_A 76 -----------------------AGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGG 132 (255)
T ss_dssp -----------------------HHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred -----------------------HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCC
Confidence 34556788999999987653321 347888888888888653 246
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..+.... +....|..+|...+.+.+
T Consensus 133 ~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 164 (255)
T 4eso_A 133 SIVFTSSVADEGGH----PGMSVYSASKAALVSFAS 164 (255)
T ss_dssp EEEEECCGGGSSBC----TTBHHHHHHHHHHHHHHH
T ss_pred EEEEECChhhcCCC----CCchHHHHHHHHHHHHHH
Confidence 99999998876532 234457777777766554
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-15 Score=116.19 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=98.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---------- 77 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS---------- 77 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999986544321 123567778888888877776643
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccC-CCCCC-----------cceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTR-NDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~-~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++|+++|.. ...+. .++|+.++.++++++
T Consensus 78 --------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 131 (262)
T 1zem_A 78 --------------------------VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQM 131 (262)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 244566889999999865 22111 236777766655554
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 132 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 169 (262)
T 1zem_A 132 ITQNYGRIVNTASMAGVKGP----PNMAAYGTSKGAIIALTE 169 (262)
T ss_dssp HHHTCEEEEEECCHHHHSCC----TTBHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcchhhccCC----CCCchHHHHHHHHHHHHH
Confidence 44566899999998776532 223456667766655544
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.6e-15 Score=113.05 Aligned_cols=137 Identities=10% Similarity=0.012 Sum_probs=102.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++.... ..+.+|++++++++++++..
T Consensus 23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~--------------- 81 (251)
T 3orf_A 23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKI--------------- 81 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHH---------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHH---------------
Confidence 689999999999999999999999999999999766542 35678899998888877543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHHC--CccEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKEY--NVSVV 147 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~~--~~~~~ 147 (189)
.+.+++.|++|+++|...... ..++|+.++.++++++... ..++|
T Consensus 82 ---------------------~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 140 (251)
T 3orf_A 82 ---------------------NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLF 140 (251)
T ss_dssp ---------------------HTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred ---------------------HHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEE
Confidence 344567899999998643321 1237888888888888653 23599
Q ss_pred EEeccceeecCCCCCCCCCccchhhHHHHHHHhhhcC
Q psy3626 148 SVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSG 184 (189)
Q Consensus 148 i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~ 184 (189)
|++||..+.... +....|..+|...+.+.+...
T Consensus 141 v~isS~~~~~~~----~~~~~Y~~sKaa~~~~~~~la 173 (251)
T 3orf_A 141 VLTGASAALNRT----SGMIAYGATKAATHHIIKDLA 173 (251)
T ss_dssp EEECCGGGGSCC----TTBHHHHHHHHHHHHHHHHHT
T ss_pred EEEechhhccCC----CCCchhHHHHHHHHHHHHHHH
Confidence 999998876431 234457777888777776443
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-15 Score=114.37 Aligned_cols=136 Identities=13% Similarity=0.032 Sum_probs=92.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
++++||||+|+||++++++|+++|++|++++|+++....+. ..+.+++.+|++++++++++++..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------- 74 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV------------- 74 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC-------------
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHc-------------
Confidence 58999999999999999999999999999999865433221 123455667777766666555421
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH----HCC-
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK----EYN- 143 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~----~~~- 143 (189)
+++|++|+++|.....+ ..++|+.++.++++++. +.+
T Consensus 75 ---------------------------~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~ 127 (244)
T 3d3w_A 75 ---------------------------GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV 127 (244)
T ss_dssp ---------------------------CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ---------------------------CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 24678888877543221 12467777666665553 345
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..++.. .+....|..+|...+.+.+
T Consensus 128 ~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~~~~ 161 (244)
T 3d3w_A 128 PGAIVNVSSQCSQRA----VTNHSVYCSTKGALDMLTK 161 (244)
T ss_dssp CEEEEEECCGGGTSC----CTTBHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCchhhccC----CCCCchHHHHHHHHHHHHH
Confidence 689999999876542 1234467778887776665
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=118.11 Aligned_cols=140 Identities=12% Similarity=0.056 Sum_probs=101.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+.+..... ...++.++.+|++++++++++++.
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~--------- 98 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ--------- 98 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH---------
Confidence 5899999999999999999999999999999986544321 134677888888888887777654
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.+++
T Consensus 99 ---------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 151 (277)
T 4fc7_A 99 ---------------------------ALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKF 151 (277)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred ---------------------------HHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34556789999999986543221 247788877777665
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 152 ~~~~~g~iv~isS~~~~~~~~----~~~~Y~asKaa~~~l~~ 189 (277)
T 4fc7_A 152 FRDHGGVIVNITATLGNRGQA----LQVHAGSAKAAVDAMTR 189 (277)
T ss_dssp HHHHCEEEEEECCSHHHHTCT----TCHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEECchhhCCCCC----CcHHHHHHHHHHHHHHH
Confidence 344457999999988765322 23356667777665554
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.5e-16 Score=120.27 Aligned_cols=120 Identities=16% Similarity=0.091 Sum_probs=88.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHH-cCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALK-QGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+++||||+|+||++++++|++ +|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~------- 76 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFL------- 76 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-------
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH-------
Confidence 47899999999999999999999 899999999986543321 1235667777887777776666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~ 142 (189)
.+.++++|++||++|...... ..++|+.++.++++++...
T Consensus 77 -----------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 127 (276)
T 1wma_A 77 -----------------------------RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 127 (276)
T ss_dssp -----------------------------HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred -----------------------------HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh
Confidence 333457888888888543221 1347888999999998765
Q ss_pred C--ccEEEEeccceee
Q psy3626 143 N--VSVVSVCLSAFLF 156 (189)
Q Consensus 143 ~--~~~~i~iSS~~~~ 156 (189)
- .++||++||..++
T Consensus 128 ~~~~g~iv~~sS~~~~ 143 (276)
T 1wma_A 128 IKPQGRVVNVSSIMSV 143 (276)
T ss_dssp EEEEEEEEEECCHHHH
T ss_pred hCCCCEEEEECChhhh
Confidence 2 3599999998765
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.8e-15 Score=114.64 Aligned_cols=140 Identities=17% Similarity=0.088 Sum_probs=94.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++| +++..... ...++.++.+|++++++++++++.
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 78 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS--------- 78 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH---------
Confidence 58999999999999999999999999999999 54332211 123466777777777776666543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH----HH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT----AM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~----~~ 139 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++ .+
T Consensus 79 ---------------------------~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 131 (261)
T 1gee_A 79 ---------------------------AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYF 131 (261)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 23344578999999886543211 2366666655544 44
Q ss_pred HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ .++||++||..+... .+....|..+|...+.+.+
T Consensus 132 ~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~~~~~~ 170 (261)
T 1gee_A 132 VENDIKGTVINMSSVHEKIP----WPLFVHYAASKGGMKLMTE 170 (261)
T ss_dssp HHTTCCCEEEEECCGGGTSC----CTTCHHHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEEeCCHHhcCC----CCCccHHHHHHHHHHHHHH
Confidence 5555 679999999876532 1234457777776665544
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-15 Score=118.50 Aligned_cols=139 Identities=13% Similarity=0.007 Sum_probs=97.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++| +++..... ...++.++.+|++++++++++++.
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~--------- 92 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK--------- 92 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH---------
Confidence 58999999999999999999999999999998 43322211 124566777777777777666642
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.++++|++|+++|...... ..++|+.++.++++++...
T Consensus 93 ---------------------------~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 145 (274)
T 1ja9_A 93 ---------------------------AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC 145 (274)
T ss_dssp ---------------------------HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHE
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233457788888888653221 1347888888888877654
Q ss_pred --CccEEEEeccceee-cCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 --NVSVVSVCLSAFLF-YEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 --~~~~~i~iSS~~~~-~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ ++||++||..++ ... +....|..+|...+.+.+
T Consensus 146 ~~~-~~iv~~sS~~~~~~~~----~~~~~Y~~sK~a~~~~~~ 182 (274)
T 1ja9_A 146 RRG-GRIILTSSIAAVMTGI----PNHALYAGSKAAVEGFCR 182 (274)
T ss_dssp EEE-EEEEEECCGGGTCCSC----CSCHHHHHHHHHHHHHHH
T ss_pred hhC-CEEEEEcChHhccCCC----CCCchHHHHHHHHHHHHH
Confidence 4 799999998876 321 223457777877776655
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=117.23 Aligned_cols=140 Identities=13% Similarity=0.007 Sum_probs=99.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+.. ..... ...++.++.+|++++++++++++.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~--------- 99 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAA--------- 99 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH---------
Confidence 57999999999999999999999999999988532 22211 134567778888888877776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.++++|++|+++|....... .++|+.++.++.+++
T Consensus 100 ---------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 152 (269)
T 4dmm_A 100 ---------------------------VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIM 152 (269)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34556689999999987654321 236777766665554
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 153 ~~~~~g~iv~isS~~~~~~~~----~~~~Y~asK~a~~~l~~ 190 (269)
T 4dmm_A 153 LKQRSGRIINIASVVGEMGNP----GQANYSAAKAGVIGLTK 190 (269)
T ss_dssp HHHTCCEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEECchhhcCCCC----CchhHHHHHHHHHHHHH
Confidence 556668999999988765322 23457777777665554
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.2e-15 Score=114.99 Aligned_cols=137 Identities=17% Similarity=0.131 Sum_probs=100.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+++||+++++.|+++|++|++.+|+..... .....+++|++++++++++++.
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~---------------- 71 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL----PEELFVEADLTTKEGCAIVAEA---------------- 71 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS----CTTTEEECCTTSHHHHHHHHHH----------------
T ss_pred CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC----CcEEEEEcCCCCHHHHHHHHHH----------------
Confidence 58999999999999999999999999999999754322 2334788999999998887754
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--CC-----------cceehhh----HHHHHHHHHHCCc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--SP-----------TTVMSEG----MKNIVTAMKEYNV 144 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~~-----------~~~~~~~----~~~ll~~~~~~~~ 144 (189)
+.+.+++.|++|+++|..... +. .++|+.+ ++.+++.+++++.
T Consensus 72 --------------------~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~ 131 (261)
T 4h15_A 72 --------------------TRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGS 131 (261)
T ss_dssp --------------------HHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred --------------------HHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCC
Confidence 456788999999999864321 11 1356665 4566677777777
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..+... .|.....|..+|..+..+.+
T Consensus 132 G~Iv~isS~~~~~~---~~~~~~~Y~asKaal~~lt~ 165 (261)
T 4h15_A 132 GVVVHVTSIQRVLP---LPESTTAYAAAKAALSTYSK 165 (261)
T ss_dssp EEEEEECCGGGTSC---CTTTCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEehhhccC---CCCccHHHHHHHHHHHHHHH
Confidence 89999999876542 23233345566766665544
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.7e-15 Score=115.31 Aligned_cols=142 Identities=15% Similarity=0.020 Sum_probs=99.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------------CCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------------HSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
|+++||||+|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++++++++++++.
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~--- 83 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA--- 83 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH---
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH---
Confidence 68999999999999999999999999999999976543321 24566777777777777766643
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~ 137 (189)
+.+.++++|++|+++|.....+. .++|+.++.++.+
T Consensus 84 ---------------------------------~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 130 (274)
T 3e03_A 84 ---------------------------------TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQ 130 (274)
T ss_dssp ---------------------------------HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHH
T ss_pred ---------------------------------HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHH
Confidence 24455689999999997543321 2367777666555
Q ss_pred HH----HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AM----KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~----~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++ ++.+.+++|++||..+.... ..+....|..+|...+.+.+
T Consensus 131 ~~~~~m~~~~~g~iv~isS~~~~~~~--~~~~~~~Y~asKaal~~l~~ 176 (274)
T 3e03_A 131 ACLPHLLQAPNPHILTLAPPPSLNPA--WWGAHTGYTLAKMGMSLVTL 176 (274)
T ss_dssp HHHHHHTTSSSCEEEECCCCCCCCHH--HHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceEEEECChHhcCCC--CCCCCchHHHHHHHHHHHHH
Confidence 54 55667899999998765320 01223346677777665554
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.3e-15 Score=113.92 Aligned_cols=141 Identities=14% Similarity=0.061 Sum_probs=96.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+ ++....+ ...++.++.+|++++++++++++..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 79 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEF-------- 79 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH--------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH--------
Confidence 589999999999999999999999999999998 5544322 1235677777877777777666432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeecc-CCCCC-----------CcceehhhHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGT-RNDLS-----------PTTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~-~~~~~-----------~~~~~~~~~~~ll~~~--- 139 (189)
.+.++++|++||++|. ....+ ..++|+.++.++++++
T Consensus 80 ----------------------------~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (258)
T 3afn_B 80 ----------------------------VAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPH 131 (258)
T ss_dssp ----------------------------HHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3344578999999886 32111 1246777776666644
Q ss_pred -HHCC--c---cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYN--V---SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~--~---~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ . +++|++||..+.... .+....|..+|...+.+.+
T Consensus 132 ~~~~~~~~~~~~~iv~~sS~~~~~~~---~~~~~~Y~~sK~a~~~~~~ 176 (258)
T 3afn_B 132 LAAAAKASGQTSAVISTGSIAGHTGG---GPGAGLYGAAKAFLHNVHK 176 (258)
T ss_dssp HHHHHHHHTSCEEEEEECCTHHHHCC---CTTCHHHHHHHHHHHHHHH
T ss_pred HHhcccCCCCCcEEEEecchhhccCC---CCCchHHHHHHHHHHHHHH
Confidence 3333 3 799999998765411 1234457777877776654
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=116.89 Aligned_cols=140 Identities=11% Similarity=-0.024 Sum_probs=101.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~---------- 98 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES---------- 98 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999986544322 124567788888888887777653
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
+.+.++++|++|+++|....... .++|+.++.++.+++ +
T Consensus 99 --------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 152 (270)
T 3ftp_A 99 --------------------------TLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM 152 (270)
T ss_dssp --------------------------HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34556789999999986543321 237777777666655 4
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 153 ~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 189 (270)
T 3ftp_A 153 KARGGRIVNITSVVGSAGN----PGQVNYAAAKAGVAGMTR 189 (270)
T ss_dssp HHTCEEEEEECCHHHHHCC----TTBHHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEECchhhCCCC----CCchhHHHHHHHHHHHHH
Confidence 4556799999998876532 233457777777665554
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-15 Score=114.65 Aligned_cols=140 Identities=14% Similarity=0.098 Sum_probs=98.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccc--cChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDV--LKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...+..++.+|+ +++++++++++.
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~------- 87 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR------- 87 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH-------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH-------
Confidence 5899999999999999999999999999999986554322 113455566666 677766665543
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------------cceehhhHHHHHHHH-
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------------TTVMSEGMKNIVTAM- 139 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~ll~~~- 139 (189)
+.+.++++|++|+++|......+ .++|+.++.++++++
T Consensus 88 -----------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 138 (247)
T 3i1j_A 88 -----------------------------VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALL 138 (247)
T ss_dssp -----------------------------HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred -----------------------------HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34455689999999986432211 236777777666665
Q ss_pred ---HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ---KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ---~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 139 ~~~~~~~~~~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 179 (247)
T 3i1j_A 139 PLLKRSEDASIAFTSSSVGRKGR----ANWGAYGVSKFATEGLMQ 179 (247)
T ss_dssp HHHTTSSSEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCeEEEEcchhhcCCC----CCcchhHHHHHHHHHHHH
Confidence 55667899999998775432 233457777777766554
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-14 Score=110.49 Aligned_cols=133 Identities=17% Similarity=0.070 Sum_probs=95.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++ . ..+.++.+|++++++++++++..
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~--------------- 61 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----EDLIYVEGDVTREEDVRRAVARA--------------- 61 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----SSSEEEECCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----cceEEEeCCCCCHHHHHHHHHHH---------------
Confidence 68999999999999999999999999999999876 2 34578899999999888777532
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---------------CcceehhhHHHHHHHHHHC----
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---------------PTTVMSEGMKNIVTAMKEY---- 142 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---------------~~~~~~~~~~~ll~~~~~~---- 142 (189)
+...+.|++|+++|...... ..++|+.++.++++++...
T Consensus 62 ----------------------~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 119 (242)
T 1uay_A 62 ----------------------QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMREN 119 (242)
T ss_dssp ----------------------HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred ----------------------HhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 22345677777776543221 1236788888887777542
Q ss_pred C------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .++||++||..++... +....|..+|...+.+.+
T Consensus 120 ~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 160 (242)
T 1uay_A 120 PPDAEGQRGVIVNTASVAAFEGQ----IGQAAYAASKGGVVALTL 160 (242)
T ss_dssp CCCTTSCSEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCeEEEEeCChhhccCC----CCCchhhHHHHHHHHHHH
Confidence 2 2399999999876532 233457777777665554
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-15 Score=116.19 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=99.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---------- 81 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE---------- 81 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999986554332 134677888888888888777754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------------cceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~ll~~~---- 139 (189)
+.+.+++.|++|+++|......+ .++|+.++.++++++
T Consensus 82 --------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 135 (264)
T 3ucx_A 82 --------------------------TMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPAL 135 (264)
T ss_dssp --------------------------HHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred --------------------------HHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34556688999999976422211 236777776666554
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ +++|++||..+.... +....|..+|...+.+.+
T Consensus 136 ~~~~-g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 172 (264)
T 3ucx_A 136 EESK-GAVVNVNSMVVRHSQ----AKYGAYKMAKSALLAMSQ 172 (264)
T ss_dssp HHHT-CEEEEECCGGGGCCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHcC-CEEEEECcchhccCC----CccHHHHHHHHHHHHHHH
Confidence 4444 799999998876432 233457777777766554
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=6e-15 Score=115.75 Aligned_cols=140 Identities=11% Similarity=0.089 Sum_probs=103.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-------ccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+.+.... ....++.++.+|++++++++++++.
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~--------- 118 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQE--------- 118 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH---------
Confidence 589999999999999999999999999999998643211 1234677788888888887777653
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHHC
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~~ 142 (189)
+.+.+++.|++|+++|...... ..++|+.++.++++++...
T Consensus 119 ---------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 171 (291)
T 3ijr_A 119 ---------------------------TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171 (291)
T ss_dssp ---------------------------HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred ---------------------------HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3455678999999998654321 1347888999999988764
Q ss_pred --CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 --NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 --~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..++||++||..++...+ ....|..+|...+.+.+
T Consensus 172 ~~~~g~iv~isS~~~~~~~~----~~~~Y~asKaa~~~l~~ 208 (291)
T 3ijr_A 172 LKQGDVIINTASIVAYEGNE----TLIDYSATKGAIVAFTR 208 (291)
T ss_dssp CCTTCEEEEECCTHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HhhCCEEEEEechHhcCCCC----CChhHHHHHHHHHHHHH
Confidence 346999999988775322 23457777777766554
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-15 Score=114.57 Aligned_cols=136 Identities=15% Similarity=0.042 Sum_probs=90.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||++++++|+++|++|++++|+++.+..+ ...++.+..+|++++++++++++..
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------------ 82 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT------------ 82 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC------------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc------------
Confidence 6899999999999999999999999999999986544332 1245666667777766666555432
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH----HHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM----KEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~----~~~~ 143 (189)
++.|++|+++|...... ..++|+.++.++++++ ++.+
T Consensus 83 ----------------------------~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 134 (249)
T 3f9i_A 83 ----------------------------SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR 134 (249)
T ss_dssp ----------------------------SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------------CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 24688888887543221 1246777766665544 5556
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..++... +....|..+|...+.+.+
T Consensus 135 ~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 168 (249)
T 3f9i_A 135 YGRIINISSIVGIAGN----PGQANYCASKAGLIGMTK 168 (249)
T ss_dssp CEEEEEECCCCC--CC----SCSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEccHHhccCC----CCCchhHHHHHHHHHHHH
Confidence 6899999998876532 233457777777665554
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-15 Score=117.62 Aligned_cols=140 Identities=15% Similarity=0.015 Sum_probs=100.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+. ..++.++.+|++++++++++++.
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-------------- 75 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSE-------------- 75 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH--------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHH--------------
Confidence 57999999999999999999999999999999865443221 12467888899988888877753
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHH---CCc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKE---YNV 144 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~---~~~ 144 (189)
+.+.++++|++|+++|...... ..++|+.++.++++++.. .+.
T Consensus 76 ----------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 133 (270)
T 1yde_A 76 ----------------------TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ 133 (270)
T ss_dssp ----------------------HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC
Confidence 2445668899999998653211 124777787777666642 124
Q ss_pred cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 145 SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 145 ~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..+....+ ....|..+|...+.+.+
T Consensus 134 g~iv~isS~~~~~~~~----~~~~Y~asKaa~~~~~~ 166 (270)
T 1yde_A 134 GNVINISSLVGAIGQA----QAVPYVATKGAVTAMTK 166 (270)
T ss_dssp CEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCccccCCCC----CCcccHHHHHHHHHHHH
Confidence 7999999987655322 23457777777766554
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-15 Score=117.49 Aligned_cols=140 Identities=10% Similarity=-0.065 Sum_probs=103.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||+++++.|+++|++|.+.+|+++.+.+. ...++..+.+|++++++++++++.+
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~--------- 80 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL--------- 80 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987655432 2356788899999999988888543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhH----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGM----KNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~----~~ll~~~~ 140 (189)
.+.+++.|++|+++|.....+.. ++|+.++ +.+++.+.
T Consensus 81 ---------------------------~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 133 (255)
T 4g81_D 81 ---------------------------DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMI 133 (255)
T ss_dssp ---------------------------HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56678899999999976554332 2566664 45556665
Q ss_pred H-CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 E-YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~-~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .+.+++|.+||..+....+ ....|..+|..+..+.+
T Consensus 134 ~~~~~G~IVnisS~~~~~~~~----~~~~Y~asKaal~~ltr 171 (255)
T 4g81_D 134 ARNSGGKIINIGSLTSQAARP----TVAPYTAAKGGIKMLTC 171 (255)
T ss_dssp HHTCCEEEEEECCGGGTSBCT----TCHHHHHHHHHHHHHHH
T ss_pred HccCCCEEEEEeehhhcCCCC----CchhHHHHHHHHHHHHH
Confidence 4 3568999999998754322 23356667777765555
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=8e-15 Score=114.28 Aligned_cols=152 Identities=15% Similarity=0.027 Sum_probs=92.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+.+..... .+...+..+.+.+.+.++..
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--------------- 75 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASV-----TYAPASPEDLDETARLVEDQ--------------- 75 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTC-----CSCCCCHHHHHHHHHHHHTT---------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccc-----cccccCHHHHHHHHHHHHhc---------------
Confidence 5799999999999999999999999999999864322110 00000111111111111111
Q ss_pred CccccCceeEEeccccCHHHHHH-------HhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKK-------AIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
..++..+.+|+.+++++.+ .++++|++|+++|.....+. .++|+.++.++++++
T Consensus 76 ----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 151 (280)
T 3pgx_A 76 ----GRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAM 151 (280)
T ss_dssp ----TCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ----CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 1244455555555544443 34589999999997653321 236777766665554
Q ss_pred HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 152 ~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 190 (280)
T 3pgx_A 152 IEAGNGGSIVVVSSSAGLKAT----PGNGHYSASKHGLTALTN 190 (280)
T ss_dssp HHHCSCEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred HhcCCCCEEEEEcchhhccCC----CCchhHHHHHHHHHHHHH
Confidence 4443 5799999998876432 233457777777765554
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.6e-15 Score=114.67 Aligned_cols=140 Identities=16% Similarity=0.100 Sum_probs=100.1
Q ss_pred ceEEEEcCCC-hhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATG-MTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG-~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+| +||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++.+
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~------- 95 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT------- 95 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH-------
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH-------
Confidence 5899999998 699999999999999999999986544321 1246778888888888877777543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH--
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK-- 140 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~-- 140 (189)
.+.+++.|++|+++|....... .++|+.++.++++++.
T Consensus 96 -----------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 146 (266)
T 3o38_A 96 -----------------------------VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRY 146 (266)
T ss_dssp -----------------------------HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -----------------------------HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4456688999999996543321 2367777766666554
Q ss_pred --HC-CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 --EY-NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 --~~-~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+. +.++||++||..+.... +....|..+|...+.+.+
T Consensus 147 ~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sKaa~~~~~~ 186 (266)
T 3o38_A 147 FRGVDHGGVIVNNASVLGWRAQ----HSQSHYAAAKAGVMALTR 186 (266)
T ss_dssp HHTSSCCEEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEeCCHHHcCCC----CCCchHHHHHHHHHHHHH
Confidence 33 56799999998875432 234457777777765554
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-15 Score=114.21 Aligned_cols=140 Identities=17% Similarity=0.157 Sum_probs=98.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCCCC--CCccc----CCceeEEeccccCh-hHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDPQR--LPSEY----HSKVEIIQGDVLKL-ADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~--~~~~~----~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++ |++++|++.. ..++. ..++.++.+|++++ ++++++++.
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 77 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK-------- 77 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH--------
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHH--------
Confidence 68999999999999999999999997 9999998632 11110 23567777888877 776666543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---CcceehhhHHHHHHHHHH----CC---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---PTTVMSEGMKNIVTAMKE----YN--- 143 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---~~~~~~~~~~~ll~~~~~----~~--- 143 (189)
+.+.++++|++|+++|...... ..++|+.++.++++++.. .+
T Consensus 78 ----------------------------~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~ 129 (254)
T 1sby_A 78 ----------------------------IFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGP 129 (254)
T ss_dssp ----------------------------HHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC
T ss_pred ----------------------------HHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCC
Confidence 2345568999999999654322 245788888887777653 22
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++||++||..++... +....|..+|...+.+.+
T Consensus 130 ~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 163 (254)
T 1sby_A 130 GGIIANICSVTGFNAI----HQVPVYSASKAAVVSFTN 163 (254)
T ss_dssp CEEEEEECCGGGTSCC----TTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECchhhccCC----CCchHHHHHHHHHHHHHH
Confidence 4689999998876432 223457777777766554
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=7.7e-15 Score=114.21 Aligned_cols=140 Identities=14% Similarity=0.088 Sum_probs=91.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------------------cCCceeEEeccccChhHHHHh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------------------YHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------------------~~~~~~~~~~d~~~~~~~~~~ 62 (189)
|+++||||+|+||++++++|+++|++|++++|+....... ...++.++.+|++++++++++
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 5799999999999999999999999999999864322110 012344444444444444444
Q ss_pred hhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh
Q psy3626 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG 131 (189)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~ 131 (189)
++. +.+.++++|++|+++|.....+. .++|+.+
T Consensus 92 ~~~------------------------------------~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g 135 (277)
T 3tsc_A 92 VDD------------------------------------GVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTG 135 (277)
T ss_dssp HHH------------------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred HHH------------------------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHH
Confidence 322 23344579999999997654321 2367777
Q ss_pred HHHHHHH----HHHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 132 MKNIVTA----MKEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 132 ~~~ll~~----~~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++++ +++.+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 136 ~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 186 (277)
T 3tsc_A 136 TWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ----PFMIHYTASKHAVTGLAR 186 (277)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----SSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC----CCchhhHHHHHHHHHHHH
Confidence 6666555 45544 5799999998876432 233457777777766554
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.5e-15 Score=113.84 Aligned_cols=140 Identities=21% Similarity=0.122 Sum_probs=98.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+.++ ...++.++.+|++++++++++++.
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~------------- 76 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEA------------- 76 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH-------------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHH-------------
Confidence 5899999999999999999999999999999987655432 235677888888888887777653
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------------cceehhhHHHHHHHH----HHC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------------TTVMSEGMKNIVTAM----KEY 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~ll~~~----~~~ 142 (189)
+.+.+++.|++|+++|....... .++|+.++.++.+++ ++.
T Consensus 77 -----------------------~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 133 (261)
T 3n74_A 77 -----------------------ALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKEN 133 (261)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred -----------------------HHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 24455678999999986542211 236777755555544 433
Q ss_pred C----ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N----VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~----~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ ..++|++||..+.... +....|..+|...+.+.+
T Consensus 134 ~~~~~~~~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 172 (261)
T 3n74_A 134 GAKGQECVILNVASTGAGRPR----PNLAWYNATKGWVVSVTK 172 (261)
T ss_dssp HHTTCCEEEEEECCTTTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEeCchhhcCCC----CCccHHHHHHHHHHHHHH
Confidence 2 4589999998765421 223346677777665554
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.9e-15 Score=116.25 Aligned_cols=139 Identities=19% Similarity=0.163 Sum_probs=100.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+.++ ...++.++.+|++++++++++++.+
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~------------ 73 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERC------------ 73 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHH------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHH------------
Confidence 5899999999999999999999999999999986654432 2356788888999988888777543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------------cceehhhHHHHHHHH---
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------------TTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------------~~~~~~~~~~ll~~~--- 139 (189)
.+.+++.|++|+++|......+ .++|+.++.++.+++
T Consensus 74 ------------------------~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 129 (281)
T 3zv4_A 74 ------------------------LAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPA 129 (281)
T ss_dssp ------------------------HHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ------------------------HHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4556788999999986432211 236777766666655
Q ss_pred -HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ +++|++||..+.... .....|..+|...+.+.+
T Consensus 130 ~~~~~-g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 167 (281)
T 3zv4_A 130 LVSSR-GSVVFTISNAGFYPN----GGGPLYTATKHAVVGLVR 167 (281)
T ss_dssp HHHHT-CEEEEECCGGGTSSS----SSCHHHHHHHHHHHHHHH
T ss_pred HHhcC-CeEEEEecchhccCC----CCCchhHHHHHHHHHHHH
Confidence 3333 699999998875432 223356777777766655
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.6e-15 Score=113.59 Aligned_cols=140 Identities=18% Similarity=0.060 Sum_probs=97.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-c------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-E------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+.....+ + ...++.++.+|++++++++++++.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--------- 100 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT--------- 100 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH---------
Confidence 589999999999999999999999999999996432211 1 124567777888887777766643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~~ 139 (189)
+.+..+++|++|+++|....... .++|+.++.++ ++.+
T Consensus 101 ---------------------------~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 153 (271)
T 4iin_A 101 ---------------------------IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVM 153 (271)
T ss_dssp ---------------------------HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 23445678999999987654321 23566665554 4445
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 154 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 191 (271)
T 4iin_A 154 SKSRFGSVVNVASIIGERGN----MGQTNYSASKGGMIAMSK 191 (271)
T ss_dssp HHHTCEEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred hhcCCCEEEEEechhhcCCC----CCchHhHHHHHHHHHHHH
Confidence 55667899999998876532 233457777777765554
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=112.96 Aligned_cols=141 Identities=13% Similarity=0.074 Sum_probs=99.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++++... .... ...++.++.+|++++++++++++.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~--------- 102 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE--------- 102 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH---------
Confidence 579999999999999999999999999998776422 2111 134567778888888777776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++++...
T Consensus 103 ---------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 155 (271)
T 3v2g_A 103 ---------------------------TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHL 155 (271)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred ---------------------------HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 24556689999999987543321 247888888888877653
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++|++||..+.... .+....|..+|...+.+.+
T Consensus 156 ~~~g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~ 192 (271)
T 3v2g_A 156 GDGGRIITIGSNLAELVP---WPGISLYSASKAALAGLTK 192 (271)
T ss_dssp CTTCEEEEECCGGGTCCC---STTCHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEEeChhhccCC---CCCchHHHHHHHHHHHHHH
Confidence 35799999987653321 1234457777777766554
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.3e-16 Score=119.99 Aligned_cols=139 Identities=17% Similarity=0.122 Sum_probs=98.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+.+........++.++.+|++++++++++++..
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--------------- 74 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLA--------------- 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHH---------------
Confidence 57999999999999999999999999999999654443334567888999999998888777532
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC---------------CCcceehhhHHHHHHHHHH-----
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL---------------SPTTVMSEGMKNIVTAMKE----- 141 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~---------------~~~~~~~~~~~~ll~~~~~----- 141 (189)
.+ +++.|++|+++|..... ...++|+.++.++.+++..
T Consensus 75 ---------------------~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 132 (257)
T 3tl3_A 75 ---------------------ET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKT 132 (257)
T ss_dssp ---------------------HH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ---------------------HH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHh
Confidence 23 56889999999854211 1134777777777666543
Q ss_pred -------CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 -------YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 -------~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 133 ~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 175 (257)
T 3tl3_A 133 EPVGPNAEERGVIINTASVAAFDGQ----IGQAAYSASKGGVVGMTL 175 (257)
T ss_dssp CCC--CCCCSEEEEEECCCC--CCH----HHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCcEEEEEcchhhcCCC----CCCccHHHHHHHHHHHHH
Confidence 345699999998876421 123356677777665554
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-15 Score=114.94 Aligned_cols=142 Identities=15% Similarity=0.135 Sum_probs=103.0
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCC-Ccc-------cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRL-PSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
|+++||||+ |+||++++++|+++|++|++++|+.... .+. ...++.++.+|++++++++++++..
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~----- 95 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV----- 95 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH-----
Confidence 589999999 8999999999999999999999886544 111 1356778888888888887777543
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH-
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM- 139 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~- 139 (189)
.+.+++.|++|+++|....... .++|+.++.++++++
T Consensus 96 -------------------------------~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 144 (267)
T 3gdg_A 96 -------------------------------VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVG 144 (267)
T ss_dssp -------------------------------HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred -------------------------------HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 4556678999999986554321 236777766666555
Q ss_pred ---HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 ---KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ---~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+... ..+.....|..+|...+.+.+
T Consensus 145 ~~~~~~~~g~iv~isS~~~~~~--~~~~~~~~Y~~sK~a~~~~~~ 187 (267)
T 3gdg_A 145 HHFKERGTGSLVITASMSGHIA--NFPQEQTSYNVAKAGCIHMAR 187 (267)
T ss_dssp HHHHHHTCCEEEEECCGGGTSC--CSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCceEEEEcccccccc--CCCCCCCcchHHHHHHHHHHH
Confidence 5666689999999876543 223345567778877776655
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=113.32 Aligned_cols=138 Identities=13% Similarity=0.072 Sum_probs=96.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|++. .... ...++.++.+|++++++++++.+.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~---------- 100 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEE---------- 100 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH----------
Confidence 57999999999999999999999999999997632 1111 124567777888887776665321
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----H
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM----K 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~----~ 140 (189)
.+..+++|++|+++|.....+. .++|+.++.++++++ +
T Consensus 101 ---------------------------~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 153 (273)
T 3uf0_A 101 ---------------------------LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAML 153 (273)
T ss_dssp ---------------------------HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 1234678999999987654321 236777776665544 5
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..++... +....|..+|...+.+.+
T Consensus 154 ~~~~g~IV~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 190 (273)
T 3uf0_A 154 AHGSGRIVTIASMLSFQGG----RNVAAYAASKHAVVGLTR 190 (273)
T ss_dssp HHTCEEEEEECCGGGTSCC----SSCHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEcchHhcCCC----CCChhHHHHHHHHHHHHH
Confidence 5667899999998876432 233457777777766554
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-15 Score=117.31 Aligned_cols=140 Identities=21% Similarity=0.122 Sum_probs=104.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||+++++.|+++|.+|++.+|+++.+++. ...+...+.+|++++++++++++.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~------------- 96 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEK------------- 96 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHH-------------
Confidence 5799999999999999999999999999999987665433 245677889999999998887754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHHHHHHHHHC--Ccc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~ll~~~~~~--~~~ 145 (189)
+.+.+++.|++|+++|.....+.. ++|+.++..+.+++... ..+
T Consensus 97 -----------------------~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G 153 (273)
T 4fgs_A 97 -----------------------VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGS 153 (273)
T ss_dssp -----------------------HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred -----------------------HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCC
Confidence 456778999999999976544322 36777766666655432 246
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|.+||..+....+ ....|..+|..+..+.+
T Consensus 154 ~IInisS~~~~~~~~----~~~~Y~asKaav~~ltr 185 (273)
T 4fgs_A 154 SVVLTGSTAGSTGTP----AFSVYAASKAALRSFAR 185 (273)
T ss_dssp EEEEECCGGGGSCCT----TCHHHHHHHHHHHHHHH
T ss_pred eEEEEeehhhccCCC----CchHHHHHHHHHHHHHH
Confidence 899999988754322 23457777777766555
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.8e-15 Score=113.97 Aligned_cols=139 Identities=9% Similarity=0.014 Sum_probs=102.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+++||+++++.|+++|.+|.+.+|+.+..... ...+..++.+|++++++++++++.
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~----------- 76 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQ----------- 76 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH-----------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHH-----------
Confidence 6899999999999999999999999999999987654321 245678899999999998887754
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhH----HHHHHHHHHC
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGM----KNIVTAMKEY 142 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~----~~ll~~~~~~ 142 (189)
+.+.+++.|++|+++|....... .++|+.++ +.+++.+++.
T Consensus 77 -------------------------~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 131 (258)
T 4gkb_A 77 -------------------------TIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT 131 (258)
T ss_dssp -------------------------HHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred -------------------------HHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 35678899999999996543221 12555554 4455566555
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ +++|.+||..+....+ ....|..+|..+..+.+
T Consensus 132 ~-G~IVnisS~~~~~~~~----~~~~Y~asKaav~~ltr 165 (258)
T 4gkb_A 132 R-GAIVNISSKTAVTGQG----NTSGYCASKGAQLALTR 165 (258)
T ss_dssp T-CEEEEECCTHHHHCCS----SCHHHHHHHHHHHHHHH
T ss_pred C-CeEEEEeehhhccCCC----CchHHHHHHHHHHHHHH
Confidence 5 7999999998765322 23457777777766555
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=9e-15 Score=114.99 Aligned_cols=139 Identities=15% Similarity=0.111 Sum_probs=95.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----------cCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----------YHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|+++||||+|+||++++++|+++|++|++++|+++..... ...++.++.+|++++++++++++..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---- 94 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST---- 94 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH----
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH----
Confidence 5899999999999999999999999999999986443211 1245677777777777776666432
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~ 139 (189)
.+.++++|++||++|.....+ ..++|+.++.++++++
T Consensus 95 --------------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 142 (303)
T 1yxm_A 95 --------------------------------LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAV 142 (303)
T ss_dssp --------------------------------HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred --------------------------------HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 344567899999998543221 1347888888888876
Q ss_pred HH----CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KE----YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~----~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.. .+.+++|++||.. ... .| ....|...|...+.+.+
T Consensus 143 ~~~~~~~~~~~iv~isS~~-~~~---~~-~~~~Y~~sK~a~~~~~~ 183 (303)
T 1yxm_A 143 YSSWMKEHGGSIVNIIVPT-KAG---FP-LAVHSGAARAGVYNLTK 183 (303)
T ss_dssp HHHTHHHHCEEEEEECCCC-TTC---CT-TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEEeec-ccC---CC-cchhhHHHHHHHHHHHH
Confidence 54 2357999999987 321 11 22345556665554443
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.58 E-value=6.6e-15 Score=114.09 Aligned_cols=140 Identities=13% Similarity=0.060 Sum_probs=98.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCc------ccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPS------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+... ... ....++.++.+|++++++++++++.
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~--------- 96 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEK--------- 96 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH---------
Confidence 579999999999999999999999999999854322 111 1134577888888888887776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.+++.|++|+++|....... .++|+.++.++++.+
T Consensus 97 ---------------------------~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 149 (269)
T 3gk3_A 97 ---------------------------VLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGM 149 (269)
T ss_dssp ---------------------------HHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34556689999999986543321 236777766655554
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 150 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 187 (269)
T 3gk3_A 150 VERRFGRIVNIGSVNGSRGA----FGQANYASAKAGIHGFTK 187 (269)
T ss_dssp HHHTCEEEEEECCHHHHHCC----TTBHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEeCChhhccCC----CCcchHHHHHHHHHHHHH
Confidence 45566899999998876532 233457777776665554
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=4.3e-14 Score=110.39 Aligned_cols=155 Identities=12% Similarity=0.026 Sum_probs=93.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|++......... .....+++.+++..+...
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-------------- 72 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDT-----AIPASTPEDLAETADLVK-------------- 72 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCC-----SSCCCCHHHHHHHHHHHH--------------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEecccccccccccc-----ccccCCHHHHHHHHHHHh--------------
Confidence 5799999999999999999999999999999985433211000 000011122222111100
Q ss_pred CccccCceeEEeccccCHHHHHHH-------hcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHH---
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKA-------IEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAM--- 139 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~--- 139 (189)
....++..+.+|+.+++++.+. ++++|++|+++|...... ..++|+.++.++.+++
T Consensus 73 --~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 150 (286)
T 3uve_A 73 --GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPH 150 (286)
T ss_dssp --TTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred --hcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 0012445555555555544443 458999999999754332 1236777766665554
Q ss_pred -HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 -KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 -~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 151 ~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 190 (286)
T 3uve_A 151 MIAGGRGGSIILTSSVGGLKAY----PHTGHYVAAKHGVVGLMR 190 (286)
T ss_dssp HHHHTSCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHhCCCCcEEEEECchhhccCC----CCccHHHHHHHHHHHHHH
Confidence 4433 5799999998876432 223457777777665554
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=4.9e-15 Score=115.75 Aligned_cols=140 Identities=15% Similarity=0.088 Sum_probs=95.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-------CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+.... ..++.++.+|++++++++++++.
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~--------- 99 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ--------- 99 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHH---------
Confidence 58999999999999999999999999999999865543221 12567777888887777766643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEe-eccCCCCC----------CcceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA-LGTRNDLS----------PTTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~-~~~~~~~~----------~~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.++++|++|++ +|...... ..++|+.++.++++++...
T Consensus 100 ---------------------------~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 152 (286)
T 1xu9_A 100 ---------------------------AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPML 152 (286)
T ss_dssp ---------------------------HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 23445578888888 45432210 1236777777766655321
Q ss_pred --CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 --NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 --~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..+.... +....|..+|...+.+.+
T Consensus 153 ~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 189 (286)
T 1xu9_A 153 KQSNGSIVVVSSLAGKVAY----PMVAAYSASKFALDGFFS 189 (286)
T ss_dssp HHHTCEEEEEEEGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEEECCcccccCC----CCccHHHHHHHHHHHHHH
Confidence 23799999998765421 233456777777665543
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=112.81 Aligned_cols=140 Identities=13% Similarity=0.089 Sum_probs=92.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++|+ ++..... ...++.++.+|++++++++++++.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~--------- 100 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDA--------- 100 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH---------
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH---------
Confidence 469999999999999999999999999999864 3222211 134677888888888887777753
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC--CCC-----------CcceehhhHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN--DLS-----------PTTVMSEGMKNIVTA--- 138 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~--~~~-----------~~~~~~~~~~~ll~~--- 138 (189)
+.+.++++|++|+++|... ..+ ..++|+.++.++.++
T Consensus 101 ---------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 153 (280)
T 4da9_A 101 ---------------------------VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLK 153 (280)
T ss_dssp ---------------------------HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3455668899999998731 111 134777777655554
Q ss_pred -HHHCC---ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 -MKEYN---VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 -~~~~~---~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 154 ~~~~~~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 196 (280)
T 4da9_A 154 AMLASDARASRSIINITSVSAVMTS----PERLDYCMSKAGLAAFSQ 196 (280)
T ss_dssp HHHHHCCCCCEEEEEECCC-----------CCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEEEcchhhccCC----CCccHHHHHHHHHHHHHH
Confidence 44433 5699999998876532 223457777777765554
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.3e-15 Score=116.52 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=98.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++.+.+. ...++.++.+|++++++++++++.+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------------ 74 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEA------------ 74 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHH------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHH------------
Confidence 5899999999999999999999999999999986544322 1245778888999888888777543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC--Ccc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~--~~~ 145 (189)
.+.+++.|++|+++|.....+. .++|+.++.++.+++... ..+
T Consensus 75 ------------------------~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 130 (263)
T 2a4k_A 75 ------------------------LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGG 130 (263)
T ss_dssp ------------------------HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred ------------------------HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 4456778999999986543211 237788888887777653 146
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+||++||..++ .. +....|..+|...+.+.+
T Consensus 131 ~iv~isS~~~~-~~----~~~~~Y~asK~a~~~~~~ 161 (263)
T 2a4k_A 131 SLVLTGSVAGL-GA----FGLAHYAAGKLGVVGLAR 161 (263)
T ss_dssp EEEEECCCTTC-CH----HHHHHHHHCSSHHHHHHH
T ss_pred EEEEEecchhc-CC----CCcHHHHHHHHHHHHHHH
Confidence 99999998765 21 122345555655544443
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=111.81 Aligned_cols=140 Identities=11% Similarity=0.053 Sum_probs=97.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC-CCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-PQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~-~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|+++.++ .+..... ...++.++.+|++++++++++++.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~--------- 97 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH--------- 97 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH---------
Confidence 579999999999999999999999999776544 3222211 124567778888888777776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH---
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK--- 140 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~--- 140 (189)
+.+.+++.|++|+++|....... .++|+.++.++++.+.
T Consensus 98 ---------------------------~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 150 (267)
T 4iiu_A 98 ---------------------------EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPM 150 (267)
T ss_dssp ---------------------------HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 23445688999999987654321 2477778777777652
Q ss_pred --HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 --EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 --~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 151 ~~~~~~g~iv~isS~~~~~~~~----~~~~Y~asKaa~~~~~~ 189 (267)
T 4iiu_A 151 IGARQGGRIITLSSVSGVMGNR----GQVNYSAAKAGIIGATK 189 (267)
T ss_dssp HHHTSCEEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HhcCCCcEEEEEcchHhccCCC----CCchhHHHHHHHHHHHH
Confidence 55668999999988765322 23456667776655443
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=110.18 Aligned_cols=135 Identities=13% Similarity=0.091 Sum_probs=99.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHH-cCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALK-QGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
||+++||||+|+||++++++|++ .|++|++.+|+++... ..+.++.+|++++++++++++..+
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~------------ 67 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA----ENLKFIKADLTKQQDITNVLDIIK------------ 67 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC----TTEEEEECCTTCHHHHHHHHHHTT------------
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc----ccceEEecCcCCHHHHHHHHHHHH------------
Confidence 67899999999999999999999 6899999998865222 456889999999998888774331
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHCC--ccE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEYN--VSV 146 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~~--~~~ 146 (189)
..++|++|+++|.....+. .++|+.++.++++++...- .++
T Consensus 68 --------------------------~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~ 121 (244)
T 4e4y_A 68 --------------------------NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGAS 121 (244)
T ss_dssp --------------------------TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEE
T ss_pred --------------------------hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcE
Confidence 2357889998886543211 2478888888888876542 258
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..++... +....|..+|...+.+.+
T Consensus 122 iv~~sS~~~~~~~----~~~~~Y~asKaa~~~~~~ 152 (244)
T 4e4y_A 122 IVFNGSDQCFIAK----PNSFAYTLSKGAIAQMTK 152 (244)
T ss_dssp EEEECCGGGTCCC----TTBHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHccCC----CCCchhHHHHHHHHHHHH
Confidence 9999998876432 223457777777766655
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=9.6e-15 Score=112.61 Aligned_cols=139 Identities=13% Similarity=-0.017 Sum_probs=96.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+||++++++|+++|++|++++|+++...... ..++.++.+|++++++++++++.+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--------- 76 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQV--------- 76 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHH---------
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHH---------
Confidence 57999999999999999999999999999999865443221 245678888888888877776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHH-HhcCCCEEEEeecc--C-------CCC---CC------cceehhhH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKK-AIEGKDGVVVALGT--R-------NDL---SP------TTVMSEGM---- 132 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~vv~~~~~--~-------~~~---~~------~~~~~~~~---- 132 (189)
.+ .+++.|++|+++|. . .+. .. .++|+.++
T Consensus 77 ---------------------------~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 129 (260)
T 2qq5_A 77 ---------------------------DREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCS 129 (260)
T ss_dssp ---------------------------HHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHH
T ss_pred ---------------------------HHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHH
Confidence 22 25678999999942 1 111 11 12555555
Q ss_pred HHHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 133 KNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 133 ~~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++.+++.+.++||++||..+... .....|..+|...+.+.+
T Consensus 130 ~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~Y~asK~a~~~~~~ 173 (260)
T 2qq5_A 130 VYGARLMVPAGQGLIVVISSPGSLQY-----MFNVPYGVGKAACDKLAA 173 (260)
T ss_dssp HHHHHHHGGGTCCEEEEECCGGGTSC-----CSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCcEEEEEcChhhcCC-----CCCCchHHHHHHHHHHHH
Confidence 44455555666789999999876542 223457777777766654
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=113.70 Aligned_cols=140 Identities=12% Similarity=0.014 Sum_probs=91.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------------------cCCceeEEeccccChhHHHHhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------------------YHSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------------------~~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|+++||||+|+||++++++|+++|++|++++|++...... ...++.++.+|+++++++++++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 108 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV 108 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence 5899999999999999999999999999999874321100 1123444455555554444444
Q ss_pred hcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------Ccceehhh
Q psy3626 64 EGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEG 131 (189)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~ 131 (189)
+. +.+.++++|++|+++|...... ..++|+.+
T Consensus 109 ~~------------------------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g 152 (299)
T 3t7c_A 109 DD------------------------------------GVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNG 152 (299)
T ss_dssp HH------------------------------------HHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHH
T ss_pred HH------------------------------------HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHH
Confidence 32 2334458999999999654332 12367777
Q ss_pred HHHHHHHH----HHC-CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 132 MKNIVTAM----KEY-NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 132 ~~~ll~~~----~~~-~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++.+++ .+. +.++||++||..+.... +....|..+|...+.+.+
T Consensus 153 ~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 203 (299)
T 3t7c_A 153 AWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA----ENIGNYIASKHGLHGLMR 203 (299)
T ss_dssp HHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEECChhhccCC----CCcchHHHHHHHHHHHHH
Confidence 66666554 444 36799999998876432 223457777777665554
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=112.34 Aligned_cols=141 Identities=13% Similarity=0.040 Sum_probs=99.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|+++.++. +..... ...++.++.+|++++++++++++.+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------- 80 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA-------- 80 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH--------
Confidence 5899999999999999999999999999985543 222211 1345777888888888877777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-C-----------CcceehhhHHHHHHHHHHC
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-S-----------PTTVMSEGMKNIVTAMKEY 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~-----------~~~~~~~~~~~ll~~~~~~ 142 (189)
.+.+++.|++|+++|..... . ..++|+.++.++.+++...
T Consensus 81 ----------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 132 (259)
T 3edm_A 81 ----------------------------ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK 132 (259)
T ss_dssp ----------------------------HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ----------------------------HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566889999999865221 1 1247888888888888765
Q ss_pred C--ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N--VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~--~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
- .+++|++||..+.... .+....|..+|...+.+.+
T Consensus 133 ~~~~g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~l~~ 170 (259)
T 3edm_A 133 MAKGGAIVTFSSQAGRDGG---GPGALAYATSKGAVMTFTR 170 (259)
T ss_dssp EEEEEEEEEECCHHHHHCC---STTCHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEcCHHhccCC---CCCcHHHHHHHHHHHHHHH
Confidence 2 3599999998876211 1233457777777766555
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.56 E-value=2e-14 Score=112.95 Aligned_cols=140 Identities=13% Similarity=0.139 Sum_probs=100.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC--CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR--LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+|+||++++++|+++|++|++.+|+.+. .... ...++.++.+|++++++++++++.
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-------- 121 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK-------- 121 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH--------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH--------
Confidence 589999999999999999999999999999886321 1111 134567778888888877776643
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC------------CcceehhhHHHHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS------------PTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~------------~~~~~~~~~~~ll~~~~~ 141 (189)
+.+.++++|++|+++|...... ..++|+.++.++++++..
T Consensus 122 ----------------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 173 (294)
T 3r3s_A 122 ----------------------------AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIP 173 (294)
T ss_dssp ----------------------------HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ----------------------------HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3455678999999999654221 134788888898888865
Q ss_pred CC--ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YN--VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~--~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.- .++||++||..++... +....|..+|...+.+.+
T Consensus 174 ~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 211 (294)
T 3r3s_A 174 LLPKGASIITTSSIQAYQPS----PHLLDYAATKAAILNYSR 211 (294)
T ss_dssp GCCTTCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhhcCCEEEEECChhhccCC----CCchHHHHHHHHHHHHHH
Confidence 42 3599999999876532 233457777777766554
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.8e-14 Score=111.75 Aligned_cols=141 Identities=11% Similarity=0.012 Sum_probs=99.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++++++... .... ...++.++.+|++++++++++++.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~--------- 89 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ--------- 89 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH---------
Confidence 589999999999999999999999999998775432 2111 234577888888888887777654
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.+++...
T Consensus 90 ---------------------------~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (270)
T 3is3_A 90 ---------------------------AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL 142 (270)
T ss_dssp ---------------------------HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34556688999999987643321 247888888888877653
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+++|++||..+... ..+....|..+|...+.+.+
T Consensus 143 ~~~g~iv~isS~~~~~~---~~~~~~~Y~asKaa~~~~~~ 179 (270)
T 3is3_A 143 TEGGRIVLTSSNTSKDF---SVPKHSLYSGSKGAVDSFVR 179 (270)
T ss_dssp CTTCEEEEECCTTTTTC---CCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEeCchhccC---CCCCCchhHHHHHHHHHHHH
Confidence 2359999999763211 11234457777777766554
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-14 Score=114.53 Aligned_cols=138 Identities=17% Similarity=0.041 Sum_probs=95.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc------------CCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY------------HSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|+++||||+|+||++++++|+++|++|+++.|+........ ..++.++.+|++++++++++++...
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~-- 80 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-- 80 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--
Confidence 68999999999999999999999999998888755443210 1345666777777776666665430
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHH
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTA 138 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~ 138 (189)
.+++|++||++|.....+ ..++|+.++.+++++
T Consensus 81 ------------------------------------~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 124 (327)
T 1jtv_A 81 ------------------------------------EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124 (327)
T ss_dssp ------------------------------------TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ------------------------------------cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 134789999988643221 124777777776666
Q ss_pred ----HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 ----MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ----~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 125 ~~p~m~~~~~g~IV~isS~~~~~~~----~~~~~Y~aSK~a~~~~~~ 167 (327)
T 1jtv_A 125 FLPDMKRRGSGRVLVTGSVGGLMGL----PFNDVYCASKFALEGLCE 167 (327)
T ss_dssp HHHHHHHHTCEEEEEEEEGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCcccccCC----CCChHHHHHHHHHHHHHH
Confidence 455667899999998775432 223457777777766554
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.1e-15 Score=115.00 Aligned_cols=140 Identities=11% Similarity=0.088 Sum_probs=95.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc---c------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS---E------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+||++++++|+++|++|++++|.....+. + ...++.++.+|++++++++++++.
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~------- 84 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF------- 84 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH-------
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH-------
Confidence 579999999999999999999999999999875432211 1 124567777888887777776643
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~ 141 (189)
+.+.+++.|++|+++|.....+. .++|+.++.++.+++..
T Consensus 85 -----------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 135 (262)
T 3ksu_A 85 -----------------------------AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAK 135 (262)
T ss_dssp -----------------------------HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 23455688999999996544321 23788888888888876
Q ss_pred C--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 Y--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
. +.+++|++||..+....+ ....|..+|...+.+.+
T Consensus 136 ~m~~~g~iv~isS~~~~~~~~----~~~~Y~asKaa~~~l~~ 173 (262)
T 3ksu_A 136 HMNPNGHIITIATSLLAAYTG----FYSTYAGNKAPVEHYTR 173 (262)
T ss_dssp TEEEEEEEEEECCCHHHHHHC----CCCC-----CHHHHHHH
T ss_pred hhcCCCEEEEEechhhccCCC----CCchhHHHHHHHHHHHH
Confidence 4 457999999987765322 22346666666655544
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=3.3e-14 Score=118.98 Aligned_cols=146 Identities=14% Similarity=0.126 Sum_probs=101.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCCCCCCc-------c--cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDPQRLPS-------E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~-------~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
++++||||+|+||++++++|+++|++ |++++|++..... + .+.++.++.+|++|+++++++++....
T Consensus 227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~--- 303 (486)
T 2fr1_A 227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD--- 303 (486)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT---
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh---
Confidence 58999999999999999999999995 8999998643211 1 123566777777777777766655410
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMK 140 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~ 140 (189)
..+.|++||++|...... ...+|+.++.++.++++
T Consensus 304 ----------------------------------~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~ 349 (486)
T 2fr1_A 304 ----------------------------------DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR 349 (486)
T ss_dssp ----------------------------------TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred ----------------------------------cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 124588999988654321 12368999999999999
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh---hhcCCCCC
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL---KDSGLNYI 188 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l---~~~~~~~t 188 (189)
..+.++||++||..+....+ ....|...|...+.+. +..++.++
T Consensus 350 ~~~~~~~V~~SS~a~~~g~~----g~~~Yaaaka~l~~la~~~~~~gi~v~ 396 (486)
T 2fr1_A 350 ELDLTAFVLFSSFASAFGAP----GLGGYAPGNAYLDGLAQQRRSDGLPAT 396 (486)
T ss_dssp TSCCSEEEEEEEHHHHTCCT----TCTTTHHHHHHHHHHHHHHHHTTCCCE
T ss_pred cCCCCEEEEEcChHhcCCCC----CCHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 88889999999987765422 2234666665554333 34566554
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=6.4e-15 Score=114.93 Aligned_cols=144 Identities=17% Similarity=0.050 Sum_probs=94.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------------------cCCceeEEeccccChhHHHHhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------------------YHSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------------------~~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|+++||||+|+||++++++|+++|++|++++|+....... ...++.++.+|+++++++++++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 5799999999999999999999999999999874322110 1123444455555554444444
Q ss_pred hcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC---------CcceehhhHHH
Q psy3626 64 EGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS---------PTTVMSEGMKN 134 (189)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~---------~~~~~~~~~~~ 134 (189)
+. +.+.++++|++|+++|...... ..++|+.++.+
T Consensus 91 ~~------------------------------------~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~ 134 (287)
T 3pxx_A 91 AN------------------------------------AVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVIN 134 (287)
T ss_dssp HH------------------------------------HHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHH
T ss_pred HH------------------------------------HHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHH
Confidence 32 2233458999999999754321 13488888888
Q ss_pred HHHHHHHC--CccEEEEeccceeecCCCCCC-------CCCccchhhHHHHHHHhh
Q psy3626 135 IVTAMKEY--NVSVVSVCLSAFLFYEPSKVP-------PMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 ll~~~~~~--~~~~~i~iSS~~~~~~~~~~p-------~~~~~~~~~~~~~~~~l~ 181 (189)
+++++... +.+++|++||..+.......+ +....|..+|...+.+.+
T Consensus 135 l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~ 190 (287)
T 3pxx_A 135 TVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTL 190 (287)
T ss_dssp HHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHH
Confidence 88888764 346999999987754321111 223346667776665554
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-14 Score=112.57 Aligned_cols=140 Identities=9% Similarity=0.028 Sum_probs=98.5
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCC---CCccc--CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQR---LPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~---~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+ |+||+++++.|+++|++|++++|+++. ...+. ..++.++.+|++++++++++++.+
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~-------- 93 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFL-------- 93 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHH--------
Confidence 479999999 999999999999999999999998631 11110 123567888888888877766432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~ 139 (189)
.+.++++|++||++|.... .+ ..++|+.++.++++++
T Consensus 94 ----------------------------~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 145 (285)
T 2p91_A 94 ----------------------------EENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTREL 145 (285)
T ss_dssp ----------------------------HHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 3445678999999986532 11 1247888888888887
Q ss_pred HHC---CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY---NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~---~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... +.++||++||..+.... +....|..+|...+.+.+
T Consensus 146 ~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 186 (285)
T 2p91_A 146 LPLMEGRNGAIVTLSYYGAEKVV----PHYNVMGIAKAALESTVR 186 (285)
T ss_dssp GGGGTTSCCEEEEEECGGGTSBC----TTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEccchhccCC----CCccHHHHHHHHHHHHHH
Confidence 653 23799999998765422 223457777777766554
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=112.94 Aligned_cols=140 Identities=15% Similarity=0.062 Sum_probs=99.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC-CCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ-RLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~-~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++..++.. ....+ ...++.++.+|++++++++++++.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~--------- 98 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFAT--------- 98 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH---------
Confidence 57999999999999999999999999998855433 22211 134577788888888887777653
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.++++|++|+++|.....+. .++|+.++.++++++...
T Consensus 99 ---------------------------~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~ 151 (267)
T 3u5t_A 99 ---------------------------AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL 151 (267)
T ss_dssp ---------------------------HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556688999999987543321 237888888888777543
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+++|++||..+.... +....|..+|...+.+.+
T Consensus 152 ~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 187 (267)
T 3u5t_A 152 RVGGRIINMSTSQVGLLH----PSYGIYAAAKAGVEAMTH 187 (267)
T ss_dssp EEEEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred hhCCeEEEEeChhhccCC----CCchHHHHHHHHHHHHHH
Confidence 23699999998776532 233457777777776655
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-14 Score=113.95 Aligned_cols=140 Identities=11% Similarity=0.010 Sum_probs=96.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEe-cCCCCCCcc-------cCCceeEEeccccChh----------------
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLL-RDPQRLPSE-------YHSKVEIIQGDVLKLA---------------- 57 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~-------~~~~~~~~~~d~~~~~---------------- 57 (189)
|+++||||+|+||++++++|+++|++|++++ |+++..... ...++.++.+|+++++
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 126 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 126 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence 5799999999999999999999999999999 876543321 1346778889998887
Q ss_pred -HHHHhhhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------------
Q psy3626 58 -DVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------------ 124 (189)
Q Consensus 58 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------------ 124 (189)
+++++++. +.+.++++|++|+++|.....+.
T Consensus 127 ~~v~~~~~~------------------------------------~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~ 170 (328)
T 2qhx_A 127 TRCAELVAA------------------------------------CYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 170 (328)
T ss_dssp HHHHHHHHH------------------------------------HHHHHSCCCEEEECCCCCCCCCSCC----------
T ss_pred HHHHHHHHH------------------------------------HHHhcCCCCEEEECCCCCCCCChhhcCcccccccc
Confidence 55555432 23445678999999886432211
Q ss_pred -------------cceehhhHHHHHHH----HHHCC------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 125 -------------TTVMSEGMKNIVTA----MKEYN------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 125 -------------~~~~~~~~~~ll~~----~~~~~------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++|+.++.+++++ +++.+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 171 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~----~~~~~Y~asKaal~~l~~ 246 (328)
T 2qhx_A 171 GDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----LGYTIYTMAKGALEGLTR 246 (328)
T ss_dssp ---CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC----CCcHHHHHHHHHHHHHHH
Confidence 13566665555554 44555 6899999998765421 233457777777766554
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=9.9e-15 Score=112.63 Aligned_cols=140 Identities=14% Similarity=0.096 Sum_probs=98.9
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCC---CCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQ---RLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~---~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+ |+||++++++|+++|++|++++|+++ ....+. ...+.++.+|++++++++++++..
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~-------- 80 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV-------- 80 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH--------
Confidence 579999999 99999999999999999999999863 111110 123667788888888777766432
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~ 139 (189)
.+.++++|++||++|.... .+ ..++|+.++.++++++
T Consensus 81 ----------------------------~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 132 (261)
T 2wyu_A 81 ----------------------------KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (261)
T ss_dssp ----------------------------HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 3445678999999986532 10 1247888899999888
Q ss_pred HHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... +.++||++||..+.... +....|..+|...+.+.+
T Consensus 133 ~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 172 (261)
T 2wyu_A 133 EPLLREGGGIVTLTYYASEKVV----PKYNVMAIAKAALEASVR 172 (261)
T ss_dssp TTTEEEEEEEEEEECGGGTSBC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEecccccCCC----CCchHHHHHHHHHHHHHH
Confidence 765 23699999997765421 223457777777766554
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=112.23 Aligned_cols=140 Identities=11% Similarity=0.010 Sum_probs=96.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEe-cCCCCCCcc-------cCCceeEEeccccChh----------------
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLL-RDPQRLPSE-------YHSKVEIIQGDVLKLA---------------- 57 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~-r~~~~~~~~-------~~~~~~~~~~d~~~~~---------------- 57 (189)
|+++||||+|+||++++++|+++|++|++++ |+++..... ...++.++.+|+++++
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 89 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 89 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence 5799999999999999999999999999999 876543321 1346788889998887
Q ss_pred -HHHHhhhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------------
Q psy3626 58 -DVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------------ 124 (189)
Q Consensus 58 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------------ 124 (189)
+++++++. +.+.++++|++|+++|.....+.
T Consensus 90 ~~v~~~~~~------------------------------------~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 133 (291)
T 1e7w_A 90 TRCAELVAA------------------------------------CYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 133 (291)
T ss_dssp HHHHHHHHH------------------------------------HHHHHSCCCEEEECCCCCCCCCCCC----------
T ss_pred HHHHHHHHH------------------------------------HHHhcCCCCEEEECCCCCCCCChhhcCcccccccc
Confidence 66655543 23445678999999886432211
Q ss_pred -------------cceehhhHHHHHHH----HHHCC------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 125 -------------TTVMSEGMKNIVTA----MKEYN------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 125 -------------~~~~~~~~~~ll~~----~~~~~------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++|+.++.+++++ +++.+ .++||++||..+.... +....|..+|...+.+.+
T Consensus 134 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 209 (291)
T 1e7w_A 134 GDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----LGYTIYTMAKGALEGLTR 209 (291)
T ss_dssp ---HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC----CCCchhHHHHHHHHHHHH
Confidence 13566665555554 44555 5899999998765421 223456667776665554
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.5e-14 Score=109.69 Aligned_cols=131 Identities=17% Similarity=0.149 Sum_probs=86.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+ ..+.++ +|+ ++++++
T Consensus 20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~-~D~--~~~~~~-------------------- 74 (249)
T 1o5i_A 20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS--GHRYVV-CDL--RKDLDL-------------------- 74 (249)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT--CSEEEE-CCT--TTCHHH--------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh--CCeEEE-eeH--HHHHHH--------------------
Confidence 6899999999999999999999999999999986322221 233444 565 223332
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
+.+.+.++|++|+++|....... .++|+.+ ++.+++.+++.+.++
T Consensus 75 --------------------~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ 134 (249)
T 1o5i_A 75 --------------------LFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGR 134 (249)
T ss_dssp --------------------HHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred --------------------HHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcE
Confidence 33333467888888875443211 1255555 455677777777789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
||++||..++... +....|..+|...+.+.+
T Consensus 135 iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 165 (249)
T 1o5i_A 135 IVAITSFSVISPI----ENLYTSNSARMALTGFLK 165 (249)
T ss_dssp EEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred EEEEcchHhcCCC----CCCchHHHHHHHHHHHHH
Confidence 9999998876532 223456667776665544
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=2.8e-14 Score=111.59 Aligned_cols=140 Identities=12% Similarity=0.020 Sum_probs=94.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CCCCcc-------cCCceeEEeccccC----hhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QRLPSE-------YHSKVEIIQGDVLK----LADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~~~~~-------~~~~~~~~~~d~~~----~~~~~~~~~~~~~~ 69 (189)
|+++||||+|+||++++++|+++|++|++++|++ +..... ...++.++.+|+++ +++++++++.
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~---- 99 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS---- 99 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH----
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH----
Confidence 5899999999999999999999999999999987 433211 12456777888888 7766666543
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---------------------ccee
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---------------------TTVM 128 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---------------------~~~~ 128 (189)
+.+.++++|++|+++|.....+. .++|
T Consensus 100 --------------------------------~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N 147 (288)
T 2x9g_A 100 --------------------------------CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTN 147 (288)
T ss_dssp --------------------------------HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHH
T ss_pred --------------------------------HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHh
Confidence 23455678999999886432211 1256
Q ss_pred hhhHHHHHHHHH----HCC------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 129 SEGMKNIVTAMK----EYN------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 129 ~~~~~~ll~~~~----~~~------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++.++.+++. +.+ .++||++||..++... +....|..+|...+.+.+
T Consensus 148 ~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 206 (288)
T 2x9g_A 148 AIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC----MAFSLYNMGKHALVGLTQ 206 (288)
T ss_dssp THHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCC----CCCchHHHHHHHHHHHHH
Confidence 666666655553 333 5699999998765421 223456777776665554
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.6e-14 Score=112.23 Aligned_cols=139 Identities=14% Similarity=0.051 Sum_probs=99.3
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCCC----ccc--CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRLP----SEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~----~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+ |+||++++++|+++|++|++++|+++ .. .+. ...+.++.+|++++++++++++..
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 78 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSV------- 78 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH-------
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHH-------
Confidence 589999999 99999999999999999999999875 21 111 123677888888888877766532
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~ll~~ 138 (189)
.+.++++|++|+++|.... .+ ..++|+.++.+++++
T Consensus 79 -----------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 129 (275)
T 2pd4_A 79 -----------------------------KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNT 129 (275)
T ss_dssp -----------------------------HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred -----------------------------HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3445678999999986542 11 124788888888888
Q ss_pred HHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+... ..++||++||..+.... +....|..+|...+.+.+
T Consensus 130 ~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 170 (275)
T 2pd4_A 130 LKPLLNNGASVLTLSYLGSTKYM----AHYNVMGLAKAALESAVR 170 (275)
T ss_dssp HGGGEEEEEEEEEEECGGGTSBC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCEEEEEecchhcCCC----CCchhhHHHHHHHHHHHH
Confidence 8764 23699999997765421 223457777777765554
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-15 Score=112.30 Aligned_cols=134 Identities=15% Similarity=0.056 Sum_probs=92.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+|++|++++++|+++ +|++++|+++....... ....++.+|++++++++++++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--------------- 63 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE--------------- 63 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH---------------
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh---------------
Confidence 58999999999999999999998 99999997644332110 0005556666666555554431
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----------CcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----------PTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----------~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
++++|++|+++|.....+ ..++|+.++.++++++++.+.++||+
T Consensus 64 -------------------------~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~ 118 (207)
T 2yut_A 64 -------------------------AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVF 118 (207)
T ss_dssp -------------------------HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE
T ss_pred -------------------------cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEE
Confidence 126788888877543221 13478889999999997667789999
Q ss_pred eccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 150 CLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 150 iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+||..++... .....|..+|...+.+.+
T Consensus 119 ~sS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 146 (207)
T 2yut_A 119 FGAYPRYVQV----PGFAAYAAAKGALEAYLE 146 (207)
T ss_dssp ECCCHHHHSS----TTBHHHHHHHHHHHHHHH
T ss_pred EcChhhccCC----CCcchHHHHHHHHHHHHH
Confidence 9998876532 234457777777766655
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-14 Score=115.11 Aligned_cols=140 Identities=14% Similarity=0.029 Sum_probs=93.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC----------CCCCcc------cCCceeEEeccccChhHHHHhhhc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP----------QRLPSE------YHSKVEIIQGDVLKLADVKKAIEG 65 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~----------~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~ 65 (189)
|+++||||+|+||++++++|+++|++|++++|+. +..... ...++.++.+|++++++++++++.
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 107 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT 107 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 5799999999999999999999999999999872 111110 123455666666666666655533
Q ss_pred CcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHH
Q psy3626 66 KDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKN 134 (189)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ 134 (189)
+.+.++++|++|+++|....... .++|+.++.+
T Consensus 108 ------------------------------------~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~ 151 (322)
T 3qlj_A 108 ------------------------------------AVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFA 151 (322)
T ss_dssp ------------------------------------HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHH
Confidence 23445588999999997653321 2467777777
Q ss_pred HHHHHHHC----C------ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 135 IVTAMKEY----N------VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 ll~~~~~~----~------~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++++... + .++||++||..+.... .....|..+|...+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----~~~~~Y~asKaal~~l~~ 204 (322)
T 3qlj_A 152 TMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS----VGQGNYSAAKAGIATLTL 204 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC----CCCccHHHHHHHHHHHHH
Confidence 66655321 1 2599999998876532 223457777777766554
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.6e-14 Score=109.63 Aligned_cols=140 Identities=11% Similarity=0.087 Sum_probs=99.6
Q ss_pred ceEEEEcCCCh--hhHHHHHHHHHcCCcEEEEecCCCCCCcc------c-CCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGM--TGLCSLEAALKQGLEVCTLLRDPQRLPSE------Y-HSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+|+ ||++++++|+++|++|++++|+....... . ..++.++.+|++++++++++++..
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------ 81 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI------ 81 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH------
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH------
Confidence 57999999988 99999999999999999999875322211 1 126788888888888887777543
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CCC-----------cceehhhHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~~-----------~~~~~~~~~~ll~ 137 (189)
.+.+++.|++|+++|.... ... .++|+.++.++++
T Consensus 82 ------------------------------~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 131 (266)
T 3oig_A 82 ------------------------------KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVK 131 (266)
T ss_dssp ------------------------------HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ------------------------------HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHH
Confidence 4556678999999986541 111 2367777888888
Q ss_pred HHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++... ..++||++||..+.... +....|..+|...+.+.+
T Consensus 132 ~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 173 (266)
T 3oig_A 132 AARPMMTEGGSIVTLTYLGGELVM----PNYNVMGVAKASLDASVK 173 (266)
T ss_dssp HHGGGCTTCEEEEEEECGGGTSCC----TTTHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCceEEEEecccccccC----CCcchhHHHHHHHHHHHH
Confidence 77654 23699999998876432 233456677777665554
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.9e-14 Score=110.33 Aligned_cols=140 Identities=16% Similarity=0.084 Sum_probs=91.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------------------cCCceeEEeccccChhHHHHhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------------------YHSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------------------~~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|+++||||+|+||+++++.|+++|++|++++|+....... ...++.++.+|+++++++++++
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 126 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV 126 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 5799999999999999999999999999998864322100 0123344444444444444433
Q ss_pred hcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH
Q psy3626 64 EGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM 132 (189)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~ 132 (189)
+. +.+.++++|++|+++|.....+. .++|+.++
T Consensus 127 ~~------------------------------------~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~ 170 (317)
T 3oec_A 127 DE------------------------------------ALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGA 170 (317)
T ss_dssp HH------------------------------------HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHH
T ss_pred HH------------------------------------HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHH
Confidence 22 23344589999999997653321 24677776
Q ss_pred HHHHHHH----HHCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 133 KNIVTAM----KEYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 133 ~~ll~~~----~~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++++++ ++.+ .++||++||..++... +....|..+|...+.+.+
T Consensus 171 ~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 220 (317)
T 3oec_A 171 WHACRAVLPSMIERGQGGSVIFVSSTVGLRGA----PGQSHYAASKHGVQGLML 220 (317)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC----TTBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC----CCCcchHHHHHHHHHHHH
Confidence 6655554 4544 5789999998876532 234457777777766555
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2e-14 Score=110.49 Aligned_cols=136 Identities=12% Similarity=-0.014 Sum_probs=86.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
||+++||||+|+||++++++|+++|++|++++|+++...... ..++..+ +++++++++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~------------ 63 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELI------------ 63 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHH------------
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHH------------
Confidence 889999999999999999999999999999999865433210 0011111 222222222
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccC-CCCCC-----------cceehhhHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTR-NDLSP-----------TTVMSEGMKNIVTAM---- 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~-~~~~~-----------~~~~~~~~~~ll~~~---- 139 (189)
+.+.+.++++|++|+++|.. ...+. .++|+.++.++.+++
T Consensus 64 ------------------------~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 119 (254)
T 1zmt_A 64 ------------------------EAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQM 119 (254)
T ss_dssp ------------------------HHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ------------------------HHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 22334556899999999875 32211 236677766655544
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 120 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 157 (254)
T 1zmt_A 120 KKRKSGHIIFITSATPFGPW----KELSTYTSARAGACTLAN 157 (254)
T ss_dssp HHHTCCEEEEECCSTTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEECCcccccCC----CCchHHHHHHHHHHHHHH
Confidence 45566899999998765432 223457777777765554
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.4e-14 Score=112.57 Aligned_cols=140 Identities=14% Similarity=0.006 Sum_probs=101.4
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+| +||++++++|+++|++|++++|+++..... ....+.++.+|++++++++++++.+
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-------- 102 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVL-------- 102 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHH--------
Confidence 5899999997 999999999999999999999985432211 1134578888888888888777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~ 139 (189)
.+.+++.|++|+++|.... .+ ..++|+.++.++.+++
T Consensus 103 ----------------------------~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 154 (296)
T 3k31_A 103 ----------------------------AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKA 154 (296)
T ss_dssp ----------------------------HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556789999999997642 11 1247888888888887
Q ss_pred HHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... ..++||++||..+.... +.+..|..+|...+.+.+
T Consensus 155 ~~~m~~~g~IV~isS~~~~~~~----~~~~~Y~asKaal~~l~~ 194 (296)
T 3k31_A 155 EPLMTNGGSILTLSYYGAEKVV----PHYNVMGVCKAALEASVK 194 (296)
T ss_dssp GGGCTTCEEEEEEECGGGTSCC----TTTTHHHHHHHHHHHHHH
T ss_pred HHHhhcCCEEEEEEehhhccCC----CCchhhHHHHHHHHHHHH
Confidence 653 24699999998875432 233456777777766554
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=9.7e-15 Score=112.46 Aligned_cols=140 Identities=13% Similarity=0.009 Sum_probs=97.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHH---cCCcEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK---QGLEVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|+++||||+|+||++++++|++ +|++|++++|+++...... ..++.++.+|++++++++++++..
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~---- 82 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV---- 82 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH----
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH----
Confidence 5799999999999999999999 8999999999865443221 245677888888888777766432
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHH--HhcCCC--EEEEeeccCCC--C-----CC-------cceehhhH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKK--AIEGKD--GVVVALGTRND--L-----SP-------TTVMSEGM 132 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d--~vv~~~~~~~~--~-----~~-------~~~~~~~~ 132 (189)
.+ ..++.| ++|+++|.... . .. .++|+.++
T Consensus 83 --------------------------------~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 130 (259)
T 1oaa_A 83 --------------------------------RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSM 130 (259)
T ss_dssp --------------------------------HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHH
T ss_pred --------------------------------HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHH
Confidence 11 123467 88888886432 1 11 23778888
Q ss_pred HHHHHHHHH----C--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 133 KNIVTAMKE----Y--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 133 ~~ll~~~~~----~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++.+++.. . +.++||++||..++... +....|..+|...+.+.+
T Consensus 131 ~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 181 (259)
T 1oaa_A 131 LCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY----KGWGLYCAGKAARDMLYQ 181 (259)
T ss_dssp HHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCceEEEEcCchhcCCC----CCccHHHHHHHHHHHHHH
Confidence 777777753 3 45789999998875421 233457777777776655
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.4e-14 Score=109.82 Aligned_cols=139 Identities=14% Similarity=0.106 Sum_probs=97.1
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCCCc----cc--CCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRLPS----EY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~----~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+ |+||++++++|+++|++|++++|++ ...+ +. .....++.+|++++++++++++..
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~------- 81 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL------- 81 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH-------
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHH-------
Confidence 469999999 9999999999999999999999986 2211 10 123467778888887777666432
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----------CC------CcceehhhHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----------LS------PTTVMSEGMKNIVT 137 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----------~~------~~~~~~~~~~~ll~ 137 (189)
.+.++++|++||++|.... .. ..++|+.++.++++
T Consensus 82 -----------------------------~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 132 (265)
T 1qsg_A 82 -----------------------------GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK 132 (265)
T ss_dssp -----------------------------HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred -----------------------------HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence 2334467889998886432 11 12478888889988
Q ss_pred HHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++... ..++||++||..++... +....|..+|...+.+.+
T Consensus 133 ~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~~sK~a~~~~~~ 174 (265)
T 1qsg_A 133 ACRSMLNPGSALLTLSYLGAERAI----PNYNVMGLAKASLEANVR 174 (265)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSBC----TTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCEEEEEcchhhccCC----CCchHHHHHHHHHHHHHH
Confidence 88764 23699999998765432 223457777777776655
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=5.3e-14 Score=109.65 Aligned_cols=140 Identities=12% Similarity=0.121 Sum_probs=99.1
Q ss_pred ceEEEEcCCCh--hhHHHHHHHHHcCCcEEEEecCC--CCCCcc--cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGM--TGLCSLEAALKQGLEVCTLLRDP--QRLPSE--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~--iG~~l~~~L~~~g~~v~~~~r~~--~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|+ ||++++++|+++|++|++++|+. +....+ ...++.++.+|++++++++++++..
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~--------- 97 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL--------- 97 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH---------
Confidence 58999999966 99999999999999999999987 111111 1235778888999888888777543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----------C------CcceehhhHHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----------S------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----------~------~~~~~~~~~~~ll~~~ 139 (189)
.+.+++.|++|+++|..... . ..++|+.++.++++++
T Consensus 98 ---------------------------~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 150 (280)
T 3nrc_A 98 ---------------------------GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEG 150 (280)
T ss_dssp ---------------------------HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ---------------------------HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556789999999875431 1 1246777777777766
Q ss_pred HHC---CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY---NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~---~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... +.++||++||..+.... +.+..|..+|...+.+.+
T Consensus 151 ~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaal~~~~~ 191 (280)
T 3nrc_A 151 RSMMKNRNASMVALTYIGAEKAM----PSYNTMGVAKASLEATVR 191 (280)
T ss_dssp HHHHTTTTCEEEEEECGGGTSCC----TTTHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCCeEEEEeccccccCC----CCchhhHHHHHHHHHHHH
Confidence 532 35799999998875432 233456777777665554
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=8.4e-14 Score=109.31 Aligned_cols=140 Identities=13% Similarity=0.037 Sum_probs=100.0
Q ss_pred ceEEEEcCCCh--hhHHHHHHHHHcCCcEEEEecCCCCCCc---c--cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGM--TGLCSLEAALKQGLEVCTLLRDPQRLPS---E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~--iG~~l~~~L~~~g~~v~~~~r~~~~~~~---~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+ ||+++++.|+++|++|++.+|++..... + ...++.++.+|++++++++++++.
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~--------- 102 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFET--------- 102 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHH---------
Confidence 57999999987 9999999999999999999998432111 1 113567888888888888777754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC-----------CcceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~-----------~~~~~~~~~~~ll~~~ 139 (189)
+.+.++++|++|+++|.... .+ ..++|+.++.++++++
T Consensus 103 ---------------------------~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 155 (293)
T 3grk_A 103 ---------------------------LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRA 155 (293)
T ss_dssp ---------------------------HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ---------------------------HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556789999999997641 11 1247888888888877
Q ss_pred HHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... ..++||++||..+.... +....|..+|...+.+.+
T Consensus 156 ~~~m~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaa~~~l~~ 195 (293)
T 3grk_A 156 EKLMADGGSILTLTYYGAEKVM----PNYNVMGVAKAALEASVK 195 (293)
T ss_dssp HHHTTTCEEEEEEECGGGTSBC----TTTTHHHHHHHHHHHHHH
T ss_pred HHhccCCCEEEEEeehhhccCC----CchHHHHHHHHHHHHHHH
Confidence 652 34699999998876432 223456777777766554
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=6.2e-14 Score=108.31 Aligned_cols=140 Identities=11% Similarity=0.063 Sum_probs=99.3
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+ |+||++++++|+++|++|++++|+....... ....+.++.+|++++++++++++.+
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------- 86 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASL-------- 86 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHH--------
Confidence 689999999 9999999999999999999999984322211 1134677888888888877777543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC----CC------------CcceehhhHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND----LS------------PTTVMSEGMKNIVTA 138 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~----~~------------~~~~~~~~~~~ll~~ 138 (189)
.+.+++.|++|+++|.... .. ..++|+.++.+++++
T Consensus 87 ----------------------------~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 138 (271)
T 3ek2_A 87 ----------------------------KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKA 138 (271)
T ss_dssp ----------------------------HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHH
T ss_pred ----------------------------HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHH
Confidence 3445678999999986542 10 123778888888888
Q ss_pred HHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+... ..+++|++||..+.... +....|..+|...+.+.+
T Consensus 139 ~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 179 (271)
T 3ek2_A 139 ALPMLSDDASLLTLSYLGAERAI----PNYNTMGLAKAALEASVR 179 (271)
T ss_dssp HGGGEEEEEEEEEEECGGGTSBC----TTTTHHHHHHHHHHHHHH
T ss_pred HHHHhccCceEEEEeccccccCC----CCccchhHHHHHHHHHHH
Confidence 8654 24689999998775432 233456677777665554
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-14 Score=108.91 Aligned_cols=135 Identities=14% Similarity=0.073 Sum_probs=93.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC--c--ccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP--S--EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~--~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+++||||+++||+++++.|.++|.+|.+.+|+..... . ....+...+.+|+++++++++.++.
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~------------ 77 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTD------------ 77 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTT------------
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHh------------
Confidence 57999999999999999999999999999999753211 0 1235677888888887765544321
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhH----HHHHHHHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGM----KNIVTAMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~----~~ll~~~~~~ 142 (189)
++.|++|+++|.....+.. ++|+.++ +.+++.|+++
T Consensus 78 -----------------------------g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~ 128 (247)
T 4hp8_A 78 -----------------------------AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAK 128 (247)
T ss_dssp -----------------------------TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 3579999999976544322 3666664 4455556555
Q ss_pred C-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 N-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .+++|.+||..+....+ ....|..+|..+..+.+
T Consensus 129 g~~G~IVnisS~~~~~g~~----~~~~Y~asKaav~~ltr 164 (247)
T 4hp8_A 129 GRSGKVVNIASLLSFQGGI----RVPSYTAAKHGVAGLTK 164 (247)
T ss_dssp TCCEEEEEECCGGGTSCCS----SCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEechhhCCCCC----CChHHHHHHHHHHHHHH
Confidence 4 57999999988765322 23356777777766555
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.1e-13 Score=114.75 Aligned_cols=149 Identities=13% Similarity=0.114 Sum_probs=95.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++++||||+|+||++++++|.++|+ +|++++|+....... +.+.+.++..
T Consensus 260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~---------------~~l~~~l~~~-------------- 310 (511)
T 2z5l_A 260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGA---------------AELAEELRGH-------------- 310 (511)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTH---------------HHHHHHHHTT--------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHH---------------HHHHHHHHhc--------------
Confidence 6899999999999999999999999 588889875432110 0111111110
Q ss_pred CCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC-CccE
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY-NVSV 146 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~-~~~~ 146 (189)
..++..+.+|+.|.+++.+.+. ++|++||++|....... ..+|+.++.++.+++... +.++
T Consensus 311 -----g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~ 385 (511)
T 2z5l_A 311 -----GCEVVHAACDVAERDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDA 385 (511)
T ss_dssp -----TCEEEEEECCSSCHHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCC
T ss_pred -----CCEEEEEEeCCCCHHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCE
Confidence 1134444444444444444443 37888888886543311 236888899999988776 7789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh---hcCCCCC
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK---DSGLNYI 188 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~---~~~~~~t 188 (189)
||++||..+....+ ....|...|...+.+.+ ..++.++
T Consensus 386 ~V~~SS~a~~~g~~----g~~~YaaaKa~ld~la~~~~~~gi~v~ 426 (511)
T 2z5l_A 386 FVLFSSVTGTWGNA----GQGAYAAANAALDALAERRRAAGLPAT 426 (511)
T ss_dssp EEEEEEGGGTTCCT----TBHHHHHHHHHHHHHHHHHHTTTCCCE
T ss_pred EEEEeCHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 99999987655322 23456667766665544 4466554
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.50 E-value=5.5e-14 Score=109.47 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=94.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+|+||++++++|+++|++|++++|+++....+ ...++.++.+|++++++++++++..
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~------------ 98 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA------------ 98 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH------------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH------------
Confidence 4799999999999999999999999999999987654432 2356788888888888887777532
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEe-eccCCCCC----------------CcceehhhHHHHHHHHH-
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVA-LGTRNDLS----------------PTTVMSEGMKNIVTAMK- 140 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~-~~~~~~~~----------------~~~~~~~~~~~ll~~~~- 140 (189)
+.+++.|++|++ +|...... ..++|+.++.++.+++.
T Consensus 99 -------------------------~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 153 (281)
T 3ppi_A 99 -------------------------NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAA 153 (281)
T ss_dssp -------------------------TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred -------------------------HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 122356777777 33221110 12356777666666553
Q ss_pred ---H------CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 ---E------YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ---~------~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ .+.++||++||..++... +....|..+|...+.+.+
T Consensus 154 ~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 199 (281)
T 3ppi_A 154 SIAAAEPRENGERGALVLTASIAGYEGQ----IGQTAYAAAKAGVIGLTI 199 (281)
T ss_dssp HHHTSCCCTTSCCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHhhcccccCCCeEEEEEecccccCCC----CCCcccHHHHHHHHHHHH
Confidence 3 345699999999876532 233456777776665544
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.49 E-value=8.5e-14 Score=107.29 Aligned_cols=140 Identities=13% Similarity=0.089 Sum_probs=97.3
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+| +||+++++.|+++|++|++.+|+++..+++ ...++.++++|++++++++++++.
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------- 79 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ------- 79 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH-------
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH-------
Confidence 5799999876 899999999999999999999987654322 234677888999999888887754
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCc-----------ceehhhHHHHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPT-----------TVMSEGMKNIVT 137 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~-----------~~~~~~~~~ll~ 137 (189)
+.+.+++.|++|+++|..... ... ++|..+...+..
T Consensus 80 -----------------------------~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 130 (256)
T 4fs3_A 80 -----------------------------IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAH 130 (256)
T ss_dssp -----------------------------HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred -----------------------------HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 356778999999999864321 111 134444444444
Q ss_pred HHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+... +.+++|++||..+.... +.+..|..+|..+..+.+
T Consensus 131 ~~~~~~~~~G~IVnisS~~~~~~~----~~~~~Y~asKaal~~ltr 172 (256)
T 4fs3_A 131 EAKKLMPEGGSIVATTYLGGEFAV----QNYNVMGVAKASLEANVK 172 (256)
T ss_dssp HHHTTCTTCEEEEEEECGGGTSCC----TTTHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCEEEEEeccccccCc----ccchhhHHHHHHHHHHHH
Confidence 44332 34699999998875422 233456677777665554
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-14 Score=109.74 Aligned_cols=138 Identities=12% Similarity=-0.027 Sum_probs=86.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEE-e--cCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTL-L--RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
||+++||||+|+||++++++|+++|++|+++ . |+++........ + ...|+.++++++++++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~-~--~~~~~~~~~~v~~~~~------------- 64 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESE-N--PGTIALAEQKPERLVD------------- 64 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-S--TTEEECCCCCGGGHHH-------------
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHH-h--CCCcccCHHHHHHHHH-------------
Confidence 6899999999999999999999999999999 6 875443321100 0 0112223333333222
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC---CCC-----------cceehhhHHHHHHH----H
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND---LSP-----------TTVMSEGMKNIVTA----M 139 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~---~~~-----------~~~~~~~~~~ll~~----~ 139 (189)
.+.+.++++|++|+++|.... .+. .++|+.++.++.++ +
T Consensus 65 -----------------------~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 121 (244)
T 1zmo_A 65 -----------------------ATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPL 121 (244)
T ss_dssp -----------------------HHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred -----------------------HHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 223344578999999986543 211 23677776555554 4
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|...+.+.+
T Consensus 122 ~~~~~g~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 159 (244)
T 1zmo_A 122 RAAGGASVIFITSSVGKKPL----AYNPLYGPARAATVALVE 159 (244)
T ss_dssp HHTTCEEEEEECCGGGTSCC----TTCTTHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEECChhhCCCC----CCchHHHHHHHHHHHHHH
Confidence 56667899999998876432 223457777777766554
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.6e-13 Score=113.60 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=102.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCc---c------cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPS---E------YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~---~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
++++||||+|+||++++++|+++|+ +|+++.|+...... + .+.++.++.+|++|+++++++++....
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~--- 316 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE--- 316 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT---
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH---
Confidence 6899999999999999999999998 78888887433221 1 234677888888888888777765411
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccC-CCCC-----------CcceehhhHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTR-NDLS-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~-~~~~-----------~~~~~~~~~~~ll~~~ 139 (189)
. .+.|++||++|.. .... ...+|+.++.++.+.+
T Consensus 317 ---------------------------------~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~ 362 (496)
T 3mje_A 317 ---------------------------------D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELT 362 (496)
T ss_dssp ---------------------------------T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred ---------------------------------h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 2578999999875 3221 1247899999999999
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh---hcCCCC
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK---DSGLNY 187 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~---~~~~~~ 187 (189)
...+.++||++||..+....+ ....|...|...+.+.+ ..++.+
T Consensus 363 ~~~~~~~iV~~SS~a~~~g~~----g~~~YaAaKa~ldala~~~~~~Gi~v 409 (496)
T 3mje_A 363 ADLDLDAFVLFSSGAAVWGSG----GQPGYAAANAYLDALAEHRRSLGLTA 409 (496)
T ss_dssp TTSCCSEEEEEEEHHHHTTCT----TCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hccCCCEEEEEeChHhcCCCC----CcHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 988889999999988765432 23346666655544433 445543
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.47 E-value=2.4e-13 Score=105.31 Aligned_cols=139 Identities=16% Similarity=0.104 Sum_probs=97.7
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc---ccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS---EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++|||| +|+||++++++|+++|++|++++|+++.. .. ....++.++.+|++++++++++++..
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--------- 78 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRV--------- 78 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHH---------
Confidence 47999999 99999999999999999999999986432 21 12345678888888888887777532
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhc---CCCEEEEeeccCCC-----CCC-----------cceehhhHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE---GKDGVVVALGTRND-----LSP-----------TTVMSEGMKNIV 136 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~vv~~~~~~~~-----~~~-----------~~~~~~~~~~ll 136 (189)
.+.++ ++|++|+++|.... .+. .++|+.++.++.
T Consensus 79 ---------------------------~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 131 (269)
T 2h7i_A 79 ---------------------------TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMA 131 (269)
T ss_dssp ---------------------------HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ---------------------------HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHH
Confidence 34455 78999999886541 111 237788888888
Q ss_pred HHHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 TAMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 ~~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++... ..++||++||..... .+.+..|..+|...+.+.+
T Consensus 132 ~~~~~~~~~~g~iv~iss~~~~~-----~~~~~~Y~asKaa~~~l~~ 173 (269)
T 2h7i_A 132 KALLPIMNPGGSIVGMDFDPSRA-----MPAYNWMTVAKSALESVNR 173 (269)
T ss_dssp HHHGGGEEEEEEEEEEECCCSSC-----CTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCeEEEEcCccccc-----cCchHHHHHHHHHHHHHHH
Confidence 887653 236999999876421 1234456677777665554
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-13 Score=105.70 Aligned_cols=140 Identities=13% Similarity=0.011 Sum_probs=96.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|+++.+ +.+..... ...++.++.+|++++++++..++..
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-------- 79 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL-------- 79 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH--------
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH--------
Confidence 58999999999999999999999999988644 43332211 1245677788888887777766543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHh------cCCCEEEEeeccCCCCCC-----------cceehhhHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI------EGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVT 137 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~ 137 (189)
.+.+ .++|++|+++|....... .++|+.++.++++
T Consensus 80 ----------------------------~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 131 (255)
T 3icc_A 80 ----------------------------DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQ 131 (255)
T ss_dssp ----------------------------HHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ----------------------------HHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHH
Confidence 1112 238999999986543321 2378888888888
Q ss_pred HHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++... +.+++|++||..+.... +....|..+|...+.+.+
T Consensus 132 ~~~~~~~~~~~iv~isS~~~~~~~----~~~~~Y~asKaa~~~~~~ 173 (255)
T 3icc_A 132 QALSRLRDNSRIINISSAATRISL----PDFIAYSMTKGAINTMTF 173 (255)
T ss_dssp HHTTTEEEEEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCEEEEeCChhhccCC----CCcchhHHhHHHHHHHHH
Confidence 88664 45699999998875432 233456777777665544
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.7e-13 Score=102.18 Aligned_cols=122 Identities=12% Similarity=-0.017 Sum_probs=90.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+|+||++++++|+++|++|++.+|+++ +|++++++++++++.
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~---------------- 56 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFET---------------- 56 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHH----------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHH----------------
Confidence 47999999999999999999999999999999754 788888887766642
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-CC-----------cceehhhHHHHHHHHHHC--CccEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-SP-----------TTVMSEGMKNIVTAMKEY--NVSVV 147 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~~-----------~~~~~~~~~~ll~~~~~~--~~~~~ 147 (189)
+++.|++|+++|..... +. .++|+.++.++++++... ..+++
T Consensus 57 ------------------------~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~i 112 (223)
T 3uce_A 57 ------------------------IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSI 112 (223)
T ss_dssp ------------------------HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred ------------------------hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEE
Confidence 24578888888865211 11 236888888888888654 23589
Q ss_pred EEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 148 SVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 148 i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
|++||..+.... +....|..+|...+.+.+
T Consensus 113 v~~sS~~~~~~~----~~~~~Y~asK~a~~~~~~ 142 (223)
T 3uce_A 113 TLTSGMLSRKVV----ANTYVKAAINAAIEATTK 142 (223)
T ss_dssp EEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred EEecchhhccCC----CCchHHHHHHHHHHHHHH
Confidence 999998775432 233456777777766554
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.46 E-value=5.5e-14 Score=107.39 Aligned_cols=137 Identities=18% Similarity=0.112 Sum_probs=82.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+|+||++++++|++ |++|++++|+++....+. ..++.++.+|++++++ .+.+..
T Consensus 6 k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~--------------- 68 (245)
T 3e9n_A 6 KIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVL-EEGGVD--------------- 68 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHH-TSSSCG---------------
T ss_pred CEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHH-HHHHHH---------------
Confidence 5799999999999999999987 999999999865544321 2457788888877654 111111
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHHHHHCCcc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTAMKEYNVS 145 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~~~~~~~~ 145 (189)
..+.++++|++|+++|....... .++|+.++.++ ++.+++.+ +
T Consensus 69 ---------------------~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g 126 (245)
T 3e9n_A 69 ---------------------KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-G 126 (245)
T ss_dssp ---------------------GGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred ---------------------HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-C
Confidence 11224568999999986543321 23677775444 44445555 7
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++|++||..++... +....|..+|...+.+.+
T Consensus 127 ~iv~isS~~~~~~~----~~~~~Y~asK~a~~~~~~ 158 (245)
T 3e9n_A 127 CVIYINSGAGNGPH----PGNTIYAASKHALRGLAD 158 (245)
T ss_dssp EEEEEC--------------CHHHHHHHHHHHHHHH
T ss_pred eEEEEcCcccccCC----CCchHHHHHHHHHHHHHH
Confidence 99999998876532 223457777777766554
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-13 Score=112.09 Aligned_cols=140 Identities=16% Similarity=0.001 Sum_probs=100.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC--Ccc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL--PSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~--~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++++||||+|+||++++++|+++|++|++++|++... ... ...+..++.+|++++++++++++..
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~------------ 281 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHV------------ 281 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHH------------
T ss_pred CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHH------------
Confidence 5799999999999999999999999999998864211 111 1234568888998888888777543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcC-CCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC----
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEG-KDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY---- 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~---- 142 (189)
.+.+++ .|++||++|....... .++|+.++.++.+++...
T Consensus 282 ------------------------~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~ 337 (454)
T 3u0b_A 282 ------------------------TEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG 337 (454)
T ss_dssp ------------------------HHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC
T ss_pred ------------------------HHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 344444 8999999997654321 247888899998888765
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 338 ~~g~iV~iSS~a~~~g~~----g~~~YaasKaal~~l~~ 372 (454)
T 3u0b_A 338 EGGRVIGLSSMAGIAGNR----GQTNYATTKAGMIGLAE 372 (454)
T ss_dssp TTCEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeChHhCCCCC----CCHHHHHHHHHHHHHHH
Confidence 567999999988765422 23356667766554443
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.4e-13 Score=107.11 Aligned_cols=140 Identities=17% Similarity=0.063 Sum_probs=88.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC---------CCCccc---CCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ---------RLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~---------~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|+++||||+|+||+++++.|+++|++|++.+|... ...... ........+|+.+.+++++.++.
T Consensus 10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~---- 85 (319)
T 1gz6_A 10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT---- 85 (319)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHH----
Confidence 58999999999999999999999999999866422 111000 00001123455555544443322
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA 138 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~ 138 (189)
+.+.++++|++||++|.....+. .++|+.++.++.++
T Consensus 86 --------------------------------~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 133 (319)
T 1gz6_A 86 --------------------------------ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRA 133 (319)
T ss_dssp --------------------------------HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 23445689999999996543211 23677775555554
Q ss_pred ----HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 ----MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ----~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 134 ~~~~m~~~~~grIV~vsS~~~~~~~~----~~~~Y~aSK~a~~~~~~ 176 (319)
T 1gz6_A 134 AWDHMKKQNYGRIIMTASASGIYGNF----GQANYSAAKLGLLGLAN 176 (319)
T ss_dssp HHHHHHHHTCEEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEECChhhccCCC----CCHHHHHHHHHHHHHHH
Confidence 4566678999999987654322 23457777777765554
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.2e-12 Score=110.44 Aligned_cols=139 Identities=9% Similarity=0.035 Sum_probs=93.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEE-ecCCCC-------------CCcc------cCCceeEEeccccChhHHH
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTL-LRDPQR-------------LPSE------YHSKVEIIQGDVLKLADVK 60 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~-~r~~~~-------------~~~~------~~~~~~~~~~d~~~~~~~~ 60 (189)
++++||||+|+||.+++++|.++|.+ |+++ +|++.. ..++ .+.++.++.+|++|+++++
T Consensus 252 ~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~ 331 (525)
T 3qp9_A 252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAA 331 (525)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHH
Confidence 57999999999999999999999997 5555 777432 1111 1234566666666666666
Q ss_pred HhhhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceeh
Q psy3626 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMS 129 (189)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~ 129 (189)
++++... ..++.|++||++|....... ..+|+
T Consensus 332 ~~~~~i~-------------------------------------~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv 374 (525)
T 3qp9_A 332 RLLAGVS-------------------------------------DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKA 374 (525)
T ss_dssp HHHHTSC-------------------------------------TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHH-------------------------------------hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHH
Confidence 6665431 12357899999997654321 24788
Q ss_pred hhHHHHHHHHHHCC-----ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 130 EGMKNIVTAMKEYN-----VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 130 ~~~~~ll~~~~~~~-----~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++.++.+++.... .++||++||..+....+ ....|..+|..++.+.+
T Consensus 375 ~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~----g~~~YaaaKa~l~~lA~ 427 (525)
T 3qp9_A 375 TAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA----GQGAYAAGTAFLDALAG 427 (525)
T ss_dssp HHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT----TCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC----CCHHHHHHHHHHHHHHH
Confidence 89999999887654 78999999998765422 23346666666655443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-12 Score=87.89 Aligned_cols=94 Identities=22% Similarity=0.112 Sum_probs=67.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|++|+|+|+ |++|+.+++.|.+.| ++|++++|++++.......++.++.+
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~---------------------------- 55 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQV---------------------------- 55 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEEC----------------------------
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEe----------------------------
Confidence 568999999 999999999999999 99999999865544332233344444
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
|+.+.+.+.+.+.++|++|++++. ....++++.+.+.+++++.+
T Consensus 56 ---------------d~~~~~~~~~~~~~~d~vi~~~~~-----------~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 56 ---------------DAKDEAGLAKALGGFDAVISAAPF-----------FLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp ---------------CTTCHHHHHHHTTTCSEEEECSCG-----------GGHHHHHHHHHHTTCEEECC
T ss_pred ---------------cCCCHHHHHHHHcCCCEEEECCCc-----------hhhHHHHHHHHHhCCCEEEe
Confidence 444555555556667888888743 23578899999998766553
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-12 Score=111.32 Aligned_cols=140 Identities=18% Similarity=0.026 Sum_probs=83.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC---------CCCCccc---CCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP---------QRLPSEY---HSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~---------~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|+++||||+|+||++++++|+++|++|++++|.. +...... ........+|+++.++++++++.+
T Consensus 20 k~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~--- 96 (613)
T 3oml_A 20 RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA--- 96 (613)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC-----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH---
Confidence 5799999999999999999999999999998832 2211110 001112235666666555555433
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHH
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTA 138 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~ 138 (189)
.+.++++|++|+++|....... .++|+.++.++.++
T Consensus 97 ---------------------------------~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~ 143 (613)
T 3oml_A 97 ---------------------------------IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQA 143 (613)
T ss_dssp -----------------------------------------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2334578999999997644321 23677776665554
Q ss_pred H----HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 M----KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~----~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+ ++.+.++||++||..+....+ ....|..+|...+.+.+
T Consensus 144 ~~p~m~~~~~g~IV~isS~a~~~~~~----~~~~Y~asKaal~~lt~ 186 (613)
T 3oml_A 144 AFPYMKKQNYGRIIMTSSNSGIYGNF----GQVNYTAAKMGLIGLAN 186 (613)
T ss_dssp HHHHHHTTTCEEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEECCHHHcCCCC----CChHHHHHHHHHHHHHH
Confidence 4 667778999999988765322 23457777777665554
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=5.3e-11 Score=93.24 Aligned_cols=141 Identities=11% Similarity=-0.001 Sum_probs=87.1
Q ss_pred ceEEEEcCC--ChhhHHHHHHHHHcCCcEEEEecC-----------CCCCCccc---CCc----eeEEeccc--------
Q psy3626 2 KKIAIFGAT--GMTGLCSLEAALKQGLEVCTLLRD-----------PQRLPSEY---HSK----VEIIQGDV-------- 53 (189)
Q Consensus 2 ~~i~ItGat--G~iG~~l~~~L~~~g~~v~~~~r~-----------~~~~~~~~---~~~----~~~~~~d~-------- 53 (189)
|+++||||+ |+||++++++|+++|++|++++|+ .+.++... ... ...+.+|+
T Consensus 9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 88 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV 88 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhh
Confidence 579999999 999999999999999999998754 22222210 000 12233332
Q ss_pred ----cC--------hhHHHHhhhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-
Q psy3626 54 ----LK--------LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN- 120 (189)
Q Consensus 54 ----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~- 120 (189)
++ ++++++++ +.+.+.+++.|++||++|...
T Consensus 89 ~~Dv~~~~~~~~~~~~~v~~~~------------------------------------~~~~~~~g~iD~lvnnAg~~~~ 132 (297)
T 1d7o_A 89 PEDVKANKRYAGSSNWTVQEAA------------------------------------ECVRQDFGSIDILVHSLANGPE 132 (297)
T ss_dssp CHHHHTSHHHHHCCCCSHHHHH------------------------------------HHHHHHHSCEEEEEECCCCCTT
T ss_pred hhhhhccccccccCHHHHHHHH------------------------------------HHHHHHcCCCCEEEECCccCcc
Confidence 11 22233222 223445668999999998532
Q ss_pred -CCC-----------CcceehhhHHHHHHHHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 121 -DLS-----------PTTVMSEGMKNIVTAMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 121 -~~~-----------~~~~~~~~~~~ll~~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+ ..++|+.++.++++++... ..+++|++||..+.... |.....|..+|...+.+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~---~~~~~~Y~asKaa~~~~~~ 204 (297)
T 1d7o_A 133 VSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII---PGYGGGMSSAKAALESDTR 204 (297)
T ss_dssp TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---TTCTTTHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCC---CCcchHHHHHHHHHHHHHH
Confidence 111 1237888888888888653 23699999998765432 2211357777777765554
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-11 Score=98.82 Aligned_cols=140 Identities=14% Similarity=0.031 Sum_probs=84.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|||+||||+||+|++++..|+++|+ +|+++++.+.. ... .....-+...
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~-~~~---------------~g~~~dl~~~-------- 60 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAM-KAL---------------EGVVMELEDC-------- 60 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGH-HHH---------------HHHHHHHHTT--------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCch-hhc---------------cchhhhhhcc--------
Confidence 5899999999999999999999886 78887765310 000 0000001000
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-----CcceehhhHHHHHHHHHHCC-cc-EE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-----PTTVMSEGMKNIVTAMKEYN-VS-VV 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-----~~~~~~~~~~~ll~~~~~~~-~~-~~ 147 (189)
.+..+ +|+.+..++.+++.++|+|||++|...... ..+.|+.+++++++++++.+ .+ ++
T Consensus 61 -------------~~~~~-~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~v 126 (327)
T 1y7t_A 61 -------------AFPLL-AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKV 126 (327)
T ss_dssp -------------TCTTE-EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEE
T ss_pred -------------ccccc-CCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEE
Confidence 00011 233333445566778888888888654321 13479999999999999975 65 77
Q ss_pred EEeccceee-----cCCC-CCCCCCccchhhHHHHHHHh
Q psy3626 148 SVCLSAFLF-----YEPS-KVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 148 i~iSS~~~~-----~~~~-~~p~~~~~~~~~~~~~~~~l 180 (189)
+++|+.... .... .. ++...|...+...+++.
T Consensus 127 vv~snp~~~~~~~~~~~~~~~-~p~~~yg~tkl~~er~~ 164 (327)
T 1y7t_A 127 LVVGNPANTNALIAYKNAPGL-NPRNFTAMTRLDHNRAK 164 (327)
T ss_dssp EECSSSHHHHHHHHHHTCTTS-CGGGEEECCHHHHHHHH
T ss_pred EEeCCchhhhHHHHHHHcCCC-ChhheeccchHHHHHHH
Confidence 877765311 1111 22 23345666666666544
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1e-10 Score=92.52 Aligned_cols=141 Identities=11% Similarity=0.007 Sum_probs=86.3
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecCC-----------CCCCc---ccCC----ceeEEeccc--------
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRDP-----------QRLPS---EYHS----KVEIIQGDV-------- 53 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~~-----------~~~~~---~~~~----~~~~~~~d~-------- 53 (189)
|+++|||| +|+||++++++|+++|++|++++|++ ..+.. +... ...++.+|+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV 89 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence 57999999 89999999999999999999998642 11111 0000 023333332
Q ss_pred ----cC--------hhHHHHhhhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-
Q psy3626 54 ----LK--------LADVKKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN- 120 (189)
Q Consensus 54 ----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~- 120 (189)
++ ++++++++ +.+.+.+++.|++|+++|...
T Consensus 90 ~~Dv~~~~~~~~~d~~~v~~~~------------------------------------~~~~~~~g~iD~lVnnAg~~~~ 133 (315)
T 2o2s_A 90 PQDIKDNKRYAGVDGYTIKEVA------------------------------------VKVKQDLGNIDILVHSLANGPE 133 (315)
T ss_dssp CHHHHTCGGGSSCCCCSHHHHH------------------------------------HHHHHHHCSEEEEEECCCCCTT
T ss_pred hhhhhcccccccCCHHHHHHHH------------------------------------HHHHHhcCCCCEEEECCccCCc
Confidence 21 22222222 223445678999999998542
Q ss_pred -CCCC-----------cceehhhHHHHHHHHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 121 -DLSP-----------TTVMSEGMKNIVTAMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 121 -~~~~-----------~~~~~~~~~~ll~~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
..+. .++|+.++.++.+++... ..++||++||..+.... |.....|..+|...+.+.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---~~~~~~Y~asKaal~~l~~ 205 (315)
T 2o2s_A 134 VTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV---PGYGGGMSSAKAALESDTR 205 (315)
T ss_dssp TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCC---TTCCTTHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccC---CCccHHHHHHHHHHHHHHH
Confidence 1111 236788888888877543 12699999998765422 2221357777777665554
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.16 E-value=2.6e-10 Score=90.71 Aligned_cols=152 Identities=9% Similarity=-0.022 Sum_probs=92.5
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCC---------CCCC---cc------cCCceeEEeccccCh--hHH
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDP---------QRLP---SE------YHSKVEIIQGDVLKL--ADV 59 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~---------~~~~---~~------~~~~~~~~~~d~~~~--~~~ 59 (189)
|+++|||+++ +||++++++|+++|++|++.+|++ +... .. ....+.++.+|+++. +.+
T Consensus 3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 82 (329)
T 3lt0_A 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI 82 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence 6899999875 999999999999999999776553 1111 10 112367888888876 522
Q ss_pred HHhhhcCcceeeecccCCCCCCCccccCceeEEeccccCH-------HHHHHHhcCCCEEEEeeccCC--CCCC------
Q psy3626 60 KKAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKL-------ADVKKAIEGKDGVVVALGTRN--DLSP------ 124 (189)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~vv~~~~~~~--~~~~------ 124 (189)
...... .+.+|+.++ +.+.+.+++.|++|+++|... ..+.
T Consensus 83 ~~~~~~-------------------------~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~ 137 (329)
T 3lt0_A 83 DEETKN-------------------------NKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRK 137 (329)
T ss_dssp CHHHHT-------------------------SHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHH
T ss_pred hhhhcc-------------------------cccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHH
Confidence 111110 011222222 233455668999999998532 1111
Q ss_pred -----cceehhhHHHHHHHHHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 125 -----TTVMSEGMKNIVTAMKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 125 -----~~~~~~~~~~ll~~~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++|+.++..+.+++... .-++||++||..+.... |.....|..+|.....+.+
T Consensus 138 ~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~---~~~~~~Y~asKaal~~~~~ 198 (329)
T 3lt0_A 138 GYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV---PGYGGGMSSAKAALESDTR 198 (329)
T ss_dssp HHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC---TTCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCC---CcchHHHHHHHHHHHHHHH
Confidence 237777777777766542 12699999998875432 2111257777777665544
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.3e-10 Score=94.32 Aligned_cols=64 Identities=17% Similarity=0.142 Sum_probs=50.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHH-cCCcEEEEecCCCCCCc---------------c---cCCceeEEeccccChhHHHHh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK-QGLEVCTLLRDPQRLPS---------------E---YHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~---------------~---~~~~~~~~~~d~~~~~~~~~~ 62 (189)
|+++||||+++||+++++.|++ +|.+|++++|+.+.... . .+..+..+.+|++++++++++
T Consensus 48 KvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~ 127 (405)
T 3zu3_A 48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLT 127 (405)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 6799999999999999999999 99999999887654321 0 123466788888888888777
Q ss_pred hhc
Q psy3626 63 IEG 65 (189)
Q Consensus 63 ~~~ 65 (189)
++.
T Consensus 128 v~~ 130 (405)
T 3zu3_A 128 IDA 130 (405)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.4e-11 Score=100.76 Aligned_cols=139 Identities=16% Similarity=0.035 Sum_probs=86.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC---------CCCcc----cCCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ---------RLPSE----YHSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~---------~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
|+++||||+++||+++++.|+++|++|++.+|+.. .++.. ...... ..+|+.+.+++++++
T Consensus 9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v----- 82 (604)
T 2et6_A 9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIV----- 82 (604)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHH-----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHH-----
Confidence 57999999999999999999999999999887641 11100 000001 112333333322222
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----H
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----K 133 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~ 133 (189)
+.+.+.+++.|++|+++|.....+. .++|+.++ +
T Consensus 83 -------------------------------~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~ 131 (604)
T 2et6_A 83 -------------------------------ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTK 131 (604)
T ss_dssp -------------------------------HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred -------------------------------HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 2344567889999999997543221 23666664 5
Q ss_pred HHHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 134 NIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 134 ~ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+++.+.++||++||..+....+ ....|..+|..+..+.+
T Consensus 132 a~~p~m~~~~~G~IVnisS~ag~~~~~----~~~~Y~asKaal~~lt~ 175 (604)
T 2et6_A 132 AAWPYFQKQKYGRIVNTSSPAGLYGNF----GQANYASAKSALLGFAE 175 (604)
T ss_dssp HHHHHHHHHTCEEEEEECCHHHHHCCT----TBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCHHHcCCCC----CchHHHHHHHHHHHHHH
Confidence 556666666668999999988765322 23346667776665544
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.13 E-value=9.9e-11 Score=95.62 Aligned_cols=81 Identities=26% Similarity=0.246 Sum_probs=64.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHH-cCCcEEEEecCCCCCCcc------------------cCCceeEEeccccChhHHHHh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK-QGLEVCTLLRDPQRLPSE------------------YHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~------------------~~~~~~~~~~d~~~~~~~~~~ 62 (189)
|+++||||+++||+++++.|.+ +|.+|++++|+.+..... .+..+..+.+|++++++++++
T Consensus 62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~ 141 (422)
T 3s8m_A 62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQV 141 (422)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 6799999999999999999999 999999999986654321 123466788888888887777
Q ss_pred hhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeecc
Q psy3626 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGT 118 (189)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~ 118 (189)
++. +.+.+ ++.|++|+++|.
T Consensus 142 v~~------------------------------------i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 142 IEL------------------------------------IKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp HHH------------------------------------HHHHSCSCEEEEEECCCC
T ss_pred HHH------------------------------------HHHHcCCCCCEEEEcCcc
Confidence 753 35566 788999998875
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.7e-10 Score=90.16 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=30.4
Q ss_pred ceEEEEcC--CChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGA--TGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGa--tG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
|+++|||| +|+||+++++.|+++|++|++++|+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP 44 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence 46999999 8999999999999999999999864
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.5e-10 Score=105.80 Aligned_cols=136 Identities=15% Similarity=0.041 Sum_probs=93.6
Q ss_pred ceEEEEcCCCh-hhHHHHHHHHHcCCcEEEE-ecCCCCCCcc----------cCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGM-TGLCSLEAALKQGLEVCTL-LRDPQRLPSE----------YHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~-iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|+++||||+|+ ||+++++.|+++|++|+++ .|+++..... .+.++.++.+|++++++++++++.+
T Consensus 477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I--- 553 (1688)
T 2pff_A 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI--- 553 (1688)
T ss_dssp CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH---
T ss_pred CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH---
Confidence 57999999998 9999999999999999988 5665544321 0235778888988888887777542
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHH-----hc-CCCEEEEeeccCCCC-C----C---------cceeh
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-----IE-GKDGVVVALGTRNDL-S----P---------TTVMS 129 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~d~vv~~~~~~~~~-~----~---------~~~~~ 129 (189)
.+. ++ ++|++|+++|..... + . .++|+
T Consensus 554 ---------------------------------~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL 600 (1688)
T 2pff_A 554 ---------------------------------YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNI 600 (1688)
T ss_dssp ---------------------------------HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHH
T ss_pred ---------------------------------HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHH
Confidence 122 23 578999998864322 1 1 23677
Q ss_pred hhHHHHHHHHHH------CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 130 EGMKNIVTAMKE------YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 130 ~~~~~ll~~~~~------~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
.++.+++++++. .+.++||++||..+... ....|..+|...+.+
T Consensus 601 ~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G------g~saYaASKAAL~aL 650 (1688)
T 2pff_A 601 LRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG------GDGMYSESKLSLETL 650 (1688)
T ss_dssp HHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS------CBTTHHHHHHHHTHH
T ss_pred HHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC------CchHHHHHHHHHHHH
Confidence 777777776622 23469999999766432 233567777776665
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.09 E-value=4.1e-10 Score=96.47 Aligned_cols=135 Identities=19% Similarity=0.003 Sum_probs=86.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccc-cChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDV-LKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||+++++.|+++|++|++.+|+. .+.. ...++..+.+|+ .+. ++++
T Consensus 323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~---~~~~----------- 386 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDS---EAII----------- 386 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHH---HHHH-----------
T ss_pred CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHH---HHHH-----------
Confidence 5799999999999999999999999999987632 1110 112233444555 222 1111
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhH----HHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGM----KNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~----~~ll~~~ 139 (189)
+.+.+.+++.|++|+++|.....+. .++|+.+. +.+++.+
T Consensus 387 -------------------------~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m 441 (604)
T 2et6_A 387 -------------------------KNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYF 441 (604)
T ss_dssp -------------------------HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred -------------------------HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2334567789999999997543221 23666664 4556666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.++||++||..+.... +....|..+|..+..+.+
T Consensus 442 ~~~~~G~IVnisS~ag~~~~----~~~~~Y~asKaal~~lt~ 479 (604)
T 2et6_A 442 VEKQFGRIINITSTSGIYGN----FGQANYSSSKAGILGLSK 479 (604)
T ss_dssp HHTTCEEEEEECCHHHHSCC----TTBHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEECChhhccCC----CCChhHHHHHHHHHHHHH
Confidence 67666899999998775432 123356667776655444
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.08 E-value=4.4e-10 Score=99.07 Aligned_cols=118 Identities=17% Similarity=0.202 Sum_probs=88.5
Q ss_pred ceEEEEcCCChhhHHHHHHHH-HcCC-cEEEEecCCCCCCc---c------cCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAAL-KQGL-EVCTLLRDPQRLPS---E------YHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~-~~g~-~v~~~~r~~~~~~~---~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
++++||||+|++|+.+++.|. ++|. +|++++|+....+. + .+.++.++.+|++++++++++++.+..
T Consensus 531 ~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~-- 608 (795)
T 3slk_A 531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD-- 608 (795)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT--
T ss_pred cceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH--
Confidence 579999999999999999999 7898 58899998433321 1 235678888999999988888876521
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAM 139 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~ 139 (189)
.. +.|++||++|....... .++|+.|+.++.+++
T Consensus 609 ----------------------------------~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~ 653 (795)
T 3slk_A 609 ----------------------------------EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI 653 (795)
T ss_dssp ----------------------------------TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS
T ss_pred ----------------------------------hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 46899999987654322 247888999988887
Q ss_pred HHCCccEEEEeccceeecC
Q psy3626 140 KEYNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~ 158 (189)
.. .. +||++||..+...
T Consensus 654 ~~-~l-~iV~~SS~ag~~g 670 (795)
T 3slk_A 654 DP-DV-ALVLFSSVSGVLG 670 (795)
T ss_dssp CT-TS-EEEEEEETHHHHT
T ss_pred hh-CC-EEEEEccHHhcCC
Confidence 32 34 8999999887654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.4e-10 Score=105.86 Aligned_cols=136 Identities=15% Similarity=0.036 Sum_probs=93.3
Q ss_pred ceEEEEcCCCh-hhHHHHHHHHHcCCcEEEE-ecCCCCCCcc----------cCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGM-TGLCSLEAALKQGLEVCTL-LRDPQRLPSE----------YHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~-iG~~l~~~L~~~g~~v~~~-~r~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
++++||||+++ ||+++++.|+++|++|+++ .|+++..... .+.++.++.+|++++++++++++.+
T Consensus 676 KvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i--- 752 (1887)
T 2uv8_A 676 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI--- 752 (1887)
T ss_dssp CEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH---
Confidence 57999999998 9999999999999999998 4554433211 1345677888888888877776532
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHH-----hc-CCCEEEEeeccCCCC-CC-------------cceeh
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-----IE-GKDGVVVALGTRNDL-SP-------------TTVMS 129 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~d~vv~~~~~~~~~-~~-------------~~~~~ 129 (189)
.+. ++ +.|++|+++|..... +. ..+|+
T Consensus 753 ---------------------------------~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv 799 (1887)
T 2uv8_A 753 ---------------------------------YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNI 799 (1887)
T ss_dssp ---------------------------------HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHH
T ss_pred ---------------------------------HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHH
Confidence 122 23 589999999965432 11 23677
Q ss_pred hhHHHHHHHHHHC------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 130 EGMKNIVTAMKEY------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 130 ~~~~~ll~~~~~~------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
.++..+.+.++.. +.++||++||..+... ....|..+|...+.+
T Consensus 800 ~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g------g~~aYaASKAAL~~L 849 (1887)
T 2uv8_A 800 LRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG------GDGMYSESKLSLETL 849 (1887)
T ss_dssp HHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS------CBTTHHHHHHHGGGH
T ss_pred HHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC------CCchHHHHHHHHHHH
Confidence 7777777776422 2369999999876542 233577777766655
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=75.55 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=66.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|++++|+|+ |.+|+.+++.|.+.|++|++++|+++............+.+|.++++.+.++
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~------------------ 66 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSL------------------ 66 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTT------------------
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhc------------------
Confidence 457999997 9999999999999999999999876544333222334455555554433322
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
.++++|+++.+++.. ......+...+++.+.++++..++...
T Consensus 67 ------------------------~~~~~d~vi~~~~~~---------~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 67 ------------------------GIRNFEYVIVAIGAN---------IQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp ------------------------TGGGCSEEEECCCSC---------HHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred ------------------------CCCCCCEEEECCCCc---------hHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 144567777776542 122334666777777777776655433
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=7.9e-10 Score=107.04 Aligned_cols=139 Identities=15% Similarity=0.048 Sum_probs=98.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCCCCCCc-------c--cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDPQRLPS-------E--YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~-------~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
++++||||+|+||+++++.|+++|.+ |++++|+...... + .+.++.++.+|++++++++++++.+
T Consensus 1885 k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~----- 1959 (2512)
T 2vz8_A 1885 KSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEA----- 1959 (2512)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHH-----
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHH-----
Confidence 57999999999999999999999997 7888888655421 1 1345778888999888888877543
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----------CCcceehhhHHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----------SPTTVMSEGMKNIVTAMK 140 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----------~~~~~~~~~~~~ll~~~~ 140 (189)
. .+++.|++||++|..... ...++|+.|+.++.+++.
T Consensus 1960 -------------------------------~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~ 2007 (2512)
T 2vz8_A 1960 -------------------------------T-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTR 2007 (2512)
T ss_dssp -------------------------------H-HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHH
T ss_pred -------------------------------H-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 246789999999864321 224588999998877765
Q ss_pred HC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.. ..++||++||..+....+ ....|..+|..+..+.+
T Consensus 2008 ~~~~~~g~iV~iSS~ag~~g~~----g~~~Y~aaKaal~~l~~ 2046 (2512)
T 2vz8_A 2008 EACPELDYFVIFSSVSCGRGNA----GQANYGFANSAMERICE 2046 (2512)
T ss_dssp HHCTTCCEEEEECCHHHHTTCT----TCHHHHHHHHHHHHHHH
T ss_pred HhcccCCEEEEecchhhcCCCC----CcHHHHHHHHHHHHHHH
Confidence 42 347999999988765322 22346666666665554
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.00 E-value=7.2e-10 Score=77.37 Aligned_cols=61 Identities=8% Similarity=0.098 Sum_probs=48.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 62 (189)
|++++|+|+ |.+|+.+++.|.++|++|++++++++........+..++.+|.++++.++++
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~ 66 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSL 66 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhC
Confidence 568999997 9999999999999999999999987665544334566777777777665543
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=3.3e-09 Score=86.91 Aligned_cols=64 Identities=17% Similarity=0.046 Sum_probs=48.7
Q ss_pred ceEEEEcCCChhhHH--HHHHHHHcCCcEEEEecCCCCCCc------------------ccCCceeEEeccccChhHHHH
Q psy3626 2 KKIAIFGATGMTGLC--SLEAALKQGLEVCTLLRDPQRLPS------------------EYHSKVEIIQGDVLKLADVKK 61 (189)
Q Consensus 2 ~~i~ItGatG~iG~~--l~~~L~~~g~~v~~~~r~~~~~~~------------------~~~~~~~~~~~d~~~~~~~~~ 61 (189)
|+++||||+++||++ ++..|.++|++|++++|+...... ..+..+..+.+|+++++++++
T Consensus 61 K~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~ 140 (418)
T 4eue_A 61 KKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDK 140 (418)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHH
Confidence 689999999999999 999999999999999997654321 012346677778887777776
Q ss_pred hhhc
Q psy3626 62 AIEG 65 (189)
Q Consensus 62 ~~~~ 65 (189)
+++.
T Consensus 141 ~v~~ 144 (418)
T 4eue_A 141 VIKY 144 (418)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6643
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=7.5e-10 Score=103.44 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=91.7
Q ss_pred ceEEEEcCCCh-hhHHHHHHHHHcCCcEEEEe-cCCCCCCc----c------cCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGM-TGLCSLEAALKQGLEVCTLL-RDPQRLPS----E------YHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~-iG~~l~~~L~~~g~~v~~~~-r~~~~~~~----~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
++++||||+|+ ||+++++.|+++|++|++++ |++..... + .+.++.++.+|++++++++++++.+
T Consensus 653 KvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i--- 729 (1878)
T 2uv9_A 653 KHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI--- 729 (1878)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH---
Confidence 57999999999 99999999999999999985 44433211 0 1345677888888888877776532
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHH---hc-CCCEEEEeeccCCCC-CC-------------cceehhh
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA---IE-GKDGVVVALGTRNDL-SP-------------TTVMSEG 131 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~d~vv~~~~~~~~~-~~-------------~~~~~~~ 131 (189)
.+. ++ +.|++||++|..... .. ..+|+.+
T Consensus 730 ---------------------------------~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g 776 (1878)
T 2uv9_A 730 ---------------------------------YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLR 776 (1878)
T ss_dssp ---------------------------------HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHH
T ss_pred ---------------------------------HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHH
Confidence 122 34 579999999865432 11 1366777
Q ss_pred HHHHHHHHH------HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHh
Q psy3626 132 MKNIVTAMK------EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180 (189)
Q Consensus 132 ~~~ll~~~~------~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l 180 (189)
+.++++.++ +.+.++||++||..+... ....|..+|..++.+.
T Consensus 777 ~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g------g~~aYaASKAAL~aLt 825 (1878)
T 2uv9_A 777 LLGAIKTQKKERGYETRPAQVILPLSPNHGTFG------NDGLYSESKLALETLF 825 (1878)
T ss_dssp HHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS------CCSSHHHHHHHHTTHH
T ss_pred HHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC------CchHHHHHHHHHHHHH
Confidence 666665532 223469999999876543 1335777777766553
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.88 E-value=4.5e-09 Score=83.60 Aligned_cols=111 Identities=18% Similarity=0.159 Sum_probs=74.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
+|||+|+||+|++|..++..|+++| ++|++++++++ ... ..|+ .....
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~--------~~dL----------~~~~~---------- 57 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGV--------TADI----------SHMDT---------- 57 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHH--------HHHH----------HTSCS----------
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhH--------HHHh----------hcccc----------
Confidence 4689999999999999999999888 78888887653 100 0011 00000
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
+..+ .+ +....++.+++.++|+||+++|....... ...|+.+++++++++.+.+.+.+|+++|
T Consensus 58 -------~~~v---~~-~~~t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 58 -------GAVV---RG-FLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp -------SCEE---EE-EESHHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred -------cceE---EE-EeCCCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 0011 11 12345566778888999999886543321 3478899999999999988777777766
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=7.8e-08 Score=68.12 Aligned_cols=59 Identities=22% Similarity=0.245 Sum_probs=45.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHH
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKK 61 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~ 61 (189)
++|+|+|+ |.+|..+++.|.+.|++|++++|+++....+. ..+..++.+|..+++.+.+
T Consensus 20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~ 79 (155)
T 2g1u_A 20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKE 79 (155)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHT
T ss_pred CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHH
Confidence 58999996 99999999999999999999999887766543 3445556666666554443
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.3e-08 Score=70.42 Aligned_cols=57 Identities=19% Similarity=0.243 Sum_probs=40.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHH
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADV 59 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~ 59 (189)
|+|+|+|+ |++|+.+++.|.+.|++|++++|+++....+.. .++.++.+|..+++.+
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l 62 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTL 62 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHH
Confidence 68999996 999999999999999999999987654432211 1334445555554433
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=78.81 Aligned_cols=73 Identities=16% Similarity=0.149 Sum_probs=59.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|++|+|+| +|++|+++++.|++.|++|++.+|++++...+.. .++..+.+|+++.+++.++++++|.++++++
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 46899998 7999999999999999999999998765443322 2366788899998888888888888888776
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.2e-08 Score=79.72 Aligned_cols=74 Identities=20% Similarity=0.216 Sum_probs=62.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-----CceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-----SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++||||+|++|++++..|+++|++|+++.|++++...+.. .++.++.+|+++++++++.++.+|.+|++++.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI 198 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCCc
Confidence 589999999999999999999999999999998655443211 24567889999999999999999999999874
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.66 E-value=2e-08 Score=79.91 Aligned_cols=111 Identities=13% Similarity=0.028 Sum_probs=71.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-------cEEEEecC----CCCCCcccCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-------EVCTLLRD----PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|||+|+||+|++|++++..|+..++ +|.++++. +++... ...|+. ...-
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g--------~~~dl~---------~~~~--- 65 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQG--------VMMEID---------DCAF--- 65 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHH--------HHHHHH---------TTTC---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchh--------hHHHHh---------hhcc---
Confidence 5899999999999999999998875 67777765 211110 000000 0000
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCC-c
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYN-V 144 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~-~ 144 (189)
. +..++....+..+++.++|+||+++|....... ...|+.+++++++++.+.+ .
T Consensus 66 -----------------~---~~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p 125 (329)
T 1b8p_A 66 -----------------P---LLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASR 125 (329)
T ss_dssp -----------------T---TEEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred -----------------c---ccCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 001222223456677788888888886553321 2378889999999999984 6
Q ss_pred c-EEEEecc
Q psy3626 145 S-VVSVCLS 152 (189)
Q Consensus 145 ~-~~i~iSS 152 (189)
+ +||++|.
T Consensus 126 ~a~ii~~SN 134 (329)
T 1b8p_A 126 NIKVLVVGN 134 (329)
T ss_dssp TCEEEECSS
T ss_pred CeEEEEccC
Confidence 6 8888876
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.4e-07 Score=66.62 Aligned_cols=70 Identities=17% Similarity=0.271 Sum_probs=49.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC-CC---CCcccCCceeEEeccccChhHHHHh-hhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-QR---LPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~-~~---~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~ 72 (189)
++++|+|+ |.+|+.+++.|.+.|++|+++++++ +. +......++.++.+|.++++.++++ ++++|.++++
T Consensus 4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 47999996 9999999999999999999999974 21 1111123466777777777766654 5555544433
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.62 E-value=4.2e-08 Score=80.22 Aligned_cols=73 Identities=15% Similarity=0.119 Sum_probs=56.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC---CcEEEEecCCCCCCcccC-------CceeEEeccccChhHHHHhhhc--Ccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG---LEVCTLLRDPQRLPSEYH-------SKVEIIQGDVLKLADVKKAIEG--KDG 68 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~--~~~ 68 (189)
|++|+|+|+ |++|+.+++.|+++| .+|++.+|++++...+.. .++..+.+|+++++++++++++ +|.
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 899999998 999999999999987 389999998765543311 2467778888888888888776 676
Q ss_pred eeeecc
Q psy3626 69 LEVCTL 74 (189)
Q Consensus 69 ~~~~~~ 74 (189)
++++++
T Consensus 80 Vin~ag 85 (405)
T 4ina_A 80 VLNIAL 85 (405)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 666654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.60 E-value=2.1e-07 Score=73.24 Aligned_cols=110 Identities=20% Similarity=0.191 Sum_probs=71.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEec--CCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLR--DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|||+|+||+|++|..++..|+..++ ++.++++ .++++. -...|+.+.. . .
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~--------~~~~dl~~~~------~-~----------- 54 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTV--------GQAADTNHGI------A-Y----------- 54 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHH--------HHHHHHHHHH------T-T-----------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHH--------HHHHHHHHHH------h-h-----------
Confidence 5899999999999999999988875 4666665 321110 0012222211 0 0
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
...+.+...+ .+++.++|+||+++|....... ...|+.+++++++++++.+.+.+|+++|
T Consensus 55 --------~~~~~v~~~~-------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S 119 (303)
T 1o6z_A 55 --------DSNTRVRQGG-------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (303)
T ss_dssp --------TCCCEEEECC-------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred --------CCCcEEEeCC-------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 0022222211 3557889999999986654322 2478889999999999998888888766
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.2e-07 Score=76.49 Aligned_cols=70 Identities=13% Similarity=0.059 Sum_probs=50.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|||+|+|+ |++|+.+++.|. +.++|++.+|+.++++.. ...+..+..|+.|++++.++++++|.||.+++
T Consensus 17 mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p 86 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred cEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecC
Confidence 68999998 999999998885 458899988876555432 23455666777777777777776666655543
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.6e-07 Score=74.25 Aligned_cols=113 Identities=15% Similarity=0.190 Sum_probs=69.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEec--CCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLR--DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|||+|+||+|++|+.++..|+..+. ++.++++ +++.+. -...|+.+. . .+.+.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~--------~~~~dl~~~---~-~~~~~----------- 57 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLE--------GLREDIYDA---L-AGTRS----------- 57 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHH--------HHHHHHHHH---H-TTSCC-----------
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhH--------HHHHHHHHh---H-HhcCC-----------
Confidence 4899999999999999999998874 4666665 221110 001111110 0 00000
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
.+.+...+ +.+.+++.++|+||+++|....... ...|+.+++++++++++.+ +++|+++|
T Consensus 58 ----------~~~i~~~~----d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S 122 (313)
T 1hye_A 58 ----------DANIYVES----DENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT 122 (313)
T ss_dssp ----------CCEEEEEE----TTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred ----------CeEEEeCC----cchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 11111111 1134567889999999986543321 3478899999999999988 87777776
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.5e-07 Score=68.31 Aligned_cols=68 Identities=12% Similarity=0.087 Sum_probs=49.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh--hhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA--IEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~ 70 (189)
++++|+| .|.+|..+++.|.+. |++|++++++++....+...+..++.+|.++++.+.++ ++++|.++
T Consensus 40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 4799999 599999999999999 99999999987655443334455666777766655544 44444433
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2e-07 Score=91.24 Aligned_cols=65 Identities=12% Similarity=0.169 Sum_probs=52.3
Q ss_pred ceEEEEcCCCh-hhHHHHHHHHHcCCcEEEEecCCCC-----CCcc------cCCceeEEeccccChhHHHHhhhcC
Q psy3626 2 KKIAIFGATGM-TGLCSLEAALKQGLEVCTLLRDPQR-----LPSE------YHSKVEIIQGDVLKLADVKKAIEGK 66 (189)
Q Consensus 2 ~~i~ItGatG~-iG~~l~~~L~~~g~~v~~~~r~~~~-----~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~ 66 (189)
|+++||||+++ ||+++++.|+++|.+|++.+|+.+. +.++ .+..+..+.+|++++++++++++.+
T Consensus 2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 67999999999 9999999999999999999998765 2221 1235677888999988888877543
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.4e-07 Score=64.50 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=53.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh-hhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~ 70 (189)
++++|.|. |.+|+.+++.|.+.|++|++++++++....+...++.++.+|.++++.++++ ++++|.++
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 47999996 9999999999999999999999998766554445677788888888776654 34554444
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.9e-07 Score=69.73 Aligned_cols=70 Identities=20% Similarity=0.211 Sum_probs=52.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHh-hhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKA-IEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~ 72 (189)
|+|+|+|+ |.+|+.+++.|.++|++|++++++++....+. ..+..++.+|.++++.++++ ++++|.++.+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 57999996 99999999999999999999999876655432 13566777888877776655 4555544433
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.39 E-value=4.4e-07 Score=68.43 Aligned_cols=69 Identities=19% Similarity=0.230 Sum_probs=55.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh-hhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~ 73 (189)
++++|+|+ |.+|+.+++.|.+.|+ |++++++++...... .++.++.+|.++++.++++ ++++|.++++.
T Consensus 10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 57999997 9999999999999999 999999876655444 5677888999888888766 67777666544
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.36 E-value=2.4e-07 Score=76.99 Aligned_cols=74 Identities=15% Similarity=0.148 Sum_probs=61.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|++|+|+|+ |++|+.+++.|++. +++|++++|++++...+.. .++..+..|+.+.+++.++++++|.||++++.
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 578999997 99999999999998 7899999998766544322 34667789999999999999999999988764
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.35 E-value=2.9e-06 Score=68.50 Aligned_cols=82 Identities=21% Similarity=0.141 Sum_probs=64.1
Q ss_pred ceEEEEcCCChhhHHHHHHHH-HcCCcEEEEecCCCCCCcc------------------cCCceeEEeccccChhHHHHh
Q psy3626 2 KKIAIFGATGMTGLCSLEAAL-KQGLEVCTLLRDPQRLPSE------------------YHSKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~-~~g~~v~~~~r~~~~~~~~------------------~~~~~~~~~~d~~~~~~~~~~ 62 (189)
|+++||||+.++|.+.+..|. ..|..++++.+..+...+. .+.....+.+|+++++++++.
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 689999999999999999998 5799999988876544321 134567788888888888777
Q ss_pred hhcCcceeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccC
Q psy3626 63 IEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTR 119 (189)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~ 119 (189)
++. +.+.+++.|++||+++..
T Consensus 131 i~~------------------------------------i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 131 IEE------------------------------------AKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHH------------------------------------HHHTTCCEEEEEECCCCS
T ss_pred HHH------------------------------------HHHhcCCCCEEEEecccc
Confidence 753 456678899999998854
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.33 E-value=4.1e-06 Score=63.12 Aligned_cols=35 Identities=31% Similarity=0.426 Sum_probs=32.7
Q ss_pred ceEEEEcC----------------CChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGA----------------TGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGa----------------tG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
|+++|||| +|++|.++++.|+++|++|+++.|..+
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRA 54 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 68999999 999999999999999999999999753
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.4e-06 Score=71.25 Aligned_cols=71 Identities=18% Similarity=0.261 Sum_probs=56.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh-hhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~ 73 (189)
++|+|+|. |.+|+.+++.|.+.|++|++++++++....+...+..++.+|.++++.++++ ++.++.++++.
T Consensus 5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence 57999996 9999999999999999999999998776655445677888888888877766 55565544433
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=9.9e-06 Score=60.85 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=31.4
Q ss_pred ceEEEEcC----------------CChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGA----------------TGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGa----------------tG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+++|||| +|.+|.++++.|+++|++|+++.++.
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc
Confidence 68999999 79999999999999999999998765
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-06 Score=68.78 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=72.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+||.++| -|..|..++++|++.||+|++++|++++.+.+...+.+ -.++.+++.+.+|.++.|.+
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~-------~a~s~~e~~~~~dvv~~~l~------ 68 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGAS-------AARSARDAVQGADVVISMLP------ 68 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-------ECSSHHHHHTTCSEEEECCS------
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCE-------EcCCHHHHHhcCCceeecCC------
Confidence 89999999 69999999999999999999999998766654322221 22455667778887776665
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC-CCCCcceehhhHHHHHHHHHHCCc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN-DLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
+...+.+.+.+.+.+.....+.. -....++....++.+.+.+.+.|+
T Consensus 69 -----------------~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~ 116 (300)
T 3obb_A 69 -----------------ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (300)
T ss_dssp -----------------CHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred -----------------chHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 45555555543322111110000 001123456678888888888775
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.04 E-value=1.9e-06 Score=63.13 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=32.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|+||+|.+|..+++.+...|.+|++++|+++..
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~ 76 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR 76 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 5799999999999999999998999999999875443
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=2.4e-06 Score=67.97 Aligned_cols=113 Identities=16% Similarity=0.104 Sum_probs=67.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--c-----EEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--E-----VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~-----v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+||+|+||+|++|+.++..|...+. + +.++++.+.. .. .+....-+..+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~-~~---------------~~g~a~DL~~~~~------ 61 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMM-GV---------------LDGVLMELQDCAL------ 61 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGH-HH---------------HHHHHHHHHHTCC------
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCcc-cc---------------chhhHhhhHhhhh------
Confidence 5899999999999999999988764 4 6666654210 00 0001111111100
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCcc--EE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVS--VV 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~--~~ 147 (189)
| ... ++....+..+.+.++|++|+++|..... .-.+.|...++++++++.+.+.+ ++
T Consensus 62 ---~---------~~~----~~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~v 125 (333)
T 5mdh_A 62 ---P---------LLK----DVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKV 125 (333)
T ss_dssp ---T---------TEE----EEEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEE
T ss_pred ---c---------ccC----CEEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 0 000 0111123456678899999998865432 12347888999999999998765 56
Q ss_pred EEecc
Q psy3626 148 SVCLS 152 (189)
Q Consensus 148 i~iSS 152 (189)
+++|-
T Consensus 126 ivvsN 130 (333)
T 5mdh_A 126 IVVGN 130 (333)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 66654
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=98.02 E-value=4.9e-06 Score=66.05 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=57.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh-hhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~ 73 (189)
++++|.|. |.+|+.+++.|.++|+ |++++++++..+ +...+..++.+|.++++.++++ ++++|.++.+.
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 47999996 9999999999999999 999999887766 5556788999999999988877 77777665444
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.01 E-value=4e-05 Score=60.20 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=50.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|++|++++|+++....+...++. -..+..++++++|.++.+++
T Consensus 21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~-------~~~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGAS-------VCESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCE-------ECSSHHHHHHHCSEEEECCS
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCe-------EcCCHHHHHHhCCEEEEEcC
Confidence 78999999 59999999999999999999999998776554322222 12345566778888887775
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=98.00 E-value=3.2e-05 Score=60.01 Aligned_cols=66 Identities=14% Similarity=0.155 Sum_probs=50.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|++|++++|++++.+.+...++. -..+.+++++++|.++.+++
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGAR-------QASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCE-------ECSCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe-------ecCCHHHHHHcCCEEEEEcC
Confidence 88999999 59999999999999999999999998776554322221 12345566778888887775
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1e-05 Score=63.79 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=30.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~ 35 (189)
|||+|+|++|++|..++..|+..+ .++.++++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 489999999999999999999887 6889998875
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.98 E-value=6.3e-06 Score=66.02 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=28.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-----C-cEEEEecC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-----L-EVCTLLRD 34 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-----~-~v~~~~r~ 34 (189)
|+||+|.||||.+|+.+++.|++++ + +++.+.++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~ 48 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA 48 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence 4699999999999999999999877 3 67776543
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=9.5e-07 Score=65.46 Aligned_cols=71 Identities=17% Similarity=0.125 Sum_probs=49.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC-ceeEEe-ccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS-KVEIIQ-GDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+|+||+|.+|+.+++.|++.|++|++++|+++....+... .. .+. .|+. .+++.++++++|.+++++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence 4799999899999999999999999999999986554332111 10 000 2232 2355667788998887765
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.7e-06 Score=70.58 Aligned_cols=72 Identities=22% Similarity=0.263 Sum_probs=60.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHh-hhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKA-IEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~ 74 (189)
|||+|.|+ |.+|+.+++.|.++|++|++++++++....+. ...+..+.+|.++++-++++ ++.+|.++.++.
T Consensus 4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 78999996 99999999999999999999999987776543 23678999999999998887 577887776553
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.4e-05 Score=65.87 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=38.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCce
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKV 46 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~ 46 (189)
|.+|.|.| .|++|..++..|.+.|++|++++.++++.+.+.....
T Consensus 21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~ 65 (444)
T 3vtf_A 21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRP 65 (444)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCC
Confidence 67999999 6999999999999999999999999877666544433
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00014 Score=56.88 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=67.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
+||.++| -|..|..++++|++.||+|++++|++++.+.+...+... .++..++++.+|.++.+.....
T Consensus 6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-------~~s~~e~~~~~dvvi~~l~~~~---- 73 (297)
T 4gbj_A 6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATV-------VENAIDAITPGGIVFSVLADDA---- 73 (297)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEE-------CSSGGGGCCTTCEEEECCSSHH----
T ss_pred CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeE-------eCCHHHHHhcCCceeeeccchh----
Confidence 3799999 699999999999999999999999998887765443332 2345566778888776665100
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVS 148 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i 148 (189)
.+. +... ..+...+.+-+++|.+. ++....++.+.+.+.+.|+ +++
T Consensus 74 ------~~~----~v~~-~~~~~~~~~~~iiid~s---------T~~p~~~~~~~~~~~~~g~-~~l 119 (297)
T 4gbj_A 74 ------AVE----ELFS-MELVEKLGKDGVHVSMS---------TISPETSRQLAQVHEWYGA-HYV 119 (297)
T ss_dssp ------HHH----HHSC-HHHHHHHCTTCEEEECS---------CCCHHHHHHHHHHHHHTTC-EEE
T ss_pred ------hHH----HHHH-HHHHhhcCCCeEEEECC---------CCChHHHHHHHHHHHhcCC-cee
Confidence 000 0000 12334444455565542 2345667888888888875 443
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0001 Score=57.05 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=50.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+|+|.|+| .|.+|..++..|.+.|++|++++|++++...+...++. -.++++++++++|.++.+++
T Consensus 1 s~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 1 SQKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAE-------RAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCE-------ECSSHHHHHHHCSEEEECCS
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe-------ecCCHHHHHhcCCEEEEEcC
Confidence 47899999 59999999999999999999999998776554333222 12355667778888887775
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0001 Score=58.07 Aligned_cols=66 Identities=23% Similarity=0.214 Sum_probs=50.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|++|++++|++++.+.+...++.. ..+++++++++|.++.+++
T Consensus 31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATI-------HEQARAAARDADIVVSMLE 96 (320)
T ss_dssp CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEe-------eCCHHHHHhcCCEEEEECC
Confidence 46899999 599999999999999999999999977655443333221 2345667788888887775
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00011 Score=57.20 Aligned_cols=64 Identities=13% Similarity=0.056 Sum_probs=48.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+| .|.+|..++..|.+.|++|++++|++++.+.+...++.. .++++++++ +|.++.+++
T Consensus 16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~-aDvvi~~vp 79 (296)
T 3qha_A 16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL-------ADSVADVAA-ADLIHITVL 79 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE-------cCCHHHHHh-CCEEEEECC
Confidence 4899999 599999999999999999999999988776543333221 234455666 887776665
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.81 E-value=6.4e-05 Score=60.06 Aligned_cols=34 Identities=35% Similarity=0.406 Sum_probs=28.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRD 34 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~ 34 (189)
|+||.|.|++|.+|+.+++.|.++. .+++.+.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence 3589999999999999999998874 477777664
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.81 E-value=5.7e-05 Score=60.21 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=25.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC---cEEEEe
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL---EVCTLL 32 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~---~v~~~~ 32 (189)
++|+|.||+|.+|+.+++.|.++++ ++..+.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 5899999999999999999986654 455553
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.77 E-value=3.7e-05 Score=61.20 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=30.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~ 35 (189)
|+||.|.|+||++|+.+++.|.++ ++++..+.++.
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~ 39 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA 39 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence 889999999999999999999985 67887775544
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.77 E-value=8.4e-06 Score=63.68 Aligned_cols=73 Identities=19% Similarity=0.082 Sum_probs=47.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEe--------ccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQ--------GDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~--------~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
||+|.|+|+ |.+|..++..|.+.|++|++++|+++..+.+...++.... .+..+..++...++++|.++.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 679999996 9999999999999999999999987655433222222211 1222333333344477777766
Q ss_pred cc
Q psy3626 73 TL 74 (189)
Q Consensus 73 ~~ 74 (189)
+.
T Consensus 82 v~ 83 (316)
T 2ew2_A 82 TK 83 (316)
T ss_dssp SC
T ss_pred ec
Confidence 64
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=2e-05 Score=58.66 Aligned_cols=65 Identities=18% Similarity=0.282 Sum_probs=48.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| +|.+|+.+++.|.+.|++|++++|+++........++... +..++++++|.++.++.
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEECSC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEECCC
Confidence 46899999 6999999999999999999999998765543332233321 34556788998887775
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.75 E-value=4.6e-05 Score=63.01 Aligned_cols=72 Identities=19% Similarity=0.264 Sum_probs=49.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEe-------------ccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQ-------------GDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-------------~d~~~~~~~~~~~~~~~~ 68 (189)
|+|.|+|. |.+|..++..|.+.|++|++++|++++.+.+......++. ..+.-..+..++++++|.
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 69999995 9999999999999999999999987655443221111111 111112345556778888
Q ss_pred eeeecc
Q psy3626 69 LEVCTL 74 (189)
Q Consensus 69 ~~~~~~ 74 (189)
++.+++
T Consensus 82 ViiaVp 87 (450)
T 3gg2_A 82 IFIAVG 87 (450)
T ss_dssp EEECCC
T ss_pred EEEEcC
Confidence 877775
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.75 E-value=7.9e-05 Score=58.39 Aligned_cols=66 Identities=21% Similarity=0.249 Sum_probs=49.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..+++.|++.|++|++++|+++....+...++. ...++.++++++|.|+.+++
T Consensus 9 ~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 9 EFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAH-------LCESVKAALSASPATIFVLL 74 (306)
T ss_dssp SCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCE-------ECSSHHHHHHHSSEEEECCS
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-------ecCCHHHHHhcCCEEEEEeC
Confidence 36899999 59999999999999999999999987665543222221 12345667788898887775
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00015 Score=57.76 Aligned_cols=32 Identities=38% Similarity=0.430 Sum_probs=27.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC---CcEEEEe
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG---LEVCTLL 32 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~ 32 (189)
|+||.|.||+|.+|+.+++.|.+++ .+++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 6799999999999999999999873 4566665
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.66 E-value=1.2e-05 Score=62.37 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=34.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
||+|.|+|+||.+|+.+++.|.+.|++|++++|+++...
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~ 49 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRD 49 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 469999998899999999999999999999999865443
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.65 E-value=1.9e-05 Score=63.66 Aligned_cols=72 Identities=24% Similarity=0.219 Sum_probs=55.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |.+|..+++.+...|++|++++|++++...... ... .+..|..+.+++++.++++|.++.+++.
T Consensus 167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG-RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc-eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 58999998 999999999999999999999998765432211 111 1456777788899999999999888763
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=9.4e-05 Score=60.76 Aligned_cols=39 Identities=28% Similarity=0.244 Sum_probs=33.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
||+|.|+| .|++|..++..|.+ |++|++++|++++.+.+
T Consensus 36 ~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l 74 (432)
T 3pid_A 36 FMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDML 74 (432)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHH
Confidence 57999999 59999999999887 99999999997766543
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0002 Score=56.32 Aligned_cols=37 Identities=27% Similarity=0.258 Sum_probs=31.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
||||.|+|+ |.+|..++..|...|+ +|.+++++++++
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~ 39 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVP 39 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHH
Confidence 368999998 9999999999999886 888888775433
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00031 Score=55.62 Aligned_cols=34 Identities=29% Similarity=0.496 Sum_probs=29.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~ 36 (189)
+||.|+|+ |.+|..++..|+..|. ++.+++++++
T Consensus 6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~ 41 (326)
T 3pqe_A 6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKE 41 (326)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchH
Confidence 58999996 9999999999999886 7888887643
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00035 Score=57.66 Aligned_cols=71 Identities=21% Similarity=0.290 Sum_probs=49.7
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEecc-------------ccChhHHHHhhhcCcce
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGD-------------VLKLADVKKAIEGKDGL 69 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d-------------~~~~~~~~~~~~~~~~~ 69 (189)
+|.|+| .|++|..++..|.+.|++|++++|++++.+.+.......+.-+ +.--.+++++++++|.+
T Consensus 10 ~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 10 RIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred EEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 789999 5999999999999999999999999987765543322222111 11113445566777777
Q ss_pred eeecc
Q psy3626 70 EVCTL 74 (189)
Q Consensus 70 ~~~~~ 74 (189)
+.+++
T Consensus 89 ii~Vp 93 (446)
T 4a7p_A 89 FIAVG 93 (446)
T ss_dssp EECCC
T ss_pred EEEcC
Confidence 76654
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.59 E-value=1.6e-05 Score=62.77 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=32.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|+||+|.+|..+++.+...|++|++++|++++.
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~ 178 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA 178 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 4799999999999999999998999999999875443
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00018 Score=55.56 Aligned_cols=35 Identities=34% Similarity=0.329 Sum_probs=29.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEE-ecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTL-LRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~-~r~~ 35 (189)
|+||.|.|++|.+|+.+++.+.+. ++++.+. +|++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG 43 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence 579999999999999999999876 7777775 5554
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00012 Score=57.09 Aligned_cols=54 Identities=20% Similarity=0.182 Sum_probs=42.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|++|.|+||.|.+|..++..|.+.|++|++++|++.. +...+++++|.|++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~aDvVilavp 74 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILANADVVIVSVP 74 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTTCSEEEECSC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcCCCEEEEeCC
Confidence 4689999988999999999999999999999887531 23445667777766654
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00036 Score=55.89 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=28.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~ 35 (189)
+||.|.||+|.+|+.+++.|.++ +.+|+.+.+++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~ 43 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASE 43 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccc
Confidence 58999999999999999999887 46788786543
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.51 E-value=9.4e-05 Score=59.40 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=28.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~ 34 (189)
+||.|.||+|.+|+.+++.|.++. .+++.+.+.
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~ 50 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD 50 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 489999999999999999999874 477777654
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00022 Score=57.24 Aligned_cols=65 Identities=11% Similarity=0.056 Sum_probs=47.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcC---cceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGK---DGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~ 74 (189)
|+|.|+| .|.+|..++..|.+.|++|++++|+++....+...++. ...+++++++.+ |.|+.+++
T Consensus 23 mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-------~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 23 MQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIA-------GARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCB-------CCSSHHHHHHHSCSSCEEEECSC
T ss_pred CEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCE-------EeCCHHHHHhcCCCCCEEEEeCC
Confidence 7899999 69999999999999999999999987665543322221 122344455555 88777665
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00061 Score=47.10 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=28.1
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++|.|.|++ |.+|..+++.|++.|++|+.+.++
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~ 50 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 50 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCC
Confidence 579999987 889999999999999986666554
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00021 Score=56.70 Aligned_cols=37 Identities=24% Similarity=0.156 Sum_probs=32.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
|||.|+|+ |.+|..++..|...|+ +|.+++++++.++
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~ 47 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPE 47 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHH
Confidence 58999997 9999999999999998 9999998865443
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00024 Score=55.44 Aligned_cols=66 Identities=18% Similarity=0.196 Sum_probs=47.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+| .|.+|..++..|.+.|++|++++|+++..+.+...+.... ..++.++++++|.++.+++
T Consensus 8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~------~~~~~e~~~~aDvvi~~vp 73 (303)
T 3g0o_A 8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGA------AASAREFAGVVDALVILVV 73 (303)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEE------ESSSTTTTTTCSEEEECCS
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccc------cCCHHHHHhcCCEEEEECC
Confidence 6899999 5999999999999999999999998766554322222211 1233445677787777665
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.47 E-value=4.5e-05 Score=60.87 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=30.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~ 35 (189)
|+||.|+|++|++|..++..++..| .+|.++++.+
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 4689999999999999999999887 4788888754
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00011 Score=57.89 Aligned_cols=73 Identities=19% Similarity=0.169 Sum_probs=54.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCC---CCCCcccC-----CceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDP---QRLPSEYH-----SKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~---~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
++++|+|+ |.+|+.++..|.+.|. +|++..|++ ++...+.. ....+...++.+.+++.+.+.++|.+|.+
T Consensus 155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINa 233 (315)
T 3tnl_A 155 KKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNA 233 (315)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEEC
Confidence 58999996 9999999999999998 899999983 33332211 12233445666667788889999999988
Q ss_pred ccc
Q psy3626 73 TLL 75 (189)
Q Consensus 73 ~~~ 75 (189)
+++
T Consensus 234 Tp~ 236 (315)
T 3tnl_A 234 TGV 236 (315)
T ss_dssp SST
T ss_pred ccC
Confidence 876
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0013 Score=49.93 Aligned_cols=113 Identities=14% Similarity=0.109 Sum_probs=68.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++|+|.|+ |.+|+.++..|...|. ++++++++.-..+.+.+. .-+...|+-. .+.+++.+....+
T Consensus 32 ~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq-~l~~~~diG~~Ka~~~~~~l~~~np---------- 99 (249)
T 1jw9_B 32 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQ-TLHSDATVGQPKVESARDALTRINP---------- 99 (249)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTC-TTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcc-cccChhhcCcHHHHHHHHHHHHHCC----------
Confidence 47999996 9999999999999996 888888886555544221 1122334432 2334333433211
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
.-++..+..++. .+++.+.+.+.|+||.+... ...-..+.+.|++.+.
T Consensus 100 -------~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~ 147 (249)
T 1jw9_B 100 -------HIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKV 147 (249)
T ss_dssp -------TSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTC
T ss_pred -------CcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCC
Confidence 013334444443 45666778899999998632 2333445666777664
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0012 Score=53.07 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=22.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHH-cCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALK-QGL 26 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~-~g~ 26 (189)
|+||.|.||+|++|+.+++.++. +++
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~ 27 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDF 27 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGG
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCC
Confidence 88999999999999999995544 454
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0002 Score=59.68 Aligned_cols=72 Identities=19% Similarity=0.201 Sum_probs=49.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEecc-------------ccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGD-------------VLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d-------------~~~~~~~~~~~~~~~~ 68 (189)
|+|.|+| .|++|..++..|.+.|++|++++|+++..+.+......++.-+ +.-..+.+.+++++|.
T Consensus 9 ~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 9 MNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred ceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 6899999 5999999999999999999999998766554432221111111 1111234456778888
Q ss_pred eeeecc
Q psy3626 69 LEVCTL 74 (189)
Q Consensus 69 ~~~~~~ 74 (189)
++.+++
T Consensus 88 viiaVp 93 (478)
T 2y0c_A 88 QFIAVG 93 (478)
T ss_dssp EEECCC
T ss_pred EEEEeC
Confidence 887775
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00066 Score=51.55 Aligned_cols=61 Identities=18% Similarity=0.210 Sum_probs=40.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|||.|.|++|.+|+.+++.+.+. ++++.+......++..+...... +..|.+.|+.+...+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~ 62 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNL 62 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHH
Confidence 48999999999999999999876 89988776654433322111122 445556655544433
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0012 Score=55.95 Aligned_cols=67 Identities=18% Similarity=0.216 Sum_probs=54.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhh-hcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~ 73 (189)
++++|.|+ |.+|+.+++.|.+.|++|++++++++...... .++.+|.++++.++++- +.+|.++.+.
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEECC
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEEEC
Confidence 47899996 99999999999999999999999998877542 78999999988876654 4555544333
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0002 Score=56.49 Aligned_cols=64 Identities=14% Similarity=0.013 Sum_probs=45.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCc-------ccCCceeEEeccccChh-HHHHhhhcCcceee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPS-------EYHSKVEIIQGDVLKLA-DVKKAIEGKDGLEV 71 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~-------~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~ 71 (189)
||+|.|+| .|.+|..++..|++.| ++|++++|+++..+. ....++ .. +..++++++|.++.
T Consensus 24 ~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---------~~~s~~e~~~~aDvVi~ 93 (317)
T 4ezb_A 24 MTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---------EPLDDVAGIACADVVLS 93 (317)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---------EEESSGGGGGGCSEEEE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---------CCCCHHHHHhcCCEEEE
Confidence 46899999 5999999999999999 999999998742221 111111 12 34456778888887
Q ss_pred ecc
Q psy3626 72 CTL 74 (189)
Q Consensus 72 ~~~ 74 (189)
+++
T Consensus 94 avp 96 (317)
T 4ezb_A 94 LVV 96 (317)
T ss_dssp CCC
T ss_pred ecC
Confidence 775
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.42 E-value=4e-05 Score=60.64 Aligned_cols=37 Identities=19% Similarity=0.171 Sum_probs=32.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|+||+|.+|..+++.+...|.+|++++|++++.
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~ 183 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA 183 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4799999999999999999999999999999876443
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00043 Score=55.66 Aligned_cols=25 Identities=28% Similarity=0.392 Sum_probs=22.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL 26 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~ 26 (189)
++|.|.||||++|..+++.|.++++
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~ 27 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTL 27 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCC
T ss_pred cEEEEECCCChHHHHHHHHHhcCCC
Confidence 5999999999999999999888765
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.41 E-value=3.2e-05 Score=53.76 Aligned_cols=69 Identities=16% Similarity=0.118 Sum_probs=50.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++|+|+ |.+|+.++..|...|++|++++|++++...+.. .+ .+....+++.+.++++|.++.+++..
T Consensus 22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~~~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEYVLINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEEEECSCHHHHHHTCSEEEECSCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----CceEeecCHHHHhcCCCEEEEeCCCC
Confidence 58999995 999999999999999999999998765543211 11 12223345566788999998888753
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00019 Score=55.42 Aligned_cols=34 Identities=32% Similarity=0.428 Sum_probs=27.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEE-ecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTL-LRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~-~r~~ 35 (189)
|||+|+|++|.+|+.+++.+.+. ++++.+. ++++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 58999999999999999998864 7888755 4444
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.40 E-value=7.6e-05 Score=59.29 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=32.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|+|++|.+|..++..+...|.+|++++|++++.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~ 204 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL 204 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4799999999999999999988999999999876544
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00026 Score=54.79 Aligned_cols=67 Identities=16% Similarity=0.085 Sum_probs=51.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |.+|+.++..|.+.|. +|++..|++++...+.. .+. ....+++...++++|.+|.+++.
T Consensus 118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~-----~~~~~~~~~~~~~aDiVInaTp~ 185 (277)
T 3don_A 118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NIN-----KINLSHAESHLDEFDIIINTTPA 185 (277)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCE-----EECHHHHHHTGGGCSEEEECCC-
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcc-----cccHhhHHHHhcCCCEEEECccC
Confidence 57999996 9999999999999998 89999999877765532 121 12345667778899999988875
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00031 Score=58.54 Aligned_cols=71 Identities=13% Similarity=0.231 Sum_probs=49.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC---ceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS---KVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|++|++.+|+++..+.+... ...+.. ..+++++.+.++.+|.|+.+++
T Consensus 4 ~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 4 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEEECSC
T ss_pred CCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceec--cCCHHHHHhhccCCCEEEEecC
Confidence 57899999 59999999999999999999999998766543211 111110 1234444444556888777765
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0018 Score=51.08 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=30.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~ 39 (189)
+||.|+|+ |.+|..++..|+..+. +|.+++.+++++.
T Consensus 8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~ 46 (318)
T 1y6j_A 8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAI 46 (318)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHH
Confidence 58999997 9999999999999886 8999998865543
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=6e-05 Score=60.19 Aligned_cols=37 Identities=11% Similarity=0.112 Sum_probs=32.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|+||+|.+|..++..+...|.+|++++|++++.
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~ 200 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL 200 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 4799999999999999999999999999999876543
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0031 Score=50.23 Aligned_cols=38 Identities=29% Similarity=0.474 Sum_probs=33.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
||||+|+|| |..|..++..+.+.|++|++++.++..+.
T Consensus 1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~ 38 (363)
T 4ffl_A 1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALI 38 (363)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChh
Confidence 999999995 99999999999889999999988776544
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00019 Score=55.53 Aligned_cols=65 Identities=11% Similarity=0.036 Sum_probs=46.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|+.++..|.+.|++|++++ +++....+...++. ...+..++++++|.++.+++
T Consensus 3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~-------~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 3 AMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAV-------NVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp -CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCB-------CCSSHHHHHHTCSEEEECCS
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEECC
Confidence 67999999 59999999999999999999888 76665543222221 12334556678888887774
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0023 Score=49.79 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=67.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|..++..|...|. ++++++++.-..+++.+. . +...|+-. .+..++.+....+
T Consensus 37 ~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq-~-~~~~diG~~Ka~aa~~~L~~iNP---------- 103 (292)
T 3h8v_A 37 FAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRL-F-FQPHQAGLSKVQAAEHTLRNINP---------- 103 (292)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC--------------CCTTSBHHHHHHHHHHHHCT----------
T ss_pred CeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccc-c-CChhhcCchHHHHHHHHHHhhCC----------
Confidence 47999996 9999999999999985 788888876666655432 1 33344433 3445555544322
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHh-----------cCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAI-----------EGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVV 147 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 147 (189)
.-++..+..++.+.+.+.+.+ .+.|+|+.+.. |...-..+-++|.+.+.. +
T Consensus 104 -------~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D----------n~~~R~~in~~c~~~~~P-l 165 (292)
T 3h8v_A 104 -------DVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD----------NFEARMTINTACNELGQT-W 165 (292)
T ss_dssp -------TSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS----------SHHHHHHHHHHHHHHTCC-E
T ss_pred -------CcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc----------chhhhhHHHHHHHHhCCC-E
Confidence 114556666666555555443 58999998752 222233456677777753 4
Q ss_pred EE
Q psy3626 148 SV 149 (189)
Q Consensus 148 i~ 149 (189)
|+
T Consensus 166 i~ 167 (292)
T 3h8v_A 166 ME 167 (292)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00029 Score=55.75 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=29.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~ 36 (189)
++||.|+|+ |.+|..++..|+..+. ++.+++++++
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~ 45 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKD 45 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChH
Confidence 368999996 9999999999998876 7888888654
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=7.8e-05 Score=61.34 Aligned_cols=72 Identities=25% Similarity=0.333 Sum_probs=49.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEe-------------ccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQ-------------GDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-------------~d~~~~~~~~~~~~~~~~ 68 (189)
|+|.|+| .|.+|..++..|.+.|++|++++|++++.+.+......++. +.+.-..+...+++++|.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 4899999 59999999999999999999999987655443222111111 112222344556788999
Q ss_pred eeeecc
Q psy3626 69 LEVCTL 74 (189)
Q Consensus 69 ~~~~~~ 74 (189)
++.+++
T Consensus 80 viiaVp 85 (436)
T 1mv8_A 80 SFICVG 85 (436)
T ss_dssp EEECCC
T ss_pred EEEEcC
Confidence 888876
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0012 Score=52.16 Aligned_cols=37 Identities=27% Similarity=0.225 Sum_probs=32.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
|+||.|+|+ |.+|..++..|...|+ +|.+++++++.+
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~ 44 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTP 44 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhH
Confidence 468999997 9999999999999988 999999887543
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0042 Score=48.30 Aligned_cols=61 Identities=18% Similarity=0.131 Sum_probs=48.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.+|+.+++.|...|++|++++|++..... ....++++++++++|.++++++.
T Consensus 123 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~~l~ell~~aDiV~l~~P~ 183 (290)
T 3gvx_A 123 KALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------------DVISESPADLFRQSDFVLIAIPL 183 (290)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------------SEECSSHHHHHHHCSEEEECCCC
T ss_pred chheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc------------ccccCChHHHhhccCeEEEEeec
Confidence 5899999 5999999999999999999999998755432 11224677888999998888864
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=8.7e-05 Score=57.27 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=44.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+|+ |.+|..++..|.+ |++|++++|+++........++... + ..++++++|.++.++.
T Consensus 1 M~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~------~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 1 MEKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--V------PLERVAEARVIFTCLP 64 (289)
T ss_dssp -CCEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--C------CGGGGGGCSEEEECCS
T ss_pred CCeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--C------HHHHHhCCCEEEEeCC
Confidence 789999995 9999999999999 9999999998765543321122211 1 2334566777776665
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00021 Score=56.79 Aligned_cols=72 Identities=22% Similarity=0.155 Sum_probs=48.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhh-----cCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE-----GKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~~~ 74 (189)
++++|+|++|.+|..+++.+...|.+|++++|++++.+.....+.. ...|..+.+++.+.+. ++|.++.+++
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 247 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE-VFIDFTKEKDIVGAVLKATDGGAHGVINVSV 247 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC-EEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc-eEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence 4799999999999999999988999999999987665432222222 2236554333333332 4666665554
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00044 Score=57.53 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=32.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CC-cEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GL-EVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~-~v~~~~r~~~ 36 (189)
||+|.|+| .|++|..++..|.+. |+ +|++++|+++
T Consensus 18 ~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 57999999 599999999999999 99 9999999988
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00034 Score=56.93 Aligned_cols=38 Identities=26% Similarity=0.187 Sum_probs=32.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
|+|.|+|. |.+|..++..|.+ |++|++++|++++.+.+
T Consensus 1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l 38 (402)
T 1dlj_A 1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIVDILPSKVDKI 38 (402)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEECSCHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHhC-CCEEEEEECCHHHHHHH
Confidence 48999995 9999999999999 99999999987655543
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0015 Score=50.99 Aligned_cols=35 Identities=23% Similarity=0.152 Sum_probs=30.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQR 37 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~ 37 (189)
|||.|+|+ |.+|..++..|...|+ +|.+++++++.
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~ 37 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL 37 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHH
Confidence 58999998 9999999999998887 89999987644
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00053 Score=53.72 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=32.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRL 38 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~ 38 (189)
||+|.|+| .|.+|..++..|.+.| ++|++++|+++..
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~ 39 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKV 39 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHH
Confidence 78999999 5999999999999998 7899999876443
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.24 E-value=6.9e-05 Score=55.91 Aligned_cols=66 Identities=20% Similarity=0.130 Sum_probs=46.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEE-EecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCT-LLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~-~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|++|++ .+|+++....+... ++.... +....++++|.++.++.
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~~~aDvVilavp 90 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA-------VELKDALQADVVILAVP 90 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE-------CCHHHHTTSSEEEEESC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc-------ChHHHHhcCCEEEEeCC
Confidence 67999999 699999999999999999998 88887666543211 111111 11233677888877764
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00056 Score=56.95 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=49.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCceeEEecc------------ccChhHHHHhhhcC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQGD------------VLKLADVKKAIEGK 66 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~d------------~~~~~~~~~~~~~~ 66 (189)
||+|.|+| .|++|..++..|.+. |++|++++|++++.+.+......++..+ +.-..+...+++++
T Consensus 9 ~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 9 VSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 47999999 599999999999998 7999999998766554432222111111 11112234556778
Q ss_pred cceeeecc
Q psy3626 67 DGLEVCTL 74 (189)
Q Consensus 67 ~~~~~~~~ 74 (189)
|.++.+++
T Consensus 88 Dvvii~Vp 95 (481)
T 2o3j_A 88 DLIFISVN 95 (481)
T ss_dssp SEEEECCC
T ss_pred CEEEEecC
Confidence 88887765
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0015 Score=51.47 Aligned_cols=35 Identities=26% Similarity=0.334 Sum_probs=30.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQR 37 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~ 37 (189)
|||.|+|+ |.+|..++..|+..+. ++.+++++++.
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k 37 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGM 37 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHH
Confidence 58999996 9999999999998876 89999987754
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=51.31 Aligned_cols=108 Identities=19% Similarity=0.154 Sum_probs=65.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+|+ |.+|..++-.|..++ .++.+++..+....- ...|+.+ .....
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G--------~a~DL~h------~~~~~------------- 52 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG--------EAMDLAH------AAAGI------------- 52 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHH--------HHHHHHH------HHGGG-------------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchh--------hhhhhhc------ccccC-------------
Confidence 68999995 999999999998875 367777765422210 1112221 11000
Q ss_pred CCCccccCceeEE-eccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEII-QGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
+....+. ..|+ +.+.++|++|.++|......-. ..|..-.+.+.+.+.+.+.+.++.+
T Consensus 53 ------~~~~~i~~~~d~-------~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlv 116 (294)
T 2x0j_A 53 ------DKYPKIVGGADY-------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV 116 (294)
T ss_dssp ------TCCCEEEEESCG-------GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred ------CCCCeEecCCCH-------HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 0011122 1232 3467899999999976644222 3677778888888888876555544
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0007 Score=56.16 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=48.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCceeEEec------------cccChhHHHHhhhcC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVEIIQG------------DVLKLADVKKAIEGK 66 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~------------d~~~~~~~~~~~~~~ 66 (189)
||+|.|+| .|.+|..++..|.+. |++|++++|++++.+.+......++.. .+.-..+...+++++
T Consensus 5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~a 83 (467)
T 2q3e_A 5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEA 83 (467)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcC
Confidence 57899999 599999999999998 899999999876555432222111111 111112344566778
Q ss_pred cceeeecc
Q psy3626 67 DGLEVCTL 74 (189)
Q Consensus 67 ~~~~~~~~ 74 (189)
|.++.+++
T Consensus 84 DvViiaVp 91 (467)
T 2q3e_A 84 DLVFISVN 91 (467)
T ss_dssp SEEEECCC
T ss_pred CEEEEEcC
Confidence 88877765
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00087 Score=55.47 Aligned_cols=35 Identities=14% Similarity=0.390 Sum_probs=28.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CC---cEEEEecCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GL---EVCTLLRDPQR 37 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~---~v~~~~r~~~~ 37 (189)
++|+|+| .|.||+.+++.+.++ ++ .|++.++....
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~ 52 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK 52 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhh
Confidence 5899999 599999999999987 55 68888765544
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0018 Score=51.13 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=31.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
+||.|+|+ |.+|..++..|...|+ +|.+++++++.+
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l 41 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMP 41 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHH
Confidence 68999997 9999999999999998 888888876544
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00061 Score=47.51 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=28.6
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|.|.|++ |.+|..+++.|++.|++|+.+.++.
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~ 50 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKV 50 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence 579999998 8899999999999999866665543
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00049 Score=55.00 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=27.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEe
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLL 32 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~ 32 (189)
|+||.|.||+|.+|+.+++.|.++ ..++..+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 358999999999999999999876 45777775
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00012 Score=58.71 Aligned_cols=73 Identities=21% Similarity=0.170 Sum_probs=52.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |.+|+.++..+...|.+|++++|++++.+.+.......+.....+.+++.+.+.++|.+|.+++.
T Consensus 168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 58999998 99999999999999999999999876554332111111111223456677788899999888764
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00013 Score=58.45 Aligned_cols=71 Identities=18% Similarity=0.235 Sum_probs=47.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--------CceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--------SKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+|.|+|+ |.+|..++..|.+.|++|++++|+++..+.+.. +++. +...+.-..++.++++++|.++.++
T Consensus 30 mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~-l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 30 HPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYP-FPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp SCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCC-CCTTEEEESCHHHHHTTCCEEEECC
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCc-cCCCeEEECCHHHHHhcCCEEEECC
Confidence 68999995 999999999999999999999998654432211 1111 0111111234556778888887666
Q ss_pred c
Q psy3626 74 L 74 (189)
Q Consensus 74 ~ 74 (189)
.
T Consensus 108 p 108 (356)
T 3k96_A 108 P 108 (356)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0017 Score=51.26 Aligned_cols=37 Identities=30% Similarity=0.239 Sum_probs=31.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
|+||.|+|+ |.+|..++..|...+. ++.+++++++..
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~ 42 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMP 42 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHH
Confidence 368999995 9999999999999887 899999886543
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0001 Score=57.08 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=33.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++|.|+|+ |.+|..++..|.+.|++|++++|+++..+
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~ 41 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALD 41 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 58999995 99999999999999999999999876544
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.20 E-value=7.4e-05 Score=57.61 Aligned_cols=71 Identities=17% Similarity=0.038 Sum_probs=47.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++|+|+ |.+|+.++..|.+.|.+|++..|++++...+... ... ...+..+.+++.+ .++|.+|.+++..
T Consensus 120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~-~~~~~~~~~~~~~--~~~DivVn~t~~~ 191 (271)
T 1nyt_A 120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT-GSIQALSMDELEG--HEFDLIINATSSG 191 (271)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG-SSEEECCSGGGTT--CCCSEEEECCSCG
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc-CCeeEecHHHhcc--CCCCEEEECCCCC
Confidence 58999997 8999999999999999999999987654433110 000 0112222233322 5789999888753
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00038 Score=55.44 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=47.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccCh-hHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKL-ADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~ 74 (189)
+++|.|+| .|.+|..++..|.+.|++|++++|+++........++.. ..+. +.++.+.+++|.|+++++
T Consensus 8 ~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 8 SRPVCILG-LGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 36899999 599999999999999999999999876554322222211 1222 334445566788877775
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00019 Score=55.77 Aligned_cols=66 Identities=17% Similarity=0.117 Sum_probs=46.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|++|++++|+++........++.. ..+..++++++|.++.+++
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA-------CENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhCCCEEEEECC
Confidence 36899999 599999999999999999999999876554332222221 1233445667888777764
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0068 Score=47.67 Aligned_cols=64 Identities=17% Similarity=0.181 Sum_probs=50.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|++.|.| .|.+|+.+++.|...|++|++++|++..... +... ....+++++++++|+++++++.
T Consensus 140 ~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~----~~~~~l~ell~~aDiV~l~~Pl 203 (315)
T 3pp8_A 140 FSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWPG-----VESY----VGREELRAFLNQTRVLINLLPN 203 (315)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCTT-----CEEE----ESHHHHHHHHHTCSEEEECCCC
T ss_pred CEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhhh-----hhhh----cccCCHHHHHhhCCEEEEecCC
Confidence 6899999 5999999999999889999999998765432 1111 1236788999999998888764
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0021 Score=50.57 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=28.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~ 35 (189)
+||.|+|+ |.+|..++..|...+. ++.++++++
T Consensus 7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 48999998 9999999999988874 788887764
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0018 Score=45.04 Aligned_cols=30 Identities=30% Similarity=0.448 Sum_probs=25.9
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEE
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTL 31 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~ 31 (189)
++|+|.|++ |.+|..+++.|.+.|++|+.+
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V 55 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYDVYPV 55 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 579999998 889999999999999985444
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0058 Score=48.25 Aligned_cols=64 Identities=16% Similarity=0.166 Sum_probs=49.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.+|+.+++.|...|++|++++|++........ . ....+++++++++|+++++++.
T Consensus 138 ktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~----~-----~~~~~l~ell~~aDvV~l~lPl 201 (324)
T 3evt_A 138 QQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE----T-----VAFTATADALATANFIVNALPL 201 (324)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE----E-----EEGGGCHHHHHHCSEEEECCCC
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh----c-----cccCCHHHHHhhCCEEEEcCCC
Confidence 5899999 5999999999999999999999998765432210 1 1235677889999998887764
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0012 Score=52.90 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=26.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~ 34 (189)
++|.|.||||++|..+++.|.++ ..++..+..+
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~ 41 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK 41 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence 47999999999999999988776 4566666443
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0012 Score=52.90 Aligned_cols=33 Identities=27% Similarity=0.339 Sum_probs=26.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~ 34 (189)
++|.|.||||++|..+++.|.++ ..++..+..+
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~ 41 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK 41 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence 47999999999999999988776 4566666443
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00029 Score=54.53 Aligned_cols=65 Identities=15% Similarity=0.214 Sum_probs=47.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC---cEEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL---EVCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+|.|+|+ |.+|..++..|.+.|+ +|++++|++++...+... ++.. ..+..++++++|.++.++
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~-------~~~~~~~~~~aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT-------TQDNRQGALNADVVVLAV 71 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE-------ESCHHHHHSSCSEEEECS
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE-------eCChHHHHhcCCeEEEEe
Confidence 368999996 9999999999999998 999999998766543221 2221 123345677888887766
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00017 Score=57.35 Aligned_cols=72 Identities=19% Similarity=0.157 Sum_probs=48.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC-ceeEEec------cc-cChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS-KVEIIQG------DV-LKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-~~~~~~~------d~-~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+|.|+|+ |.+|..++..|.+.|++|++++|+++........ .+.+... .+ ...+++.++++++|.++.++
T Consensus 5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 58999996 9999999999999999999999987654433211 1211111 01 01223455677889888777
Q ss_pred c
Q psy3626 74 L 74 (189)
Q Consensus 74 ~ 74 (189)
.
T Consensus 84 ~ 84 (359)
T 1bg6_A 84 P 84 (359)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00062 Score=55.00 Aligned_cols=30 Identities=33% Similarity=0.426 Sum_probs=24.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEE
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTL 31 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~ 31 (189)
+||.|.||||++|..+++.|.++- .++..+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~hp~~el~~l 50 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKHPEFEIHAL 50 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHcCCCceEEEe
Confidence 479999999999999999888774 466554
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00015 Score=57.11 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=49.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec--CCCCCCcccCCce------eEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR--DPQRLPSEYHSKV------EIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r--~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+|.|+|+ |.+|..++..|.+.|++|++++| +++..+.+...+. ........++++..++++++|.++.++
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 48999995 99999999999999999999999 7654433221111 100012233335556678899888777
Q ss_pred cc
Q psy3626 74 LL 75 (189)
Q Consensus 74 ~~ 75 (189)
..
T Consensus 80 ~~ 81 (335)
T 1txg_A 80 ST 81 (335)
T ss_dssp CG
T ss_pred Ch
Confidence 53
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00025 Score=54.90 Aligned_cols=65 Identities=12% Similarity=0.108 Sum_probs=46.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+| .|.+|..++..|.+.|++|++++|+++....+...++... .+..++++++|.++.+++
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVV-------SSPADVAEKADRIITMLP 65 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEEC-------SSHHHHHHHCSEEEECCS
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeec-------CCHHHHHhcCCEEEEeCC
Confidence 4799999 5999999999999999999999998765544322222211 223445567777776663
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0014 Score=46.18 Aligned_cols=56 Identities=14% Similarity=0.093 Sum_probs=39.9
Q ss_pred CChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---------cCCceeEEeccccCh--hHHHHhhhc
Q psy3626 10 TGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---------YHSKVEIIQGDVLKL--ADVKKAIEG 65 (189)
Q Consensus 10 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~--~~~~~~~~~ 65 (189)
+|.++...++.|.+.|.+|++..|++...... .+.+...+.+|++++ ++++++++.
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~ 91 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAA 91 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHH
Confidence 36789999999999999999988865443211 133456677888887 777766643
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00019 Score=55.73 Aligned_cols=65 Identities=20% Similarity=0.234 Sum_probs=46.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+| .|.+|..++..|.+.|++|++++|+++........++.. ..+.+++++++|.++.++.
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhCCCEEEEECC
Confidence 5899999 599999999999999999999999876544332222221 1233445667888777775
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.002 Score=51.64 Aligned_cols=67 Identities=27% Similarity=0.316 Sum_probs=51.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
||+|+|+|+ |..|+.+++.+.+.|+++++++..+........ -.++..|..|.+.+.+..++.|.++
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~~~~~d~v~ 67 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA--DEQIVAGFFDSERIEDLVKGSDVTT 67 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS--SEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceEEECCCCCHHHHHHHHhcCCEEE
Confidence 899999996 899999999999999999999876544321111 1356678888888888887777654
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.004 Score=47.88 Aligned_cols=64 Identities=22% Similarity=0.113 Sum_probs=46.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |..|+.++..|.+.|.+|++..|++++...+...++... +. +++ .++|.+|.+++.
T Consensus 119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~---~~l----~~~DiVInaTp~ 182 (269)
T 3phh_A 119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--ME---PPK----SAFDLIINATSA 182 (269)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SS---CCS----SCCSEEEECCTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cH---HHh----ccCCEEEEcccC
Confidence 68999996 999999999999999999999999887665431112222 11 111 277888877765
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00042 Score=52.88 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=43.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCc-EEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLE-VCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~-v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+|+ |.+|+.++..|.+.|++ |.+++|+++........ ++... .++.++++++|.++.++.
T Consensus 11 m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~Dvvi~av~ 77 (266)
T 3d1l_A 11 TPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT-------TDLAEVNPYAKLYIVSLK 77 (266)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE-------SCGGGSCSCCSEEEECCC
T ss_pred CeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee-------CCHHHHhcCCCEEEEecC
Confidence 58999995 99999999999999998 88888886554432111 22211 122334556777666554
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00024 Score=53.79 Aligned_cols=67 Identities=27% Similarity=0.236 Sum_probs=47.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC--C------------CcccCCceeEEeccccChhHHHHhhhcC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR--L------------PSEYHSKVEIIQGDVLKLADVKKAIEGK 66 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--~------------~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 66 (189)
+|+|.|+| .|.+|..++..|.+.|++|++++|+++. . ..+... . ......+..++++++
T Consensus 19 ~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~e~~~~a 91 (245)
T 3dtt_A 19 GMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-H-----PHVHLAAFADVAAGA 91 (245)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-S-----TTCEEEEHHHHHHHC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-c-----CceeccCHHHHHhcC
Confidence 36899998 6999999999999999999999998765 1 111000 0 011123455667889
Q ss_pred cceeeecc
Q psy3626 67 DGLEVCTL 74 (189)
Q Consensus 67 ~~~~~~~~ 74 (189)
|.++.++.
T Consensus 92 DvVilavp 99 (245)
T 3dtt_A 92 ELVVNATE 99 (245)
T ss_dssp SEEEECSC
T ss_pred CEEEEccC
Confidence 98887775
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0004 Score=54.37 Aligned_cols=65 Identities=20% Similarity=0.214 Sum_probs=47.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+|+ |.+|..++..|.+.|++|++++|+++....+...++.. ..+..++++++|.++.++.
T Consensus 31 ~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL-------GRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE-------cCCHHHHHhcCCEEEEeCC
Confidence 68999995 99999999999999999999999877655432222221 1124455677888877775
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00085 Score=49.54 Aligned_cols=35 Identities=29% Similarity=0.208 Sum_probs=31.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
+|+|.|+| .|.+|+.++..|.+.|++|++++|+++
T Consensus 19 ~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 47899999 599999999999999999999999876
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00024 Score=56.01 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=47.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhh-----cCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE-----GKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~~~ 74 (189)
++++|+|++|.+|..+++.+...|.+|++++|++++.+....-+.. ...|..+.+++.+.+. +.|.++.+++
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 4799999999999999999999999999999876554332111221 2346655233333222 4666666654
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0024 Score=51.33 Aligned_cols=67 Identities=21% Similarity=0.129 Sum_probs=52.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|++|+|+|+ |.+|+.+++.+.+.|++|++++..+....... --.++..|..|.+.+.+..+.+|.+.
T Consensus 12 ~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~--ad~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 12 GATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV--AHEFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG--SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh--CCEEEECCCCCHHHHHHHHHhCCcce
Confidence 368999995 99999999999999999999988765443221 12366788899999999998887653
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00028 Score=55.38 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=46.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCC--CCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDP--QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|+ +|++++|++ +..+.....++.. ..+..++++++|.|+.++.
T Consensus 24 ~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVi~~vp 92 (312)
T 3qsg_A 24 AMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC-------KASVAEVAGECDVIFSLVT 92 (312)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE-------CSCHHHHHHHCSEEEECSC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE-------eCCHHHHHhcCCEEEEecC
Confidence 57899999 59999999999999999 999999974 3332221122211 2344566778888887775
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.001 Score=52.30 Aligned_cols=66 Identities=12% Similarity=0.185 Sum_probs=46.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCce-eEEeccccChhHHHH-hhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKV-EIIQGDVLKLADVKK-AIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~-~~~~~d~~~~~~~~~-~~~~~~~~~~~~~ 74 (189)
|+|.|+| .|.+|+.++..|.+.|+ +|++++|+++........++ .... .++++ +++++|.|+++++
T Consensus 34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~------~~~~~~~~~~aDvVilavp 103 (314)
T 3ggo_A 34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT------TSIAKVEDFSPDFVMLSSP 103 (314)
T ss_dssp SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE------SCTTGGGGGCCSEEEECSC
T ss_pred CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc------CCHHHHhhccCCEEEEeCC
Confidence 6899999 69999999999999999 99999998755443211111 0011 12334 5778888887775
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00017 Score=54.85 Aligned_cols=66 Identities=14% Similarity=0.058 Sum_probs=47.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|+.++..|.+.|++|.+++|+++....+... ++.. ..+..++++++|.++.++.
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY-------AMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB-------CSSHHHHHHTCSEEEECSC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe-------eCCHHHHHhcCCEEEEEeC
Confidence 68999999 59999999999999999999999987654432211 2211 1234455678898888775
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0051 Score=49.12 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=69.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|++.|.| .|.+|+.+++.|..-|++|++++|++.........++. ..++++++++.+|+++++++..+-+
T Consensus 165 ktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvV~l~~Plt~~t-- 234 (351)
T 3jtm_A 165 KTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAK-------FVEDLNEMLPKCDVIVINMPLTEKT-- 234 (351)
T ss_dssp CEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCE-------ECSCHHHHGGGCSEEEECSCCCTTT--
T ss_pred CEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCe-------EcCCHHHHHhcCCEEEECCCCCHHH--
Confidence 5899999 59999999999998899999999886443221111111 1246778899999988887742210
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
. .+.+. ...+.+..-.++|+++... +.-...+++++++.+.
T Consensus 235 -------~-----~li~~-~~l~~mk~gailIN~aRG~---------~vde~aL~~aL~~g~i 275 (351)
T 3jtm_A 235 -------R-----GMFNK-ELIGKLKKGVLIVNNARGA---------IMERQAVVDAVESGHI 275 (351)
T ss_dssp -------T-----TCBSH-HHHHHSCTTEEEEECSCGG---------GBCHHHHHHHHHHTSE
T ss_pred -------H-----HhhcH-HHHhcCCCCCEEEECcCch---------hhCHHHHHHHHHhCCc
Confidence 0 11122 2334444444555554331 3336778888877653
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0015 Score=54.04 Aligned_cols=57 Identities=21% Similarity=0.240 Sum_probs=39.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHH
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVK 60 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~ 60 (189)
++++|.|| |.+|..+++.| +++++|.++-+++++...+.. ++..++.+|.++++-++
T Consensus 236 ~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ 294 (461)
T 4g65_A 236 RRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLT 294 (461)
T ss_dssp CEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHH
T ss_pred cEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHh
Confidence 57999996 99999999987 556899999887655443211 34556666666665443
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00022 Score=55.71 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=51.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCC-ceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHS-KVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |.+|+.++..|.+.|. +|++..|++++...+... .... .++.+.+++.+.+.++|.+|.+++.
T Consensus 142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSV 214 (297)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCT
T ss_pred CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCC
Confidence 58999996 8999999999999997 899999987655433110 0000 0222335677788899999988876
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0059 Score=49.08 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=23.8
Q ss_pred ceEEEEcCCChhhHHHHH-HHHHcC---CcEEEEe
Q psy3626 2 KKIAIFGATGMTGLCSLE-AALKQG---LEVCTLL 32 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~-~L~~~g---~~v~~~~ 32 (189)
|+|.|.||||++|+.+++ .|.++. .++..+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 35 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS 35 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 589999999999999999 565555 3555443
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00013 Score=56.68 Aligned_cols=70 Identities=17% Similarity=0.228 Sum_probs=51.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccC------CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYH------SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|+ |.+|+.++..|.+.|. +|++..|++++.+.+.. ....+... +.+++.+.++++|.+|.+++
T Consensus 128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~---~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGV---DARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE---CSTTHHHHHHHSSEEEECSS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEc---CHHHHHHHHhcCCEEEECCC
Confidence 58999997 9999999999999998 69999999776554311 11222222 23456677889999998887
Q ss_pred c
Q psy3626 75 L 75 (189)
Q Consensus 75 ~ 75 (189)
.
T Consensus 204 ~ 204 (283)
T 3jyo_A 204 M 204 (283)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00027 Score=54.39 Aligned_cols=68 Identities=13% Similarity=0.194 Sum_probs=46.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhh-cCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE-GKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+.|+ +|++++|+++........++... . ..++...++ ++|.++.++.
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~---~--~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDE---G--TTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSE---E--ESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccc---c--cCCHHHHhcCCCCEEEEcCC
Confidence 88999999 59999999999999998 89999988654432211111100 0 012334566 8888877765
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0066 Score=47.66 Aligned_cols=34 Identities=26% Similarity=0.233 Sum_probs=28.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-C--CcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-G--LEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g--~~v~~~~r~~ 35 (189)
|||.|+||+|.+|..++..|.++ + .++.++++.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~ 37 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP 37 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC
Confidence 58999999999999999988875 4 4677777765
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.012 Score=46.71 Aligned_cols=61 Identities=23% Similarity=0.230 Sum_probs=47.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|++.|+|. |.+|+.+++.|...|++|++++|++.... +.. ...+++++++++|.++.+++.
T Consensus 165 ~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~-------~~~~l~ell~~aDvVil~vP~ 225 (333)
T 3ba1_A 165 KRVGIIGL-GRIGLAVAERAEAFDCPISYFSRSKKPNT-----NYT-------YYGSVVELASNSDILVVACPL 225 (333)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSE-------EESCHHHHHHTCSEEEECSCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCchhcc-----Cce-------ecCCHHHHHhcCCEEEEecCC
Confidence 58999995 99999999999999999999999875432 111 123456778899998877763
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00096 Score=50.65 Aligned_cols=59 Identities=8% Similarity=0.084 Sum_probs=43.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC----CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG----LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+|+ |.+|+.++..|.+.| ++|++++|+++. .++.. ..+....++++|.++.++.
T Consensus 5 m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~-------~~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 5 IKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNY-------MSSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEE-------CSCHHHHHHHCSEEEECSC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEE-------eCCHHHHHhcCCEEEEEeC
Confidence 68999996 999999999999999 799999998765 11111 1123445667888877765
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00052 Score=54.19 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=32.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
.+++|+||+|.+|..++..+...|.+|+++++++++.
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~ 186 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL 186 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4799999999999999999888899999999876543
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0011 Score=52.29 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=28.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~ 35 (189)
+||.|+|+ |.+|..++..|+..+. ++.++++++
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 68999998 9999999999988875 788887754
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00029 Score=56.85 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=51.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|+ |.+|..+++.+...|.+|++++|++++...... .+.. +..+..+..++.+.++++|.++.+++
T Consensus 169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~-~~~~~~~~~~l~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR-IHTRYSSAYELEGAVKRADLVIGAVL 240 (377)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-SEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe-eEeccCCHHHHHHHHcCCCEEEECCC
Confidence 58999997 999999999999999999999998765432211 1111 11233455678888889999988765
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.014 Score=46.48 Aligned_cols=107 Identities=11% Similarity=0.095 Sum_probs=68.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
+++.|.| .|.||+.+++.|..-|++|++++|++.... .....+ .+++++++++|+++++++..+-+
T Consensus 149 ktvgIiG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~~~~--------~~l~ell~~aDvV~l~~Plt~~t-- 214 (343)
T 2yq5_A 149 LTVGLIG-VGHIGSAVAEIFSAMGAKVIAYDVAYNPEF---EPFLTY--------TDFDTVLKEADIVSLHTPLFPST-- 214 (343)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCGGG---TTTCEE--------CCHHHHHHHCSEEEECCCCCTTT--
T ss_pred CeEEEEe-cCHHHHHHHHHHhhCCCEEEEECCChhhhh---hccccc--------cCHHHHHhcCCEEEEcCCCCHHH--
Confidence 5899999 599999999999999999999999875421 111111 25778889999988888742210
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
. .+.+. ...+.+..-.++|+++... +.-...+++++++..+
T Consensus 215 -------~-----~li~~-~~l~~mk~gailIN~aRg~---------~vd~~aL~~aL~~g~i 255 (343)
T 2yq5_A 215 -------E-----NMIGE-KQLKEMKKSAYLINCARGE---------LVDTGALIKALQDGEI 255 (343)
T ss_dssp -------T-----TCBCH-HHHHHSCTTCEEEECSCGG---------GBCHHHHHHHHHHTSS
T ss_pred -------H-----HHhhH-HHHhhCCCCcEEEECCCCh---------hhhHHHHHHHHHcCCC
Confidence 0 11122 2334444444555554332 3336778888877654
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00038 Score=55.72 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=32.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
.+++|+||+|.+|..++..+...|.+|+++++++++.
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~ 201 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS 201 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 4799999999999999999988899999999875443
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0006 Score=52.43 Aligned_cols=38 Identities=45% Similarity=0.481 Sum_probs=33.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
|+|.|+|+ |.+|..++..|.+.|++|++++|+++....
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~ 38 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS 38 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceee
Confidence 47999996 999999999999999999999999876543
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0006 Score=53.98 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=31.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|+|+ |.+|..++..+...|.+|++++|++++.+
T Consensus 166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 202 (339)
T 1rjw_A 166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE 202 (339)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 47999999 77999999998888999999998765443
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00021 Score=54.11 Aligned_cols=66 Identities=14% Similarity=0.203 Sum_probs=47.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC----cEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL----EVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~----~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..+++.|.+.|+ +|++++|++++...+.. .++.. ..+..++++++|.++.++.
T Consensus 2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT-------TTDNNEVAKNADILILSIK 72 (247)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE-------CSCHHHHHHHCSEEEECSC
T ss_pred CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE-------eCChHHHHHhCCEEEEEeC
Confidence 46899999 59999999999999998 99999998766544321 12221 1234456677888887773
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00061 Score=54.04 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=32.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
.+|+|+|++|.+|..++..+...|.+|+++++++++.
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~ 197 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT 197 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 4799999999999999999988899999999876554
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00045 Score=55.08 Aligned_cols=72 Identities=17% Similarity=0.149 Sum_probs=47.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhH---HHHhhh--cCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLAD---VKKAIE--GKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~--~~~~~~~~~~ 74 (189)
++++|+|++|.+|..+++.+...|.+|++++|++++.+.....+.. ...|..+.+. +.+... ++|.++.+++
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G 248 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH-EVFNHREVNYIDKIKKYVGEKGIDIIIEMLA 248 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC-EEEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence 4799999999999999999999999999999886654422211222 1234444332 333332 4677666554
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0037 Score=49.54 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=29.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~ 35 (189)
++||.|+|+ |.+|..++..|+..|. ++.++++++
T Consensus 19 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 19 QNKITVVGV-GAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 368999997 9999999999999886 788888764
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0033 Score=51.00 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=51.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
++|+|+|+ |.+|+.+++.+.+.|++|++++ .+.............+..|..|.+.+.+..+.+|.+.
T Consensus 25 ~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~ 91 (403)
T 3k5i_A 25 RKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVT 91 (403)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEE
Confidence 58999996 9999999999999999999999 6544432221222456788899999999998887654
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00079 Score=52.96 Aligned_cols=73 Identities=18% Similarity=0.189 Sum_probs=51.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCC---CCCcccC-----CceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQ---RLPSEYH-----SKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~---~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
++++|+|+ |.+|+.++..|.+.|. +|++..|+++ +...+.. ....+...+..+.+.+...++++|.+|.+
T Consensus 149 k~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINa 227 (312)
T 3t4e_A 149 KTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNG 227 (312)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEEC
Confidence 58999996 9999999999999998 8999999943 3332211 11223333444444456778889999988
Q ss_pred ccc
Q psy3626 73 TLL 75 (189)
Q Consensus 73 ~~~ 75 (189)
+++
T Consensus 228 Tp~ 230 (312)
T 3t4e_A 228 TKV 230 (312)
T ss_dssp SST
T ss_pred CcC
Confidence 876
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0016 Score=45.07 Aligned_cols=31 Identities=26% Similarity=0.255 Sum_probs=26.4
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEEe
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTLL 32 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~~ 32 (189)
++|+|.|++ |..|..+++.|.+.|++|+.+.
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vn 47 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVN 47 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeC
Confidence 589999998 8899999999999999855543
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0081 Score=48.38 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=23.9
Q ss_pred ceEEEEcCCChhhHHHHH-HHHHcC---CcEEEEe
Q psy3626 2 KKIAIFGATGMTGLCSLE-AALKQG---LEVCTLL 32 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~-~L~~~g---~~v~~~~ 32 (189)
++|.|.||||++|+.+++ .|.++. .++..+.
T Consensus 5 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 39 (377)
T 3uw3_A 5 MNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFS 39 (377)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEe
Confidence 589999999999999999 555555 3455544
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0088 Score=45.40 Aligned_cols=118 Identities=14% Similarity=0.110 Sum_probs=69.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++|+|.|+ |.+|+.++..|...|. ++++++++.-....+.+. .-+...|+-. .+.+++.+....+
T Consensus 29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq-~l~~~~diG~~Ka~~~~~~l~~~np---------- 96 (251)
T 1zud_1 29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQ-ILFTTEDIDRPKSQVSQQRLTQLNP---------- 96 (251)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTC-TTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCC-ccCChhhCCCHHHHHHHHHHHHHCC----------
Confidence 48999996 8899999999999986 778888775544443221 1122334422 3344444443211
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.-++..+...+ +.+.+.+.+.+.|+||.+... ...-..+-+.|.+.+. .+|..
T Consensus 97 -------~~~v~~~~~~~-~~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~-p~i~~ 149 (251)
T 1zud_1 97 -------DIQLTALQQRL-TGEALKDAVARADVVLDCTDN----------MATRQEINAACVALNT-PLITA 149 (251)
T ss_dssp -------TSEEEEECSCC-CHHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTC-CEEEE
T ss_pred -------CCEEEEEeccC-CHHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCC-CEEEE
Confidence 01233333333 345667778889999987532 2333456667777764 35543
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0029 Score=50.37 Aligned_cols=25 Identities=28% Similarity=0.314 Sum_probs=22.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL 26 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~ 26 (189)
++|.|.|+||++|..+++.|.++.+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~f 26 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDF 26 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC
Confidence 5899999999999999999888754
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.004 Score=49.26 Aligned_cols=109 Identities=17% Similarity=0.172 Sum_probs=64.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++||.|+|+ |.+|..++..|+..|. ++.+++++++.+.. ...|+.+... +
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g--------~a~DL~~~~~----~--------------- 72 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKG--------EMMDLEHGSL----F--------------- 72 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHH--------HHHHHHHHGG----G---------------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHH--------HHHHhhhhhh----c---------------
Confidence 368999998 9999999999999886 78888876433221 0111111100 0
Q ss_pred CCCCccccCceeEE-eccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccE-EEEec
Q psy3626 79 QRLPSEYHSKVEII-QGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSV-VSVCL 151 (189)
Q Consensus 79 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~-~i~iS 151 (189)
....++. ..|+ +.+.++|++|.++|....... ...|....+.+.+.+.+.+... ++.+|
T Consensus 73 -------~~~~~i~~t~d~-------~~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 73 -------LHTAKIVSGKDY-------SVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp -------SCCSEEEEESSS-------CSCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred -------ccCCeEEEcCCH-------HHhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 0011111 2232 126678999999887654321 2355666777888887776444 44443
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0011 Score=50.61 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=50.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++|+|+ |..|++++..|.+.|. +|++..|++++...+... ... ...+++.+.++++|.+|.+++.
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~-~~~-----~~~~~~~~~~~~aDiVInatp~ 176 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP-VKI-----FSLDQLDEVVKKAKSLFNTTSV 176 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS-CEE-----EEGGGHHHHHHTCSEEEECSST
T ss_pred eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH-ccc-----CCHHHHHhhhcCCCEEEECCCC
Confidence 6899996 9999999999999998 899999998766554322 111 1234566778899999988764
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0038 Score=49.18 Aligned_cols=75 Identities=13% Similarity=-0.028 Sum_probs=52.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC----cccCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP----SEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
++++|+|++.-+|+.+++.|+..|.+|+++.|+..... .+............++++++.+.+.++|++|.+++..
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p 256 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSE 256 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCCCC
Confidence 58999998667899999999999999999988733222 1111000011111134578999999999999888863
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00069 Score=52.83 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=49.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+|+ |.+|+.+++.|...|.+|++++|++++.......+...+ +..++++.++++|.++.+++
T Consensus 158 ~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 158 SQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPF-----HTDELKEHVKDIDICINTIP 224 (300)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEE-----EGGGHHHHSTTCSEEEECCS
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEE-----chhhHHHHhhCCCEEEECCC
Confidence 58999995 999999999999999999999998654332111122221 23467778899999888776
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0068 Score=45.89 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=27.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEE-EecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCT-LLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~-~~r~~ 35 (189)
|+||.|+|+ |.+|+.+++.+.+++.++.. ++|++
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~ 37 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP 37 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence 689999998 99999999999988667665 45544
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0065 Score=47.04 Aligned_cols=65 Identities=15% Similarity=0.299 Sum_probs=46.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
++++|+|+ |..|+.++..|.+.|. +|+++.|++++...+... +... ..+++.. + ++|.+|.++++
T Consensus 123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~-~~~~-----~~~~l~~-l-~~DivInaTp~ 188 (282)
T 3fbt_A 123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE-FKVI-----SYDELSN-L-KGDVIINCTPK 188 (282)
T ss_dssp SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT-SEEE-----EHHHHTT-C-CCSEEEECSST
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh-cCcc-----cHHHHHh-c-cCCEEEECCcc
Confidence 58999996 8999999999999998 899999997765544321 1111 2233333 4 78888877765
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0026 Score=50.36 Aligned_cols=27 Identities=26% Similarity=0.410 Sum_probs=23.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcE
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEV 28 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v 28 (189)
|||.|.||+|.+|+.+++.|.++++.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~ 27 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPL 27 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc
Confidence 479999999999999999999776543
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0013 Score=51.86 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=29.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~ 35 (189)
++|.|+|+ |.+|..++..|...|+ +|+++++++
T Consensus 9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 48999996 9999999999999999 999999873
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0035 Score=49.50 Aligned_cols=64 Identities=19% Similarity=0.245 Sum_probs=50.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.+|+.+++.|...|++|++++|++...... . ......+++++++++|+++++++.
T Consensus 141 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~-------~~~~~~~l~ell~~aDvV~l~lPl 204 (324)
T 3hg7_A 141 RTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--D-------QVYQLPALNKMLAQADVIVSVLPA 204 (324)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--S-------EEECGGGHHHHHHTCSEEEECCCC
T ss_pred ceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--h-------cccccCCHHHHHhhCCEEEEeCCC
Confidence 5899999 59999999999999999999999987443321 0 012346788899999999888875
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00041 Score=54.94 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=33.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|+|++|.+|..+++.+...|.+|++++|++++.+
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~ 194 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVD 194 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 47999999999999999999889999999999866544
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0035 Score=49.24 Aligned_cols=37 Identities=24% Similarity=0.190 Sum_probs=32.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
|+|.|+|+ |.+|..++..|++.|+ +|++++++++.+.
T Consensus 5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~ 42 (317)
T 2ewd_A 5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQ 42 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHH
Confidence 58999997 9999999999999998 9999999865443
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.005 Score=48.38 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=29.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~ 36 (189)
|+||.|+|+ |.+|..++..|...+. +|.+++++++
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~ 42 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANES 42 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcc
Confidence 368999998 9999999999988764 7888888753
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00013 Score=58.38 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=31.7
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
+|.|+|+ |.+|..++..|.+.|++|++++|+++..
T Consensus 17 kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~~~~~ 51 (366)
T 1evy_A 17 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEV 51 (366)
T ss_dssp EEEEECC-SHHHHHHHHHHTTTEEEEEEECSCHHHH
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 8999995 9999999999999999999999986543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00081 Score=52.30 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=49.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
++++|+| .|.+|+.+++.|...|.+|++++|++++.......+...+ +.+++.+.++++|.++.+++
T Consensus 156 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 156 ANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred CEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEEECCC
Confidence 5899999 5999999999999999999999998654322111122221 23467778899999887774
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00071 Score=53.29 Aligned_cols=66 Identities=14% Similarity=0.165 Sum_probs=45.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC----CcEEEEecCCC--CCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG----LEVCTLLRDPQ--RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g----~~v~~~~r~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+|+ |.+|..++..|.+.| ++|+++.|+++ ..+.+...++.+. .+...+++++|.|+.++.
T Consensus 22 ~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~-------~~~~e~~~~aDvVilav~ 93 (322)
T 2izz_A 22 SMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLT-------PHNKETVQHSDVLFLAVK 93 (322)
T ss_dssp CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEE-------SCHHHHHHHCSEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEe-------CChHHHhccCCEEEEEeC
Confidence 368999995 999999999999999 89999999875 3333221222211 123345667887777664
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0089 Score=47.61 Aligned_cols=64 Identities=17% Similarity=0.141 Sum_probs=48.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|++.|.| .|.||+.+++.|..-|++|++++|++....... ...+ .++++++++++|.++++++.
T Consensus 174 ktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~-------~~~l~ell~~sDvV~l~~Pl 237 (345)
T 4g2n_A 174 RRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIY-------HDTLDSLLGASDIFLIAAPG 237 (345)
T ss_dssp CEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEE-------CSSHHHHHHTCSEEEECSCC
T ss_pred CEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeE-------eCCHHHHHhhCCEEEEecCC
Confidence 5899999 599999999999988999999999864332111 1111 14677889999998888764
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0079 Score=47.51 Aligned_cols=37 Identities=27% Similarity=0.180 Sum_probs=32.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
+||.|+|+ |.+|..++..|...|+ +|.+++++++.++
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~ 52 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQ 52 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHH
Confidence 48999997 9999999999999998 9999999875544
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0088 Score=47.77 Aligned_cols=117 Identities=18% Similarity=0.138 Sum_probs=71.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|..++..|...|. ++++++++.-..+.+.+. .-+-..|+-. .+.+++.+....+
T Consensus 119 ~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq-~l~~~~diG~~Ka~~~~~~l~~~np---------- 186 (353)
T 3h5n_A 119 AKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQ-VLFSEDDVGKNKTEVIKRELLKRNS---------- 186 (353)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTC-TTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccc-cCCChHHCCChHHHHHHHHHHHHCC----------
Confidence 47999996 9999999999999986 788888876555544322 1122334432 3344444444321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHH-HHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMK-NIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~-~ll~~~~~~~~~~~i~ 149 (189)
.-++..+..++....++.. +.+.|+||.+... ...++ .+-++|.+.+.. +|+
T Consensus 187 -------~v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn----------~~~~r~~ln~~c~~~~~p-~i~ 239 (353)
T 3h5n_A 187 -------EISVSEIALNINDYTDLHK-VPEADIWVVSADH----------PFNLINWVNKYCVRANQP-YIN 239 (353)
T ss_dssp -------TSEEEEEECCCCSGGGGGG-SCCCSEEEECCCC----------STTHHHHHHHHHHHTTCC-EEE
T ss_pred -------CCeEEEeecccCchhhhhH-hccCCEEEEecCC----------hHHHHHHHHHHHHHhCCC-EEE
Confidence 1145556666655544555 8899999987522 22133 455778888753 443
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00027 Score=56.82 Aligned_cols=35 Identities=26% Similarity=0.205 Sum_probs=32.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-------CcEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-------LEVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-------~~v~~~~r~~~ 36 (189)
||+|.|+|+ |.+|..++..|.+.| ++|++++|+++
T Consensus 21 ~~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGS-GNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECC-SHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 578999995 999999999999999 99999999876
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0044 Score=48.07 Aligned_cols=33 Identities=24% Similarity=0.503 Sum_probs=27.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLR 33 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r 33 (189)
|+||.|.|++|.+|+.+++.+.+. +.++.+...
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd 54 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLV 54 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBC
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 358999999999999999998865 778776643
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0008 Score=51.98 Aligned_cols=67 Identities=16% Similarity=0.094 Sum_probs=44.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCCCCCcccCCcee-EEeccccChhHHHHhhhcCcceeeecc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQRLPSEYHSKVE-IIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
||+|.|+| .|.+|..++..|.+. +++|++++|+++........+.. ... .+...+++++|.++.++.
T Consensus 6 ~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~------~~~~~~~~~aDvVilavp 75 (290)
T 3b1f_A 6 EKTIYIAG-LGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEAT------ADFKVFAALADVIILAVP 75 (290)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEE------SCTTTTGGGCSEEEECSC
T ss_pred cceEEEEe-eCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCccccc------CCHHHhhcCCCEEEEcCC
Confidence 47999999 699999999999988 67899999886544332111111 111 122334567888777765
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.011 Score=47.00 Aligned_cols=117 Identities=13% Similarity=0.061 Sum_probs=69.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|.++++.|...|. ++++++++.-..+.+.+.. -+-..|+-. .+.+++.+....+
T Consensus 35 ~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~-l~~~~diG~~Ka~aaa~~L~~inP---------- 102 (340)
T 3rui_A 35 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQA-LYNFEDCGKPKAELAAASLKRIFP---------- 102 (340)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTST-TCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccc-cCChhhcChHHHHHHHHHHHHhCC----------
Confidence 48999996 9999999999999986 7888888765555543221 122234432 3445555544321
Q ss_pred CCCCccccCceeEEeccc--------------cCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 79 QRLPSEYHSKVEIIQGDV--------------LKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
.-++..+..++ .+.+.+.+.+.+.|+|+.+.-.. ..-..+-++|.+.+.
T Consensus 103 -------~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~----------~tR~lin~~c~~~~~ 165 (340)
T 3rui_A 103 -------LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR----------ESRWLPSLLSNIENK 165 (340)
T ss_dssp -------TCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSST----------GGGHHHHHHHHHTTC
T ss_pred -------CCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCH----------HHHHHHHHHHHHcCC
Confidence 01233333222 13455677888999999985332 222335567777764
Q ss_pred cEEE
Q psy3626 145 SVVS 148 (189)
Q Consensus 145 ~~~i 148 (189)
.+|
T Consensus 166 -plI 168 (340)
T 3rui_A 166 -TVI 168 (340)
T ss_dssp -EEE
T ss_pred -cEE
Confidence 344
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0011 Score=53.39 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=53.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccc------------------cChhHHHHhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDV------------------LKLADVKKAI 63 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~------------------~~~~~~~~~~ 63 (189)
.+++|+|+ |-+|...++.+...|.+|++++|++.+.+....-+.+++..+. .+.+.+++.+
T Consensus 185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l 263 (381)
T 3p2y_A 185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI 263 (381)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence 48999996 9999999999999999999999998765543223334433221 2346788999
Q ss_pred hcCcceeeec
Q psy3626 64 EGKDGLEVCT 73 (189)
Q Consensus 64 ~~~~~~~~~~ 73 (189)
+++|++|.++
T Consensus 264 ~~aDIVI~tv 273 (381)
T 3p2y_A 264 TKFDIVITTA 273 (381)
T ss_dssp TTCSEEEECC
T ss_pred hcCCEEEECC
Confidence 9999998665
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0077 Score=47.15 Aligned_cols=64 Identities=19% Similarity=0.240 Sum_probs=47.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.+|+.+++.|...|++|++++|+++. ......++.. .+++++++++|.++++++.
T Consensus 143 ~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~--------~~l~ell~~aDvV~l~~p~ 206 (307)
T 1wwk_A 143 KTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF--------VDLETLLKESDVVTIHVPL 206 (307)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE--------CCHHHHHHHCSEEEECCCC
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc--------cCHHHHHhhCCEEEEecCC
Confidence 5899999 5999999999999999999999998754 2111112221 1456778899998877764
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.002 Score=51.15 Aligned_cols=38 Identities=11% Similarity=0.152 Sum_probs=32.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|+||+|.+|...+..+...|.+|+++++++++.+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~ 203 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA 203 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 47899999999999999888888999999998765543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 189 | ||||
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 9e-14 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 3e-08 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 1e-05 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-05 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-04 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 0.001 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 0.002 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 0.002 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 0.003 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 0.003 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 0.003 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.004 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.7 bits (156), Expect = 9e-14
Identities = 84/187 (44%), Positives = 103/187 (55%), Gaps = 43/187 (22%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVK 60
+KKIAIFGATG TGL +L A++
Sbjct: 3 VKKIAIFGATGQTGLTTLAQAVQA------------------------------------ 26
Query: 61 KAIEGKDGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120
G EV L+RD RLPSE ++ GDVL+ ADV K + G+D V+V LGTRN
Sbjct: 27 -------GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 79
Query: 121 DLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVL 180
DLSPTTVMSEG +NIV AMK + V V C SAFL ++P+KVPP V DDH RM+ VL
Sbjct: 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL 139
Query: 181 KDSGLNY 187
++SGL Y
Sbjct: 140 RESGLKY 146
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 50.0 bits (118), Expect = 3e-08
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY---HSKVEIIQGDVLKLAD 58
K IA+ GATG G + A G V + + L +E V + QG +L
Sbjct: 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVP 63
Query: 59 VKKAI 63
+ +
Sbjct: 64 LMDTL 68
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 42.5 bits (98), Expect = 1e-05
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP---------QRLPSEYHSKVEIIQGD 52
+I + GATG G +A+L G L+R+ Q L S S I+ G
Sbjct: 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63
Query: 53 V 53
+
Sbjct: 64 I 64
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 42.1 bits (97), Expect = 2e-05
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP--------QRLPSEYHSKVEIIQGDV 53
++ I G TG G + A++ G L R Q L ++I+ +
Sbjct: 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63
Query: 54 LKLADVKKAIEGKDGLEVCT 73
+ A++ D +
Sbjct: 64 DDHQRLVDALKQVDVVISAL 83
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.4 bits (88), Expect = 3e-04
Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 7/69 (10%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD-------PQRLPSEYHSKVEIIQGDV 53
K I + G G G + +V + D L + +VE++ GD+
Sbjct: 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDI 61
Query: 54 LKLADVKKA 62
V K
Sbjct: 62 ADAELVDKL 70
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.7 bits (83), Expect = 0.001
Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLE--VCTLLRDPQRLPSEYHSKVEIIQG 51
+ + + GA+G TG + + + L+R Q + + ++ G
Sbjct: 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KIGGEADVFIG 54
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 35.4 bits (81), Expect = 0.002
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP---SEYHSKVEIIQGDVLKLAD 58
+ + I G G ++ + +G +V L + +RL +++ V I GDV L D
Sbjct: 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLED 65
Query: 59 VKKAIE 64
K+A
Sbjct: 66 QKQAAS 71
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 35.6 bits (80), Expect = 0.002
Identities = 15/91 (16%), Positives = 26/91 (28%), Gaps = 5/91 (5%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-----EYHSKVEIIQGDVLK 55
K++ + G TG G G V +PS ++ GD+
Sbjct: 8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD 67
Query: 56 LADVKKAIEGKDGLEVCTLLRDPQRLPSEYH 86
+ ++I V + P S
Sbjct: 68 QNKLLESIREFQPEIVFHMAAQPLVRLSYSE 98
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 35.1 bits (80), Expect = 0.003
Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 7/70 (10%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP-------QRLPSEYHSKVEIIQGDVL 54
K I + G GL A G V + R +++ E+ K + Q DV
Sbjct: 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS 69
Query: 55 KLADVKKAIE 64
V K I+
Sbjct: 70 NTDIVTKTIQ 79
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 35.2 bits (79), Expect = 0.003
Identities = 10/55 (18%), Positives = 17/55 (30%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKL 56
+ + GA G +E L+ G +V R +L + G
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 34.7 bits (78), Expect = 0.003
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH 43
K++ + GATG+TG L+ L + + + L
Sbjct: 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR 44
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.7 bits (78), Expect = 0.004
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQ 50
K + I GA+G TG L+ L+QGL +V + R E + V
Sbjct: 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEV 65
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 189 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.95 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.84 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.82 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.81 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.79 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.79 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.78 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.76 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.75 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.75 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.74 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.74 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.73 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.71 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.71 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.71 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.71 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.7 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.7 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.7 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.68 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.67 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.67 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.67 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.67 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.67 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.67 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.67 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.66 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.66 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.66 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.66 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.65 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.65 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.65 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.64 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.63 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.63 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.63 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.63 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.63 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.62 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.62 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.62 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.62 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.62 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.61 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.61 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.61 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.61 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.6 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.6 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.6 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.58 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.58 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.58 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.58 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.57 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.57 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.56 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.56 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.55 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.54 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.53 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.53 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.53 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.52 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.51 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.51 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.51 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.49 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.48 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.48 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.47 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.46 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.45 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.44 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.44 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.44 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.41 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.39 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.37 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.37 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.36 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.31 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.28 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.25 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.19 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.08 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.08 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.08 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.06 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.93 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.92 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.9 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.78 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.69 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.67 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.58 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.45 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.22 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.21 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.18 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.17 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.15 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.12 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 98.11 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 98.1 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 98.07 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.05 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 98.02 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 98.01 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.96 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.9 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.89 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.83 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.8 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.8 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.79 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.77 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.75 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.71 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.7 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.69 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.68 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.64 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.64 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.62 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.61 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.61 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.61 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.59 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.57 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.56 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.55 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 97.55 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.53 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.52 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.52 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.44 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.42 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.4 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.37 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.31 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.3 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.29 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.27 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 97.24 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.23 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.21 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.2 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.19 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.19 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.19 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.17 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.16 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.12 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 97.09 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 97.08 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 97.06 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.04 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.04 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.03 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 97.02 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.98 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 96.87 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 96.86 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.84 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.84 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.83 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.75 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.75 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.72 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.7 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.67 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 96.65 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.65 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.64 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.58 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.58 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.57 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.56 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.56 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.51 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.49 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.44 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.44 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 96.44 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.41 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 96.4 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 96.39 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.37 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.35 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.34 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.29 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.26 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.25 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.25 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 96.2 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.2 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.19 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.18 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.17 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.11 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.06 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.98 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.98 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 95.94 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 95.94 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.92 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.92 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.91 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.89 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 95.89 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.84 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 95.8 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.8 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.78 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 95.78 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 95.77 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 95.72 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.65 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 95.64 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.64 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.64 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 95.6 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 95.54 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.53 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.5 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 95.32 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.2 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.17 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 95.13 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.07 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.05 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 94.96 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 94.9 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.9 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 94.8 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.79 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.77 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 94.76 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.75 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 94.63 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 94.52 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.47 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 94.41 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 94.34 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 94.32 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.32 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 94.32 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.27 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 94.16 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 94.07 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 94.0 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 93.93 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.88 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 93.83 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 93.72 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 93.71 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 93.59 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 93.58 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 93.47 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 93.43 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 93.39 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 93.37 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 93.3 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 93.23 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 93.2 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 93.19 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 93.1 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 93.06 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 93.05 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 92.87 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 92.79 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 92.77 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 92.39 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 92.36 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 92.15 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 92.13 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 92.02 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 91.95 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 91.6 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 91.57 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 91.49 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 91.45 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 91.41 | |
| d2afhe1 | 289 | Nitrogenase iron protein {Azotobacter vinelandii [ | 91.39 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 91.35 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 91.14 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 90.62 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 90.61 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 90.33 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 90.2 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 89.97 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 89.89 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 89.81 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 89.76 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 89.46 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 89.39 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 89.2 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 89.18 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.91 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 88.89 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 88.84 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 88.74 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 88.13 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 87.95 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 87.81 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 87.79 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 87.76 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.71 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 87.56 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 87.53 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 87.38 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 87.36 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 87.29 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 87.09 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 87.05 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 86.87 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 86.69 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 86.66 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 86.43 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 86.37 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 86.35 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 86.34 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 86.22 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 86.18 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 85.91 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 85.52 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 85.14 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 84.95 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 84.33 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 84.09 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 83.94 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 83.65 | |
| d1ihua1 | 296 | Arsenite-translocating ATPase ArsA {Escherichia co | 83.18 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 82.71 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 82.18 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 82.13 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.02 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 81.99 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 81.74 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 81.73 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 81.68 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 81.46 | |
| d1pj3a1 | 294 | Mitochondrial NAD(P)-dependent malic enzyme {Human | 81.07 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 81.0 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 80.68 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 80.32 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.3e-27 Score=177.36 Aligned_cols=146 Identities=58% Similarity=0.909 Sum_probs=121.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||||+||||||++|++++++|+++|++|+++.|++++.......+++++.
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~------------------------------ 52 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVV------------------------------ 52 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEE------------------------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccccccc------------------------------
Confidence 78999999999999999999999999999999998876654434444444
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPS 160 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~ 160 (189)
+|+.+++++.+++.++|++|+++|...+..+..++..+++++++++++++++|||++||...+.+.+
T Consensus 53 -------------gD~~d~~~l~~al~~~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~ 119 (205)
T d1hdoa_ 53 -------------GDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT 119 (205)
T ss_dssp -------------SCTTSHHHHHHHHTTCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT
T ss_pred -------------ccccchhhHHHHhcCCCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCc
Confidence 4555555555666666888888887666666778899999999999999999999999998888777
Q ss_pred CCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 161 KVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
..+..+..++.++...|+++++++++||+
T Consensus 120 ~~~~~~~~~~~~~~~~e~~l~~~~~~~ti 148 (205)
T d1hdoa_ 120 KVPPRLQAVTDDHIRMHKVLRESGLKYVA 148 (205)
T ss_dssp CSCGGGHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cccccccccchHHHHHHHHHHhcCCceEE
Confidence 77777778888999999999999999985
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=1.4e-20 Score=149.76 Aligned_cols=155 Identities=17% Similarity=0.168 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++|||||||||++|+++|+++|++|++++|.++..... ++. .... .
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~---~~~-------------~~~~----------------~ 49 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTE---RVD-------------HIYQ----------------D 49 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------------------------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchh---hHH-------------HHHh----------------h
Confidence 6789999999999999999999999999999975432110 000 0000 0
Q ss_pred CccccCceeEEeccccCHHHHHHHhcC--CCEEEEeeccCCCCC-------CcceehhhHHHHHHHHHHCCc---cEEEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEG--KDGVVVALGTRNDLS-------PTTVMSEGMKNIVTAMKEYNV---SVVSV 149 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~vv~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~~---~~~i~ 149 (189)
+....+++..+.+|+.|.+++.+.+.+ +|+++|+++...... ..++|+.|+.+++++|++.++ .|||+
T Consensus 50 ~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~ 129 (357)
T d1db3a_ 50 PHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQ 129 (357)
T ss_dssp -----CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEE
T ss_pred hhhcCCCeEEEEeecCCHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 001122455555555555555555553 488888887644321 235799999999999998754 48999
Q ss_pred eccceeecCCCCC-------CCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 150 CLSAFLFYEPSKV-------PPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 150 iSS~~~~~~~~~~-------p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
+||+.+|+..... +.+..+|..+|..+|++++. .+++++
T Consensus 130 ~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ 179 (357)
T d1db3a_ 130 ASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC 179 (357)
T ss_dssp EEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999887643322 24466788899999887763 356554
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=2.3e-20 Score=147.37 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=99.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-------ccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|||+||||+||||++|++.|+++|++|++++|....... ....+++++++|++|.+.+.++++..
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-------- 72 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-------- 72 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT--------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc--------
Confidence 569999999999999999999999999999875433221 11234555555555555555544421
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVV 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~ 147 (189)
++|+|||+|+..... ...++|+.|+.+++++|++.+++++
T Consensus 73 ---------------------------------~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~ 119 (338)
T d1udca_ 73 ---------------------------------AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119 (338)
T ss_dssp ---------------------------------TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ---------------------------------CCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEE
Confidence 467788877654311 2246899999999999999999999
Q ss_pred EEeccceeecCCCCC--------CCCCccchhhHHHHHHHhh
Q psy3626 148 SVCLSAFLFYEPSKV--------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 148 i~iSS~~~~~~~~~~--------p~~~~~~~~~~~~~~~~l~ 181 (189)
|++||..++...+.. ..+..+|...|...|+.+.
T Consensus 120 i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~ 161 (338)
T d1udca_ 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILT 161 (338)
T ss_dssp EEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred EecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHH
Confidence 999999887653321 1345667788888888776
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=7.5e-20 Score=137.46 Aligned_cols=138 Identities=22% Similarity=0.149 Sum_probs=102.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+|+|||||||+|++++++|+++|+ +|++++|++.........++....+|+.+.+++.+.++
T Consensus 15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~--------------- 79 (232)
T d2bkaa1 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ--------------- 79 (232)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS---------------
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccc---------------
Confidence 5799999999999999999999984 89999998766554444555555566655555554444
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----CCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
++|++++++|..... ....+++.++.+++++|++.++++||++||...
T Consensus 80 ----------------------------~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~ 131 (232)
T d2bkaa1 80 ----------------------------GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA 131 (232)
T ss_dssp ----------------------------SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred ----------------------------ccccccccccccccccchhhhhhhcccccceeeecccccCccccccCCcccc
Confidence 456666666543211 123568889999999999999999999999876
Q ss_pred ecCCCCCCCCCccchhhHHHHHHHhhhcCCC-CC
Q psy3626 156 FYEPSKVPPMFHNVNDDHQRMYNVLKDSGLN-YI 188 (189)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~-~t 188 (189)
... ....|...|..+|+.+.+.+.+ ||
T Consensus 132 ~~~------~~~~Y~~~K~~~E~~l~~~~~~~~~ 159 (232)
T d2bkaa1 132 DKS------SNFLYLQVKGEVEAKVEELKFDRYS 159 (232)
T ss_dssp CTT------CSSHHHHHHHHHHHHHHTTCCSEEE
T ss_pred ccC------ccchhHHHHHHhhhccccccccceE
Confidence 542 2234788899999999988875 55
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=2.1e-19 Score=141.76 Aligned_cols=139 Identities=15% Similarity=0.142 Sum_probs=97.2
Q ss_pred ceE-EEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-----c-------cCCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKI-AIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-----E-------YHSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i-~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-----~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
||| +||||+||||++++++|+++||+|++++|.++.... + ...+++++.+|+++++.+..++.+.+
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~- 79 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK- 79 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC-
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc-
Confidence 678 999999999999999999999999999997654321 1 11345566666666666555554443
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~ 141 (189)
.++++++++..... ...++|+.++.++++++++
T Consensus 80 ----------------------------------------~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~ 119 (347)
T d1t2aa_ 80 ----------------------------------------PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKT 119 (347)
T ss_dssp ----------------------------------------CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----------------------------------------cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHH
Confidence 34555555543211 1135789999999999998
Q ss_pred CCc---cEEEEeccceeecCCCCC-------CCCCccchhhHHHHHHHhh
Q psy3626 142 YNV---SVVSVCLSAFLFYEPSKV-------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~---~~~i~iSS~~~~~~~~~~-------p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. ++||++||+.+|++.+.. +.+..+|..+|..+|+++.
T Consensus 120 ~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~ 169 (347)
T d1t2aa_ 120 CGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV 169 (347)
T ss_dssp TTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred cCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 764 489999999887653322 2334568888999998875
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.79 E-value=3.9e-19 Score=141.27 Aligned_cols=144 Identities=17% Similarity=0.058 Sum_probs=100.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+||||+||||++|+++|+++|++|++++|..............+..+|+.+.+.+.+
T Consensus 16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-------------------- 75 (363)
T d2c5aa1 16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-------------------- 75 (363)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHH--------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHH--------------------
Confidence 689999999999999999999999999999876544332222334455555555555444
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----C----CcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----S----PTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~----~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
.++++|.|+|+++..... . ....|+.++.++++++++.++++||++||+
T Consensus 76 -----------------------~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~ 132 (363)
T d2c5aa1 76 -----------------------VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 132 (363)
T ss_dssp -----------------------HHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred -----------------------HhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCcccccccccc
Confidence 444556666665543321 1 134689999999999999999999999999
Q ss_pred eeecCCCCCC--------------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSKVP--------------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~~p--------------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
..++.....+ .+..+|..+|..+|++++ +.+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ 185 (363)
T d2c5aa1 133 CIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECR 185 (363)
T ss_dssp GGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred ccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 8876432211 234567888888888776 2356554
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=3.4e-19 Score=140.94 Aligned_cols=139 Identities=14% Similarity=0.140 Sum_probs=99.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-------ccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|.|+|||||||||++++++|+++|++|+++++....... ....+++++.+|+.+++.++++++..
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-------- 73 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-------- 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS--------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc--------
Confidence 579999999999999999999999999999764322211 11234555555555555555544422
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEE
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVV 147 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~ 147 (189)
++|+|+|+|+..... ....+|+.++.+++++|++.+++++
T Consensus 74 ---------------------------------~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~ 120 (347)
T d1z45a2 74 ---------------------------------KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120 (347)
T ss_dssp ---------------------------------CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ---------------------------------CCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceE
Confidence 568888888765322 1234789999999999999999999
Q ss_pred EEeccceeecCCCCC-----------CCCCccchhhHHHHHHHhh
Q psy3626 148 SVCLSAFLFYEPSKV-----------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 148 i~iSS~~~~~~~~~~-----------p~~~~~~~~~~~~~~~~l~ 181 (189)
|++||..++++.+.. ..+..+|..+|...|++++
T Consensus 121 i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~ 165 (347)
T d1z45a2 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILN 165 (347)
T ss_dssp EEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred EeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHH
Confidence 999999888643211 1234568888998888775
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.76 E-value=2.1e-18 Score=135.92 Aligned_cols=156 Identities=20% Similarity=0.181 Sum_probs=109.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|+|||||||||||++|+++|+++|++|++++|....-.. +.+.+......
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--------------~~~~~~~~~~~--------------- 66 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQR--------------NLDEVRSLVSE--------------- 66 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH--------------HHHHHHHHSCH---------------
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchh--------------hHHHHHHhhhh---------------
Confidence 3689999999999999999999999999999974322110 00111111100
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
...++++.+.+|..|...........+.+++.++..... .....|+.|+.+++++|++.+++++|++||+
T Consensus 67 ---~~~~~~~~~~~d~~d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~ 143 (341)
T d1sb8a_ 67 ---KQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASS 143 (341)
T ss_dssp ---HHHTTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred ---cccCCeeEEeeccccccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccc
Confidence 012356677777777777777777778888776643311 2345899999999999999999999999999
Q ss_pred eeecCCCCC-------CCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSKV-------PPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~~-------p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.+++..+.. +.+...|..+|...|+++. ..+++++
T Consensus 144 ~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ 189 (341)
T d1sb8a_ 144 STYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTI 189 (341)
T ss_dssp GGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred eeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHhCCCeE
Confidence 988754332 2445677888888888776 3356665
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.75 E-value=1.8e-18 Score=137.70 Aligned_cols=146 Identities=12% Similarity=0.088 Sum_probs=97.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc------c-cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS------E-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~------~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|||+||||+||||++|+++|++.|+++++..++...... . ...+++++.+|+++++.+.++++..
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-------- 72 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-------- 72 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC--------
Confidence 489999999999999999999999986555443221111 1 1234555555555555554444332
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCC----
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYN---- 143 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~---- 143 (189)
++|+|+|+|+..... ...++|+.++.+++++|++.+
T Consensus 73 ---------------------------------~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~ 119 (361)
T d1kewa_ 73 ---------------------------------QPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119 (361)
T ss_dssp ---------------------------------CCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred ---------------------------------CCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 368888888754421 224689999999999998754
Q ss_pred -----ccEEEEeccceeecCCCCC-----------------CCCCccchhhHHHHHHHhhh----cCCCCC
Q psy3626 144 -----VSVVSVCLSAFLFYEPSKV-----------------PPMFHNVNDDHQRMYNVLKD----SGLNYI 188 (189)
Q Consensus 144 -----~~~~i~iSS~~~~~~~~~~-----------------p~~~~~~~~~~~~~~~~l~~----~~~~~t 188 (189)
.++||++||+.++++.... ..+...|..+|...|.++.. .+++++
T Consensus 120 ~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~ 190 (361)
T d1kewa_ 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTI 190 (361)
T ss_dssp HHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred hcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 4599999999888643211 12234577888888888763 466654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=4.5e-19 Score=138.58 Aligned_cols=144 Identities=13% Similarity=0.100 Sum_probs=95.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
.|||+||||+||+|++++++|+++|++|++++|..................|+.+.
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~------------------------ 56 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINH------------------------ 56 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEEC------------------------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEeh------------------------
Confidence 37999999999999999999999999999998743322211111111222222222
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
|. +...+.++|+|+|+|+..... ...++|+.++.+++++|++.++ ++|++||+
T Consensus 57 --------------~~-----~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~ 116 (312)
T d2b69a1 57 --------------DV-----VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTS 116 (312)
T ss_dssp --------------CT-----TSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEG
T ss_pred --------------HH-----HHHHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEECh
Confidence 22 122234578888888754321 1246899999999999999886 89999999
Q ss_pred eeecCCCCCC------------CCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSKVP------------PMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~~p------------~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.++++....| .+..+|..+|...|.+++ +.+++++
T Consensus 117 ~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 167 (312)
T d2b69a1 117 EVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVR 167 (312)
T ss_dssp GGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred heecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 8887532211 233457778888888875 3366664
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.74 E-value=2.7e-18 Score=135.60 Aligned_cols=144 Identities=14% Similarity=0.135 Sum_probs=95.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-------CcccCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-------PSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+|+|||||||||++++++|+++|++|.++.++.... ......+++++.+|+.+.+.+..+....
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~------- 74 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA------- 74 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC-------
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhh-------
Confidence 89999999999999999999999999877776642111 1112344555555555555555555544
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCC-------CCCcceehhhHHHHHHHHHHCCccE
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRND-------LSPTTVMSEGMKNIVTAMKEYNVSV 146 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~-------~~~~~~~~~~~~~ll~~~~~~~~~~ 146 (189)
+.+++.++.... ....++|+.++.+++++++..+ .+
T Consensus 75 ------------------------------------~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k 117 (346)
T d1oc2a_ 75 ------------------------------------DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IR 117 (346)
T ss_dssp ------------------------------------SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CE
T ss_pred ------------------------------------hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-cc
Confidence 555555443221 1223578999999999999988 47
Q ss_pred EEEeccceeecCCC-------------------CCCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 147 VSVCLSAFLFYEPS-------------------KVPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 147 ~i~iSS~~~~~~~~-------------------~~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
+|++||+..++..+ ....+...|..+|...|.+++ +.+++|+
T Consensus 118 ~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ 182 (346)
T d1oc2a_ 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKAT 182 (346)
T ss_dssp EEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred ccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 88888887765311 011223457788888888776 3466665
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.74 E-value=4.5e-18 Score=133.11 Aligned_cols=150 Identities=11% Similarity=0.090 Sum_probs=100.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec------CCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR------DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|||+|||||||||++++++|+++|+.|.+..| ....... ..+...
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~----------------~~~~~~------------- 51 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR----------------ANLAPV------------- 51 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG----------------GGGGGG-------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH----------------hHhhhh-------------
Confidence 58999999999999999999999987654332 1110000 000000
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEE
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVS 148 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i 148 (189)
+.+.++..+.+|..+...........|.++++++..... ...++|+.++.+++++|++.+++++|
T Consensus 52 --------~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I 123 (322)
T d1r6da_ 52 --------DADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVV 123 (322)
T ss_dssp --------TTCTTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEE
T ss_pred --------hcCCCeEEEEeccccchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEE
Confidence 012245555566656665666666677777777654321 12357999999999999999999999
Q ss_pred EeccceeecCCCCC-------CCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 149 VCLSAFLFYEPSKV-------PPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 149 ~iSS~~~~~~~~~~-------p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
++||+.+++..... ..+..+|..+|...|.+++ +.+++|+
T Consensus 124 ~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 174 (322)
T d1r6da_ 124 HVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVR 174 (322)
T ss_dssp EEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 99999888754322 2344567888888888776 3467765
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.3e-17 Score=131.50 Aligned_cols=139 Identities=14% Similarity=0.119 Sum_probs=95.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-------------ccCCceeEEeccccChhHHHHhhhcCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-------------EYHSKVEIIQGDVLKLADVKKAIEGKDG 68 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 68 (189)
|||+|||||||||++|+++|+++|++|++++|....... ....++.++.+|++|.+.+++.+...++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 479999999999999999999999999999864322211 0123455555565555555555544432
Q ss_pred eeeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHH
Q psy3626 69 LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~ 141 (189)
++++|+++..... ...+.|+.++.++++++++
T Consensus 83 -----------------------------------------~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~ 121 (346)
T d1ek6a_ 83 -----------------------------------------MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121 (346)
T ss_dssp -----------------------------------------EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhh
Confidence 3455665543311 1245789999999999999
Q ss_pred CCccEEEEeccceeecCCCC--------CCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSK--------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~--------~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++++|+++||+..++.... .+.+..+|..+|...|+.+.
T Consensus 122 ~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~ 169 (346)
T d1ek6a_ 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIR 169 (346)
T ss_dssp TTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHH
T ss_pred cCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHH
Confidence 99999999999887765321 12334567778888777665
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.71 E-value=1.2e-17 Score=130.50 Aligned_cols=115 Identities=21% Similarity=0.246 Sum_probs=81.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC--cc----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP--SE----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~--~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
||+|||||||||++++++|+++|++|+++++-..... .+ ...+++++.+|+++.+.+.+++++.
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~---------- 71 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY---------- 71 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH----------
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc----------
Confidence 7999999999999999999999999999875322111 00 1234555666666655555555443
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
++|+|||+++..... ...++|+.|+.++++++.+.+++++++
T Consensus 72 -------------------------------~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~ 120 (338)
T d1orra_ 72 -------------------------------MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120 (338)
T ss_dssp -------------------------------CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred -------------------------------CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 247888887765422 123579999999999999999888887
Q ss_pred eccceeecC
Q psy3626 150 CLSAFLFYE 158 (189)
Q Consensus 150 iSS~~~~~~ 158 (189)
.||+..++.
T Consensus 121 ~sS~~~~~~ 129 (338)
T d1orra_ 121 YSSTNKVYG 129 (338)
T ss_dssp EEEEGGGGT
T ss_pred ccccccccc
Confidence 787766544
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.71 E-value=1.7e-17 Score=129.28 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=97.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-----c-cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-----E-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-----~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+|+|||||||||++++++|+++||+|++++|..+.... + ...+++++.+|+.+.+.+++.+...+.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~------- 73 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQP------- 73 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCC-------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccccc-------
Confidence 689999999999999999999999999999997654321 1 235678888888888887777766533
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCcc-EE
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVS-VV 147 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~-~~ 147 (189)
++++++++..... .....|+.++.+++++|++.+.+ +|
T Consensus 74 ----------------------------------~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~ 119 (321)
T d1rpna_ 74 ----------------------------------QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 119 (321)
T ss_dssp ----------------------------------SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEE
T ss_pred ----------------------------------cccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccc
Confidence 3334433322111 11346899999999999998755 67
Q ss_pred EEeccceeecCCCC-------CCCCCccchhhHHHHHHHhh
Q psy3626 148 SVCLSAFLFYEPSK-------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 148 i~iSS~~~~~~~~~-------~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.||+..++.... ...+..+|..+|...|..+.
T Consensus 120 i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 160 (321)
T d1rpna_ 120 YQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160 (321)
T ss_dssp EEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence 77777665543221 12345667788888888775
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.71 E-value=3.3e-17 Score=131.00 Aligned_cols=160 Identities=15% Similarity=0.089 Sum_probs=103.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHH-cCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK-QGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|||+||||+||||++|+++|++ .|++|+++++-........ .+...+.....++..+. .
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~---------~~~~~~~~~~~~~~~~~-----------~ 62 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSD---------HVETRENVARKLQQSDG-----------P 62 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCT---------TSCCHHHHHHHHHHSCS-----------S
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccch---------hhhhhhhHHHHhhhhcc-----------c
Confidence 5999999999999999999997 5899999875211111000 00011112222211100 0
Q ss_pred CCccccCceeEEeccccCHHHHHHHhc---CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIE---GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.+.....+..++.+|+.|.+.+.+.+. ++|+|+|+|+..... ....+|+.++.++++++++.++++++++
T Consensus 63 ~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~ 142 (383)
T d1gy8a_ 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFS 142 (383)
T ss_dssp CCTTTTCCCEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccccceEEEECcccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccc
Confidence 111123356677777777766665554 569999999865432 2235789999999999999999999999
Q ss_pred ccceeecCCCC--------------CCCCCccchhhHHHHHHHhh
Q psy3626 151 LSAFLFYEPSK--------------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 151 SS~~~~~~~~~--------------~p~~~~~~~~~~~~~~~~l~ 181 (189)
||...+..... ...+..+|..+|...|+++.
T Consensus 143 ~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~ 187 (383)
T d1gy8a_ 143 SSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIR 187 (383)
T ss_dssp EEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHH
Confidence 88877653221 12345678888888888776
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=1.1e-17 Score=130.17 Aligned_cols=132 Identities=16% Similarity=0.106 Sum_probs=94.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+|||||||||++|+++|+++|+.++++++.. ..|+.+.+.+...++..
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~--------------- 53 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASE--------------- 53 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------hccccCHHHHHHHHhhc---------------
Confidence 6899999999999999999999999988765432 14677777776665432
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--------CCcceehhhHHHHHHHHHHCCccEEEEeccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSA 153 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~ 153 (189)
.+|.++++++..... .....|+.++.+++++|++.++++|||+||.
T Consensus 54 --------------------------~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~ 107 (315)
T d1e6ua_ 54 --------------------------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 107 (315)
T ss_dssp --------------------------CCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred --------------------------CCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 246666665443211 1134689999999999999999999999999
Q ss_pred eeecCCCCCC-----------CC-CccchhhHHHHHHHhh----hcCCCCC
Q psy3626 154 FLFYEPSKVP-----------PM-FHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 154 ~~~~~~~~~p-----------~~-~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
.+++.....| .+ -.+|..+|.+.|+++. +.+++++
T Consensus 108 ~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ 158 (315)
T d1e6ua_ 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYR 158 (315)
T ss_dssp GGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred eEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9886532211 11 1247788888988876 3355543
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.70 E-value=1.9e-17 Score=132.79 Aligned_cols=150 Identities=14% Similarity=0.105 Sum_probs=88.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec---C-------CCCCCcccCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR---D-------PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r---~-------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
|||+|||||||||++++++|+++||+|++++. . ........ ...+.+...-..
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~------ 64 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIA-----------SIHDRISRWKAL------ 64 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCC-----------CHHHHHHHHHHH------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCccccccccccccccccc-----------chHHHHHHHHhh------
Confidence 78999999999999999999999999999861 0 01110000 000000000000
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC----------CCcceehhhHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL----------SPTTVMSEGMKNIVTAM 139 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~----------~~~~~~~~~~~~ll~~~ 139 (189)
..+++.++.+|+.|.+.+.+++. ++|+|+|.|+..... .....|+.|+.+++++|
T Consensus 65 -------------~~~~i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~ 131 (393)
T d1i24a_ 65 -------------TGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAI 131 (393)
T ss_dssp -------------HCCCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------cCCCcEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHH
Confidence 01234444555555555555444 358888888754311 11357899999999999
Q ss_pred HHCCcc-EEEEeccceeecCCCC--------------------CCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVS-VVSVCLSAFLFYEPSK--------------------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~-~~i~iSS~~~~~~~~~--------------------~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+ ++++.||...+..... ...+..+|..+|...|.++.
T Consensus 132 ~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~ 194 (393)
T d1i24a_ 132 KEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIA 194 (393)
T ss_dssp HHHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHH
T ss_pred HHhccccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccc
Confidence 998766 4555555544332110 01223457888888887765
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.70 E-value=2e-16 Score=121.91 Aligned_cols=150 Identities=15% Similarity=0.082 Sum_probs=104.5
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
++||+|||||||+|++++++|+++|++|++++|++...... .... ...+.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~-------------~~~~-~~~~~---------------- 52 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNID-------------KVQM-LLYFK---------------- 52 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHH-------------HHHH-HHHHH----------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchh-------------HHHH-Hhhhc----------------
Confidence 46899999999999999999999999999999986544311 0000 00111
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPS 160 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~ 160 (189)
...+.++.+|+.+.+.+.+.+.+.+.++++++... ...+..++.+++.++.+.+..++++.||.+...+..
T Consensus 53 -----~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~ 123 (312)
T d1qyda_ 53 -----QLGAKLIEASLDDHQRLVDALKQVDVVISALAGGV----LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIM 123 (312)
T ss_dssp -----TTTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSS----SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSC
T ss_pred -----cCCcEEEEeecccchhhhhhccCcchhhhhhhhcc----cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCc
Confidence 12456677777777777777778888888776543 234677889999999998777777778765544333
Q ss_pred CCC-CCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 161 KVP-PMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 161 ~~p-~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
..+ .+...+...+...+++.+..+++|++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 153 (312)
T d1qyda_ 124 EHALQPGSITFIDKRKVRRAIEAASIPYTY 153 (312)
T ss_dssp CCCCSSTTHHHHHHHHHHHHHHHTTCCBCE
T ss_pred ccccchhhhhhHHHHHHHHhhcccccceEE
Confidence 332 22334456677788888888998874
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=3.9e-17 Score=128.50 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=93.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||+|||||||||++++++|+++| ++|+++++.......+ ...+++++.+|+++.+++.+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~------------------ 62 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE------------------ 62 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHH------------------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHH------------------
Confidence 489999999999999999999998 5899998865444332 23556677777665443322
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
....++|+|+|+++..... .....|+.++.++++++.+.+. +++++||
T Consensus 63 ------------------------~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss 117 (342)
T d2blla1 63 ------------------------YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPST 117 (342)
T ss_dssp ------------------------HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECC
T ss_pred ------------------------HHHhCCCccccccccccccccccCCccccccccccccccccccccccc-ccccccc
Confidence 1333456677776654321 1245789999999999999986 5567788
Q ss_pred ceeecCCCCC--------------CCCCccchhhHHHHHHHhh
Q psy3626 153 AFLFYEPSKV--------------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 153 ~~~~~~~~~~--------------p~~~~~~~~~~~~~~~~l~ 181 (189)
+..++..+.. ..+...|..+|...|+++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~ 160 (342)
T d2blla1 118 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIW 160 (342)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCCCcchhhhcccchhhhhh
Confidence 7776543221 1122446677888888776
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.68 E-value=4.3e-17 Score=123.49 Aligned_cols=140 Identities=14% Similarity=0.036 Sum_probs=105.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+++||+++++.|+++|++|.+.+|+++..+.....+..++++|++++++++++++.
T Consensus 6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---------------- 69 (248)
T d2d1ya1 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEE---------------- 69 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHH----------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH----------------
Confidence 6899999999999999999999999999999987654322233567889999999999888854
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
+.+.+++.|++|+++|...+.+.. ++|+.+ ++.+++.|++.+.++
T Consensus 70 --------------------~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~ 129 (248)
T d2d1ya1 70 --------------------AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGA 129 (248)
T ss_dssp --------------------HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEE
T ss_pred --------------------HHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccc
Confidence 356778999999999976544322 255555 455566667777789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+.... +....|..+|..++.+.+
T Consensus 130 Ii~isS~~~~~~~----~~~~~Y~asKaal~~ltk 160 (248)
T d2d1ya1 130 IVNVASVQGLFAE----QENAAYNASKGGLVNLTR 160 (248)
T ss_dssp EEEECCGGGTSBC----TTBHHHHHHHHHHHHHHH
T ss_pred ccccccccccccc----cccchhHHHHHHHHHHHH
Confidence 9999999875432 234457777777766554
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.67 E-value=1.4e-16 Score=125.64 Aligned_cols=139 Identities=13% Similarity=0.030 Sum_probs=93.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|||+|||||||||+++++.|+++|++|++++|.+++...+ ...+++++.+|++|++.+.++++..+
T Consensus 9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~--------- 79 (356)
T d1rkxa_ 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQ--------- 79 (356)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHC---------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhch---------
Confidence 7899999999999999999999999999999987765542 12457777888888777777766543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCc-cEEE
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNV-SVVS 148 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~-~~~i 148 (189)
+|+++++++..... ....+|+.++.++++++++.+. ..++
T Consensus 80 --------------------------------~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~ 127 (356)
T d1rkxa_ 80 --------------------------------PEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 127 (356)
T ss_dssp --------------------------------CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEE
T ss_pred --------------------------------hhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccc
Confidence 35555655543221 1234689999999999998764 4555
Q ss_pred EeccceeecCCCC--------CCCCCccchhhHHHHHHHhh
Q psy3626 149 VCLSAFLFYEPSK--------VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 149 ~iSS~~~~~~~~~--------~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.||...+..... ...+..+|...+...+..+.
T Consensus 128 ~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~ 168 (356)
T d1rkxa_ 128 NITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTS 168 (356)
T ss_dssp EECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCCCccccccccchhhhh
Confidence 5555444433211 11223445556665554443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=6.4e-17 Score=122.25 Aligned_cols=140 Identities=18% Similarity=0.087 Sum_probs=105.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||+++++.|+++|++|++.+|+++++..+ ...+..++++|++++++++++++.+
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~------------ 74 (244)
T d1nffa_ 7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTA------------ 74 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHH------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHH------------
Confidence 6899999999999999999999999999999987665433 2456788899999999988888543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhH----HHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGM----KNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~----~~ll~~~~~~~ 143 (189)
.+.+++.|++|+++|.....+.. ++|+.++ +.+++.+++.+
T Consensus 75 ------------------------~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 130 (244)
T d1nffa_ 75 ------------------------VTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG 130 (244)
T ss_dssp ------------------------HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------HHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC
Confidence 56678899999999976544322 2566654 44555666666
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|..++.+.+
T Consensus 131 ~G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~ltk 164 (244)
T d1nffa_ 131 RGSIINISSIEGLAGT----VACHGYTATKFAVRGLTK 164 (244)
T ss_dssp CEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred cceEEecccccccccc----ccccchhhHHHHHHHHHH
Confidence 6899999999875432 234457777777776655
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.67 E-value=1.1e-16 Score=126.17 Aligned_cols=120 Identities=20% Similarity=0.181 Sum_probs=82.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
++|+||||+||||++++++|+++|++|+++.|++++...+ ++......
T Consensus 12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~------------------~~~~~~~~-------------- 59 (342)
T d1y1pa1 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL------------------QKRWDAKY-------------- 59 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH------------------HHHHHHHS--------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHH------------------HHhhhccc--------------
Confidence 6899999999999999999999999999999976443221 11000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----cceehhhHHHHHHHHHHC-CccEEEEeccceee
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----TTVMSEGMKNIVTAMKEY-NVSVVSVCLSAFLF 156 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----~~~~~~~~~~ll~~~~~~-~~~~~i~iSS~~~~ 156 (189)
.......+.+|+.+.+.+.+++.++|.++++++....... ...|+.++.+++++|.+. +++++|++||+.+.
T Consensus 60 ---~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~ 136 (342)
T d1y1pa1 60 ---PGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSA 136 (342)
T ss_dssp ---TTTEEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGT
T ss_pred ---cccccEEEeccccchhhhhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceee
Confidence 0012233445555555555566666777777765443321 246899999999999886 68999999997643
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.67 E-value=2.5e-16 Score=118.42 Aligned_cols=135 Identities=13% Similarity=0.086 Sum_probs=100.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+++||++++++|+++|++|++.+|+.+... ++..+.+|++++++++++++.
T Consensus 8 K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~---------------- 66 (237)
T d1uzma1 8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTA---------------- 66 (237)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHH----------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----CceEEEEecCCHHHHHHHHHH----------------
Confidence 68999999999999999999999999999999876654 456789999999999888754
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhh----HHHHHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
+.+.+++.|++|+++|.....+. .++|+.+ ++.+++.+++.+.++
T Consensus 67 --------------------~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ 126 (237)
T d1uzma1 67 --------------------VEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGR 126 (237)
T ss_dssp --------------------HHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEE
T ss_pred --------------------HHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCc
Confidence 35667889999999997554322 2355555 455667778888889
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+.... +....|..+|..++.+.+
T Consensus 127 Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 157 (237)
T d1uzma1 127 MIFIGSVSGLWGI----GNQANYAASKAGVIGMAR 157 (237)
T ss_dssp EEEECCCCC---------CCHHHHHHHHHHHHHHH
T ss_pred eEEEcchhhccCC----cccHHHHHHHHHHHHHHH
Confidence 9999998876532 223356777777766555
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=3.9e-17 Score=123.37 Aligned_cols=140 Identities=14% Similarity=0.039 Sum_probs=106.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||++++++|+++|++|++.+|+++.++++ .+.+...+.+|++++++++++++.
T Consensus 5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------------- 71 (243)
T d1q7ba_ 5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEK------------- 71 (243)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhh-------------
Confidence 6899999999999999999999999999999987665543 245677889999999998888754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~~~~ 143 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.+++++
T Consensus 72 -----------------------~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 128 (243)
T d1q7ba_ 72 -----------------------IRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR 128 (243)
T ss_dssp -----------------------HHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------hhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC
Confidence 356678899999999876544322 255555 455666667777
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|..++.+.+
T Consensus 129 ~G~II~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 162 (243)
T d1q7ba_ 129 HGRIITIGSVVGTMGN----GGQANYAAAKAGLIGFSK 162 (243)
T ss_dssp CEEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCEeeeecchhhcCCC----CCCHHHHHHHHHHHHHHH
Confidence 7899999998876532 233457777777766655
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.67 E-value=7.5e-17 Score=122.54 Aligned_cols=140 Identities=16% Similarity=0.125 Sum_probs=105.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||++++++|+++|++|++.+|+++++.++ ...+..++++|++++++++++++.
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------------- 72 (254)
T d1hdca_ 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAY------------- 72 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHH-------------
Confidence 6899999999999999999999999999999987655433 235678899999999998888754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~~~~ 143 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.+++.+
T Consensus 73 -----------------------~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~ 129 (254)
T d1hdca_ 73 -----------------------AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG 129 (254)
T ss_dssp -----------------------HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC
Confidence 356678899999999876544321 255555 455566667777
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|..++.+.+
T Consensus 130 ~G~II~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 163 (254)
T d1hdca_ 130 GGSIVNISSAAGLMGL----ALTSSYGASKWGVRGLSK 163 (254)
T ss_dssp CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CCeecccccchhcccc----cchhhHHHHHHHHHHHHH
Confidence 7899999999875432 233456777777766555
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.67 E-value=3.8e-16 Score=123.23 Aligned_cols=138 Identities=20% Similarity=0.120 Sum_probs=97.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+|+|||||||+|++++++|+++|++|+++.|++++.... ...+++++.+|+.++.+
T Consensus 4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~-------------------- 63 (350)
T d1xgka_ 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVP-------------------- 63 (350)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHH--------------------
T ss_pred CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHH--------------------
Confidence 6899999999999999999999999999999987654321 12345566666655332
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~ 158 (189)
.+..++.+++.++...... ...+...++++++++.+.+++++++.||......
T Consensus 64 ----------------------~~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~ 116 (350)
T d1xgka_ 64 ----------------------LMDTLFEGAHLAFINTTSQ-----AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL 116 (350)
T ss_dssp ----------------------HHHHHHTTCSEEEECCCST-----TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG
T ss_pred ----------------------HHHHHhcCCceEEeecccc-----cchhhhhhhHHHHHHHHhCCCceEEEeecccccc
Confidence 2333444455555543322 2236778899999999999888888888765443
Q ss_pred CCCCCCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 159 PSKVPPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
.. +....++...|...++++++++.+|+
T Consensus 117 ~~--~~~~~~~~~~k~~~~~~~~~~~~~~~ 144 (350)
T d1xgka_ 117 YG--PWPAVPMWAPKFTVENYVRQLGLPST 144 (350)
T ss_dssp TS--SCCCCTTTHHHHHHHHHHHTSSSCEE
T ss_pred CC--cccchhhhhhHHHHHHHHHhhccCce
Confidence 22 22334566778888999988888886
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.66 E-value=4.2e-16 Score=119.33 Aligned_cols=147 Identities=20% Similarity=0.223 Sum_probs=102.9
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+|||+|||||||+|+++++.|+++|++|++++|.+....... ....+. .+.
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~------------~~~~~~-~~~---------------- 53 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSE------------KAQLLE-SFK---------------- 53 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHH------------HHHHHH-HHH----------------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchh------------HHHHHH-hhc----------------
Confidence 479999999999999999999999999999999866543210 001111 111
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecCCC
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYEPS 160 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~~~ 160 (189)
...+.++.+|+.+.....+.+.+.+.++++++.. +..++.++++++...+.+++++.||.....+..
T Consensus 54 -----~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~ 120 (307)
T d1qyca_ 54 -----ASGANIVHGSIDDHASLVEAVKNVDVVISTVGSL--------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNV 120 (307)
T ss_dssp -----TTTCEEECCCTTCHHHHHHHHHTCSEEEECCCGG--------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSC
T ss_pred -----cCCcEEEEeecccchhhhhhhhhceeeeeccccc--------ccchhhHHHHHHHHhccccceeeeccccccccc
Confidence 1145667777777777778888888888877543 566788999999998888888877765544333
Q ss_pred CCCCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 161 KVPPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
........+...+...+.++++.+++|++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (307)
T d1qyca_ 121 HAVEPAKSVFEVKAKVRRAIEAEGIPYTY 149 (307)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHTCCBEE
T ss_pred cccccccccccccccccchhhccCCCcee
Confidence 22233333445566777888888888763
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.66 E-value=8.9e-17 Score=125.98 Aligned_cols=156 Identities=16% Similarity=0.094 Sum_probs=96.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++|||||||||++|+++|+++||+|++++|..+......-..+ ..+..+
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~-------------------------- 52 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHI---YIDPHN-------------------------- 52 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTT---C-------------------------------
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhh---hhhhhh--------------------------
Confidence 789999999999999999999999999999997543221000000 000000
Q ss_pred CccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCC-----ccEE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYN-----VSVV 147 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~-----~~~~ 147 (189)
..+..+..+.+|+.+.+.+.+.+. ++|+|+|+|+..... .....|+.++.++++++++.. ..++
T Consensus 53 --~~~~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 130 (339)
T d1n7ha_ 53 --VNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKY 130 (339)
T ss_dssp -----CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred --ccccceEEEEccccCHHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceee
Confidence 001244455555555555554443 468899998865422 224578889999999887542 3467
Q ss_pred EEeccceeecCCCC------CCCCCccchhhHHHHHHHhh----hcCCCCC
Q psy3626 148 SVCLSAFLFYEPSK------VPPMFHNVNDDHQRMYNVLK----DSGLNYI 188 (189)
Q Consensus 148 i~iSS~~~~~~~~~------~p~~~~~~~~~~~~~~~~l~----~~~~~~t 188 (189)
++.||+..+..... ...+...|..+|...|+++. ..+++++
T Consensus 131 ~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 181 (339)
T d1n7ha_ 131 YQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFAC 181 (339)
T ss_dssp EEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred eecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEE
Confidence 77777665543221 12345667888888887764 3355544
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.66 E-value=2.4e-16 Score=119.23 Aligned_cols=140 Identities=15% Similarity=0.088 Sum_probs=103.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc----ccCCceeEEeccccChhHHHHhhhcCcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS----EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (189)
|+++||||+++||+++++.|+++|++|++.+|++..... ....++..+.+|++++++++++++.
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~------------ 73 (247)
T d2ew8a1 6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ------------ 73 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHH------------
Confidence 689999999999999999999999999999998653221 1345678889999999988887754
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHHHC
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMKEY 142 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~~~ 142 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.+++.
T Consensus 74 ------------------------~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 129 (247)
T d2ew8a1 74 ------------------------VISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 129 (247)
T ss_dssp ------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ------------------------HHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc
Confidence 356678899999999976544322 255555 45566677777
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++|++||..+.... +....|..+|..+..+.+
T Consensus 130 ~~G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~ltk 164 (247)
T d2ew8a1 130 GWGRIINLTSTTYWLKI----EAYTHYISTKAANIGFTR 164 (247)
T ss_dssp TCEEEEEECCGGGGSCC----SSCHHHHHHHHHHHHHHH
T ss_pred CCCCccccccchhcccC----cccccchhhhccHHHHHH
Confidence 77899999998875422 223456677777665554
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.66 E-value=2.1e-16 Score=117.34 Aligned_cols=165 Identities=19% Similarity=0.139 Sum_probs=96.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCc--EEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLE--VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|++|+|||||||+|++++++|+++|++ |+.+.|++++...+ ..+++++.+|+++++.+.++++++|.+++++....+
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~ 81 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVPK 81 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-cCCcEEEEeeeccccccccccccceeeEEEEeeccc
Confidence 899999999999999999999999976 55667776544322 345667777777777666666666655555432111
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEeccceeecC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFYE 158 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~~ 158 (189)
. .... ++. .................+++.++++++..+.....+...+.|+......
T Consensus 82 ~------~~~~--------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 138 (252)
T d2q46a1 82 M------KPGF--------DPT---------KGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP 138 (252)
T ss_dssp E------CTTC--------CTT---------SCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT
T ss_pred c------cccc--------chh---------hhhhcccccccchhhhccccccceeeccccccccccccccccccccCCC
Confidence 0 0000 000 0000000000011123467789999999999888888888877654332
Q ss_pred CCCC-CCCCccchhhHHHHHHHhhhcCCCCCC
Q psy3626 159 PSKV-PPMFHNVNDDHQRMYNVLKDSGLNYIA 189 (189)
Q Consensus 159 ~~~~-p~~~~~~~~~~~~~~~~l~~~~~~~t~ 189 (189)
.... ......+...+...+....+++++||+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (252)
T d2q46a1 139 DHPLNKLGNGNILVWKRKAEQYLADSGTPYTI 170 (252)
T ss_dssp TCGGGGGGGCCHHHHHHHHHHHHHHSSSCEEE
T ss_pred Ccccccccccchhhhhhhhhhhhhccccccee
Confidence 1111 111222333445555666677888763
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.65 E-value=1.5e-16 Score=120.67 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=103.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||++++++|+++|++|++.+|+++.+.+. ...++..+.+|++++++++++++.
T Consensus 6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~--------- 76 (251)
T d1vl8a_ 6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA--------- 76 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987655432 234677889999999998888754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~ 139 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.+
T Consensus 77 ---------------------------~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 129 (251)
T d1vl8a_ 77 ---------------------------VKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLL 129 (251)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcc
Confidence 356678899999999976544322 255555 45556667
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+... ..+....|..+|..++.+.+
T Consensus 130 ~~~~~G~Ii~i~S~~~~~~---~~~~~~~Y~asKaal~~lt~ 168 (251)
T d1vl8a_ 130 RESDNPSIINIGSLTVEEV---TMPNISAYAASKGGVASLTK 168 (251)
T ss_dssp TTCSSCEEEEECCGGGTCC---CSSSCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhccc---cCccccchHHHHHhHHHHHH
Confidence 7777789999998754321 11223456777777766555
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.65 E-value=2.1e-16 Score=116.53 Aligned_cols=133 Identities=18% Similarity=0.091 Sum_probs=91.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||+|||||||+|++++++|+++|+ +|+++.|++.... ..+.....| ..++...
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----~~~~~~~~d---~~~~~~~----------------- 58 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----PRLDNPVGP---LAELLPQ----------------- 58 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----TTEECCBSC---HHHHGGG-----------------
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----ccccccccc---hhhhhhc-----------------
Confidence 7999999999999999999999997 5666666543221 222222222 2221111
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-----CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-----SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-----~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
....+|.+++++|..... .....++.++.+++++|++.++++++++||..
T Consensus 59 -------------------------~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~ 113 (212)
T d2a35a1 59 -------------------------LDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALG 113 (212)
T ss_dssp -------------------------CCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred -------------------------cccchheeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccccc
Confidence 122357777777654211 22457888999999999999999999999987
Q ss_pred eecCCCCCCCCCccchhhHHHHHHHhhhcCCC-CCC
Q psy3626 155 LFYEPSKVPPMFHNVNDDHQRMYNVLKDSGLN-YIA 189 (189)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~-~t~ 189 (189)
+... ....|...|...|+.+++.+.+ ||+
T Consensus 114 ~~~~------~~~~y~~~K~~~E~~l~~~~~~~~~I 143 (212)
T d2a35a1 114 ADAK------SSIFYNRVKGELEQALQEQGWPQLTI 143 (212)
T ss_dssp CCTT------CSSHHHHHHHHHHHHHTTSCCSEEEE
T ss_pred cccc------cccchhHHHHHHhhhcccccccccee
Confidence 6542 2335778899999999988875 653
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.65 E-value=1.2e-16 Score=121.29 Aligned_cols=140 Identities=16% Similarity=0.042 Sum_probs=104.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|.++||||+++||+++++.|+++|++|++.+|+++.+++. ...++..+.+|++++++++++++.
T Consensus 11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~---------- 80 (251)
T d2c07a1 11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK---------- 80 (251)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH----------
Confidence 5799999999999999999999999999999987655432 234678889999999988887754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~ 140 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.++
T Consensus 81 --------------------------~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~ 134 (251)
T d2c07a1 81 --------------------------ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI 134 (251)
T ss_dssp --------------------------HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccc
Confidence 356677899999999876544322 255555 455666677
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|++||..+....+ ....|..+|..++.+.+
T Consensus 135 ~~~~G~IVnisS~~~~~~~~----~~~~Y~asKaal~~ltr 171 (251)
T d2c07a1 135 NNRYGRIINISSIVGLTGNV----GQANYSSSKAGVIGFTK 171 (251)
T ss_dssp HHTCEEEEEECCTHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEECCHHhcCCCC----CCHHHHHHHHHHHHHHH
Confidence 77778999999988765322 23357777777766655
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=3.3e-16 Score=118.26 Aligned_cols=140 Identities=17% Similarity=0.057 Sum_probs=103.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||++++++|+++|++|++.+|+++++.++ ...++..+.+|++++++++.+++.+
T Consensus 8 kv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i--------- 78 (244)
T d1yb1a_ 8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV--------- 78 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999998765533 2356788889999998888877543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~ 140 (189)
.+.+++.|++|+++|........ ++|+.+ ++.+++.++
T Consensus 79 ---------------------------~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~ 131 (244)
T d1yb1a_ 79 ---------------------------KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT 131 (244)
T ss_dssp ---------------------------HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHH
Confidence 45677899999999977655332 255555 455677778
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+++|++||..+... . +.+..|..+|.+...+.+
T Consensus 132 ~~~~G~Iv~isS~~~~~~---~-~~~~~Y~asKaal~~~~~ 168 (244)
T d1yb1a_ 132 KNNHGHIVTVASAAGHVS---V-PFLLAYCSSKFAAVGFHK 168 (244)
T ss_dssp HTTCEEEEEECCCC-CCC---H-HHHHHHHHHHHHHHHHHH
T ss_pred hcCCceEEEeecchhcCC---C-CCcHHHHHHHHHHHHHHH
Confidence 888889999999987542 1 123346666666554444
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.63 E-value=1.7e-16 Score=120.97 Aligned_cols=140 Identities=16% Similarity=0.138 Sum_probs=104.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+++. ...++..+.+|++++++++++++.+
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~--------- 76 (260)
T d1zema1 6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSV--------- 76 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987655432 2346788899999999988888543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-CC-----------cceehhh----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-SP-----------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-~~-----------~~~~~~~----~~~ll~~~ 139 (189)
.+.+++.|++|+++|..... +. .++|+.+ ++.+++.+
T Consensus 77 ---------------------------~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m 129 (260)
T d1zema1 77 ---------------------------VRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQM 129 (260)
T ss_dssp ---------------------------HHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhh
Confidence 56678899999999965432 11 1255555 44555666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +....|..+|...+.+.+
T Consensus 130 ~~~~~G~II~isS~~~~~~~----~~~~~Y~asKaal~~ltk 167 (260)
T d1zema1 130 ITQNYGRIVNTASMAGVKGP----PNMAAYGTSKGAIIALTE 167 (260)
T ss_dssp HHHTCEEEEEECCHHHHSCC----TTBHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCCeeechhhccCC----cchHHHHHHHHHHHHHHH
Confidence 66677899999998876532 233457777777766555
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.63 E-value=2.9e-16 Score=118.49 Aligned_cols=139 Identities=21% Similarity=0.138 Sum_probs=101.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+++. ...+...+.+|++++++++++++.+
T Consensus 6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-------------- 71 (242)
T d1ulsa_ 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEA-------------- 71 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHH--------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHH--------------
Confidence 5799999999999999999999999999999987665543 2345778999999999998888643
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhH----HHHHHHHHHCCcc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGM----KNIVTAMKEYNVS 145 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~----~~ll~~~~~~~~~ 145 (189)
.+.+++.|++|+++|.....+.. ++|+.+. +.+++.+++.+.+
T Consensus 72 ----------------------~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~ 129 (242)
T d1ulsa_ 72 ----------------------LAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPG 129 (242)
T ss_dssp ----------------------HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred ----------------------HHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccc
Confidence 56678899999999976544322 2555554 4455556666667
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++++||..... .+....|..+|..++.+.+
T Consensus 130 ~i~~~ss~~~~~-----~~~~~~Y~asKaal~~ltk 160 (242)
T d1ulsa_ 130 SIVLTASRVYLG-----NLGQANYAASMAGVVGLTR 160 (242)
T ss_dssp EEEEECCGGGGC-----CTTCHHHHHHHHHHHHHHH
T ss_pred eeeeeccccccC-----CCCCcchHHHHHHHHHHHH
Confidence 787777754221 1234457777777766655
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.63 E-value=2.6e-16 Score=119.82 Aligned_cols=140 Identities=13% Similarity=0.119 Sum_probs=103.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+++||+++++.|+++|++|.+.+|+++.++.. ...++..+.+|++++++++++++.
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~-------- 76 (258)
T d1iy8a_ 5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTA-------- 76 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHH--------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHH--------
Confidence 6899999999999999999999999999999987655432 124677889999999998888854
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-C-----------cceehhhH----HHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-P-----------TTVMSEGM----KNIVT 137 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-~-----------~~~~~~~~----~~ll~ 137 (189)
+.+.+++.|++|+++|...... . .++|+.+. +.+++
T Consensus 77 ----------------------------~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 128 (258)
T d1iy8a_ 77 ----------------------------TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK 128 (258)
T ss_dssp ----------------------------HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----------------------------HHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHh
Confidence 3567788999999998653321 1 12566654 44555
Q ss_pred HHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 138 AMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 138 ~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+.+++|++||..+.... +....|..+|..+..+.+
T Consensus 129 ~m~~~~~G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 168 (258)
T d1iy8a_ 129 IMREQGSGMVVNTASVGGIRGI----GNQSGYAAAKHGVVGLTR 168 (258)
T ss_dssp HHHHHTCCEEEEECCGGGTSBC----SSBHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCcccccHhhccCC----CCchHHHHHHHHHHHHHH
Confidence 6666677899999998875422 234457777777665554
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.63 E-value=3.2e-16 Score=118.85 Aligned_cols=140 Identities=19% Similarity=0.126 Sum_probs=102.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+++. ...++.++.+|++++++++++++.
T Consensus 7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~----------- 75 (251)
T d1zk4a1 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDA----------- 75 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH-----------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHH-----------
Confidence 6899999999999999999999999999999987655432 235678899999999998888854
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhH----HHHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGM----KNIVTAMKE 141 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~----~~ll~~~~~ 141 (189)
+.+.+++.|++|+++|.....+.. ++|+.++ +.+++.|++
T Consensus 76 -------------------------~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~ 130 (251)
T d1zk4a1 76 -------------------------TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN 130 (251)
T ss_dssp -------------------------HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred -------------------------HHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHh
Confidence 356778999999999876544322 3666664 444555566
Q ss_pred CCc-cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNV-SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~-~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+. +++|++||..+.... +....|..+|..+..+.+
T Consensus 131 ~~~gg~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 167 (251)
T d1zk4a1 131 KGLGASIINMSSIEGFVGD----PSLGAYNASKGAVRIMSK 167 (251)
T ss_dssp SSSCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred cCCCCceEeeeccceeccC----CCchhHHHHHHHHhcchH
Confidence 664 489999998775422 223356667776655444
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.63 E-value=3.3e-16 Score=119.34 Aligned_cols=140 Identities=15% Similarity=0.053 Sum_probs=104.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+++||++++++|+++|++|++.+|++.. +++. ...++.++.+|++++++++++++.
T Consensus 5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~-------- 76 (260)
T d1x1ta1 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN-------- 76 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH--------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH--------
Confidence 579999999999999999999999999999997532 2211 235678889999999998888754
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~ 138 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.
T Consensus 77 ----------------------------~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 128 (260)
T d1x1ta1 77 ----------------------------AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128 (260)
T ss_dssp ----------------------------HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhh
Confidence 356678899999999976544322 255555 4556777
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+.+++|++||..+.... +....|..+|.....+.+
T Consensus 129 m~~~~~G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 167 (260)
T d1x1ta1 129 MKKQGFGRIINIASAHGLVAS----ANKSAYVAAKHGVVGFTK 167 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhhcCCceEeecccccceecc----CCcchhhhhhhhHHHhHH
Confidence 777777899999999876532 233457777777766555
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.62 E-value=6.3e-16 Score=117.70 Aligned_cols=140 Identities=14% Similarity=0.020 Sum_probs=102.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+++. ...+..++.+|++++++++++++.+
T Consensus 9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~--------- 79 (259)
T d2ae2a_ 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV--------- 79 (259)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987665432 2346778889999998888877543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhc-CCCEEEEeeccCCCCCCc-----------ceehhhH----HHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE-GKDGVVVALGTRNDLSPT-----------TVMSEGM----KNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vv~~~~~~~~~~~~-----------~~~~~~~----~~ll~~~ 139 (189)
.+.++ +.|++|+++|.....+.. ++|+.++ +.+++.+
T Consensus 80 ---------------------------~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 132 (259)
T d2ae2a_ 80 ---------------------------ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFL 132 (259)
T ss_dssp ---------------------------HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchh
Confidence 34444 689999999976544322 2555554 5556667
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+.... +....|..+|..++.+.+
T Consensus 133 ~~~~~G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 170 (259)
T d2ae2a_ 133 KASERGNVVFISSVSGALAV----PYEAVYGATKGAMDQLTR 170 (259)
T ss_dssp HHTSSEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccccc----ccccchHHHHHHHHHHHH
Confidence 77777899999998875422 233456667777766655
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.62 E-value=3e-16 Score=119.32 Aligned_cols=140 Identities=13% Similarity=0.003 Sum_probs=102.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+.++ .+.+...+.+|++++++++++++.+
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~------------ 73 (256)
T d1k2wa_ 6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAEL------------ 73 (256)
T ss_dssp EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHH------------
Confidence 5799999999999999999999999999999987655433 2467788999999999998888543
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHHH----HHHHHH-C
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKNI----VTAMKE-Y 142 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~l----l~~~~~-~ 142 (189)
.+.+++.|++|+++|.....+.. ++|+.+...+ ++.+.+ .
T Consensus 74 ------------------------~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~ 129 (256)
T d1k2wa_ 74 ------------------------LDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGG 129 (256)
T ss_dssp ------------------------HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------HHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhc
Confidence 56678899999999976544322 3666665444 443333 3
Q ss_pred CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 ~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++|++||..+.... +....|..+|..++.+.+
T Consensus 130 ~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 164 (256)
T d1k2wa_ 130 RGGKIINMASQAGRRGE----ALVGVYCATKAAVISLTQ 164 (256)
T ss_dssp SCEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred cCCccccccchhhcccc----ccccchhhhhhHHHHHHH
Confidence 45799999998875422 223456666777765555
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.62 E-value=2.5e-15 Score=113.57 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=99.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHH---cCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALK---QGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
||+|+||||+++||++++++|++ +|++|++.+|++++++.+ ...++.++.+|++++++++++++..+.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~---- 77 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG---- 77 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH----
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHH----
Confidence 89999999999999999999974 599999999998877643 235788899999999888887754310
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC------------cceehhhHHH----HH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP------------TTVMSEGMKN----IV 136 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~----ll 136 (189)
....++.|++|+++|....... .++|..+... ++
T Consensus 78 ------------------------------~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~ 127 (248)
T d1snya_ 78 ------------------------------VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL 127 (248)
T ss_dssp ------------------------------HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ------------------------------HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHH
Confidence 1234578999999986443321 1256666444 44
Q ss_pred HHHHHC-----------CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 TAMKEY-----------NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 ~~~~~~-----------~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+++. +.+++|.+||..+....... +....|..+|.....+.+
T Consensus 128 p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~-~~~~~Y~aSKaal~~lt~ 182 (248)
T d1snya_ 128 PLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD-GGMYAYRTSKSALNAATK 182 (248)
T ss_dssp HHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCS-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhccccccccccccccccccccccccCCCCC-CChHHHHHHHHHHHHHHH
Confidence 445442 34689999998765332212 223356666766655443
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=3.6e-16 Score=118.45 Aligned_cols=139 Identities=17% Similarity=0.062 Sum_probs=103.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.++.+. ..+..++.+|++++++++++++.
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~-------------- 72 (250)
T d1ydea1 7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSE-------------- 72 (250)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHH--------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHH--------------
Confidence 68999999999999999999999999999999876655432 24678899999999999888864
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-C-----------cceehhh----HHHHHHHHHHCC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-P-----------TTVMSEG----MKNIVTAMKEYN 143 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-~-----------~~~~~~~----~~~ll~~~~~~~ 143 (189)
+.+.+++.|++|+++|...... . .++|+.+ ++.+++.+++.+
T Consensus 73 ----------------------~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 130 (250)
T d1ydea1 73 ----------------------TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ 130 (250)
T ss_dssp ----------------------HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------HHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC
Confidence 3566788999999998543322 1 1255555 444555666654
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..+.... +....|...|..+..+.+
T Consensus 131 -G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 163 (250)
T d1ydea1 131 -GNVINISSLVGAIGQ----AQAVPYVATKGAVTAMTK 163 (250)
T ss_dssp -CEEEEECCHHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred -CCCcccccccccccc----cCcchhHHHHhhHHHHHH
Confidence 799999999876532 233457777777766655
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.62 E-value=6e-16 Score=118.35 Aligned_cols=141 Identities=14% Similarity=0.088 Sum_probs=101.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+++||||+++||++++++|+++|++|++.+|+++.+++. ....+.++.+|++++++++++++.+
T Consensus 7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~---------- 76 (268)
T d2bgka1 7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT---------- 76 (268)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH----------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHH----------
Confidence 6899999999999999999999999999999987655432 1245778899999999988888543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--C-----------cceehhh----HHHHHHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--P-----------TTVMSEG----MKNIVTAM 139 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--~-----------~~~~~~~----~~~ll~~~ 139 (189)
.+.+++.|++|+++|.....+ . .++|..+ ++.+++.+
T Consensus 77 --------------------------~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 130 (268)
T d2bgka1 77 --------------------------IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 130 (268)
T ss_dssp --------------------------HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred --------------------------HHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchH
Confidence 566788999999998644321 1 1255555 45556666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++++.+++|++||..+.... +.....|..+|..++.+.+
T Consensus 131 ~~~~~g~ii~iss~~~~~~~---~~~~~~Y~asKaal~~lt~ 169 (268)
T d2bgka1 131 IPAKKGSIVFTASISSFTAG---EGVSHVYTATKHAVLGLTT 169 (268)
T ss_dssp GGGTCEEEEEECCGGGTCCC---TTSCHHHHHHHHHHHHHHH
T ss_pred hhcCCCCccccccccccccc---cccccccchhHHHHHhCHH
Confidence 67777899999998765421 1222235556777665555
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.61 E-value=6.5e-16 Score=117.48 Aligned_cols=140 Identities=15% Similarity=0.061 Sum_probs=104.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|.++||||+++||+++++.|+++|++|++.+|+++.+++. ...++..+.+|++++++++++++.
T Consensus 3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~---------- 72 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA---------- 72 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH----------
Confidence 5679999999999999999999999999999987655432 235678899999999998888754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH----
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK---- 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~---- 140 (189)
+.+.+++.|++|+++|.....+. .++|+.+..++.+++.
T Consensus 73 --------------------------~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~ 126 (257)
T d2rhca1 73 --------------------------VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGG 126 (257)
T ss_dssp --------------------------HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTS
T ss_pred --------------------------HHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHH
Confidence 35667889999999997654432 2367777776666553
Q ss_pred --HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 --EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 --~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+.+++|.+||..+.... +....|..+|..+..+.+
T Consensus 127 ~~~~~~g~Ii~i~S~~~~~~~----~~~~~Y~asKaal~~ltk 165 (257)
T d2rhca1 127 MLERGTGRIVNIASTGGKQGV----VHAAPYSASKHGVVGFTK 165 (257)
T ss_dssp HHHHTEEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHhcCCccccccccccccccc----ccchhHHHHHHHHHHHHH
Confidence 3456799999998875432 223456777777766655
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=4.5e-16 Score=118.28 Aligned_cols=140 Identities=10% Similarity=-0.027 Sum_probs=103.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||++++++|+++|++|++.+|+++.+++. ...++.++++|++++++++++++.
T Consensus 12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~---------- 81 (255)
T d1fmca_ 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF---------- 81 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH----------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH----------
Confidence 6899999999999999999999999999999987655432 235677889999999988887754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhH----HHHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGM----KNIVTAMKE 141 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~----~~ll~~~~~ 141 (189)
+.+.+++.|++|+++|.....+. .++|+.+. +.+++.+++
T Consensus 82 --------------------------~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~ 135 (255)
T d1fmca_ 82 --------------------------AISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK 135 (255)
T ss_dssp --------------------------HHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcc
Confidence 35667889999999987654321 12565554 445566667
Q ss_pred CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+.... +....|..+|..++.+.+
T Consensus 136 ~~~g~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 171 (255)
T d1fmca_ 136 NGGGVILTITSMAAENKN----INMTSYASSKAAASHLVR 171 (255)
T ss_dssp HTCEEEEEECCGGGTCCC----TTCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhccc----cccccchhHHHHHHHHHH
Confidence 777799999998765432 233456677777766555
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.61 E-value=1.6e-15 Score=114.20 Aligned_cols=139 Identities=12% Similarity=0.025 Sum_probs=103.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCc-------EEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLE-------VCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~-------v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
.++||||+++||++++++|+++|++ |...+|+++.++++ ...++.++.+|++++++++++++.
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~---- 78 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTH---- 78 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH----
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH----
Confidence 4799999999999999999999987 88889987665432 234677889999999998888754
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHH
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKN 134 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ 134 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.
T Consensus 79 --------------------------------~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~ 126 (240)
T d2bd0a1 79 --------------------------------IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQA 126 (240)
T ss_dssp --------------------------------HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --------------------------------HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHH
Confidence 356678899999999976544322 255555 455
Q ss_pred HHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 135 IVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.|++++.+++|++||..+....+ ....|..+|..++.+.+
T Consensus 127 ~~~~m~~~~~G~Ii~isS~~~~~~~~----~~~~Y~asK~al~~lt~ 169 (240)
T d2bd0a1 127 LFALMERQHSGHIFFITSVAATKAFR----HSSIYCMSKFGQRGLVE 169 (240)
T ss_dssp HHHHHHHHTCEEEEEECCGGGTSCCT----TCHHHHHHHHHHHHHHH
T ss_pred HhHHHHhcCCCceEEEechhhcCCCC----CChHHHHHHHHHHHHHH
Confidence 67777777778999999998765322 23456677776665544
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.61 E-value=4.4e-16 Score=119.36 Aligned_cols=128 Identities=16% Similarity=0.158 Sum_probs=90.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+|||||||+|++|+++|.++|+.| ++.++... +.+|+++++.+++.+++.
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-----------~~~Dl~~~~~~~~~i~~~--------------- 53 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-----------FCGDFSNPKGVAETVRKL--------------- 53 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-----------SCCCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-----------ccCcCCCHHHHHHHHHHc---------------
Confidence 579999999999999999998888744 44444321 235777777777766543
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC-------CCcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL-------SPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~-------~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+|||+||..... .....|+.++.++++++++.+. +++++||+.
T Consensus 54 --------------------------~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~ 106 (298)
T d1n2sa_ 54 --------------------------RPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDY 106 (298)
T ss_dssp --------------------------CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGG
T ss_pred --------------------------CCCEEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccc
Confidence 357888887754321 1234788899999999998874 677788877
Q ss_pred eecCCCCC-------CCCCccchhhHHHHHHHhhhc
Q psy3626 155 LFYEPSKV-------PPMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 155 ~~~~~~~~-------p~~~~~~~~~~~~~~~~l~~~ 183 (189)
.++..... +.+...|...+...|+.+.+.
T Consensus 107 ~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~ 142 (298)
T d1n2sa_ 107 VFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN 142 (298)
T ss_dssp GSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence 66543322 234566778888888888754
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=8.5e-16 Score=116.95 Aligned_cols=140 Identities=14% Similarity=0.027 Sum_probs=94.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+.+. ...++..+.+|++++++++++++.+
T Consensus 9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--------- 79 (259)
T d1xq1a_ 9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV--------- 79 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999987665432 2346788889999998888877543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~ 139 (189)
.+.+ +..|++|+++|.....+.. ++|+.+ ++.+++.+
T Consensus 80 ---------------------------~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 132 (259)
T d1xq1a_ 80 ---------------------------SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLL 132 (259)
T ss_dssp ---------------------------HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcc
Confidence 3445 4689999999976544321 255555 45556666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+.+++|++||..+....+ ....|..+|..+..+.+
T Consensus 133 ~~~~~G~Iv~isS~~~~~~~~----~~~~Y~asKaal~~lt~ 170 (259)
T d1xq1a_ 133 KASGCGNIIFMSSIAGVVSAS----VGSIYSATKGALNQLAR 170 (259)
T ss_dssp HHHSSCEEEEEC--------------CCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccc----ccccccccccchhhhhH
Confidence 777778999999988764322 23356677777766555
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.60 E-value=5.5e-16 Score=117.64 Aligned_cols=139 Identities=14% Similarity=0.100 Sum_probs=102.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.++++ ...+..++.+|+++++++++.++.
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~------------- 73 (253)
T d1hxha_ 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAA------------- 73 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHH-------------
Confidence 6899999999999999999999999999999987655433 245677888999999988887754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHHHCC
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMKEYN 143 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~~~~ 143 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.+++.+
T Consensus 74 -----------------------~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 130 (253)
T d1hxha_ 74 -----------------------VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG 130 (253)
T ss_dssp -----------------------HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC
T ss_pred -----------------------HHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC
Confidence 356678899999999976544321 255555 445556665555
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++|++||..+.... +....|..+|..+..+.+
T Consensus 131 -G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 163 (253)
T d1hxha_ 131 -GSIINMASVSSWLPI----EQYAGYSASKAAVSALTR 163 (253)
T ss_dssp -EEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred -CceecccchhhhcCc----cccccccchhHHHHHHHH
Confidence 799999998875421 233456777777665554
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.60 E-value=1e-15 Score=116.25 Aligned_cols=140 Identities=16% Similarity=0.085 Sum_probs=100.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|.++||||+++||++++++|+++|++|++.+|+++.++++ ...++..+.+|++++++++++++.
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~---------- 71 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ---------- 71 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH----------
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH----------
Confidence 3469999999999999999999999999999987665432 235678889999999998888754
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHH----HHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNI----VTAMK 140 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~l----l~~~~ 140 (189)
+.+.+++.|++|+++|.....+. .++|+.+..++ ++.+.
T Consensus 72 --------------------------~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~ 125 (255)
T d1gega_ 72 --------------------------ARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFK 125 (255)
T ss_dssp --------------------------HHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred --------------------------HHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhh
Confidence 35667889999999997554322 23666665444 44444
Q ss_pred HCC-ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 141 EYN-VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 141 ~~~-~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+.+ .+++|++||..+.... +....|..+|...+.+.+
T Consensus 126 ~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~ltk 163 (255)
T d1gega_ 126 KEGHGGKIINACSQAGHVGN----PELAVYSSSKFAVRGLTQ 163 (255)
T ss_dssp HHTSCEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred hhccccccccccchhhcccC----cccccchhCHHHHHhhHH
Confidence 443 5689999988764321 223346666777665554
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.58 E-value=2e-15 Score=114.93 Aligned_cols=140 Identities=17% Similarity=0.141 Sum_probs=100.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC-CCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR-LPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~-~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||++++++|+++|++|++.+|+.+. ++.. ...++..+.+|++++++++++++.
T Consensus 8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~--------- 78 (261)
T d1geea_ 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS--------- 78 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH---------
Confidence 689999999999999999999999999999998643 2211 234677889999999988887754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~ 139 (189)
+.+.+++.|++|+++|.....+.. ++|+.+ ++.+++.+
T Consensus 79 ---------------------------~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 131 (261)
T d1geea_ 79 ---------------------------AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYF 131 (261)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhh
Confidence 356678899999999976554322 255555 45566677
Q ss_pred HHCCc-cEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNV-SVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~-~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+. +++|++||..+.... +....|..+|..++.+.+
T Consensus 132 ~~~~~g~~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 170 (261)
T d1geea_ 132 VENDIKGTVINMSSVHEKIPW----PLFVHYAASKGGMKLMTE 170 (261)
T ss_dssp HHTTCCCEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhcccC----ccccccccCCccchhhHH
Confidence 77664 468889988764321 223356667777665554
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=3e-15 Score=112.91 Aligned_cols=136 Identities=13% Similarity=0.026 Sum_probs=96.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+++||++++++|+++|++|++.+|+++.++++. ..++..+.+|+++++++++.++.
T Consensus 8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-------------- 73 (244)
T d1pr9a_ 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS-------------- 73 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT--------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH--------------
Confidence 68999999999999999999999999999999876655431 24567788888888887766643
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHH-HHCC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAM-KEYN 143 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~-~~~~ 143 (189)
+++.|++|+++|.....+.. ++|+.+ ++.+++.+ ++.+
T Consensus 74 --------------------------~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~ 127 (244)
T d1pr9a_ 74 --------------------------VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV 127 (244)
T ss_dssp --------------------------CCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred --------------------------hCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC
Confidence 34678999998876544322 255555 44455543 3445
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|...+.+.+
T Consensus 128 ~g~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 161 (244)
T d1pr9a_ 128 PGAIVNVSSQCSQRAV----TNHSVYCSTKGALDMLTK 161 (244)
T ss_dssp CEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred cceEeecccccccccc----cchhhhhhhHHHHHHHHH
Confidence 6899999998875422 223456677777766555
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.58 E-value=1.6e-15 Score=114.46 Aligned_cols=140 Identities=18% Similarity=0.085 Sum_probs=101.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec-CCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR-DPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r-~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+.++||||+++||++++++|+++|++|++.++ +++..+.+ ...++.++.+|++++++++++++.
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~--------- 72 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKT--------- 72 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHH---------
Confidence 56899999999999999999999999988755 43333221 235677888999998888887754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~ 139 (189)
+.+.+++.|++|+++|.....+.. ++|..+ ++.+++.|
T Consensus 73 ---------------------------~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m 125 (244)
T d1edoa_ 73 ---------------------------AIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIM 125 (244)
T ss_dssp ---------------------------HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 355677899999999876544322 255555 45566677
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++++.+++|++||..+....+ ....|..+|..+..+.+
T Consensus 126 ~~~~~G~IVnisS~~~~~~~~----~~~~Y~asKaal~~ltk 163 (244)
T d1edoa_ 126 MKKRKGRIINIASVVGLIGNI----GQANYAAAKAGVIGFSK 163 (244)
T ss_dssp HHHTCEEEEEECCTHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEEEcChhhcCCCC----CCHHHHHHHHHHHHChH
Confidence 777778999999988765322 23356677777766555
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=9.4e-15 Score=110.97 Aligned_cols=141 Identities=17% Similarity=0.133 Sum_probs=101.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+++||+++++.|+++|++|++.+|++++++++ ...++.++.+|++++++++++++.
T Consensus 11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~-------- 82 (257)
T d1xg5a_ 11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSA-------- 82 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHH--------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHH--------
Confidence 5799999999999999999999999999999987665432 123577889999999998888754
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHH
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTA 138 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~ 138 (189)
+.+.+++.|++|+++|.....+.. ++|..+ ++.+++.
T Consensus 83 ----------------------------~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 134 (257)
T d1xg5a_ 83 ----------------------------IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 134 (257)
T ss_dssp ----------------------------HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ----------------------------HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 456778899999999976544322 245444 3445666
Q ss_pred HHHCC--ccEEEEeccceeecCCCCCCCC-CccchhhHHHHHHHhh
Q psy3626 139 MKEYN--VSVVSVCLSAFLFYEPSKVPPM-FHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~--~~~~i~iSS~~~~~~~~~~p~~-~~~~~~~~~~~~~~l~ 181 (189)
+++.+ .+++|++||..+... .|.. ...|..+|..+..+.+
T Consensus 135 ~~~~~~~~g~Ii~isS~~~~~~---~p~~~~~~Y~~sKaal~~ltr 177 (257)
T d1xg5a_ 135 MKERNVDDGHIININSMSGHRV---LPLSVTHFYSATKYAVTALTE 177 (257)
T ss_dssp HHHTTCCSCEEEEECCGGGTSC---CSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCceEEEechHhcCC---CCCcccHHHHHHHHHHHhCHH
Confidence 66654 479999999886532 2222 2235666666655543
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.57 E-value=1.4e-15 Score=116.79 Aligned_cols=139 Identities=19% Similarity=0.191 Sum_probs=100.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+.++ ...++..+.+|++++++++++++.
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~------------- 72 (276)
T d1bdba_ 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASR------------- 72 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHH-------------
Confidence 4899999999999999999999999999999987666543 245678889999999988887754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------------cceehhh----HHHHHHH
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------------TTVMSEG----MKNIVTA 138 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------------~~~~~~~----~~~ll~~ 138 (189)
+.+.+++.|++|+++|....... .++|+.+ ++.+++.
T Consensus 73 -----------------------~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~ 129 (276)
T d1bdba_ 73 -----------------------CVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPA 129 (276)
T ss_dssp -----------------------HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred -----------------------HHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHH
Confidence 35667889999999986432211 1245555 4555666
Q ss_pred HHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+ +++|+++|..+.... +....|..+|..++.+.+
T Consensus 130 m~~~~-g~iI~i~S~~~~~~~----~~~~~Y~asKaal~~ltr 167 (276)
T d1bdba_ 130 LVASR-GNVIFTISNAGFYPN----GGGPLYTAAKHAIVGLVR 167 (276)
T ss_dssp HHHHT-CEEEEECCGGGTSTT----SSCHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCceeeeechhccCC----CCCchHHHHHHHHHHHHH
Confidence 66665 688888887765422 223346667777766555
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.57 E-value=4.1e-15 Score=112.04 Aligned_cols=136 Identities=17% Similarity=0.059 Sum_probs=95.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--CCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|+++||||+++||++++++|+++|++|++.+|+++.+.++. ..++..+.+|++++++++++++.
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-------------- 71 (242)
T d1cyda_ 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGG-------------- 71 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT--------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH--------------
Confidence 68999999999999999999999999999999876554331 24567788888888877766643
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHHH----HHHHH-HCC
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKNI----VTAMK-EYN 143 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~l----l~~~~-~~~ 143 (189)
+++.|++|+++|.....+.. ++|..+...+ ++.+. +.+
T Consensus 72 --------------------------~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~ 125 (242)
T d1cyda_ 72 --------------------------IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV 125 (242)
T ss_dssp --------------------------CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred --------------------------cCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc
Confidence 34679999998875544322 2555554444 44333 334
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|...|..++.+.+
T Consensus 126 ~g~ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 159 (242)
T d1cyda_ 126 PGSIVNVSSMVAHVTF----PNLITYSSTKGAMTMLTK 159 (242)
T ss_dssp CEEEEEECCGGGTSCC----TTBHHHHHHHHHHHHHHH
T ss_pred cCcccccchhhccccC----CccccccchHHHHHHHHH
Confidence 5799999998765421 223456677777766655
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=7.5e-15 Score=111.32 Aligned_cols=140 Identities=16% Similarity=0.030 Sum_probs=101.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+++||+++++.|+++|++|++.+|+++++.+. ...++.++.+|++++++++++++.
T Consensus 4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~-------- 75 (254)
T d2gdza1 4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRK-------- 75 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHH--------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHH--------
Confidence 6899999999999999999999999999999987554321 134677889999999998888754
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---cceehhh----HHHHHHHHHHCC---
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---TTVMSEG----MKNIVTAMKEYN--- 143 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---~~~~~~~----~~~ll~~~~~~~--- 143 (189)
+.+.+++.|++|+++|....... .++|..+ ++.+++.+++.+
T Consensus 76 ----------------------------~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~ 127 (254)
T d2gdza1 76 ----------------------------VVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGE 127 (254)
T ss_dssp ----------------------------HHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC
T ss_pred ----------------------------HHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCC
Confidence 35667889999999998765432 2355554 445566665542
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +....|..+|..+..+.+
T Consensus 128 ~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~ltr 161 (254)
T d2gdza1 128 GGIIINMSSLAGLMPV----AQQPVYCASKHGIVGFTR 161 (254)
T ss_dssp CEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred CcEEEeeccHhhccCC----CCccchHHHHHHHHHHHH
Confidence 3689999999875432 223356667776665443
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.56 E-value=1.2e-14 Score=110.47 Aligned_cols=140 Identities=16% Similarity=0.063 Sum_probs=100.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+++||++++++|+++|++|++.+|+++.+++. ......++.+|++++++++++++.+
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~--------- 77 (258)
T d1ae1a_ 7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV--------- 77 (258)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHH---------
Confidence 6899999999999999999999999999999997655432 2345677888998888888776543
Q ss_pred CCCCCCCccccCceeEEeccccCHHHHHHHh-cCCCEEEEeeccCCCCCCcc-----------eehhhH----HHHHHHH
Q psy3626 76 RDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGVVVALGTRNDLSPTT-----------VMSEGM----KNIVTAM 139 (189)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~~~~~~~~~~~~-----------~~~~~~----~~ll~~~ 139 (189)
.+.+ +..|++++++|.....+..+ +|..+. +.+++.+
T Consensus 78 ---------------------------~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m 130 (258)
T d1ae1a_ 78 ---------------------------AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLL 130 (258)
T ss_dssp ---------------------------HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccc
Confidence 3444 35789999988766543322 444443 4445566
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+.+++|++||..+.... +....|...|..++.+.+
T Consensus 131 ~~~~~g~ii~isS~~~~~~~----~~~~~Y~~sK~al~~lt~ 168 (258)
T d1ae1a_ 131 KASQNGNVIFLSSIAGFSAL----PSVSLYSASKGAINQMTK 168 (258)
T ss_dssp HHHTSEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc----ccchhHHHHHHHHHHHHH
Confidence 67777899999999875432 223356666766665554
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.55 E-value=3.8e-15 Score=114.20 Aligned_cols=140 Identities=14% Similarity=0.070 Sum_probs=99.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+++. ...++..+.+|++++++++++++.
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~------- 77 (274)
T d1xhla_ 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT------- 77 (274)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH-------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHH-------
Confidence 6899999999999999999999999999999987655432 123577888999999888887754
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--C-----------cceehhh----HHHH
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--P-----------TTVMSEG----MKNI 135 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--~-----------~~~~~~~----~~~l 135 (189)
+.+.+++.|++|+++|...... . .++|..+ ++.+
T Consensus 78 -----------------------------~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~ 128 (274)
T d1xhla_ 78 -----------------------------TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKT 128 (274)
T ss_dssp -----------------------------HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -----------------------------HHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccc
Confidence 3566788999999998643221 1 1245554 4556
Q ss_pred HHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 136 VTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 136 l~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+++.+.++++++||..+.... +.+..|..+|..+..+.+
T Consensus 129 ~~~m~~~~~g~ii~~ss~~~~~~~----~~~~~Y~asKaal~~ltk 170 (274)
T d1xhla_ 129 KEHLIKTKGEIVNVSSIVAGPQAH----SGYPYYACAKAALDQYTR 170 (274)
T ss_dssp HHHHHHTTCEEEEECCGGGSSSCC----TTSHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhhhhccccC----CCCceehhhhhHHHHHHH
Confidence 666677776788887776654321 223346667777766555
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.54 E-value=5.4e-15 Score=112.56 Aligned_cols=130 Identities=18% Similarity=0.111 Sum_probs=91.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|||+|||||||||++|+++|.++|++|++++|++ .|+.+++++++.++..
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~--------------- 51 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK--------------- 51 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHc---------------
Confidence 6799999999999999999999999999998863 3677777777777643
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-------CcceehhhHHHHHHHHHHCCccEEEEeccce
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-------PTTVMSEGMKNIVTAMKEYNVSVVSVCLSAF 154 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-------~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~ 154 (189)
++|+++|+++...... ....|.....++.+.+...+ ..+++.||..
T Consensus 52 --------------------------~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~ 104 (281)
T d1vl0a_ 52 --------------------------KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDY 104 (281)
T ss_dssp --------------------------CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGG
T ss_pred --------------------------CCCEEEeeccccccccccccchhhccccccccccccccccccc-ccccccccce
Confidence 3466777766544221 12345666777777777765 4677777776
Q ss_pred eecCCCC-------CCCCCccchhhHHHHHHHhhhcCCCCC
Q psy3626 155 LFYEPSK-------VPPMFHNVNDDHQRMYNVLKDSGLNYI 188 (189)
Q Consensus 155 ~~~~~~~-------~p~~~~~~~~~~~~~~~~l~~~~~~~t 188 (189)
++..... .+.+...|...+...++++++.+.+++
T Consensus 105 v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~~ 145 (281)
T d1vl0a_ 105 VFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYY 145 (281)
T ss_dssp GSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEE
T ss_pred eeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCcc
Confidence 6554321 234455566778888888887776654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.53 E-value=1.2e-15 Score=115.61 Aligned_cols=139 Identities=12% Similarity=0.018 Sum_probs=99.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
+++||||+++||+.+++.|+++|++|.+.+|+.+..+++......+..+|++++++++++++.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~----------------- 64 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEA----------------- 64 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHH-----------------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHH-----------------
Confidence 689999999999999999999999999999987766544333334567788887777766643
Q ss_pred ccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-c-----------ceehhh----HHHHHHHHHHCCccE
Q psy3626 83 SEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-T-----------TVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-~-----------~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
+.+.+++.|++|+++|......+ . ++|..+ ++.+++.+++++.++
T Consensus 65 -------------------~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~ 125 (252)
T d1zmta1 65 -------------------VTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGH 125 (252)
T ss_dssp -------------------HHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred -------------------HHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccce
Confidence 46677899999999886433211 1 244444 455666677777789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||..+.... +....|..+|..+..+.+
T Consensus 126 IV~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 156 (252)
T d1zmta1 126 IIFITSATPFGPW----KELSTYTSARAGACTLAN 156 (252)
T ss_dssp EEEECCSTTTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred eeccccccccccc----ccccccccccccHHHHHH
Confidence 9999998765422 223356777777765555
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=8.5e-15 Score=113.43 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=97.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----------cCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----------YHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|+++||||+++||+++++.|+++|++|++.+|+++++.+. ...++..+.+|++++++++++++.+
T Consensus 13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~---- 88 (297)
T d1yxma1 13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST---- 88 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH----
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH----
Confidence 6899999999999999999999999999999986544321 2346788889999999888877543
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHH----H
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKN----I 135 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~----l 135 (189)
.+.+++.|++|+++|.....+.. ++|+.++.. +
T Consensus 89 --------------------------------~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~ 136 (297)
T d1yxma1 89 --------------------------------LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAV 136 (297)
T ss_dssp --------------------------------HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred --------------------------------HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHH
Confidence 56678899999999876544322 366666544 4
Q ss_pred HHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 136 VTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 136 l~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+++.+.+++|.+||..... .| ....|..+|..++.+.+
T Consensus 137 ~~~m~~~~~g~Ii~~ss~~~~~----~~-~~~~Y~asKaal~~ltk 177 (297)
T d1yxma1 137 YSSWMKEHGGSIVNIIVPTKAG----FP-LAVHSGAARAGVYNLTK 177 (297)
T ss_dssp HHHTHHHHCEEEEEECCCCTTC----CT-TCHHHHHHHHHHHHHHH
T ss_pred HHhhcccccccccccccccccc----cc-ccccchhHHHHHHHHHH
Confidence 4455556567888776643211 22 23345566777665555
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.53 E-value=7.6e-15 Score=112.34 Aligned_cols=139 Identities=15% Similarity=0.087 Sum_probs=95.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+++||||+++||+++++.|+++|++|++.+|+++++++. ...++..+.+|++++++++++++.
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~------- 78 (272)
T d1xkqa_ 6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS------- 78 (272)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH-------
T ss_pred CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHH-------
Confidence 6899999999999999999999999999999987655432 123577889999999988887754
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---------------cceehhhH----H
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---------------TTVMSEGM----K 133 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---------------~~~~~~~~----~ 133 (189)
+.+.+++.|++|+++|...+... .++|+.+. +
T Consensus 79 -----------------------------~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~ 129 (272)
T d1xkqa_ 79 -----------------------------TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTK 129 (272)
T ss_dssp -----------------------------HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred -----------------------------HHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHH
Confidence 35667889999999987543211 12455554 4
Q ss_pred HHHHHHHHCCccEEEEecc-ceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 134 NIVTAMKEYNVSVVSVCLS-AFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 134 ~ll~~~~~~~~~~~i~iSS-~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+++.+ +.+|+++| ..+... . +....|..+|..+..+.+
T Consensus 130 ~~~p~m~~~~-g~iI~~~Ss~a~~~~---~-~~~~~Y~asKaal~~ltk 173 (272)
T d1xkqa_ 130 KVKPHLVASK-GEIVNVSSIVAGPQA---Q-PDFLYYAIAKAALDQYTR 173 (272)
T ss_dssp HHHHHHHHHT-CEEEEECCGGGSSSC---C-CSSHHHHHHHHHHHHHHH
T ss_pred hhcccccccC-CccccccchhccccC---C-CCcchhhhHHHHHHHHHH
Confidence 4555565554 34555555 443322 1 123346666777665554
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.52 E-value=5.9e-15 Score=112.48 Aligned_cols=139 Identities=16% Similarity=0.095 Sum_probs=93.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---------cCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|.++||||+++||++++++|+++|++|++.+|+++.+++. ...++.++.+|++++++++++++.
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~------- 78 (264)
T d1spxa_ 6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST------- 78 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH-------
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHH-------
Confidence 6799999999999999999999999999999987655432 123578889999999988887754
Q ss_pred cccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------C-------cceehhhH----H
Q psy3626 73 TLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------P-------TTVMSEGM----K 133 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------~-------~~~~~~~~----~ 133 (189)
+.+.+++.|++|+++|...+.. . .++|+.+. +
T Consensus 79 -----------------------------~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~ 129 (264)
T d1spxa_ 79 -----------------------------TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK 129 (264)
T ss_dssp -----------------------------HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred -----------------------------HHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHh
Confidence 3566788999999998643211 0 12455554 5
Q ss_pred HHHHHHHHCCccEEEEeccce-eecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 134 NIVTAMKEYNVSVVSVCLSAF-LFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 134 ~ll~~~~~~~~~~~i~iSS~~-~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++.+++.+ +++|+++|.. +.... +....|..+|...+.+.+
T Consensus 130 ~~~p~m~~~~-g~iI~~~S~~~~~~~~----~~~~~Y~asKaal~~lt~ 173 (264)
T d1spxa_ 130 KAVPHLSSTK-GEIVNISSIASGLHAT----PDFPYYSIAKAAIDQYTR 173 (264)
T ss_dssp HHHHHHHHHT-CEEEEECCTTSSSSCC----TTSHHHHHHHHHHHHHHH
T ss_pred hhCCcccccc-CcceeeeeeccccccC----CCchhhhhhhhhHHHHHH
Confidence 5566666655 4555555554 33221 223346667777665554
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.51 E-value=6.3e-14 Score=106.14 Aligned_cols=140 Identities=14% Similarity=0.132 Sum_probs=100.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEecccc-ChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVL-KLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~ 73 (189)
|+++||||+++||++++++|+++|.+|+++.|+.+....+ ...++.++.+|++ +.+++++.++.
T Consensus 6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-------- 77 (254)
T d1sbya1 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK-------- 77 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH--------
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHH--------
Confidence 6899999999999999999999999999998887654322 1246788888987 45566666543
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC---cceehhhHHHH----HHHHHHC---C
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP---TTVMSEGMKNI----VTAMKEY---N 143 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~---~~~~~~~~~~l----l~~~~~~---~ 143 (189)
+.+.++++|++|++||......- .++|..++.++ ++.+.+. .
T Consensus 78 ----------------------------~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~ 129 (254)
T d1sbya1 78 ----------------------------IFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGP 129 (254)
T ss_dssp ----------------------------HHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC
T ss_pred ----------------------------HHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCC
Confidence 45667889999999997654422 35777765554 4455443 2
Q ss_pred ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 144 VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 144 ~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+++|++||..+.... +.+..|..+|.....+.+
T Consensus 130 ~g~Ii~isS~~~~~~~----~~~~~Y~asKaal~~~t~ 163 (254)
T d1sbya1 130 GGIIANICSVTGFNAI----HQVPVYSASKAAVVSFTN 163 (254)
T ss_dssp CEEEEEECCGGGTSCC----TTSHHHHHHHHHHHHHHH
T ss_pred CceEEEEechhhccCC----CCCHHHHHHHHHHHHHHH
Confidence 4789999998876432 233457777777765554
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.51 E-value=9.3e-14 Score=105.24 Aligned_cols=137 Identities=13% Similarity=0.121 Sum_probs=97.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcc---------cCCceeEEeccccChhHHHHhhhcCcceee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSE---------YHSKVEIIQGDVLKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 71 (189)
.+++||||+|+||++++++|+++|+ +|+++.|+..+.+.. .+.++.++.+|++++++++++++....
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~--- 86 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD--- 86 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc---
Confidence 3799999999999999999999998 478888874433221 235678888888888888887765421
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHH
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMK 140 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~ 140 (189)
..+.|.+++++|....... ...|+.+..++.++++
T Consensus 87 ----------------------------------~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~ 132 (259)
T d2fr1a1 87 ----------------------------------DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR 132 (259)
T ss_dssp ----------------------------------TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred ----------------------------------cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhh
Confidence 1245778888886654432 2367778888888888
Q ss_pred HCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHH
Q psy3626 141 EYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNV 179 (189)
Q Consensus 141 ~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~ 179 (189)
..+.+++|++||..+....+. ...|...|..++.+
T Consensus 133 ~~~~~~iv~~SS~a~~~g~~~----~~~YaAaka~l~~l 167 (259)
T d2fr1a1 133 ELDLTAFVLFSSFASAFGAPG----LGGYAPGNAYLDGL 167 (259)
T ss_dssp TSCCSEEEEEEEHHHHTCCTT----CTTTHHHHHHHHHH
T ss_pred ccCCceEeeecchhhccCCcc----cHHHHHHHHhHHHH
Confidence 877889999999988764332 22466666555433
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=3.6e-14 Score=110.08 Aligned_cols=140 Identities=16% Similarity=0.050 Sum_probs=97.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc------------cCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE------------YHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|+++||||+++||+++++.|+++|++|++.+|+.+..... .......+.+|+.+.+++++.++
T Consensus 8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~----- 82 (302)
T d1gz6a_ 8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK----- 82 (302)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH-----
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH-----
Confidence 5799999999999999999999999999998876543211 01223345556666655554443
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHH
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKN 134 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ 134 (189)
.+.+.+++.|++|+++|.....+.. ++|+.+ ++.
T Consensus 83 -------------------------------~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~ 131 (302)
T d1gz6a_ 83 -------------------------------TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRA 131 (302)
T ss_dssp -------------------------------HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHH
Confidence 2356677899999999976654322 256665 455
Q ss_pred HHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 135 IVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.|++++.++||++||..+....+ ....|..+|..+..+.+
T Consensus 132 ~~p~m~~~~~G~IV~isS~~~~~~~~----~~~~Y~asKaal~~lt~ 174 (302)
T d1gz6a_ 132 AWDHMKKQNYGRIIMTASASGIYGNF----GQANYSAAKLGLLGLAN 174 (302)
T ss_dssp HHHHHHHHTCEEEEEECCHHHHHCCT----TCHHHHHHHHHHHHHHH
T ss_pred hHHHHHhCCCcEEEEeCChhhcCCCC----CcHHHHHHHHHHHHHHH
Confidence 66667777778999999998765322 23457777777766555
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.49 E-value=3.8e-14 Score=107.72 Aligned_cols=144 Identities=18% Similarity=0.129 Sum_probs=98.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||++++++|+++|++|++.+|+++++.+. ...++..+.+|++++++++++++.+
T Consensus 10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~-------- 81 (260)
T d1h5qa_ 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI-------- 81 (260)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH--------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH--------
Confidence 6899999999999999999999999999999998776432 2356788999999999988888543
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhH----HHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGM----KNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~----~~ll~~~ 139 (189)
.+.+++.|++|+++|.....+.. ++|+.+. +.+++.+
T Consensus 82 ----------------------------~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m 133 (260)
T d1h5qa_ 82 ----------------------------DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLW 133 (260)
T ss_dssp ----------------------------HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccc
Confidence 56677899999999876544322 2555554 4445555
Q ss_pred HH-CCccEEEEeccceeecCCCC---CCCCCccchhhHHHHHHHhh
Q psy3626 140 KE-YNVSVVSVCLSAFLFYEPSK---VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~-~~~~~~i~iSS~~~~~~~~~---~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+ .+.++++.++|......... ..+....|...|.....+.+
T Consensus 134 ~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~ 179 (260)
T d1h5qa_ 134 LQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 179 (260)
T ss_dssp HHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHH
T ss_pred cccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHH
Confidence 43 34456666666544321110 01123346666777665554
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.48 E-value=5.6e-14 Score=105.16 Aligned_cols=131 Identities=18% Similarity=0.130 Sum_probs=89.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+++||||+++||+++++.|+++|++|++.+|+++.+.+ ...+++.+|+++.
T Consensus 5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~---~~~~~~~~Dv~~~------------------------- 56 (234)
T d1o5ia_ 5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR---SGHRYVVCDLRKD------------------------- 56 (234)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---TCSEEEECCTTTC-------------------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh---cCCcEEEcchHHH-------------------------
Confidence 689999999999999999999999999999998654433 2334556666532
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHHHHCCccE
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAMKEYNVSV 146 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~~~~~~~~ 146 (189)
.+.+.+.+++.|++|+++|.....+.. ++|..+ ++.+++.+++.+.++
T Consensus 57 -----------------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ 119 (234)
T d1o5ia_ 57 -----------------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGR 119 (234)
T ss_dssp -----------------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred -----------------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccc
Confidence 234456667788888888865433221 244444 456666777777789
Q ss_pred EEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 147 VSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 147 ~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+|++||...... .+....|..+|..++.+.+
T Consensus 120 ii~i~S~~~~~~----~~~~~~Y~asKaal~~ltk 150 (234)
T d1o5ia_ 120 IVAITSFSVISP----IENLYTSNSARMALTGFLK 150 (234)
T ss_dssp EEEECCGGGTSC----CTTBHHHHHHHHHHHHHHH
T ss_pred cccccccccccc----ccccccchhHHHHHHHHHH
Confidence 999998875432 1223345566777665554
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=7.7e-14 Score=105.11 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=94.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-CCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|+++||||++.||+++++.|+++|++|++.+|+++++++.. ...+....+|+.+.+.++...
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~----------------- 69 (245)
T d2ag5a1 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFA----------------- 69 (245)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHH-----------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccc-----------------
Confidence 57999999999999999999999999999999976665542 345666777776665544433
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcc-----------eehhhH----HHHHHHHHHCCcc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTT-----------VMSEGM----KNIVTAMKEYNVS 145 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~-----------~~~~~~----~~ll~~~~~~~~~ 145 (189)
+.+.+.|++|+++|.....+..+ +|..++ +.+++.+.+.+.+
T Consensus 70 -----------------------~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g 126 (245)
T d2ag5a1 70 -----------------------NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG 126 (245)
T ss_dssp -----------------------HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred -----------------------cccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCc
Confidence 33456788899888766543322 455554 4445555666668
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKD 182 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~ 182 (189)
++|++||..+... .......|...|...+.+.+.
T Consensus 127 ~Ii~isS~~~~~~---~~~~~~~Y~~sKaal~~l~r~ 160 (245)
T d2ag5a1 127 NIINMSSVASSVK---GVVNRCVYSTTKAAVIGLTKS 160 (245)
T ss_dssp EEEEECCSBTTTB---CCTTBHHHHHHHHHHHHHHHH
T ss_pred eeeeeechhhccC---CccchhHHHHHHHHHHHHHHH
Confidence 9999998765221 113344567777777766663
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.47 E-value=1.2e-14 Score=109.33 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=96.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||+++++.|+++|++|++.+|+.+++.+. .+.++.++++|+++++++++.++.
T Consensus 6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~------------- 72 (241)
T d2a4ka1 6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAE------------- 72 (241)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHH-------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHH-------------
Confidence 6899999999999999999999999999999987655432 346678889999999998888754
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHHHHHHHHH--CCcc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKNIVTAMKE--YNVS 145 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~ll~~~~~--~~~~ 145 (189)
+.+.+++.|++|+++|.....+.. ++|..+...+.+++.. .+.+
T Consensus 73 -----------------------i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~ 129 (241)
T d2a4ka1 73 -----------------------ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGG 129 (241)
T ss_dssp -----------------------HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred -----------------------HHHHhCCccEeccccccccccchhhhhcccccccccccccccccccccccccccccc
Confidence 356678899999999876544322 2555555555555432 2334
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.++++||..... ++.+..|...|...+.+.+
T Consensus 130 ~i~~~ss~a~~~-----~~~~~~Y~~sK~al~~lt~ 160 (241)
T d2a4ka1 130 SLVLTGSVAGLG-----AFGLAHYAAGKLGVVGLAR 160 (241)
T ss_dssp EEEEECCCTTCC-----HHHHHHHHHCSSHHHHHHH
T ss_pred ceeecccccccc-----ccCccccchhhHHHHHHHH
Confidence 555555554321 1223346666666665554
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.46 E-value=2.7e-13 Score=102.23 Aligned_cols=144 Identities=11% Similarity=0.056 Sum_probs=95.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
|+|+||||+++||++++++|+++|+ .|++.+|+++++.++ ...++.++.+|++++++++++++..
T Consensus 4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i---------- 73 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV---------- 73 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHH----------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHH----------
Confidence 5899999999999999999999985 688889988776543 3467889999999999988877543
Q ss_pred CCCCCCccccCceeEEeccccCHHHHHHHhc--CCCEEEEeeccCCCCCC------------cceehhhHHH----HHHH
Q psy3626 77 DPQRLPSEYHSKVEIIQGDVLKLADVKKAIE--GKDGVVVALGTRNDLSP------------TTVMSEGMKN----IVTA 138 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vv~~~~~~~~~~~------------~~~~~~~~~~----ll~~ 138 (189)
.+.++ +.|++|+++|...+..+ .++|+.++.. +++.
T Consensus 74 --------------------------~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 127 (250)
T d1yo6a1 74 --------------------------GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPL 127 (250)
T ss_dssp --------------------------HHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred --------------------------HHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 33333 38999999986443211 2366666544 4555
Q ss_pred HHHCC-----------ccEEEEeccceeecCCCC---CCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEYN-----------VSVVSVCLSAFLFYEPSK---VPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~~-----------~~~~i~iSS~~~~~~~~~---~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.+ ..+++.+|+.......+. ...+...|..+|.....+.+
T Consensus 128 l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~ 184 (250)
T d1yo6a1 128 LKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGR 184 (250)
T ss_dssp HHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHH
Confidence 54431 246777777654432211 11223346666766655444
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.45 E-value=1.8e-13 Score=104.47 Aligned_cols=141 Identities=13% Similarity=0.007 Sum_probs=97.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Cc------ccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PS------EYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||+++++.|+++|++|++.+|+.+.. +. ....++.++.+|+++++++++.++.
T Consensus 19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~--------- 89 (272)
T d1g0oa_ 19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE--------- 89 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHH---------
Confidence 6899999999999999999999999999998875432 11 1235678888999999998888754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~ll~~~~~~- 142 (189)
+.+.+++.|++|+++|.....+.. ++|+.+...+.+++...
T Consensus 90 ---------------------------~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m 142 (272)
T d1g0oa_ 90 ---------------------------AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL 142 (272)
T ss_dssp ---------------------------HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS
T ss_pred ---------------------------HHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccc
Confidence 356778899999999876544322 35666665555555431
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.-+++++++|..+... .++....|...|..++.+.+
T Consensus 143 ~~~g~~i~i~s~~~~~~---~~~~~~~Y~asKaal~~ltk 179 (272)
T d1g0oa_ 143 EIGGRLILMGSITGQAK---AVPKHAVYSGSKGAIETFAR 179 (272)
T ss_dssp CTTCEEEEECCGGGTCS---SCSSCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccc---cccchhhHHHHHHHHHHHHH
Confidence 2357777777654321 22333345566766665554
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=5.7e-13 Score=102.41 Aligned_cols=138 Identities=17% Similarity=0.030 Sum_probs=93.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEec---CCCCCCcc---------cCCceeEEeccccChhHHHHhhhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLR---DPQRLPSE---------YHSKVEIIQGDVLKLADVKKAIEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r---~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 69 (189)
|.++||||+++||++++++|+++|.+|+.+.+ +.+....+ ...++..+.+|++++++++++++.+.
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-- 80 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-- 80 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc--
Confidence 45789999999999999999999988665543 32222111 23467778888888888877776541
Q ss_pred eeecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHH
Q psy3626 70 EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKN 134 (189)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ 134 (189)
-++.|++++++|........ ++|+.+ ++.
T Consensus 81 ------------------------------------~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~ 124 (285)
T d1jtva_ 81 ------------------------------------EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124 (285)
T ss_dssp ------------------------------------TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ------------------------------------ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHH
Confidence 13578899998876544322 256665 555
Q ss_pred HHHHHHHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 135 IVTAMKEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 135 ll~~~~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++.|++++.+++|++||..+.... +....|..+|..++.+.+
T Consensus 125 ~lp~m~~~~~G~Iv~isS~~g~~~~----~~~~~Y~asKaal~~l~~ 167 (285)
T d1jtva_ 125 FLPDMKRRGSGRVLVTGSVGGLMGL----PFNDVYCASKFALEGLCE 167 (285)
T ss_dssp HHHHHHHHTCEEEEEEEEGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCceEEEechhhcCCC----CCchHHHHHHHHHHHHHH
Confidence 6777788777899999999875432 223356667777665544
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1.1e-13 Score=105.50 Aligned_cols=139 Identities=17% Similarity=0.119 Sum_probs=97.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||++++++|+++|++|++++|+++.+++. .......+.+|..+.+.++...+.
T Consensus 15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------- 85 (269)
T d1xu9a_ 15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQ--------- 85 (269)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHH---------
Confidence 6899999999999999999999999999999997766532 234566777788777766655533
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhh----HHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEG----MKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~----~~~ll~~~ 139 (189)
+.+..+..|++++++|........ ++|..+ ++.+++.+
T Consensus 86 ---------------------------~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m 138 (269)
T d1xu9a_ 86 ---------------------------AGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPML 138 (269)
T ss_dssp ---------------------------HHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHH
Confidence 345566788899888865543221 245544 45556666
Q ss_pred HHCCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEYNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
++.+ +++|++||..+.... +....|..+|..++.+.+
T Consensus 139 ~~~~-G~ii~isS~~~~~~~----p~~~~Y~asKaal~~~~~ 175 (269)
T d1xu9a_ 139 KQSN-GSIVVVSSLAGKVAY----PMVAAYSASKFALDGFFS 175 (269)
T ss_dssp HHHT-CEEEEEEEGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HhcC-CcceEeccchhcCCC----CCchHHHHHHHHHHHHHH
Confidence 5544 689999998875432 234457777777665554
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.44 E-value=7.6e-14 Score=105.92 Aligned_cols=141 Identities=13% Similarity=0.025 Sum_probs=94.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-Ccc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+++||+++++.|+++|++|++..|+.+.. +.. ...++..+.+|+++++++++.++.
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~--------- 77 (259)
T d1ja9a_ 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK--------- 77 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHH---------
Confidence 6899999999999999999999999999876654332 211 235678899999999988887754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----------ceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----------TVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----------~~~~~~~~~ll~~~~~~- 142 (189)
+.+.+++.|++|+++|.....+.. ++|+.+..++.+.+...
T Consensus 78 ---------------------------~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m 130 (259)
T d1ja9a_ 78 ---------------------------AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC 130 (259)
T ss_dssp ---------------------------HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHE
T ss_pred ---------------------------HHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhh
Confidence 356677899999999976544332 25666555555544331
Q ss_pred -CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 143 -NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 143 -~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.-+++++++|..+... ..| .+..|...|...+.+.+
T Consensus 131 ~~~g~~iii~s~~~~~~--~~~-~~~~Y~asK~al~~l~r 167 (259)
T d1ja9a_ 131 RRGGRIILTSSIAAVMT--GIP-NHALYAGSKAAVEGFCR 167 (259)
T ss_dssp EEEEEEEEECCGGGTCC--SCC-SCHHHHHHHHHHHHHHH
T ss_pred hcCCccccccccccccc--CCC-CchhHHHHHHHHHHHHH
Confidence 2246666666544221 122 23346666777666555
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.41 E-value=6.2e-13 Score=99.33 Aligned_cols=138 Identities=13% Similarity=0.077 Sum_probs=89.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
.||+||||+++||++++++|+++|++|++++|++.... .......+|..+.+......+.
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---------------- 62 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQ---------------- 62 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHH----------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHH----------------
Confidence 47999999999999999999999999999999876443 2223444555554443333222
Q ss_pred CccccCceeEEeccccCHHHHHH--HhcCCCEEEEeeccCCCCCC------------cceehhhHHHHHHHHHHC--Ccc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKK--AIEGKDGVVVALGTRNDLSP------------TTVMSEGMKNIVTAMKEY--NVS 145 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~ll~~~~~~--~~~ 145 (189)
+.. ..++.|++|+++|......+ .++|+.++..+.+.+... ..+
T Consensus 63 --------------------~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g 122 (235)
T d1ooea_ 63 --------------------TASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGG 122 (235)
T ss_dssp --------------------HHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred --------------------HHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccce
Confidence 122 23568999999985432211 235566655555555432 236
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhhc
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDS 183 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~ 183 (189)
++|++||..+.... +....|..+|..++.+.+..
T Consensus 123 ~Iv~isS~~~~~~~----~~~~~Y~asKaal~~l~~~l 156 (235)
T d1ooea_ 123 LLQLTGAAAAMGPT----PSMIGYGMAKAAVHHLTSSL 156 (235)
T ss_dssp EEEEECCGGGGSCC----TTBHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccHHhcCCc----ccccchHHHHHHHHHHHHHH
Confidence 99999998766532 23446777788877776643
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.39 E-value=9.8e-14 Score=105.04 Aligned_cols=140 Identities=15% Similarity=0.133 Sum_probs=96.9
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+| +||++++++|+++|++|.+.+|++...... ...+..++++|++++++++++++.
T Consensus 9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--------- 79 (256)
T d1ulua_ 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAG--------- 79 (256)
T ss_dssp CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHH---------
Confidence 5799999987 799999999999999998888875432211 124567888999999988887754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC----C-----------CcceehhhHHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL----S-----------PTTVMSEGMKNIVTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~----~-----------~~~~~~~~~~~ll~~~ 139 (189)
+.+.+++.|++|+++|..... . ..++|..+...+.+.+
T Consensus 80 ---------------------------~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 132 (256)
T d1ulua_ 80 ---------------------------VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (256)
T ss_dssp ---------------------------HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ---------------------------HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHH
Confidence 356678899999999864311 0 1135555666666555
Q ss_pred HHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
... .-+++|++||..+.... +.+..|..+|..++.+.+
T Consensus 133 ~~~~~~~G~Iv~isS~~~~~~~----~~~~~Y~asKaal~~ltr 172 (256)
T d1ulua_ 133 EPLLREGGGIVTLTYYASEKVV----PKYNVMAIAKAALEASVR 172 (256)
T ss_dssp TTTEEEEEEEEEEECGGGTSBC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEeehHhcCCC----CCchHHHHHHHHHHHHHH
Confidence 432 23689999998775432 233456677777766655
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=3.2e-13 Score=103.25 Aligned_cols=118 Identities=16% Similarity=0.102 Sum_probs=89.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCCcc------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLPSE------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+.++||||+++||++++++|+++ |++|++.+|+++++++. ...++.++.+|++++++++++++.
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~--------- 74 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF--------- 74 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH---------
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHH---------
Confidence 34589999999999999999986 89999999998765432 235678899999999998887754
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----------cceehhhHHHHHHHHHHC-
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----------TTVMSEGMKNIVTAMKEY- 142 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----------~~~~~~~~~~ll~~~~~~- 142 (189)
+.+.+++.|++|++||....... .++|+.++..+.+.+...
T Consensus 75 ---------------------------~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m 127 (275)
T d1wmaa1 75 ---------------------------LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 127 (275)
T ss_dssp ---------------------------HHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred ---------------------------HHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667789999999997654322 236777777766666432
Q ss_pred -CccEEEEecccee
Q psy3626 143 -NVSVVSVCLSAFL 155 (189)
Q Consensus 143 -~~~~~i~iSS~~~ 155 (189)
.-+++|.+||..+
T Consensus 128 ~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 128 KPQGRVVNVSSIMS 141 (275)
T ss_dssp EEEEEEEEECCHHH
T ss_pred HhcCCcccccccce
Confidence 2369999999755
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.37 E-value=2.6e-12 Score=95.99 Aligned_cols=141 Identities=9% Similarity=0.016 Sum_probs=89.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
|+|+||||+|+||+++++.|+++|++|.++++.+.... ........+..+.++.+...+.
T Consensus 3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---------------- 62 (236)
T d1dhra_ 3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAE---------------- 62 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHH----------------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHH----------------
Confidence 79999999999999999999999999999988765432 2233445555555444433322
Q ss_pred CccccCceeEEeccccCHHHHHHHh--cCCCEEEEeeccCCCCCC------------cceehhhHHHHHHHHHH--CCcc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAI--EGKDGVVVALGTRNDLSP------------TTVMSEGMKNIVTAMKE--YNVS 145 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vv~~~~~~~~~~~------------~~~~~~~~~~ll~~~~~--~~~~ 145 (189)
+.+.+ ++.|++|+++|....... .++|..+..++.+.+.. .+.+
T Consensus 63 --------------------~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G 122 (236)
T d1dhra_ 63 --------------------VGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 122 (236)
T ss_dssp --------------------HHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred --------------------HHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccccc
Confidence 12222 247889999885322111 13555555555555443 2347
Q ss_pred EEEEeccceeecCCCCCCCCCccchhhHHHHHHHhhhcCCC
Q psy3626 146 VVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLKDSGLN 186 (189)
Q Consensus 146 ~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~ 186 (189)
++|++||..+.... +.+..|..+|..+..+.+....+
T Consensus 123 ~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~~la~E 159 (236)
T d1dhra_ 123 LLTLAGAKAALDGT----PGMIGYGMAKGAVHQLCQSLAGK 159 (236)
T ss_dssp EEEEECCGGGGSCC----TTBHHHHHHHHHHHHHHHHHTST
T ss_pred ceeEEccHHHcCCc----cCCcccHHHHHHHHHHHHHHHHH
Confidence 99999998875432 23445777788777777644433
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.36 E-value=8.9e-13 Score=101.53 Aligned_cols=140 Identities=13% Similarity=0.018 Sum_probs=94.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc-------cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+|+||++++++|+++|++|++.+|+.+++.+. .......+.+|+++++++++.++.
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~--------- 96 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE--------- 96 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhh---------
Confidence 6899999999999999999999999999999987654322 235567888888888887776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcc-----------eehhhHHHH----HHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTT-----------VMSEGMKNI----VTAM 139 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~-----------~~~~~~~~l----l~~~ 139 (189)
+.+..++.|++|+++|......... +|......+ +..+
T Consensus 97 ---------------------------~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 149 (294)
T d1w6ua_ 97 ---------------------------LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQL 149 (294)
T ss_dssp ---------------------------HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------hhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccc
Confidence 3566778999999999765543221 333332222 2222
Q ss_pred HH-CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 140 KE-YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 140 ~~-~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.. .+.+.++.++|..+.... +....|...|..++.+.+
T Consensus 150 ~~~~~~~~i~~~ss~~~~~~~----~~~~~YsasKaal~~ltk 188 (294)
T d1w6ua_ 150 IKAQKGAAFLSITTIYAETGS----GFVVPSASAKAGVEAMSK 188 (294)
T ss_dssp HHTTCCEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhcc----cccchHHHHHHHHHHHHH
Confidence 33 344567777776654422 223346667777665555
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.31 E-value=1.4e-12 Score=98.83 Aligned_cols=144 Identities=13% Similarity=-0.012 Sum_probs=93.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHH---cCCcEEEEecCCCCCCcc--------cCCceeEEeccccChhHHHHhhhcCccee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK---QGLEVCTLLRDPQRLPSE--------YHSKVEIIQGDVLKLADVKKAIEGKDGLE 70 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 70 (189)
|.++||||+++||++++++|.+ +|++|++++|+++.++++ ...++..+.+|++++++++++++.+....
T Consensus 7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~ 86 (259)
T d1oaaa_ 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence 5789999999999999999976 699999999987765532 12357788888888888877765431100
Q ss_pred eecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC--------------CcceehhhHHHHH
Q psy3626 71 VCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS--------------PTTVMSEGMKNIV 136 (189)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~--------------~~~~~~~~~~~ll 136 (189)
.......|++++++|...+.. ..++|+.+...+.
T Consensus 87 --------------------------------~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~ 134 (259)
T d1oaaa_ 87 --------------------------------RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLT 134 (259)
T ss_dssp --------------------------------CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHH
T ss_pred --------------------------------hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHH
Confidence 000123567888877543211 1236777766665
Q ss_pred HHHH----HCC--ccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 137 TAMK----EYN--VSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 137 ~~~~----~~~--~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+++. +.+ .+++|++||..+.... +....|..+|..+..+.+
T Consensus 135 ~~~~~~m~~~~~~~g~Iv~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 181 (259)
T d1oaaa_ 135 SGTLNAFQDSPGLSKTVVNISSLCALQPY----KGWGLYCAGKAARDMLYQ 181 (259)
T ss_dssp HHHHHTSCCCTTCEEEEEEECCGGGTSCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcccccccccccccCCC----ccchHHHHHHHHHHHHHH
Confidence 5553 333 4689999998775421 223456667777665554
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.28 E-value=8.1e-12 Score=95.38 Aligned_cols=138 Identities=10% Similarity=0.039 Sum_probs=81.1
Q ss_pred EEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
|+||||+||||++++++|+++|+ +|+++++-....... ........|..+.+.+......
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----------------- 62 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV--NLVDLNIADYMDKEDFLIQIMA----------------- 62 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH--HHHTSCCSEEEEHHHHHHHHHT-----------------
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhh--cccccchhhhccchHHHHHHhh-----------------
Confidence 89999999999999999999996 688876432211110 0011111222222221111111
Q ss_pred ccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEeccceeec
Q psy3626 83 SEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLSAFLFY 157 (189)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~~~ 157 (189)
...+..++++++.++....... ...++.++.+++++++..+++ +++.||+.++.
T Consensus 63 --------------------~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~ 121 (307)
T d1eq2a_ 63 --------------------GEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYG 121 (307)
T ss_dssp --------------------TCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGT
T ss_pred --------------------hhcccchhhhhhhccccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 1122346777777764443322 246788899999999999876 55556665554
Q ss_pred CCCCC-------CCCCccchhhHHHHHHHhh
Q psy3626 158 EPSKV-------PPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 158 ~~~~~-------p~~~~~~~~~~~~~~~~l~ 181 (189)
+.... +.+...|...|...|.+++
T Consensus 122 ~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~ 152 (307)
T d1eq2a_ 122 GRTSDFIESREYEKPLNVYGYSKFLFDEYVR 152 (307)
T ss_dssp TCCSCBCSSGGGCCCSSHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhhhcc
Confidence 43221 2344567778888887776
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=1.4e-11 Score=92.36 Aligned_cols=140 Identities=16% Similarity=0.057 Sum_probs=90.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc---cCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE---YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|+++||||+++||++++++|+++|++|++++|+.+.++.+ ..........|+.+.+.++......
T Consensus 6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------ 73 (248)
T d2o23a1 6 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALA------------ 73 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH------------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccc------------
Confidence 6899999999999999999999999999999998776543 2345667777777766655544322
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC------C-----------CcceehhhHHHHHHHHHH
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL------S-----------PTTVMSEGMKNIVTAMKE 141 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~------~-----------~~~~~~~~~~~ll~~~~~ 141 (189)
.......|..+++++..... + ..++|+.++.++.+++..
T Consensus 74 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 129 (248)
T d2o23a1 74 ------------------------KGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAG 129 (248)
T ss_dssp ------------------------HHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ------------------------ccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHH
Confidence 22333445555544322111 0 013566665555555422
Q ss_pred ----------CCccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 142 ----------YNVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 142 ----------~~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
.+.+++|++||..+.... +.+..|..+|...+.+.+
T Consensus 130 ~~~~~~~~~~~~~G~Ii~isS~~~~~~~----~~~~~Y~asKaal~~lt~ 175 (248)
T d2o23a1 130 EMGQNEPDQGGQRGVIINTASVAAFEGQ----VGQAAYSASKGGIVGMTL 175 (248)
T ss_dssp HHTTSCCCTTSCCEEEEEECCTHHHHCC----TTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhccCCceEEEEecchhhccCC----CCchHHHHHHHHHHHHHH
Confidence 134689999999876532 223457777777766655
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.19 E-value=3.3e-11 Score=91.82 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=32.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+.++||||+++||+++++.|+++|++|++.+|+.
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~ 36 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS 36 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 67899999999999999999999999999887764
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.08 E-value=1e-10 Score=88.77 Aligned_cols=83 Identities=18% Similarity=0.105 Sum_probs=64.0
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+| +||+++++.|+++|++|++.+|++...... ......+..+|+++++++++.++.
T Consensus 6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~--------- 76 (274)
T d2pd4a1 6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNS--------- 76 (274)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHH---------
Confidence 6899999877 799999999999999999999985422211 124556788888888887776643
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCC
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRN 120 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~ 120 (189)
+.+.+++.|++|+++|...
T Consensus 77 ---------------------------~~~~~g~id~lV~nag~~~ 95 (274)
T d2pd4a1 77 ---------------------------VKKDLGSLDFIVHSVAFAP 95 (274)
T ss_dssp ---------------------------HHHHTSCEEEEEECCCCCC
T ss_pred ---------------------------HHHHcCCCCeEEeeccccc
Confidence 3456778999999988654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.08 E-value=3.1e-10 Score=84.24 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=47.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIE 64 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 64 (189)
|+++||||+++||++++++|+++|++|++.+|+++.. +...+.+|+.+.........
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~~ 58 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE------DLIYVEGDVTREEDVRRAVA 58 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS------SSEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc------cceEeeccccchhhhHHHHH
Confidence 6899999999999999999999999999999987543 34567888888766555543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=9.4e-11 Score=88.17 Aligned_cols=140 Identities=14% Similarity=0.096 Sum_probs=88.4
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCCcc-----cCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLPSE-----YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++||||+| +||+++++.|+++|++|++.+|++...... .......+..|..+..+++..++.
T Consensus 6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 76 (258)
T d1qsga_ 6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAE--------- 76 (258)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH---------
T ss_pred CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHH---------
Confidence 6899999998 799999999999999999999985433211 123456677777777666655533
Q ss_pred cCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------------cceehhhHHHHHHH
Q psy3626 75 LRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------------TTVMSEGMKNIVTA 138 (189)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------------~~~~~~~~~~ll~~ 138 (189)
+.+...+.|+++++++....... ..++..+...+.+.
T Consensus 77 ---------------------------~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
T d1qsga_ 77 ---------------------------LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 129 (258)
T ss_dssp ---------------------------HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ---------------------------hhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 23444567888888765432211 11334444455555
Q ss_pred HHHC--CccEEEEeccceeecCCCCCCCCCccchhhHHHHHHHhh
Q psy3626 139 MKEY--NVSVVSVCLSAFLFYEPSKVPPMFHNVNDDHQRMYNVLK 181 (189)
Q Consensus 139 ~~~~--~~~~~i~iSS~~~~~~~~~~p~~~~~~~~~~~~~~~~l~ 181 (189)
+... +.+.+|++||..+... . +.+..|..+|...+.+.+
T Consensus 130 ~~~~~~~~~~Ii~iss~~~~~~---~-~~~~~Y~~sKaal~~ltr 170 (258)
T d1qsga_ 130 CRSMLNPGSALLTLSYLGAERA---I-PNYNVMGLAKASLEANVR 170 (258)
T ss_dssp HGGGEEEEEEEEEEECGGGTSB---C-TTTTHHHHHHHHHHHHHH
T ss_pred HHHhccCCcEEEEecchhhccC---C-CCcHHHHHHHHHHHHHHH
Confidence 5432 2356787888765432 1 233456777777776665
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.06 E-value=2.5e-11 Score=87.76 Aligned_cols=74 Identities=20% Similarity=0.217 Sum_probs=64.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++||||+|++|+.+++.|+++|++|++++|++++..++. ..++.+..+|+.+++++++.+.++|.+|++++.
T Consensus 24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~ 102 (191)
T d1luaa1 24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI 102 (191)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCcc
Confidence 68999999999999999999999999999999987665431 245678899999999999999999999988764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.93 E-value=2.6e-09 Score=80.22 Aligned_cols=89 Identities=15% Similarity=0.085 Sum_probs=59.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc-c-------cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS-E-------YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~-~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
+..+||||+++||+++++.|+++|++|++.+|+.++..+ + ..........|..+..+.++.++..
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 74 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI------- 74 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH-------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHH-------
Confidence 478999999999999999999999999999998654321 1 1234445555554332222222111
Q ss_pred ccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC
Q psy3626 74 LLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL 122 (189)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~ 122 (189)
.+.+.+.+++.|++|+++|...+.
T Consensus 75 -------------------------~~~~~~~~g~iDilvnnAG~~~~~ 98 (266)
T d1mxha_ 75 -------------------------IDCSFRAFGRCDVLVNNASAYYPT 98 (266)
T ss_dssp -------------------------HHHHHHHHSCCCEEEECCCCCCCC
T ss_pred -------------------------HHHHHHHhCCCCEEEECCccCCCC
Confidence 123456678899999999976543
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.92 E-value=1.7e-09 Score=80.84 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=34.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
||.|+||||+++||++++++|+++|++|++++|++.
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 899999999999999999999999999999998754
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.90 E-value=1.1e-09 Score=82.53 Aligned_cols=65 Identities=18% Similarity=0.151 Sum_probs=50.7
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCCCCCC----cccCCceeEEeccccChhHHHHhhhcC
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDPQRLP----SEYHSKVEIIQGDVLKLADVKKAIEGK 66 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~ 66 (189)
|+++||||+| +||++++++|+++|++|++..|+..+.. +....+...+.+|++++++++.+++..
T Consensus 7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v 77 (268)
T d2h7ma1 7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRV 77 (268)
T ss_dssp CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchh
Confidence 6899999654 6999999999999999999998865432 223456778889999888777766543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.78 E-value=7.7e-09 Score=69.87 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=48.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHh
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKA 62 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~ 62 (189)
|+|+|.|+ |.+|+.+++.|.++|++|++++++++....... .+..++.+|.++++.++++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~ 61 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDA 61 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhc
Confidence 68999997 999999999999999999999998766554322 2566777788777776655
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.69 E-value=3.1e-08 Score=76.88 Aligned_cols=34 Identities=18% Similarity=0.109 Sum_probs=29.8
Q ss_pred ceEEEEc--CCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFG--ATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItG--atG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|.++||| ++.+||+++++.|.++|.+|.+..+..
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~ 38 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence 5689999 557999999999999999999987653
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.67 E-value=1.5e-07 Score=71.58 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=31.0
Q ss_pred ceEEEEcCCC--hhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATG--MTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG--~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+++||||+| +||+++++.|+++|.+|++..|++
T Consensus 9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~ 44 (297)
T d1d7oa_ 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 6899999877 899999999999999999998853
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.58 E-value=1.7e-07 Score=63.05 Aligned_cols=67 Identities=13% Similarity=0.166 Sum_probs=53.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHh-hhcCcce
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKA-IEGKDGL 69 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~ 69 (189)
|+++|.|. |.+|+.+++.|.++|++|++++.+++............+.+|.++++.++++ +++++.+
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~v 68 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYV 68 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEE
Confidence 67899986 9999999999999999999999998776665555566778888888777665 4555443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.45 E-value=1.2e-06 Score=59.86 Aligned_cols=35 Identities=14% Similarity=0.339 Sum_probs=28.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-C---CcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-G---LEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g---~~v~~~~r~~ 35 (189)
|++|.|.||||++|+.+++.|+++ . .+++.+.++.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 999999999999999999988876 2 3455555543
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.22 E-value=7.9e-07 Score=62.06 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=56.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--CceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--SKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|+|+|+ |++|+.+++.|.++|++|+++.|+.++...+.. ........+..........+...+.++.+.+
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 76 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence 78999996 999999999999999999999999876665422 3344555666777788888888877665443
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.21 E-value=2.2e-06 Score=58.35 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=68.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||.|+||+|.+|+.++..|..++. ++..++.++.... ..|+. .++.+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~----------a~Dl~----------~~~~~----------- 50 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV----------AADLS----------HIETR----------- 50 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH----------HHHHT----------TSSSS-----------
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh----------hHHHh----------hhhhh-----------
Confidence 799999999999999998888764 5666665421100 01111 11100
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
.... ......+..+.++++|++|.++|....... ...|....+.+++.+.+.+.+.++++-|
T Consensus 51 ---------~~~~-~~~~~~~~~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 51 ---------ATVK-GYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp ---------CEEE-EEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred ---------cCCC-eEEcCCChHHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 0000 111234556778889999999997554422 2477888899999999988665555433
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.18 E-value=6.1e-07 Score=62.37 Aligned_cols=118 Identities=19% Similarity=0.147 Sum_probs=70.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
|++|.+.| .|.+|+.++++|+++||+|.+++|+++..+.+.... ........+.++.+|.++.+....+
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~e~~~~~diii~~v~~~~--- 69 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------ASAARSARDAVQGADVVISMLPASQ--- 69 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CEECSSHHHHHTSCSEEEECCSCHH---
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhh-------ccccchhhhhccccCeeeecccchh---
Confidence 89999999 699999999999999999999999876654332111 1112345566777777666554100
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
..+.+ +.....+...+.+-++++.+. ++....++.+.+.+++.|+ +++-
T Consensus 70 -------~~~~v---~~~~~~~~~~l~~g~iiid~s---------t~~p~~~~~~~~~~~~~gi-~~~d 118 (162)
T d3cuma2 70 -------HVEGL---YLDDDGLLAHIAPGTLVLECS---------TIAPTSARKIHAAARERGL-AMLD 118 (162)
T ss_dssp -------HHHHH---HHSTTCHHHHSCTTCEEEECS---------CCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred -------hHHHH---HhccccccccCCCCCEEEECC---------CCCHHHHHHHHHHHHHCCC-cEEe
Confidence 00000 000011122222334555442 2345667888888888875 5554
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.17 E-value=5.8e-07 Score=62.41 Aligned_cols=65 Identities=20% Similarity=0.234 Sum_probs=48.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|||.|.| .|.+|+.++++|+++|++|++++|+++..+.+....... .++.+++++++|.++.|.+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~d~ii~~v~ 65 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-------ASTAKAIAEQCDVIITMLP 65 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-------cccHHHHHhCCCeEEEEcC
Confidence 5799999 599999999999999999999999987665443222211 2344566778888777765
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.15 E-value=2.9e-07 Score=65.00 Aligned_cols=39 Identities=21% Similarity=0.248 Sum_probs=35.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
|||.|+||+|.+|+.+++.|++.|++|++.+|++++.+.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~ 39 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA 39 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 579999989999999999999999999999999876543
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.12 E-value=1.2e-05 Score=54.66 Aligned_cols=114 Identities=16% Similarity=0.205 Sum_probs=67.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+||+|.+|..++..|..++ .++..+++++... .. +-.. .++........
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~-~~-----~g~a------~Dl~~~~~~~~------------ 56 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSIN-KL-----EGLR------EDIYDALAGTR------------ 56 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHH-HH-----HHHH------HHHHHHHTTSC------------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhH-hh-----hccc------ccchhcccccc------------
Confidence 579999999999999999998887 4788887763211 00 0000 11111111100
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
..-++.....+ + .+.+.++|++|.++|........ ..|....+.+.+...+.+.+.++.+
T Consensus 57 -----~~~~~~~~~~~--d----~~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 57 -----SDANIYVESDE--N----LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp -----CCCEEEEEETT--C----GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred -----cCCccccCCcc--h----HHHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 00011111111 1 14567899999999976544332 3677778888888888776666544
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=8.9e-07 Score=61.26 Aligned_cols=38 Identities=45% Similarity=0.481 Sum_probs=34.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
|||+|+|+ |.+|..++..|.+.|++|+++.|++.....
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~ 38 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS 38 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhh
Confidence 68999997 999999999999999999999999876553
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=98.10 E-value=2.7e-06 Score=59.68 Aligned_cols=72 Identities=19% Similarity=0.150 Sum_probs=50.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC--------CceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH--------SKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|||.|+|+ |.+|..++..|.++|++|.+++|+++..+.... ..............++.+.++++|.++++.
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v 80 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 80 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence 79999996 999999999999999999999998755443211 111111111222234677888898887766
Q ss_pred c
Q psy3626 74 L 74 (189)
Q Consensus 74 ~ 74 (189)
.
T Consensus 81 ~ 81 (184)
T d1bg6a2 81 P 81 (184)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=98.07 E-value=2.6e-05 Score=52.95 Aligned_cols=23 Identities=17% Similarity=0.462 Sum_probs=21.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ 24 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~ 24 (189)
|||.|.||||++|+.+++.|+++
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~ 23 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEE 23 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT
T ss_pred CEEEEECCccHHHHHHHHHHHhc
Confidence 57999999999999999999875
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.05 E-value=5.1e-06 Score=56.64 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=67.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+|+ |.+|..++..|+.++ .++.+++++++..... ..|+.+ +...
T Consensus 6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~--------a~Dl~~------a~~~-------------- 56 (146)
T d1ez4a1 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGD--------ALDLED------AQAF-------------- 56 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHH--------HHHHHG------GGGG--------------
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHH--------HHHHhc------cccc--------------
Confidence 58999995 999999999999986 5789988765322110 012111 1100
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
........+|+ +.+.++|+++.++|....... ...|....+.+.+.+.+.+.+.++.+-|
T Consensus 57 ------~~~~~~~~~d~-------~~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 57 ------TAPKKIYSGEY-------SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp ------SCCCEEEECCG-------GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred ------cCCceEeeccH-------HHhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 11233445554 345789999999987654322 2356777888999999988766655433
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=98.02 E-value=3.8e-06 Score=59.07 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=28.6
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRD 34 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~ 34 (189)
|+||.|.||||++|+.+++.|.++ ..++..+..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 899999999999999999999887 4566666443
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.01 E-value=3.7e-06 Score=60.37 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=33.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
|||.|.| .|++|..++..|.+.|++|++++.+++....+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI 39 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence 5799998 59999999999999999999999886655443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.96 E-value=3.2e-06 Score=58.59 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=44.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCce-eEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKV-EIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|||.|.|. |.+|+.+++.|.+.|++|++++|+++..+.....++ .... ...+.++++|.++++++
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~-------~~~~~~~~~DiIilavp 66 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG-------QDLSLLQTAKIIFLCTP 66 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE-------SCGGGGTTCSEEEECSC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceee-------eecccccccccccccCc
Confidence 57999985 999999999999999999999998655443211111 1111 11235677887776553
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.90 E-value=8e-05 Score=50.23 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=63.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+||.|+|+ |.+|..++..|+.++. ++.+++++++..... ..|+.+ +.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~--------a~Dl~~----------~~------------ 50 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGE--------AMDINH----------GL------------ 50 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHH--------HHHHTT----------SC------------
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCcccee--------eeeecc----------Cc------------
Confidence 68999997 9999999999998864 799999887654311 111111 10
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.+........+++ +.+.++|+++.++|....... ...|....+.+.+.+.+.+.+.++.+
T Consensus 51 ----~~~~~~~~~~~~~-------~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~iv 115 (142)
T d1y6ja1 51 ----PFMGQMSLYAGDY-------SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 115 (142)
T ss_dssp ----CCTTCEEEC--CG-------GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred ----ccCCCeeEeeCcH-------HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEE
Confidence 0011233333333 356778999999987654322 13566677888888888776554443
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.89 E-value=8.4e-06 Score=57.36 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=28.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEe
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLL 32 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~ 32 (189)
|+||.|.||||++|+.+++.|..+ ..++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 999999999999999999999998 66776554
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.83 E-value=4.7e-05 Score=51.77 Aligned_cols=107 Identities=19% Similarity=0.230 Sum_probs=65.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+||.|+|+ |.+|..++..|+..+. ++.+++++++.+.. ...|+ .....-
T Consensus 7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g--------~a~Dl------~~~~~~-------------- 57 (148)
T d1ldna1 7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIG--------DAMDF------NHGKVF-------------- 57 (148)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH--------HHHHH------HHHTTS--------------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccc--------hhccH------hhCccc--------------
Confidence 37999997 9999999999998864 68888876543221 01111 111100
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
......+..+|+ +.+.++|+++.++|........ ..|....+.+.+.+.+.+.+.++.
T Consensus 58 -----~~~~~~~~~~d~-------~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~i 120 (148)
T d1ldna1 58 -----APKPVDIWHGDY-------DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFL 120 (148)
T ss_dssp -----SSSCCEEEECCG-------GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEE
T ss_pred -----cCCCeEEEECCH-------HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEE
Confidence 011233334443 4567899999999876544322 255666777888888876554443
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=0.00013 Score=49.29 Aligned_cols=107 Identities=23% Similarity=0.225 Sum_probs=62.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc---CCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ---GLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
|||.|+|++|.+|+.++-.|..+ ..++..++..+ ..... ..|+.+ +..
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~--------a~Dl~h----------~~~---------- 51 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGV--------AVDLSH----------IPT---------- 51 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHH--------HHHHHT----------SCS----------
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhH--------HHHHHC----------Ccc----------
Confidence 68999999999999999877543 46777777542 11100 011111 100
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
......+.+ ..+ .+.+.++|++|.++|....... ...|....+.+.+.+.+.+.+.++.
T Consensus 52 -------~~~~~~~~~----~~~-~~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivi 115 (145)
T d2cmda1 52 -------AVKIKGFSG----EDA-TPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIG 115 (145)
T ss_dssp -------SCEEEEECS----SCC-HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred -------ccCCcEEEc----CCC-ccccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 001111111 111 2356788999999987654422 2367777888888888887554443
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.80 E-value=9.9e-06 Score=55.24 Aligned_cols=37 Identities=24% Similarity=0.245 Sum_probs=34.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
|+||.|+||.|.+|+.+++.|.++||+|.+++|++..
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~ 45 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA 45 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence 6799999999999999999999999999999987643
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.79 E-value=7.6e-05 Score=50.29 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=65.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+|+ |.+|..++..|...+ .++.+++++++..... ..|+.+.... .
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~--------~~d~~~~~~~----~--------------- 52 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGK--------ALDMYESGPV----G--------------- 52 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHH--------HHHHHTTHHH----H---------------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhh--------hhhhhcccch----h---------------
Confidence 57999996 999999999999886 4788888776443211 1122111110 0
Q ss_pred CCCccccCceeEE-eccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEII-QGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
..+..+. ..|+ +.+.++|+++.++|........ ..|....+.+.+.+.+.+.+.++.+
T Consensus 53 ------~~~~~i~~~~~~-------~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv 116 (142)
T d1guza1 53 ------LFDTKVTGSNDY-------ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV 116 (142)
T ss_dssp ------TCCCEEEEESCG-------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred ------cccceEEecCCH-------HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence 0122222 1222 4467889999999876544322 2566667778888888776555543
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.77 E-value=7e-05 Score=50.76 Aligned_cols=108 Identities=22% Similarity=0.252 Sum_probs=66.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+|+ |.+|..++..|+.+| .++..+++++..... ...| +.++....
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g--------~~~D------l~~a~~~~------------- 53 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKA--------DQID------FQDAMANL------------- 53 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH--------HHHH------HHHHGGGS-------------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhh--------HHHh------hhcccccc-------------
Confidence 78999995 999999999999886 367777765432211 0011 22221111
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCC--C-------CcceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDL--S-------PTTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~--~-------~~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.....+..+|+ +.+.++|++|.++|..... . -...|...++.+.+.+.+.+.+.++.+
T Consensus 54 ------~~~~~~~~~d~-------~~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv 120 (146)
T d1hyha1 54 ------EAHGNIVINDW-------AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV 120 (146)
T ss_dssp ------SSCCEEEESCG-------GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ------CCccceeccCH-------HHhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 11233334443 4467899999999854321 1 122567778888888888876655544
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.75 E-value=8.7e-05 Score=51.96 Aligned_cols=33 Identities=24% Similarity=0.238 Sum_probs=30.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|.|+|+ |-.|.+++..|.+.|++|+++.|..
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~ 33 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEF 33 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGG
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecc
Confidence 68999996 9999999999999999999999853
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.71 E-value=9.6e-05 Score=49.92 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=26.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC---CcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG---LEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g---~~v~~~~r~ 34 (189)
|+|.|.||||++|+.+++.|.+++ .++..+..+
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 689999999999999999997654 356655444
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.70 E-value=8.4e-05 Score=50.11 Aligned_cols=108 Identities=20% Similarity=0.170 Sum_probs=65.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+|+ |.+|..++..|..++ .++.+++++++.... ...|+ .......+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g--------~alDl------~~~~~~~~------------ 53 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG--------EAMDL------AHAAAGID------------ 53 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHH--------HHHHH------HHHHHTTT------------
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhH--------HHHHH------hhhccccC------------
Confidence 68999996 999999999998876 367777766433211 01122 12211110
Q ss_pred CCCccccCceeEEe-ccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQ-GDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
...++.. .|+ +.+.++|+++.++|........ ..|....+.+.+.+.+.+.+.++++
T Consensus 54 -------~~~~i~~~~d~-------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aiviv 116 (142)
T d1ojua1 54 -------KYPKIVGGADY-------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV 116 (142)
T ss_dssp -------CCCEEEEESCG-------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred -------CCCccccCCCH-------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEE
Confidence 0112222 232 4567899999999866544332 2566667778888888876655554
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.69 E-value=4.9e-05 Score=51.32 Aligned_cols=109 Identities=20% Similarity=0.236 Sum_probs=66.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
||.|+|++|.+|+.++..|..++. ++..++..... .. ..-...|+ ..... .
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~-~~-----~~g~a~Dl------~~~~~-~-------------- 54 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE-DD-----TVGQAADT------NHGIA-Y-------------- 54 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH-HH-----HHHHHHHH------HHHHT-T--------------
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcc-cc-----cceeecch------hhccc-c--------------
Confidence 799999999999999999998864 56666642110 00 00001111 11110 0
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
..+..+..+++ +.+.++|+++.++|....... ...|....+.+.+.+.+.+.+.++.+
T Consensus 55 -----~~~~~i~~~~~-------~~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~iv 117 (142)
T d1o6za1 55 -----DSNTRVRQGGY-------EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLT 117 (142)
T ss_dssp -----TCCCEEEECCG-------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEE
T ss_pred -----cCCceEeeCCH-------HHhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 11334444444 235689999999997654432 23577778888899998876655543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.68 E-value=0.00021 Score=48.72 Aligned_cols=112 Identities=19% Similarity=0.215 Sum_probs=65.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+||.|+|+ |.+|..++..|...+. ++.+++.+++.+... ..|+.+.. .... .
T Consensus 8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~--------a~Dl~~~~---~~~~-~-------------- 60 (154)
T d1pzga1 8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGK--------ALDLSHVT---SVVD-T-------------- 60 (154)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH--------HHHHHHHH---HHTT-C--------------
T ss_pred CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhH--------HHHHhhhc---cccC-C--------------
Confidence 58999997 9999999988877774 788877765433211 11221111 1110 0
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC----------cceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP----------TTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~----------~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
....... .+..+++.++|+++.++|....... ...|....+.+++.+.+.+.+.++.+
T Consensus 61 -------~~~~~~~-----~~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aivii 128 (154)
T d1pzga1 61 -------NVSVRAE-----YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV 128 (154)
T ss_dssp -------CCCEEEE-----CSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred -------eeEEecc-----CchhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEE
Confidence 0001111 1234567789999999986543211 12456668888888888877666654
Q ss_pred cc
Q psy3626 151 LS 152 (189)
Q Consensus 151 SS 152 (189)
-|
T Consensus 129 vs 130 (154)
T d1pzga1 129 VT 130 (154)
T ss_dssp CC
T ss_pred eC
Confidence 33
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.64 E-value=8.5e-05 Score=51.75 Aligned_cols=72 Identities=13% Similarity=0.186 Sum_probs=47.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCcee-EEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVE-IIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
+.+|.|+| -|.+|..++++|++.|++|++++|++++.+++...... .........+++...+...|.++.+.
T Consensus 2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~ 74 (176)
T d2pgda2 2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLV 74 (176)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECS
T ss_pred CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEec
Confidence 46899999 59999999999999999999999998766543211100 00011234455556666666555444
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.64 E-value=3.8e-05 Score=52.32 Aligned_cols=65 Identities=14% Similarity=0.108 Sum_probs=45.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|||.|+| .|.+|+.+++.|+++|++|++..|+++...........+ .++..++++.+|.++.++.
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~e~~~~~diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGV-------TETSEEDVYSCPVVISAVT 65 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTC-------EECCHHHHHTSSEEEECSC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccc-------cccHHHHHhhcCeEEEEec
Confidence 5799998 699999999999999999999888765543221111111 1223456778887776664
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.62 E-value=4.7e-05 Score=51.25 Aligned_cols=107 Identities=25% Similarity=0.307 Sum_probs=65.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
|||.|+|+ |.+|..++..|+.++ .++.+++++++.... ...|+ ..... .
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g--------~~~Dl------~~~~~-~------------- 51 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEG--------DALDL------IHGTP-F------------- 51 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH--------HHHHH------HHHGG-G-------------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccc--------hhccc------ccccc-c-------------
Confidence 58999996 999999999888875 467777766432211 00111 11100 0
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
..+.....+|+ +.+.++|+++.++|........ ..|....+.+.+.+.+.+.+.++.+
T Consensus 52 ------~~~~~~~~~~~-------~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv 114 (140)
T d1a5za1 52 ------TRRANIYAGDY-------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114 (140)
T ss_dssp ------SCCCEEEECCG-------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ------cccccccCCcH-------HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence 11223334443 4467899999999876654322 2466667888888888876655554
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.61 E-value=3.7e-06 Score=59.85 Aligned_cols=72 Identities=21% Similarity=0.297 Sum_probs=51.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCccc--C------CceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEY--H------SKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~--~------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
|+||+|+|+ |..|.+++..|.+.|++|+++.|+++....+. + +++. ..-++.-..+++++++++|.++.+
T Consensus 7 m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~-l~~~i~~t~~l~~a~~~ad~iiia 84 (189)
T d1n1ea2 7 LNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQ-LASNITFTSDVEKAYNGAEIILFV 84 (189)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCB-CCTTEEEESCHHHHHTTCSCEEEC
T ss_pred eceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccc-cccccccchhhhhccCCCCEEEEc
Confidence 678999996 99999999999999999999999865443221 0 1111 122333335678889999988877
Q ss_pred cc
Q psy3626 73 TL 74 (189)
Q Consensus 73 ~~ 74 (189)
++
T Consensus 85 vP 86 (189)
T d1n1ea2 85 IP 86 (189)
T ss_dssp SC
T ss_pred Cc
Confidence 65
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=0.00034 Score=43.35 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=30.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
|+|+|.|. |..|..+++.|.++|++|++.+.++.
T Consensus 6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 68999997 99999999999999999999998654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=4.6e-05 Score=51.85 Aligned_cols=71 Identities=14% Similarity=0.179 Sum_probs=55.8
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC----CcccCCceeEEeccccChhHHHHhh-hcCcceeeecc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL----PSEYHSKVEIIQGDVLKLADVKKAI-EGKDGLEVCTL 74 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~ 74 (189)
+|+|.|. |-+|+.+++.|.++|++++++..+++.. ......++.++.+|.++++.++++- +.++.++.+..
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 5888886 9999999999999999999999877532 2223467899999999999886654 66777665553
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.00017 Score=46.42 Aligned_cols=61 Identities=15% Similarity=0.164 Sum_probs=50.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEG 65 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 65 (189)
.||.|+|| |.+|+-++....+-|+++++++.+++..... .--.++.+|..|.+.+.+....
T Consensus 12 ~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--va~~~i~~~~~d~~~l~~~~~~ 72 (111)
T d1kjqa2 12 TRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH--VAHRSHVINMLDGDALRRVVEL 72 (111)
T ss_dssp CEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--GSSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--cCCeEEECCCCCHHHHHHHHHh
Confidence 58999996 9999999999988999999999987765532 2235788999999999888754
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.57 E-value=3.4e-05 Score=54.07 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=33.7
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
+|+|.||+|.+|...+......|.+|++..+++++.+.
T Consensus 34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~ 71 (176)
T d1xa0a2 34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY 71 (176)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred EEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHH
Confidence 69999999999999998888889999999998876653
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.56 E-value=0.00017 Score=48.58 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=64.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
.+||.|+|+ |.+|..++..|..++. ++.+++..++.... ...|+.+...+. ..
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~--------~~~Dl~~~~~~~----~~------------- 54 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQG--------KALDLYEASPIE----GF------------- 54 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHH--------HHHHHHTTHHHH----TC-------------
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchh--------HHHHhhcccccc----CC-------------
Confidence 368999996 9999999998888764 77777776543321 112222221111 00
Q ss_pred CCCccccCceeEE-eccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEII-QGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
...+. ..|+ +.+.++|+++.++|....... ...|....+.+++...+.+.+.++.+
T Consensus 55 --------~~~i~~~~d~-------~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv 116 (142)
T d1uxja1 55 --------DVRVTGTNNY-------ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM 116 (142)
T ss_dssp --------CCCEEEESCG-------GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred --------CCEEEecCcH-------HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence 11121 2232 345678999999987653321 23566677888888888876655554
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.55 E-value=0.00027 Score=48.49 Aligned_cols=108 Identities=18% Similarity=0.218 Sum_probs=65.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
+||.|+|+ |.+|..++..|..+|. ++..++++++.... ...|+.+... +
T Consensus 21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g--------~alDl~h~~~----~---------------- 71 (160)
T d1i0za1 21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKG--------EMMDLQHGSL----F---------------- 71 (160)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHH--------HHHHHHHTGG----G----------------
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHH--------HHHHHhcccc----c----------------
Confidence 48999996 9999999999999975 78888776433211 0111111000 0
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.+.....-.+|+ +.+.++|+++.++|........ ..|....+.+.+.+.+.+.+-++.+
T Consensus 72 -----~~~~~~~~~~d~-------~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiiv 135 (160)
T d1i0za1 72 -----LQTPKIVADKDY-------SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIV 135 (160)
T ss_dssp -----CCCSEEEECSSG-------GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred -----cCCCeEEeccch-------hhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 011122223333 3466799999999976544222 2566667888888888776655443
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.55 E-value=0.0001 Score=52.11 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=31.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
|||.|.| .|++|..++..| ++|++|++++.++...+.+
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l 38 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI 38 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence 6899998 699999998755 5799999999887665544
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.53 E-value=1.7e-05 Score=54.72 Aligned_cols=73 Identities=18% Similarity=0.286 Sum_probs=54.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
+++++|+|+ |.+|+.+++.|...|. ++++..|+.++...+... +.+.....+++...+.++|.+|.++++-.|
T Consensus 24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~----~~~~~~~~~~~~~~l~~~Divi~atss~~~ 97 (159)
T d1gpja2 24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD----LGGEAVRFDELVDHLARSDVVVSATAAPHP 97 (159)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH----HTCEECCGGGHHHHHHTCSEEEECCSSSSC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHh----hhcccccchhHHHHhccCCEEEEecCCCCc
Confidence 368999996 9999999999999997 689999986665443221 111223456788889999999988875433
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.52 E-value=0.0003 Score=47.35 Aligned_cols=107 Identities=21% Similarity=0.223 Sum_probs=65.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
.||.|+|+ |.+|..++..|..++. ++.+++++++.... ...|+.+...+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g--------~a~Dl~~a~~~-------------------- 52 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEA--------EVLDMQHGSSF-------------------- 52 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHH--------HHHHHHHTGGG--------------------
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchh--------HHHHHHhcccc--------------------
Confidence 58999996 9999999999998864 68887776533211 01111111000
Q ss_pred CCCccccCceeEEec-cccCHHHHHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 80 RLPSEYHSKVEIIQG-DVLKLADVKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
.....+... ++ +.+.++|+++.++|........ ..|....+.+.+.+.+.+.+.++.+
T Consensus 53 ------~~~~~i~~~~~~-------~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv 116 (143)
T d1llda1 53 ------YPTVSIDGSDDP-------EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML 116 (143)
T ss_dssp ------STTCEEEEESCG-------GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ------CCCceeecCCCH-------HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence 011222222 22 3466789999999976644322 2566777888888888876545443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.52 E-value=3.4e-05 Score=54.13 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=33.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
.+|+|+||+|.+|...+......|.+|+++++++++.+
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~ 68 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA 68 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH
Confidence 37999999999999999988888999999998865543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.44 E-value=6.1e-05 Score=52.03 Aligned_cols=38 Identities=18% Similarity=0.407 Sum_probs=32.1
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~ 39 (189)
||+|+|.| .|.+|..+++.|.+.|+ +|++++|+++..+
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~ 40 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESIS 40 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHH
Confidence 89999999 59999999999999986 6788888765443
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.42 E-value=5e-05 Score=50.18 Aligned_cols=69 Identities=25% Similarity=0.330 Sum_probs=54.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhh-hcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI-EGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~ 73 (189)
|+++|.|. |-+|+.+++.| +++.|.++..+++........++.++.+|.++++.++++- +.++.++.+.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL 70 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence 57899995 99999999998 4567888888877666555678899999999998887753 5666655444
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.40 E-value=0.00038 Score=45.88 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=26.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEe
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLL 32 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~ 32 (189)
|||.|.|++|..|+.+.+.+.++++++.+..
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~i 31 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKV 31 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 5799999999999999988888898876553
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.37 E-value=0.00028 Score=48.93 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=34.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
|||.|+| .|.+|..++++|++.|++|.+++|++++...+
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l 40 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEF 40 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence 6899999 69999999999999999999999987766543
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.31 E-value=4.6e-05 Score=53.24 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=32.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
.+|+|+||+|.+|...+..+...|.+++++++++++.+
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~ 64 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE 64 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CEEEEECCCCCcccccchhhccccccceeeeccccccc
Confidence 37999999999999999988888999999998765443
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.30 E-value=0.00029 Score=48.27 Aligned_cols=107 Identities=19% Similarity=0.177 Sum_probs=63.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQ 79 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (189)
.||.|+|+ |.+|..++..|..++. ++.+++++++.... ...|+. ....-
T Consensus 20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g--------~alDl~------~~~~~-------------- 70 (159)
T d2ldxa1 20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRG--------EALDLQ------HGSLF-------------- 70 (159)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHH--------HHHHHH------HTTTT--------------
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhc--------cHHHHh------Ccchh--------------
Confidence 37999996 9999999999998864 68888766432211 001111 11000
Q ss_pred CCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHCCccEEEE
Q psy3626 80 RLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.+........|+ +.+.++|+++.++|....... ...|....+.+.+.+.+.+.+-++.
T Consensus 71 -----~~~~~~~~~~d~-------~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivi 133 (159)
T d2ldxa1 71 -----LSTPKIVFGKDY-------NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKII 133 (159)
T ss_dssp -----CSCCEEEEESSG-------GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEE
T ss_pred -----cCCCeEEeccch-------hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 011112222333 345678999999987654422 2356777777888887776654444
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.29 E-value=0.0038 Score=43.37 Aligned_cols=60 Identities=20% Similarity=0.220 Sum_probs=47.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.+..-|.+|++++|++..... ...+++++.++.+|++++++++
T Consensus 43 k~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~-------------~~~~~l~ell~~sDiv~~~~pl 102 (181)
T d1qp8a1 43 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW-------------RFTNSLEEALREARAAVCALPL 102 (181)
T ss_dssp CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS-------------CCBSCSHHHHTTCSEEEECCCC
T ss_pred ceEEEec-cccccccceeeeeccccccccccccccccce-------------eeeechhhhhhccchhhccccc
Confidence 5899999 5999999999999999999999988653321 1123578899999998887765
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=0.00015 Score=43.52 Aligned_cols=37 Identities=22% Similarity=0.283 Sum_probs=32.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|+||+|.+|...+..+...|++|+++.+++++.
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 3699999999999999998888899999999987554
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.24 E-value=0.0035 Score=43.75 Aligned_cols=107 Identities=11% Similarity=0.075 Sum_probs=67.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRL 81 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (189)
+++.|.| .|.||+.+++.+..-|.+|.+.++....... . ....++++++++.+|++++++++.+.+
T Consensus 45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~--------~~~~~~l~ell~~sDii~i~~plt~~T-- 110 (188)
T d1sc6a1 45 KKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG---N--------ATQVQHLSDLLNMSDVVSLHVPENPST-- 110 (188)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---T--------CEECSCHHHHHHHCSEEEECCCSSTTT--
T ss_pred eEEEEee-cccchhhhhhhcccccceEeeccccccchhh---h--------hhhhhhHHHHHhhccceeecccCCcch--
Confidence 5799998 6999999999998889999999987543321 1 011246778899999988877754332
Q ss_pred CccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 82 PSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
. .+-+.+. .+.+.+-.++|+++-.. +--...+++++++...
T Consensus 111 -------~-----~li~~~~-l~~mk~~a~lIN~aRG~---------lvde~aL~~aL~~~~~ 151 (188)
T d1sc6a1 111 -------K-----NMMGAKE-ISLMKPGSLLINASRGT---------VVDIPALADALASKHL 151 (188)
T ss_dssp -------T-----TCBCHHH-HHHSCTTEEEEECSCSS---------SBCHHHHHHHHHTTSE
T ss_pred -------h-----hhccHHH-HhhCCCCCEEEEcCcHH---------hhhhHHHHHHHHcCCc
Confidence 0 1223333 34444434455544332 2235677777777653
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=4e-05 Score=53.29 Aligned_cols=37 Identities=22% Similarity=0.334 Sum_probs=31.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
.+|+|+||+|.+|...+..+...|.+|+++++++++.
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~ 66 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ 66 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CEEEEEeccccccccccccccccCccccccccccccc
Confidence 3799999999999999988888899999999876543
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.21 E-value=2.1e-05 Score=55.63 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=33.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
+++|.|.|+ |.+|+.++..++..|++|++++++++.++
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~ 41 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIE 41 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHh
Confidence 468999996 99999999999999999999999876543
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.20 E-value=0.0012 Score=45.21 Aligned_cols=71 Identities=20% Similarity=0.186 Sum_probs=44.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEecccc-ChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVL-KLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~ 74 (189)
.+++|+|+ |.+|...+..+...|.+|+++++++++.+....-+.+.+. |.. +.+..++..+++|.++.+.+
T Consensus 29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i-~~~~~~~~~~~~~~~~d~vi~~~~ 100 (168)
T d1piwa2 29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYFDTFDLIVVCAS 100 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSCSCEEEEEECCS
T ss_pred CEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEe-eccchHHHHHhhhcccceEEEEec
Confidence 37999996 9999988877777799999999998776543222222221 222 23334444555666655544
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.19 E-value=0.0012 Score=42.21 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=30.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++++|.|+ |.+|..-++.|++.|.+|++++...
T Consensus 13 k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~ 45 (113)
T d1pjqa1 13 RDCLIVGG-GDVAERKARLLLEAGARLTVNALTF 45 (113)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence 68999996 9999999999999999999987654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.19 E-value=0.00018 Score=48.92 Aligned_cols=109 Identities=16% Similarity=0.140 Sum_probs=64.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQR 80 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (189)
+||.|+|+ |.+|+.++..|..++. ++.+++++++.... ...|+.+...+ ...
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g--------~a~Dl~~~~~~----~~~-------------- 56 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHG--------KALDTSHTNVM----AYS-------------- 56 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHH--------HHHHHHTHHHH----HTC--------------
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCccee--------eecchhhhccc----cCC--------------
Confidence 58999996 9999999987777753 67777776543321 11222222111 111
Q ss_pred CCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCC-C---------cceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 81 LPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLS-P---------TTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~-~---------~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
+..+...+ ..+.+.++|+++.++|...... . ...|....+.+.+.+.+.+.+.++++
T Consensus 57 -------~~~v~~~~------~~~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv 123 (150)
T d1t2da1 57 -------NCKVSGSN------TYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV 123 (150)
T ss_dssp -------CCCEEEEC------CGGGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred -------CcEEEecc------cccccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 11111111 1245667899999998654321 1 23566678888888888876655544
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00043 Score=48.32 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=58.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCccc--------CCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEY--------HSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
++++|+|+ |+.|++++..|.+.|. ++++..|+++..++.. .........++.+.+.+...+..+|.+|.+
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN~ 97 (182)
T d1vi2a1 19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNG 97 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceeccc
Confidence 58999995 9999999999999976 7888899887665321 122445677888888999999999999999
Q ss_pred ccc
Q psy3626 73 TLL 75 (189)
Q Consensus 73 ~~~ 75 (189)
++.
T Consensus 98 Tp~ 100 (182)
T d1vi2a1 98 TKV 100 (182)
T ss_dssp SST
T ss_pred cCC
Confidence 875
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.17 E-value=0.00048 Score=46.83 Aligned_cols=24 Identities=29% Similarity=0.437 Sum_probs=21.8
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL 26 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~ 26 (189)
||.|.||||++|..+++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999988854
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.00025 Score=49.04 Aligned_cols=38 Identities=24% Similarity=0.184 Sum_probs=33.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
++|+|+|+ |+.+++++..|.+.|.+|+++.|++++...
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~ 56 (170)
T d1nyta1 19 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEE 56 (170)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHH
Confidence 68999995 999999999999999999999999766554
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.12 E-value=0.00032 Score=47.71 Aligned_cols=49 Identities=16% Similarity=0.034 Sum_probs=32.6
Q ss_pred HHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHC-Ccc-EEEEec
Q psy3626 103 KKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEY-NVS-VVSVCL 151 (189)
Q Consensus 103 ~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~-~~~-~~i~iS 151 (189)
.+.+.++|+++.++|........ ..|....+.+.+.+.+. ... .++.+|
T Consensus 75 ~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 75 KVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred hhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 46788999999999976544322 24666778888888774 323 444443
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=97.09 E-value=0.00077 Score=40.31 Aligned_cols=62 Identities=16% Similarity=0.281 Sum_probs=44.4
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhc
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEG 65 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~ 65 (189)
||+|.|+|+ |.+|+-++..-.+-|+++.+++.+++..... ..-.++..+..+ .+.+.+.++.
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~--~a~dvIT~e~E~~~~~~l~~~la~ 64 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP--FQQSVITAEIERWPETALTRQLAR 64 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGGGSC--GGGSEEEESSSCCCCCHHHHHHHT
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCcccc--cccceEEEeeccCChHHHHHHHHH
Confidence 899999995 9999999999988899999999876655432 223455655554 2344444443
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=97.08 E-value=0.00055 Score=47.74 Aligned_cols=123 Identities=16% Similarity=0.088 Sum_probs=71.4
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDPQRLP 82 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (189)
+++|+|+ |-.|.+-++....-|.+|++++.++..+..+......++..+..+....+..-.-+
T Consensus 31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA---------------- 93 (183)
T d1l7da1 31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYA---------------- 93 (183)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-------------------------------
T ss_pred EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccch----------------
Confidence 7999997 99999999999999999999999988777654444444444333332222111000
Q ss_pred ccccCceeEEecc--ccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEecccee
Q psy3626 83 SEYHSKVEIIQGD--VLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLSAFL 155 (189)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS~~~ 155 (189)
.....+ ..+.+.+.+.+.++|.+|.++-......|. ..++.+++.|+... -+|=++...+
T Consensus 94 -------~~~s~~~~~~~~~~l~~~l~~aDlVI~talipG~~aP~----lit~~mv~~Mk~GS--VIVDvaidqG 155 (183)
T d1l7da1 94 -------KEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPV----LITEEMVTKMKPGS--VIIDLAVEAG 155 (183)
T ss_dssp ---------------CCHHHHHHHHHTTCSEEEECCCCTTSCCCC----CSCHHHHTTSCTTC--EEEETTGGGT
T ss_pred -------hhcCHHHHHHHHHHHHHHHHhhhhheeeeecCCcccce----eehHHHHHhcCCCc--EEEEEeecCC
Confidence 000001 123456778888899999987665544332 23556666665543 3555655544
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.06 E-value=0.0021 Score=42.52 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=25.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHc-CCcEEEEe
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ-GLEVCTLL 32 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~ 32 (189)
||.|.|++|..|+.+++.+.+. ++++....
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~ 31 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL 31 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 6999999999999999988775 67776554
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.04 E-value=7.7e-05 Score=50.79 Aligned_cols=64 Identities=14% Similarity=0.062 Sum_probs=46.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccC-CceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
|||.|.| .|-+|+++++.|++.++++++..|++++...+.. .++.+ ..+.+++++.+|.+++++
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~-------~~~~~~~~~~~dvIilav 65 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY-------AMSHQDLIDQVDLVILGI 65 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB-------CSSHHHHHHTCSEEEECS
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee-------echhhhhhhccceeeeec
Confidence 5799999 5999999999999999999999998765544321 11111 123556677899887666
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.04 E-value=0.00012 Score=49.72 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=33.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCCcc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLPSE 41 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~~~ 41 (189)
|||.+.|+ |.+|+++++.|++.| ++|.+.+|++++...+
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l 40 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERL 40 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHh
Confidence 58999995 999999999999886 8999999998766544
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.03 E-value=0.00042 Score=47.56 Aligned_cols=36 Identities=36% Similarity=0.498 Sum_probs=30.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
+++|+| .|.+|...+..+...|.+|+++++++++.+
T Consensus 29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~ 64 (170)
T d1e3ja2 29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLE 64 (170)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHH
Confidence 789998 699999998888778999999998876554
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=97.02 E-value=0.0049 Score=43.44 Aligned_cols=62 Identities=13% Similarity=0.199 Sum_probs=47.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.|..-|.+|+++++.+..... ... +..+++..++.+|++.++++.
T Consensus 46 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~--------~~~~l~~l~~~~D~v~~~~pl 107 (199)
T d1dxya1 46 QTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH---PDF--------DYVSLEDLFKQSDVIDLHVPG 107 (199)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC---TTC--------EECCHHHHHHHCSEEEECCCC
T ss_pred eeeeeee-cccccccccccccccceeeeccCCccchhhh---cch--------hHHHHHHHHHhcccceeeecc
Confidence 5899999 5999999999998889999999987654322 111 123577888899988877764
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.98 E-value=0.0002 Score=50.29 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=26.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEec
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLR 33 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r 33 (189)
.||.|.||||++|+.+++.|.++ ..++..+..
T Consensus 6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S 38 (183)
T d2cvoa1 6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA 38 (183)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred cEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence 48999999999999999999987 456666643
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=96.87 E-value=0.00063 Score=46.90 Aligned_cols=70 Identities=21% Similarity=0.247 Sum_probs=46.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeee
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVC 72 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 72 (189)
.+|+|+||+|.+|...+..+...|.+|+++++++++.+....-+.+.+ .|..+...-.....++|.++-+
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~ 98 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEV 98 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred CEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhccccccccccc
Confidence 379999999999999998888889999999998776654332222221 2333332233344566766543
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.00078 Score=46.17 Aligned_cols=31 Identities=35% Similarity=0.479 Sum_probs=26.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEe
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLL 32 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~ 32 (189)
+||+|.|++|.+|+.+++.+.+. +.++.+..
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~ 36 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAAL 36 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 58999999999999999999886 67765554
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.84 E-value=0.004 Score=43.71 Aligned_cols=66 Identities=14% Similarity=0.085 Sum_probs=49.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
+++.|.| .|.||+.+++.|..-|.+|.+.++........ ..+.....+++.+++.+|++++++++.
T Consensus 50 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~--------~~~~~~~~~l~~ll~~sD~i~~~~plt 115 (193)
T d1mx3a1 50 ETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVER--------ALGLQRVSTLQDLLFHSDCVTLHCGLN 115 (193)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH--------HHTCEECSSHHHHHHHCSEEEECCCCC
T ss_pred ceEEEec-cccccccceeeeeccccceeeccCcccccchh--------hhccccccchhhccccCCEEEEeeccc
Confidence 5899999 59999999999988899999999875432211 011223457888899999988777754
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.84 E-value=0.0041 Score=38.55 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=28.4
Q ss_pred CceEEEEcCCChhh-HHHHHHHHHcCCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTG-LCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG-~~l~~~L~~~g~~v~~~~r~~ 35 (189)
+++|.+.|- |++| +.+++.|.++|++|.+.++..
T Consensus 8 ~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~ 42 (96)
T d1p3da1 8 VQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIAD 42 (96)
T ss_dssp CCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCC
T ss_pred CCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 368999995 7777 677899999999999999864
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.83 E-value=0.0047 Score=44.37 Aligned_cols=61 Identities=16% Similarity=0.162 Sum_probs=37.3
Q ss_pred CChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeec
Q psy3626 10 TGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 10 tG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~ 73 (189)
||..|.+|++.+..+|++|+++....+.... ..+..+...-.+ .+.+...++.+|++|.++
T Consensus 31 SGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p---~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aA 93 (223)
T d1u7za_ 31 SGKMGFAIAAAAARRGANVTLVSGPVSLPTP---PFVKRVDVMTALEMEAAVNASVQQQNIFIGCA 93 (223)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSCCCCCC---TTEEEEECCSHHHHHHHHHHHGGGCSEEEECC
T ss_pred cHHHHHHHHHHHHHcCCchhhhhcccccCcc---cccccceehhhHHHHHHHHhhhccceeEeeee
Confidence 7999999999999999999999876443221 334444333221 233444445555444333
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.75 E-value=0.0043 Score=43.69 Aligned_cols=63 Identities=13% Similarity=0.050 Sum_probs=47.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.|..-|.+|+++++....... .+.....++++.++.+|+++++++.
T Consensus 44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~----------~~~~~~~~l~~~l~~sDii~~~~pl 106 (197)
T d1j4aa1 44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE----------KKGYYVDSLDDLYKQADVISLHVPD 106 (197)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH----------HTTCBCSCHHHHHHHCSEEEECSCC
T ss_pred CeEEEec-ccccchhHHHhHhhhcccccccCcccccccc----------cceeeeccccccccccccccccCCc
Confidence 5899999 6999999999998779999999876432111 0112345678889999988877764
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.75 E-value=0.0031 Score=43.65 Aligned_cols=50 Identities=10% Similarity=-0.039 Sum_probs=33.6
Q ss_pred HHHHhcCCCEEEEeeccCCCCCCc-----ceehhhHHHHHHHHHHC-Cc-cEEEEec
Q psy3626 102 VKKAIEGKDGVVVALGTRNDLSPT-----TVMSEGMKNIVTAMKEY-NV-SVVSVCL 151 (189)
Q Consensus 102 ~~~~~~~~d~vv~~~~~~~~~~~~-----~~~~~~~~~ll~~~~~~-~~-~~~i~iS 151 (189)
..+.+.++|++|.++|........ ..|....+.+.+++.+. .. -+++++|
T Consensus 94 ~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 94 PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred chhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 457788999999999876544322 25666788888888875 32 2455543
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.72 E-value=0.00031 Score=48.40 Aligned_cols=71 Identities=21% Similarity=0.171 Sum_probs=56.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+++|+|+ |-.|..-++.....|.+|++++++++.++.+.......+..-..+++.+++.++.+|.+|-++.
T Consensus 34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aal 104 (168)
T d1pjca1 34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVL 104 (168)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeee
Confidence 7999996 9999999999999999999999998776544222222334445677889999999999887665
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.70 E-value=0.0015 Score=42.38 Aligned_cols=37 Identities=24% Similarity=0.442 Sum_probs=33.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.++|.+|+++.+.+.-+.
T Consensus 31 ~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l~ 67 (121)
T d1d7ya2 31 SRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLMS 67 (121)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CeEEEECc-chhHHHHHHHhhcccceEEEEeecccccc
Confidence 58999996 99999999999999999999999876554
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.67 E-value=0.0023 Score=42.02 Aligned_cols=34 Identities=21% Similarity=0.160 Sum_probs=27.6
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcC-CcEEEEecCC
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQG-LEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g-~~v~~~~r~~ 35 (189)
++|.|.|++ +..|..+.+.|.+.+ ++|+.+..+.
T Consensus 9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~ 46 (129)
T d2csua1 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE 46 (129)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC
T ss_pred CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc
Confidence 589999998 888999999987665 6788776553
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.65 E-value=0.0063 Score=39.01 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=28.4
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
|+|.|.|++ +..|..+.+.|++.||+|+.+..+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~ 37 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 37 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence 689999988 678999999999999998877543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.00018 Score=50.55 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=26.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEE-EecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCT-LLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~-~~r~ 34 (189)
.+|+|+||+|.+|...++.....|.++++ .+++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~ 65 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT 65 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccch
Confidence 36999999999999999888778976554 4444
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.64 E-value=0.01 Score=39.81 Aligned_cols=34 Identities=24% Similarity=0.440 Sum_probs=29.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRD 34 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~ 34 (189)
||+|.|+|+||.||...++-+.+. .++|.+++-.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 689999999999999999998775 5788888654
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.001 Score=46.86 Aligned_cols=37 Identities=22% Similarity=0.351 Sum_probs=33.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++|.|.|+ |.+|+.++..++..|++|++++++++.++
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~ 41 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA 41 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence 58999996 99999999999999999999999876544
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.58 E-value=0.002 Score=41.26 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=32.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+.
T Consensus 23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~il~ 59 (117)
T d1ebda2 23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEILS 59 (117)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECC-CccceeeeeeecccccEEEEEEecceecc
Confidence 58999996 99999999999999999999998875443
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.57 E-value=0.0019 Score=41.84 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=33.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+.
T Consensus 24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~l~ 60 (122)
T d1v59a2 24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQIGA 60 (122)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSSS
T ss_pred CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccccch
Confidence 58999996 99999999999999999999999876554
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.56 E-value=0.0054 Score=42.77 Aligned_cols=67 Identities=13% Similarity=0.027 Sum_probs=48.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLR 76 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 76 (189)
+++.|.| .|.||+.++++|..-|.+|...+|......... ........++.+.++.+|.+.+++++.
T Consensus 45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-------~~~~~~~~~l~~~l~~sD~v~~~~plt 111 (188)
T d2naca1 45 MHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-------ELNLTWHATREDMYPVCDVVTLNCPLH 111 (188)
T ss_dssp CEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-------HHTCEECSSHHHHGGGCSEEEECSCCC
T ss_pred cceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc-------cccccccCCHHHHHHhccchhhccccc
Confidence 5789999 599999999999888999999998754322110 111223456778899999888777653
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.56 E-value=0.0021 Score=41.72 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=32.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+.
T Consensus 31 k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~l~ 67 (123)
T d1nhpa2 31 NNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRPLG 67 (123)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcccc
Confidence 58999996 99999999999999999999998865443
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.51 E-value=0.0047 Score=41.63 Aligned_cols=50 Identities=16% Similarity=0.006 Sum_probs=31.9
Q ss_pred HHHHhcCCCEEEEeeccCCCCCC-----cceehhhHHHHHHHHHHC-Ccc-EEEEec
Q psy3626 102 VKKAIEGKDGVVVALGTRNDLSP-----TTVMSEGMKNIVTAMKEY-NVS-VVSVCL 151 (189)
Q Consensus 102 ~~~~~~~~d~vv~~~~~~~~~~~-----~~~~~~~~~~ll~~~~~~-~~~-~~i~iS 151 (189)
..+.+.++|++|.++|....... ...|..-.+.+.+.+.+. +.. .++.+|
T Consensus 73 ~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 73 EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 34677889999999987654422 235666677777777664 433 344443
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.0023 Score=41.00 Aligned_cols=37 Identities=22% Similarity=0.235 Sum_probs=32.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+.
T Consensus 22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~l~ 58 (116)
T d1gesa2 22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAPLP 58 (116)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECC-ChhhHHHHHHhhccccEEEEEeecchhhh
Confidence 58999996 99999999999999999999999875443
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.44 E-value=0.00062 Score=47.02 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=33.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
.+|+|+||+|.+|..++......|.+|+++++++++.+
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~ 67 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 67 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CEEEEEccccccchHHHHHHHHhCCeEeecccchHHHH
Confidence 37999999999999999888888999999999876544
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.44 E-value=0.002 Score=41.73 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=30.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus 33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 57899996 99999999999999999999988754
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=96.44 E-value=0.0016 Score=44.05 Aligned_cols=34 Identities=29% Similarity=0.552 Sum_probs=29.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRD 34 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~ 34 (189)
||+|.|+|+||.||...+.-+.+. .++|.++.-.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 899999999999999999988876 5788877654
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0044 Score=42.22 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=45.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++|.| .|.+|+.+++.|...|.+|++..++|-..-+. ..|-.....+++++..+|.++.+++
T Consensus 25 k~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A--------~~dG~~v~~~~~a~~~adivvtaTG 88 (163)
T d1li4a1 25 KVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQA--------AMEGYEVTTMDEACQEGNIFVTTTG 88 (163)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--------HHTTCEECCHHHHTTTCSEEEECSS
T ss_pred CEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHh--------hcCceEeeehhhhhhhccEEEecCC
Confidence 6899999 89999999999999999999999876322110 0122222345677778887776666
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=96.40 E-value=0.0017 Score=47.44 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=31.3
Q ss_pred Cce---EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 1 MKK---IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~~---i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|++ |+|+|| |.+|..++.+|.++|++|+++.+.+
T Consensus 1 m~~~~DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 1 MKRHYEAVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp CCSEEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCccCCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 775 999996 9999999999999999999999864
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.39 E-value=0.0085 Score=39.69 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=29.0
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++|.|.|++ +..|..+++.|.+.|++|+.+..+
T Consensus 20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~ 55 (139)
T d2d59a1 20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK 55 (139)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence 689999998 789999999999999998877654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.37 E-value=0.0027 Score=40.84 Aligned_cols=36 Identities=25% Similarity=0.422 Sum_probs=32.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|.|| |++|-.++..|...|.+|+++.|.+.-+
T Consensus 23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~il 58 (117)
T d1onfa2 23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRIL 58 (117)
T ss_dssp SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CEEEEECC-chHHHHHHHHHHhccccceeeehhcccc
Confidence 68999996 9999999999999999999999986544
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.35 E-value=0.0089 Score=41.76 Aligned_cols=66 Identities=11% Similarity=0.059 Sum_probs=48.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.||+.+++.+..-|.+|.++++......... .......++++++++.+|.+..++++
T Consensus 48 ~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-------~~~~~~~~~l~~ll~~sD~v~l~~pl 113 (191)
T d1gdha1 48 KTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-------SYQATFHDSLDSLLSVSQFFSLNAPS 113 (191)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred cceEEee-cccchHHHHHHHHhhccccccccccccccchhh-------cccccccCCHHHHHhhCCeEEecCCC
Confidence 5899999 599999999999888999999987654332110 01112335678899999988877765
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.34 E-value=0.0028 Score=40.51 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=32.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+.
T Consensus 22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~il~ 58 (115)
T d1lvla2 22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERILP 58 (115)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccccc
Confidence 58999996 99999999999999999999998865443
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.0034 Score=40.74 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=32.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|.|| |++|-.++..|...|.+|+++.|.+.-+
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~l 58 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKVL 58 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccccc
Confidence 68999996 9999999999999999999999986544
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.26 E-value=0.0041 Score=39.99 Aligned_cols=37 Identities=32% Similarity=0.384 Sum_probs=32.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+.
T Consensus 23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ll~ 59 (119)
T d3lada2 23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKFLP 59 (119)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecccCC
Confidence 58999996 99999999999999999999998865443
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.25 E-value=0.0027 Score=45.46 Aligned_cols=33 Identities=33% Similarity=0.582 Sum_probs=30.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
+||+|.|| |..|...+..|.++|++|+++.|..
T Consensus 7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 47999996 9999999999999999999999864
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.25 E-value=0.0013 Score=45.58 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=30.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
+|+|+|+ |.+|...+..+...|. +|+++++++++.+
T Consensus 31 ~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~ 67 (182)
T d1vj0a2 31 TVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK 67 (182)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred EEEEECC-Cccchhheeccccccccccccccccccccc
Confidence 7999996 9999999888888897 7999998766543
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=96.20 E-value=0.013 Score=37.96 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=28.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHc-CCcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~~~~~ 39 (189)
+++|.|| |.+|+.+++.+..+ ++++.+...+.....
T Consensus 5 ~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~ 41 (126)
T d2dt5a2 5 GLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKV 41 (126)
T ss_dssp EEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTT
T ss_pred eEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhc
Confidence 7999996 99999999987644 788888876544443
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.20 E-value=0.0039 Score=40.94 Aligned_cols=37 Identities=24% Similarity=0.412 Sum_probs=33.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.+.+.-+.
T Consensus 36 k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~l~ 72 (133)
T d1q1ra2 36 NRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARVLE 72 (133)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CEEEEECC-chHHHHHHHHHHhhCcceeeeeecccccc
Confidence 58999996 99999999999999999999999876544
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.19 E-value=0.0033 Score=40.67 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=29.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 47999996 999999999999999999999875
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.18 E-value=0.0033 Score=43.10 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=34.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSE 41 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~ 41 (189)
+|+|+||+|.+|...+......|.+|+++++++++.+.+
T Consensus 26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~ 64 (167)
T d1tt7a2 26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL 64 (167)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence 699999999999999988777899999999998776543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.17 E-value=0.0049 Score=42.04 Aligned_cols=36 Identities=31% Similarity=0.409 Sum_probs=29.9
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
+++|.|+ |.+|...+..+...|. +|++.++++.+++
T Consensus 29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~ 65 (171)
T d1pl8a2 29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS 65 (171)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHH
Confidence 7899986 9999999988888898 7999888866554
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.11 E-value=0.0034 Score=40.65 Aligned_cols=37 Identities=30% Similarity=0.350 Sum_probs=33.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+.
T Consensus 26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l~ 62 (123)
T d1dxla2 26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIVP 62 (123)
T ss_dssp SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccCc
Confidence 58999996 99999999999999999999999876654
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.06 E-value=0.012 Score=40.57 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=27.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRD 34 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~ 34 (189)
|.||.|-| .|.||+.+++.+.++ +.+++.+...
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT 34 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence 88999999 799999999999987 5677777543
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.98 E-value=0.0087 Score=40.62 Aligned_cols=64 Identities=19% Similarity=0.174 Sum_probs=45.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++|.| -|.+|+-++++|...|.+|++.-.+|-..-+. ..|=..-..++++++.+|.++.+++
T Consensus 24 k~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA--------~mdGf~v~~~~~a~~~aDi~vTaTG 87 (163)
T d1v8ba1 24 KIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQA--------VMEGFNVVTLDEIVDKGDFFITCTG 87 (163)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH--------HTTTCEECCHHHHTTTCSEEEECCS
T ss_pred CEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHH--------HhcCCccCchhHccccCcEEEEcCC
Confidence 6889999 79999999999999999999998876322110 1111222345677788888777766
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.98 E-value=0.019 Score=39.76 Aligned_cols=64 Identities=14% Similarity=0.105 Sum_probs=46.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|.| .|.+|+.+++.+..-|.+|.+.++........ ... ....+++++++.+|++++++++
T Consensus 45 k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~~~--------~~~~~l~ell~~sDiv~~~~Pl 108 (184)
T d1ygya1 45 KTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-QLG--------IELLSLDDLLARADFISVHLPK 108 (184)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-HHT--------CEECCHHHHHHHCSEEEECCCC
T ss_pred eeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHh-hcC--------ceeccHHHHHhhCCEEEEcCCC
Confidence 5788999 59999999999987799999998865432211 011 1224577889999988877765
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=95.94 E-value=0.0044 Score=44.65 Aligned_cols=35 Identities=29% Similarity=0.485 Sum_probs=31.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
+||+|.|| |..|..++..|.++|++|+++.|+++.
T Consensus 5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQP 39 (265)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 58999997 999999999999999999999987653
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.94 E-value=0.0035 Score=46.09 Aligned_cols=34 Identities=38% Similarity=0.524 Sum_probs=31.5
Q ss_pred Cc-eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 1 MK-KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~-~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|| +|+|.|| |..|..++..|.+.|++|.++.|++
T Consensus 1 mk~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~ 35 (292)
T d1k0ia1 1 MKTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT 35 (292)
T ss_dssp CBCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 77 6999997 9999999999999999999999875
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.92 E-value=0.057 Score=38.72 Aligned_cols=117 Identities=14% Similarity=0.111 Sum_probs=68.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|++++..|...|. ++++++.+.-..+.+.+. .-+-..|+-. .+.+++.++...+
T Consensus 31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ-~l~~~~diG~~K~~~a~~~l~~~np---------- 98 (247)
T d1jw9b_ 31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQ-TLHSDATVGQPKVESARDALTRINP---------- 98 (247)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTC-TTCCGGGTTSBHHHHHHHHHHHHCT----------
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhh-ccccHhhcCchHHHHHHHHHHHhhc----------
Confidence 48999995 9999999999999986 677777665554444222 1122234433 3444454544321
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEE
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSV 149 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~ 149 (189)
.-++..+...+ +.......+...|+++.+.. +...-..+-+.|.+.+.. +|+
T Consensus 99 -------~~~i~~~~~~~-~~~~~~~~~~~~divid~~d----------~~~~~~~in~~~~~~~ip-~i~ 150 (247)
T d1jw9b_ 99 -------HIAITPVNALL-DDAELAALIAEHDLVLDCTD----------NVAVRNQLNAGCFAAKVP-LVS 150 (247)
T ss_dssp -------TSEEEEECSCC-CHHHHHHHHHTSSEEEECCS----------SHHHHHHHHHHHHHHTCC-EEE
T ss_pred -------ccchhhhhhhh-hhccccccccccceeeeccc----------hhhhhhhHHHHHHHhCCC-ccc
Confidence 11333333333 44556677888999988742 233344555667777653 443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.92 E-value=0.009 Score=40.73 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=41.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+++|.|.+.-+|+.++..|.++|.+|+...+... .++...+.+|+++.+++
T Consensus 38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~~~~~~ADivI~a~G 89 (166)
T d1b0aa1 38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVENADLLIVAVG 89 (166)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHHCSEEEECSC
T ss_pred ceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhHHHHhhhhHhhhhcc
Confidence 68999999999999999999999999988765432 23455677888777766
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.91 E-value=0.0049 Score=42.45 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=30.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~ 36 (189)
+||+|.|| |..|-..+..|.++|+ +|+++.|.+.
T Consensus 5 ~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 5 AKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 68999996 9999999999999998 5999988754
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.89 E-value=0.0036 Score=43.30 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=33.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
+++|+||+|.+|...++.....|.+|++++|++++.+
T Consensus 34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~ 70 (177)
T d1o89a2 34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE 70 (177)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHH
Confidence 7999999999999998888888999999999876654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.89 E-value=0.0048 Score=46.48 Aligned_cols=34 Identities=29% Similarity=0.369 Sum_probs=31.0
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
+|+|+|+|| |..|..+|.+|.+.|++|.++-++.
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence 589999996 9999999999999999999998775
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.84 E-value=0.0045 Score=44.88 Aligned_cols=33 Identities=30% Similarity=0.526 Sum_probs=30.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|||+|+|| |.-|-..+.+|.++|++|+++-+++
T Consensus 2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 79999996 9999999999999999999998764
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=95.80 E-value=0.002 Score=44.48 Aligned_cols=36 Identities=19% Similarity=0.377 Sum_probs=28.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
+|+|.|+ |.+|...+..+...|. +|+++++++++.+
T Consensus 30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~ 66 (174)
T d1jqba2 30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVE 66 (174)
T ss_dssp CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHH
T ss_pred EEEEEcC-CcchhhhhhhhhcccccccccccchhhhHH
Confidence 6899986 9999888888777786 6888888765443
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.80 E-value=0.0071 Score=39.24 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=32.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+.|.+|+++.+.+.-+.
T Consensus 27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~il~ 63 (125)
T d1ojta2 27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 63 (125)
T ss_dssp SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccccc
Confidence 58999996 99999999999999999999999865544
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.78 E-value=0.017 Score=39.56 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=30.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+++|.|.+.-+|+.++..|.++|..|+.+....
T Consensus 40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t 73 (170)
T d1a4ia1 40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 73 (170)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred ceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence 6899999999999999999999999999887654
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=95.78 E-value=0.0045 Score=44.85 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=30.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|+|+|| |..|...+.+|.++|++|+++-+++
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 57999996 9999999999999999999998764
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=95.77 E-value=0.045 Score=37.02 Aligned_cols=61 Identities=23% Similarity=0.331 Sum_probs=38.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHc-CCcEEEEec-CCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ-GLEVCTLLR-DPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+.|.| .|.+|+..++.|.+. +.+++++.. +++.... .. .. ...+.....++.|.++++++
T Consensus 5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~---~~--~~-----~~~~~~~~~~~~D~Vvi~tp 67 (170)
T d1f06a1 5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK---TP--VF-----DVADVDKHADDVDVLFLCMG 67 (170)
T ss_dssp EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS---SC--EE-----EGGGGGGTTTTCSEEEECSC
T ss_pred eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccccc---cc--cc-----cchhhhhhccccceEEEeCC
Confidence 689999 699999999999876 677766544 4332221 11 11 12233445567787776665
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=95.72 E-value=0.004 Score=42.39 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=48.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
.+|+|.|+ |.+|...+..+...|.+++++++++++.+....-+.. ...|..+++......+++|.++-+++
T Consensus 32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad-~~i~~~~~~~~~~~~~~~D~vid~~g 102 (168)
T d1uufa2 32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD-EVVNSRNADEMAAHLKSFDFILNTVA 102 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS-EEEETTCHHHHHTTTTCEEEEEECCS
T ss_pred CEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCc-EEEECchhhHHHHhcCCCceeeeeee
Confidence 37999986 9999988888777899999998887665432222222 12355566666666677887776665
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.65 E-value=0.006 Score=45.99 Aligned_cols=35 Identities=37% Similarity=0.510 Sum_probs=30.7
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC--CcEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG--LEVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g--~~v~~~~r~~~ 36 (189)
||+|+|+|| |..|-.++..|+++| ++|+++-|+..
T Consensus 4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 789999996 999999999999875 69999988753
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.64 E-value=0.0059 Score=45.54 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=31.3
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|..++|+|| |..|..++++|.+.|++|.++-+++
T Consensus 1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence 788999996 9999999999999999999998764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.64 E-value=0.0077 Score=41.68 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=31.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
|+|+|.|| |..|-..+..|.++||+|+++.+.+.
T Consensus 44 k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 44 KNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred cEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 68999996 99999999999999999999998753
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.64 E-value=0.011 Score=37.82 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=32.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
++++|.|| |++|-.++..|.+.|.+|+++.|.+.-+
T Consensus 23 ~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~l 58 (121)
T d1mo9a2 23 STVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPLK 58 (121)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhcchhheEeeccchhh
Confidence 57999996 9999999999999999999999986544
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=95.60 E-value=0.0063 Score=41.71 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=32.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
++++|+|+ |+.+++++..|.+.+.+|+++.|+.++...
T Consensus 19 k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~ 56 (171)
T d1p77a1 19 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKE 56 (171)
T ss_dssp CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHH
Confidence 58999995 999999999999888899999999765543
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=95.54 E-value=0.005 Score=42.81 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=30.3
Q ss_pred eEEE-EcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 3 KIAI-FGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~I-tGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
+++| .||+|.+|...+......|.+|+++.|+++..+
T Consensus 31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~ 68 (189)
T d1gu7a2 31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68 (189)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccc
Confidence 4666 589999999999888788999999998765543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.53 E-value=0.013 Score=39.90 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=30.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~ 39 (189)
+|+|.|+ |.+|...+..+...| .+|++.++++++.+
T Consensus 31 tVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~ 67 (176)
T d2jhfa2 31 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA 67 (176)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred EEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHH
Confidence 7999998 789999999998887 58888888876654
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.50 E-value=0.0033 Score=42.85 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=30.7
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~ 39 (189)
+++|.|++|.+|...+..+...| .+|++..+++++.+
T Consensus 30 ~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~ 67 (170)
T d1jvba2 30 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE 67 (170)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH
T ss_pred EEEEEeccccceeeeeecccccccccccccccchhhHH
Confidence 79999999999999998888888 47888888765444
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=95.32 E-value=0.01 Score=39.94 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=28.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~ 35 (189)
|||+|.|| |++|-.++..|.+.+. +|+++.+++
T Consensus 3 krivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 3 RKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 79999997 9999999999998874 678877665
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.20 E-value=0.077 Score=36.13 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=24.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEe
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLL 32 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~ 32 (189)
+||.|-| -|.||+.+++.++++ +.++..+.
T Consensus 3 irIaING-fGRIGR~v~Ral~~~~dieiVaIN 33 (172)
T d2czca2 3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGIT 33 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEE
T ss_pred EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEe
Confidence 4899999 599999999999876 45666554
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=95.17 E-value=0.088 Score=35.79 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=26.2
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC-CcEEEEec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG-LEVCTLLR 33 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r 33 (189)
|++|.|-| -|.||+.+++.+..++ .++..+..
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd 33 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK 33 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence 89999999 6999999999988774 56665543
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=95.13 E-value=0.0098 Score=43.79 Aligned_cols=33 Identities=33% Similarity=0.464 Sum_probs=30.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|+|+|| |..|-..+..|.++|++|+++.+.+
T Consensus 31 kkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 31 KHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 68999996 9999999999999999999998764
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.07 E-value=0.016 Score=39.74 Aligned_cols=36 Identities=22% Similarity=0.468 Sum_probs=29.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
+|+|+|+ |.+|...+..+...|. +|++.++++++.+
T Consensus 31 ~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~ 67 (174)
T d1e3ia2 31 TCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP 67 (174)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred EEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH
Confidence 7899985 9999999999888897 5777777766543
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.05 E-value=0.0089 Score=39.85 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=29.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
|+++|+|| |.+|..-++.|++.|.+|++++..
T Consensus 14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 68999997 999999999999999999999754
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.96 E-value=0.0099 Score=40.07 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=29.9
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~ 39 (189)
+|+|.|+ |.+|...+..+...|.+|+++++++++..
T Consensus 30 ~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~ 65 (168)
T d1rjwa2 30 WVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE 65 (168)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred EEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhh
Confidence 7888875 99999888888888999999988876554
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.90 E-value=0.016 Score=41.23 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=30.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
++|+|.|| |..|...+..|.++|++|+++.+++.
T Consensus 50 k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 50 DSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 58999996 99999999999999999999987653
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.90 E-value=0.026 Score=44.24 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=56.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccCh--hHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLKL--ADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.||+|.|+ |++|..+++.|...|. ++++++.+.-..+.+.+. .-+-.-|+-.+ +.+++.++...+
T Consensus 38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQ-flf~~~diG~~Ka~~a~~~l~~~np---------- 105 (426)
T d1yovb1 38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ-FLFRPKDIGRPKAEVAAEFLNDRVP---------- 105 (426)
T ss_dssp CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTC-TTCCGGGTTSBHHHHHHHHHHHHST----------
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhccc-ccCChhHcCcHHHHHHHHHHHhhCC----------
Confidence 37999997 8899999999999987 788888765444443221 11223344332 333333333211
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEee
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVAL 116 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~ 116 (189)
.-++......+.+.. .+.+.+.|+|+.+.
T Consensus 106 -------~v~i~~~~~~i~~~~--~~~~~~~DlVi~~~ 134 (426)
T d1yovb1 106 -------NCNVVPHFNKIQDFN--DTFYRQFHIIVCGL 134 (426)
T ss_dssp -------TCCCEEECSCGGGBC--HHHHTTCSEEEECC
T ss_pred -------CCceEeeeccccchH--HHHHHhcchheecc
Confidence 114445555554332 35678899999875
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=94.80 E-value=0.018 Score=39.15 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=32.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~ 40 (189)
++|+|+|+ |+.|++++..|.+.|. ++.++.|++++...
T Consensus 18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~ 56 (167)
T d1npya1 18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQY 56 (167)
T ss_dssp SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHH
Confidence 57999996 9999999999999996 79999998765543
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.79 E-value=0.01 Score=40.57 Aligned_cols=32 Identities=13% Similarity=0.280 Sum_probs=26.5
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
+|+|.|| |++|-.++..|.+.|.++.++.+.+
T Consensus 5 ~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~~ 36 (183)
T d1d7ya1 5 PVVVLGA-GLASVSFVAELRQAGYQGLITVVGD 36 (183)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred CEEEECc-cHHHHHHHHHHHhcCCceEEEEEec
Confidence 6999996 9999999999999887766655543
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.77 E-value=0.018 Score=39.85 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=28.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~ 35 (189)
|||+|.|| |++|-.++..|.+. +.+|+++.|.+
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999997 99999999999886 56788887764
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=94.76 E-value=0.022 Score=38.84 Aligned_cols=36 Identities=19% Similarity=0.426 Sum_probs=30.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
+|+|.|+ |.+|...+..+...|. +|+++++++++++
T Consensus 30 ~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~ 66 (174)
T d1p0fa2 30 TCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP 66 (174)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred EEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHH
Confidence 6999996 9999999999988886 6888888776654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.75 E-value=0.23 Score=33.65 Aligned_cols=74 Identities=14% Similarity=0.000 Sum_probs=49.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC-CcccCCc-eeEEeccc--cChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL-PSEYHSK-VEIIQGDV--LKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~-~~~~~~~-~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
|+++|.|-+.-+|+.++..|+++|..|+......... ....... ......++ ..++.++.....+|++|..++-
T Consensus 30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG~ 107 (171)
T d1edza1 30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPS 107 (171)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccCC
Confidence 6899999999999999999999999998765432110 0000000 01122233 3467799999999999877764
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.63 E-value=0.018 Score=40.12 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=28.7
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|+|| |..|...+..|.++|++|.++-+++
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 799995 9999999999999999999998875
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.52 E-value=0.027 Score=37.43 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=28.4
Q ss_pred eEEEE--cCCChhhHHHHHHHHHcCCcEEEEecCCCC
Q psy3626 3 KIAIF--GATGMTGLCSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 3 ~i~It--GatG~iG~~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
.++|. | .|++|..++..|.+.|.+|+++.+.+.-
T Consensus 41 ~vvi~d~g-gg~ig~e~A~~la~~G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 41 RVVILNAD-TYFMAPSLAEKLATAGHEVTIVSGVHLA 76 (156)
T ss_dssp EEEEEECC-CSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred ceEEEecC-CChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 45554 5 4999999999999999999999987643
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.47 E-value=0.025 Score=38.23 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=28.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
++|+|.|| |++|-.++..|.+.|.+++++.+.+.
T Consensus 4 ~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 4 DNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence 57999996 99999999999999988777766543
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=94.41 E-value=0.023 Score=39.88 Aligned_cols=33 Identities=21% Similarity=0.490 Sum_probs=29.2
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~ 35 (189)
++|+|.|| |..|...+..|.++|+ +|+++-+++
T Consensus 1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 47999996 9999999999999996 699998764
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.34 E-value=0.004 Score=44.21 Aligned_cols=26 Identities=23% Similarity=0.406 Sum_probs=23.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcE
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEV 28 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v 28 (189)
|||+|.|| |-+|..++.+|.++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 57999996 999999999999998764
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=94.32 E-value=0.024 Score=41.69 Aligned_cols=33 Identities=27% Similarity=0.536 Sum_probs=29.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~ 35 (189)
.+|+|+|| |-+|..++.+|.++|+ +|+++.|.+
T Consensus 2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 47999996 9999999999999996 699998874
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.32 E-value=0.0087 Score=40.92 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=25.7
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEE-EEecCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVC-TLLRDPQR 37 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~-~~~r~~~~ 37 (189)
+|+|.|+ |.+|...+..+...|.+++ +.++++.+
T Consensus 31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k 65 (174)
T d1f8fa2 31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR 65 (174)
T ss_dssp EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHH
Confidence 7899997 9999999988877787654 55555443
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=94.32 E-value=0.023 Score=41.20 Aligned_cols=31 Identities=23% Similarity=0.272 Sum_probs=28.8
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|.|| |..|..++.+|.++|++|+++.+..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899996 9999999999999999999999864
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.27 E-value=0.023 Score=38.89 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=31.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~ 39 (189)
+|+|+|+ |.+|...+..+...| .+|+++++++++++
T Consensus 32 tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~ 68 (176)
T d1d1ta2 32 TCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE 68 (176)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred EEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH
Confidence 6899985 999999999998888 47999999877664
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.16 E-value=0.024 Score=38.11 Aligned_cols=38 Identities=29% Similarity=0.335 Sum_probs=31.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
.+|+|.|+ |.+|...+..+...|.+|+++++++.+.+.
T Consensus 29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~ 66 (166)
T d1llua2 29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL 66 (166)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh
Confidence 37899886 999999888777789999999998766553
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=94.07 E-value=0.026 Score=40.96 Aligned_cols=36 Identities=25% Similarity=0.448 Sum_probs=30.3
Q ss_pred CceEEEEcCCChhhHHH-----HHHHHHcCCcEEEEecCCCC
Q psy3626 1 MKKIAIFGATGMTGLCS-----LEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l-----~~~L~~~g~~v~~~~r~~~~ 37 (189)
|++|+|.| -|++|+.. +..|.+.|++|.+++-++..
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q~ 41 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA 41 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 89999998 89999954 45777789999999998753
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.00 E-value=0.03 Score=40.84 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=28.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
+||+|+|| |.-|-..+.+|.++|++|+++-++
T Consensus 6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~ 37 (449)
T d2dw4a2 6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR 37 (449)
T ss_dssp CEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 47999996 999999999999999999998654
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.88 E-value=0.41 Score=30.36 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=32.4
Q ss_pred ceEEEEcCCC----------hhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATG----------MTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG----------~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
++|+|+|+.. +.+.+.++.|.+.|++++.+.-+|+..+.
T Consensus 5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst 53 (121)
T d1a9xa4 5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST 53 (121)
T ss_dssp CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT
T ss_pred CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc
Confidence 6899999633 45778999999999999999998887764
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=93.72 E-value=0.19 Score=34.79 Aligned_cols=24 Identities=25% Similarity=0.501 Sum_probs=20.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL 26 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~ 26 (189)
+||.|.|- |..|..++.+|.+.+.
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~ 24 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGI 24 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCC
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCC
Confidence 47999995 9999999999998753
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=93.71 E-value=0.064 Score=35.64 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=27.8
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~ 38 (189)
||.++| .|.+|..++++|++.|+.+ +..|++++.
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~ 35 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKA 35 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHH
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHH
Confidence 789999 5999999999999888865 567765544
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.59 E-value=0.062 Score=43.22 Aligned_cols=121 Identities=8% Similarity=0.039 Sum_probs=66.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCCcccCCceeEEeccccC--hhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLPSEYHSKVEIIQGDVLK--LADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
.+|+|.|+ |.+|..+++.|...|. ++++++.+.-....+... .-+-.-|+-. .+.+.+.+....+-
T Consensus 26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rq-f~~~~~diGk~ka~~~~~~L~~lNp~--------- 94 (529)
T d1yova1 26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNN-FFLQRSSIGKNRAEAAMEFLQELNSD--------- 94 (529)
T ss_dssp CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHC-TTCCGGGTTSBHHHHHHHHHHTTCTT---------
T ss_pred CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCch-hcCChhhCCCHHHHHHHHHHHHhCCC---------
Confidence 37999996 8999999999999985 677776554333222110 0011123322 23444444443210
Q ss_pred CCCCccccCceeEEeccccCH-HHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccEEEEecc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKL-ADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSVVSVCLS 152 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~i~iSS 152 (189)
-++..+..+..+. +...+.+.+.|+|+.+.. +......+-+.|++.++ .+|+.++
T Consensus 95 --------v~i~~~~~~~~~~~~~~~~~~~~~dvVv~~~~----------~~~~~~~l~~~c~~~~i-p~i~~~~ 150 (529)
T d1yova1 95 --------VSGSFVEESPENLLDNDPSFFCRFTVVVATQL----------PESTSLRLADVLWNSQI-PLLICRT 150 (529)
T ss_dssp --------SBCCEESSCHHHHHHSCGGGGGGCSEEEEESC----------CHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred --------CcEEEEcCCchhhhhhHHHHhcCCCEEEECCC----------CHHHHHHHHHHHHHcCC-CEEEEec
Confidence 0233333332211 111245677899988742 34555667888888876 4665544
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.58 E-value=0.048 Score=38.97 Aligned_cols=34 Identities=32% Similarity=0.424 Sum_probs=30.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~ 36 (189)
++|+|.|| |..|..++..|.+.|. +|+++-|++.
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 58999997 9999999999999995 8889888754
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.47 E-value=0.041 Score=36.56 Aligned_cols=31 Identities=29% Similarity=0.429 Sum_probs=26.7
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
||+|.|| |++|-.++..|. ++.+|+++.|.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7999996 999999999885 578999998764
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=93.43 E-value=0.073 Score=33.50 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=29.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHH---cCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK---QGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~---~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.+ .|.+|+++.|.+.-+.
T Consensus 19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~il~ 58 (117)
T d1feca2 19 KRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMILR 58 (117)
T ss_dssp SEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSSST
T ss_pred CeEEEECC-ChHHHHHHHHhHhhcccccccceecccccccc
Confidence 58999997 9999999987654 3889999998865543
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=93.37 E-value=0.24 Score=33.42 Aligned_cols=36 Identities=33% Similarity=0.387 Sum_probs=24.5
Q ss_pred ceEEEEcCCChhhHHH--HHHHHHc----CCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCS--LEAALKQ----GLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l--~~~L~~~----g~~v~~~~r~~~~~ 38 (189)
|||.|.|| |.+|..+ +..|+.. +.++..++++++++
T Consensus 3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~ 44 (171)
T d1obba1 3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERL 44 (171)
T ss_dssp CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHH
T ss_pred cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHH
Confidence 68999996 9888653 3334332 35888888876544
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.30 E-value=0.08 Score=36.66 Aligned_cols=36 Identities=31% Similarity=0.348 Sum_probs=27.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~~ 39 (189)
+|+|+|+ |.+|...+..+...|. +|++.++++++++
T Consensus 28 tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~ 64 (195)
T d1kola2 28 TVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLA 64 (195)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred EEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhH
Confidence 7999985 9999877777766765 7888887765543
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.23 E-value=0.062 Score=33.93 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=28.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHH---cCCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK---QGLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~---~g~~v~~~~r~~~~~ 38 (189)
++++|.|| |++|-.++..|.. ++.+|+++.|.+.-+
T Consensus 21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL 59 (117)
T d1aoga2 21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMIL 59 (117)
T ss_dssp SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSS
T ss_pred CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhh
Confidence 58999997 9999999976654 356899999876544
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.20 E-value=0.069 Score=34.71 Aligned_cols=37 Identities=30% Similarity=0.352 Sum_probs=30.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHH----cCCcEEEEecCCCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK----QGLEVCTLLRDPQRLP 39 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~----~g~~v~~~~r~~~~~~ 39 (189)
++++|.|| |++|-.++..|.. .|.+|+.+.+.+.-+.
T Consensus 38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l~ 78 (137)
T d1m6ia2 38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGNMG 78 (137)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccCCc
Confidence 57999996 9999999988853 4899999998766554
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=93.19 E-value=0.038 Score=38.32 Aligned_cols=31 Identities=26% Similarity=0.272 Sum_probs=25.3
Q ss_pred ceEEEEcCCC-hhhH-----HHHHHHHHcCCcEEEEec
Q psy3626 2 KKIAIFGATG-MTGL-----CSLEAALKQGLEVCTLLR 33 (189)
Q Consensus 2 ~~i~ItGatG-~iG~-----~l~~~L~~~g~~v~~~~r 33 (189)
|+++|+| || ++|+ .|++.|.++|++|.+++-
T Consensus 2 ~~~~i~g-t~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTG-TDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 7899999 56 9998 556777788999999863
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=93.10 E-value=0.038 Score=37.30 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=26.5
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
+|+|.|+ |.+|...+..+...|. .|++.++++++.
T Consensus 31 tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~ 66 (176)
T d2fzwa2 31 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF 66 (176)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred EEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH
Confidence 7899997 7899888888888886 566666665544
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=93.06 E-value=0.29 Score=32.38 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=57.3
Q ss_pred ceEEEEcCCChhhHH-HHHHHHHc-CCcEEEEe-cCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecccCCC
Q psy3626 2 KKIAIFGATGMTGLC-SLEAALKQ-GLEVCTLL-RDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLLRDP 78 (189)
Q Consensus 2 ~~i~ItGatG~iG~~-l~~~L~~~-g~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (189)
++|.|.| +|.+|+. .+..+... +.+++++. ++++........ +.... .+.++.++++.|.++++++.
T Consensus 2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~----~~~~~--~~~~~~l~~~~D~V~I~tp~--- 71 (164)
T d1tlta1 2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES----WRIPY--ADSLSSLAASCDAVFVHSST--- 71 (164)
T ss_dssp EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH----HTCCB--CSSHHHHHTTCSEEEECSCT---
T ss_pred CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhc----ccccc--cccchhhhhhcccccccccc---
Confidence 5899999 5999976 45555544 67776554 555443322110 01111 12233445667776655541
Q ss_pred CCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 79 QRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
-...+.+..+++.--.|+. +.|...+..-.+.+++++++.+.
T Consensus 72 -----------------~~h~~~~~~al~~gk~V~~-------EKPla~~~~e~~~l~~~a~~~~~ 113 (164)
T d1tlta1 72 -----------------ASHFDVVSTLLNAGVHVCV-------DKPLAENLRDAERLVELAARKKL 113 (164)
T ss_dssp -----------------THHHHHHHHHHHTTCEEEE-------ESSSCSSHHHHHHHHHHHHHTTC
T ss_pred -----------------hhccccccccccccceeec-------cccccCCHHHHHHHHHHHHHcCC
Confidence 0122333344433222322 12333467778889999998874
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=93.05 E-value=0.057 Score=40.03 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=29.8
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
.|+|+|| |..|..++.+|.++|.+|+++.+.++
T Consensus 9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 5899997 99999999999999999999988643
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.87 E-value=0.057 Score=39.71 Aligned_cols=31 Identities=23% Similarity=0.496 Sum_probs=28.3
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|+|| |..|-..+.+|.++|++|+++-++.
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 789996 9999999999999999999998754
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=92.79 E-value=0.097 Score=35.02 Aligned_cols=34 Identities=29% Similarity=0.339 Sum_probs=22.6
Q ss_pred ceEEEEcCCChhhHHHHHHHHH-c-CCcEEEE-ecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALK-Q-GLEVCTL-LRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~-~-g~~v~~~-~r~~~ 36 (189)
.|+.|.| +|.+|+.+...+++ . ..++..+ +|+++
T Consensus 5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~ 41 (157)
T d1nvmb1 5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA 41 (157)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence 3799999 89999975544444 3 4466666 45443
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.77 E-value=0.077 Score=37.13 Aligned_cols=37 Identities=22% Similarity=0.163 Sum_probs=30.6
Q ss_pred CceEEEEcCCChhhH-----HHHHHHHHcCCcEEEEecCCCC
Q psy3626 1 MKKIAIFGATGMTGL-----CSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 1 m~~i~ItGatG~iG~-----~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
||.|.|+++-|++|+ +++..|.++|++|.+++-++..
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~~ 42 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITM 42 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 899999999999998 4556677789999999877543
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.39 E-value=0.076 Score=37.24 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=29.7
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc--CCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ--GLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~--g~~v~~~~r~~~ 36 (189)
+||+|+|| |..|...+..|.+. |++|+++.+.+.
T Consensus 2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 68999996 99999999999876 789999988753
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.36 E-value=0.061 Score=36.59 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=30.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
++++|+|+ |+.+++++..|.+.| +|+++.|++++.+.
T Consensus 19 k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~ 55 (177)
T d1nvta1 19 KNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEA 55 (177)
T ss_dssp CEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHH
Confidence 58999995 999999999987666 89999998766543
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=92.15 E-value=0.17 Score=32.84 Aligned_cols=34 Identities=24% Similarity=0.184 Sum_probs=28.5
Q ss_pred ceEEEEcCC---ChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGAT---GMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGat---G~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|.|.|+| +..|..+.+.|.+.|+++..+--++
T Consensus 14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~ 50 (136)
T d1iuka_ 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRF 50 (136)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGG
T ss_pred CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecc
Confidence 579999998 5578999999999999988876543
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.13 E-value=0.099 Score=36.58 Aligned_cols=36 Identities=14% Similarity=0.112 Sum_probs=24.7
Q ss_pred eEEEEcCCChhhHHHH----HHHHHc-----CCcEEEEecCCCCC
Q psy3626 3 KIAIFGATGMTGLCSL----EAALKQ-----GLEVCTLLRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~----~~L~~~-----g~~v~~~~r~~~~~ 38 (189)
+++|+||||.+.+.-+ -+|... +..|+++.|++-..
T Consensus 22 t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~ 66 (203)
T d1qkia1 22 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTV 66 (203)
T ss_dssp EEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSC
T ss_pred EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCH
Confidence 5899999999987422 122233 46799999986543
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.02 E-value=0.44 Score=33.23 Aligned_cols=24 Identities=25% Similarity=0.462 Sum_probs=20.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL 26 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~ 26 (189)
.||.|.|- |..|..++.+|.+.+.
T Consensus 16 ~ki~ViGv-GGaG~n~v~~l~~~~~ 39 (209)
T d2vapa1 16 AKITVVGC-GGAGNNTITRLKMEGI 39 (209)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHTC
T ss_pred CcEEEEEe-CChHHHHHHHHHHcCC
Confidence 37999995 9999999999998864
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=91.95 E-value=0.094 Score=37.04 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=29.6
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
-|+|.|| |..|...+..|.++|++|.++.+.+.
T Consensus 4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3899996 99999999999999999999988753
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=91.60 E-value=0.19 Score=30.10 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=27.6
Q ss_pred ceEEEEcCCChhhH-HHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGL-CSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~-~l~~~L~~~g~~v~~~~r~~~ 36 (189)
|||-++|- |++|- .|++.|.++|+.|.+.++.++
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~ 36 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET 36 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 57888886 66665 778888889999999998753
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=91.57 E-value=0.0025 Score=42.65 Aligned_cols=63 Identities=19% Similarity=0.008 Sum_probs=34.0
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|.+.| +|.+|+++++.|.+.++.+.+..|++++...+...... .. .+..++++.+|.++.++.
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~----~~---~~~~~~~~~~DiVil~v~ 64 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG----KA---ATLEKHPELNGVVFVIVP 64 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC----CC---CSSCCCCC---CEEECSC
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc----cc---cchhhhhccCcEEEEecc
Confidence 56788 69999999988755444456888987766544221110 01 112244566777766653
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.49 E-value=0.36 Score=33.40 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=26.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
|||+++| ++..|..+++.|++.|++|.++.-.
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~ 32 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTH 32 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 5788887 5778999999999999999776543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=91.45 E-value=0.13 Score=35.93 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=30.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
++|+|-| -|.+|+++++.|.+.|.+|++.+.++..
T Consensus 28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~ 62 (201)
T d1c1da1 28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER 62 (201)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHH
Confidence 5899999 6999999999999999999988766443
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=91.41 E-value=0.24 Score=31.77 Aligned_cols=39 Identities=26% Similarity=0.387 Sum_probs=31.9
Q ss_pred ceEEEEcCCC----------hhhHHHHHHHHHcCCcEEEEecCCCCCCc
Q psy3626 2 KKIAIFGATG----------MTGLCSLEAALKQGLEVCTLLRDPQRLPS 40 (189)
Q Consensus 2 ~~i~ItGatG----------~iG~~l~~~L~~~g~~v~~~~r~~~~~~~ 40 (189)
++|+|+|+.. +.+.+.++.|.+.|++++.+.-+|...+.
T Consensus 8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVst 56 (127)
T d1a9xa3 8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMT 56 (127)
T ss_dssp CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGG
T ss_pred CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhc
Confidence 5899999733 34778899999999999999988877654
|
| >d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Azotobacter vinelandii [TaxId: 354]
Probab=91.39 E-value=0.11 Score=37.94 Aligned_cols=36 Identities=31% Similarity=0.451 Sum_probs=30.0
Q ss_pred CceEEEEcCCChhhHH-----HHHHHHHcCCcEEEEecCCCC
Q psy3626 1 MKKIAIFGATGMTGLC-----SLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 1 m~~i~ItGatG~iG~~-----l~~~L~~~g~~v~~~~r~~~~ 37 (189)
|++|+|.| =|++|+. ++..|.++|++|.+++-+++.
T Consensus 2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ~ 42 (289)
T d2afhe1 2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKA 42 (289)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSS
T ss_pred ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 88999987 8999984 566788889999999988753
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.35 E-value=0.046 Score=37.14 Aligned_cols=49 Identities=14% Similarity=0.106 Sum_probs=30.0
Q ss_pred HHHHhcCCCEEEEeeccCCCCCC-------------------------cceehhhHHHHHHHHHHCCccEEEEe
Q psy3626 102 VKKAIEGKDGVVVALGTRNDLSP-------------------------TTVMSEGMKNIVTAMKEYNVSVVSVC 150 (189)
Q Consensus 102 ~~~~~~~~d~vv~~~~~~~~~~~-------------------------~~~~~~~~~~ll~~~~~~~~~~~i~i 150 (189)
..+.+.++|++|++++....... ..-|+...+.+.+.+++.....++++
T Consensus 71 ~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~ 144 (169)
T d1s6ya1 71 RRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLIN 144 (169)
T ss_dssp HHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred chhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEE
Confidence 35567788888888876432100 01244556777788888776655554
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.14 E-value=1.4 Score=30.35 Aligned_cols=103 Identities=19% Similarity=0.202 Sum_probs=60.2
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC---cEEEEecCCCCCCcccCCceeEEecc-c-------cChhHHHHhhhcCcceee
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL---EVCTLLRDPQRLPSEYHSKVEIIQGD-V-------LKLADVKKAIEGKDGLEV 71 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~d-~-------~~~~~~~~~~~~~~~~~~ 71 (189)
+|-|.|- |..|..++.+|.+.+. +.+++.-+.+.+.... ...++.-+. + .+|+.-+.+.+
T Consensus 3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~-~~~ki~iG~~~~~g~G~gg~p~~g~~aa~------- 73 (198)
T d1ofua1 3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIA-ARTVLQLGPGVTKGLGAGANPEVGRQAAL------- 73 (198)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCS-CSEEEECCHHHHTTBCCCSCHHHHHHHHH-------
T ss_pred eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCC-ccceeccccccccCCCCCCChHHHHHHHH-------
Confidence 5788995 9999999999998853 4555555544443211 111111111 1 11221111111
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
.+.+.+.+.+++.|.+|.++|..... -.-++..+.+.+++.+.
T Consensus 74 -------------------------e~~~~I~~~l~~~d~vfi~AGlGGGT-----GtgaapviA~~ake~g~ 116 (198)
T d1ofua1 74 -------------------------EDRERISEVLEGADMVFITTGMGGGT-----GTGAAPIIAEVAKEMGI 116 (198)
T ss_dssp -------------------------HTHHHHHHHHTTCSEEEEEEETTSSH-----HHHHHHHHHHHHHHTTC
T ss_pred -------------------------HHHHHHHHHhCCCCeEEEEecCCCCc-----cccHHHHHHHHHHHcCC
Confidence 24467788888899999988876532 23445667888888774
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.62 E-value=0.2 Score=33.20 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=27.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~ 35 (189)
++|+|+|| |.+|-..+..+++.|. .|+++.|++
T Consensus 46 ~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 46 GAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp SEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 57999996 9999999999999986 477777764
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=90.61 E-value=0.2 Score=33.32 Aligned_cols=36 Identities=28% Similarity=0.333 Sum_probs=23.8
Q ss_pred ceEEEEcCCChhhHH-HHHHHHHc-CCcEEEEecCCCCC
Q psy3626 2 KKIAIFGATGMTGLC-SLEAALKQ-GLEVCTLLRDPQRL 38 (189)
Q Consensus 2 ~~i~ItGatG~iG~~-l~~~L~~~-g~~v~~~~r~~~~~ 38 (189)
+|+.|+|. |.+|+. .+..|.+. +.++.+++++++..
T Consensus 2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~ 39 (167)
T d1xeaa1 2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVL 39 (167)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHH
T ss_pred eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHH
Confidence 68999995 899976 45555444 55666666655433
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=90.33 E-value=0.15 Score=38.59 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=26.0
Q ss_pred ceEEEEcC------CChhh---HHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGA------TGMTG---LCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGa------tG~iG---~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
|||++++. +|++| ..|++.|.++||+|+++.....
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~ 44 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHG 44 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEECTT
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecCCC
Confidence 57888764 46666 5568889999999999875433
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=90.20 E-value=0.15 Score=38.12 Aligned_cols=29 Identities=21% Similarity=0.204 Sum_probs=27.0
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEec
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLR 33 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r 33 (189)
|+|.| +|+-|..++.+|.++|++|.++-+
T Consensus 5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa 33 (367)
T d1n4wa1 5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM 33 (367)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence 78999 599999999999999999999976
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.97 E-value=0.24 Score=34.44 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=28.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
|||+++| ++..|..+++.|++.|++|.++...++
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~ 34 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPD 34 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCC
Confidence 5799998 689999999999999999987765443
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=89.89 E-value=0.18 Score=36.37 Aligned_cols=31 Identities=23% Similarity=0.404 Sum_probs=28.4
Q ss_pred EEEEcCCChhhHHHHHHHHHc-CCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQ-GLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~~ 35 (189)
|+|.|| |..|...+.+|.++ |++|.++.+.+
T Consensus 36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence 899997 99999999999875 99999999875
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=89.81 E-value=0.5 Score=31.75 Aligned_cols=112 Identities=17% Similarity=0.228 Sum_probs=56.9
Q ss_pred Cc--eEEEEcCCChhhHHH-HHHHHHcC--CcEEEE-ecCCCCCCcccC-CceeEEeccccChhHHHHhhhc--Ccceee
Q psy3626 1 MK--KIAIFGATGMTGLCS-LEAALKQG--LEVCTL-LRDPQRLPSEYH-SKVEIIQGDVLKLADVKKAIEG--KDGLEV 71 (189)
Q Consensus 1 m~--~i~ItGatG~iG~~l-~~~L~~~g--~~v~~~-~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~--~~~~~~ 71 (189)
|+ |+.|.| +|.+|+.+ +..+.+.+ .++.++ +++++....... -+...+ .++++++++. .|.+++
T Consensus 1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~------~~~~~ell~~~~id~v~I 73 (181)
T d1zh8a1 1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAV------FDSYEELLESGLVDAVDL 73 (181)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEE------ESCHHHHHHSSCCSEEEE
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccce------eeeeeccccccccceeec
Confidence 66 789999 59999874 55565533 466654 444433322110 011111 1234444543 454544
Q ss_pred ecccCCCCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCccE
Q psy3626 72 CTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNVSV 146 (189)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 146 (189)
+++. -...+.+..+++.--.|+. +.|...+..-.+.+++.+++.+..-
T Consensus 74 ~tp~--------------------~~h~~~~~~al~~gk~V~~-------EKPl~~~~~e~~~l~~~~~~~~~~~ 121 (181)
T d1zh8a1 74 TLPV--------------------ELNLPFIEKALRKGVHVIC-------EKPISTDVETGKKVVELSEKSEKTV 121 (181)
T ss_dssp CCCG--------------------GGHHHHHHHHHHTTCEEEE-------ESSSSSSHHHHHHHHHHHHHCSSCE
T ss_pred cccc--------------------cccccccccccccchhhhc-------CCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 4431 1122334444443222322 1334457788888999999987543
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.76 E-value=0.48 Score=31.86 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=25.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEE-ecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTL-LRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~-~r~~~ 36 (189)
+|+.|.| .|.+|+..++.|... +.+++++ +++++
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~ 37 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLE 37 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHH
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCcc
Confidence 5899999 599999999888765 6677755 45443
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=89.46 E-value=0.27 Score=32.78 Aligned_cols=35 Identities=26% Similarity=0.189 Sum_probs=22.8
Q ss_pred ceEEEEcCCChhhHHHHHHHH-Hc-----CCcEEEEecCCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAAL-KQ-----GLEVCTLLRDPQR 37 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~-~~-----g~~v~~~~r~~~~ 37 (189)
|||.|.|| |.+|...+-..+ .. ..++..++.++++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k 41 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEK 41 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHH
Confidence 58999997 778876664432 21 3467777766543
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=89.39 E-value=0.2 Score=36.49 Aligned_cols=31 Identities=23% Similarity=0.508 Sum_probs=28.6
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|+|+ |..|...+..|.++|.+|+++.+.+
T Consensus 19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence 899996 9999999999999999999998764
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=89.20 E-value=0.23 Score=35.22 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=30.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
.|+|.|| |..|...+..|.++|.+|.++.+.+.
T Consensus 6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 3899996 99999999999999999999998764
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=89.18 E-value=0.24 Score=34.11 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=27.7
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++|+|| |+.|...+.++.+.|.+|.++.+.
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 789996 999999999999999999999875
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=88.89 E-value=0.18 Score=33.80 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=26.5
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC-cEEEEecCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL-EVCTLLRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~-~v~~~~r~~~~~ 38 (189)
+++|.|+ |.+|...+..+...|. .|++.++++++.
T Consensus 35 ~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~ 70 (172)
T d1h2ba2 35 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL 70 (172)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH
T ss_pred EEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH
Confidence 6889885 9999998888877775 667677765444
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=88.84 E-value=0.23 Score=36.48 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=28.8
Q ss_pred EEEEcCCChhhHHHHHHHHH-----cCCcEEEEecCCCCC
Q psy3626 4 IAIFGATGMTGLCSLEAALK-----QGLEVCTLLRDPQRL 38 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~-----~g~~v~~~~r~~~~~ 38 (189)
|+|.|| |..|..++..|.+ +|++|+++.|.+...
T Consensus 10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~ 48 (360)
T d1pn0a1 10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV 48 (360)
T ss_dssp EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC
T ss_pred EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCCC
Confidence 899997 9999999999963 599999999876443
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.74 E-value=0.15 Score=34.77 Aligned_cols=65 Identities=31% Similarity=0.356 Sum_probs=45.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
|+|.|+| -|..|.+=+..|...|.+|++-.|..+.--+.. ..|=.+..++.++.+.+|++.++++
T Consensus 17 k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A-------~~~Gf~v~~~~eA~~~aDiim~L~P 81 (182)
T d1np3a2 17 KKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKA-------EAHGLKVADVKTAVAAADVVMILTP 81 (182)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHH-------HHTTCEEECHHHHHHTCSEEEECSC
T ss_pred CEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHH-------hhhccccccHHHHhhhcCeeeeecc
Confidence 6899999 799999999999999999999888754321110 1122223456666777776665554
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=88.13 E-value=0.32 Score=34.87 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=29.3
Q ss_pred ceEEEEcCCChhhHHH-----HHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCS-----LEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l-----~~~L~~~g~~v~~~~r~~~ 36 (189)
++|+|+.|-|++|+.. +..|.++|++|.+++-++.
T Consensus 20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 4788888899999955 5777788999999999875
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.95 E-value=0.28 Score=33.31 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=29.1
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|+|.|| |..|...+..|.+.|.++.++.+..
T Consensus 6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~ 38 (192)
T d1vdca1 6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM 38 (192)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence 47999996 9999999999999999999997654
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=87.81 E-value=0.49 Score=32.72 Aligned_cols=35 Identities=29% Similarity=0.247 Sum_probs=27.6
Q ss_pred Cce-EEEEcCCChhhHH-----HHHHHHHcCCcEEEEecCC
Q psy3626 1 MKK-IAIFGATGMTGLC-----SLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 1 m~~-i~ItGatG~iG~~-----l~~~L~~~g~~v~~~~r~~ 35 (189)
|-| |.|+|+.|++|+. ++..|.++|.+|.+++-+.
T Consensus 1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~ 41 (237)
T d1g3qa_ 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 554 8899999999984 5566677899999998553
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=87.79 E-value=0.26 Score=36.58 Aligned_cols=29 Identities=21% Similarity=0.311 Sum_probs=26.7
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEec
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLR 33 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r 33 (189)
++|.| +|.-|..++.+|.+.|++|.++-+
T Consensus 7 viIVG-sG~aG~v~A~~La~~G~kVlvLEa 35 (379)
T d2f5va1 7 VVIVG-SGPIGCTYARELVGAGYKVAMFDI 35 (379)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEC-cCHHHHHHHHHHhhCCCeEEEEec
Confidence 78999 599999999999999999999965
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=87.76 E-value=0.29 Score=32.63 Aligned_cols=36 Identities=22% Similarity=0.481 Sum_probs=28.1
Q ss_pred eEEEEcCCChhhHHHHHHHHHcC-CcEEEEecCCCCCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQG-LEVCTLLRDPQRLP 39 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g-~~v~~~~r~~~~~~ 39 (189)
+|+|.|+ |.+|...+..+...+ .+|++.++++++++
T Consensus 31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~ 67 (175)
T d1cdoa2 31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67 (175)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHH
Confidence 6899996 778888888887775 47888888876654
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.71 E-value=0.3 Score=29.99 Aligned_cols=34 Identities=3% Similarity=-0.148 Sum_probs=27.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
|+|+|.|+ |.-|..++..|.+..-+++...|++.
T Consensus 33 K~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 33 ESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp CCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 68999995 99999999999888777666666544
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=87.56 E-value=0.28 Score=36.73 Aligned_cols=29 Identities=14% Similarity=0.225 Sum_probs=26.6
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEec
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLR 33 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r 33 (189)
++|.| +|+-|..++.+|.++|++|.++-+
T Consensus 10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEa 38 (370)
T d3coxa1 10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEM 38 (370)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCeEEEEeC
Confidence 78999 599999999999999999999975
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=87.53 E-value=0.2 Score=34.75 Aligned_cols=33 Identities=30% Similarity=0.347 Sum_probs=28.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC-------CcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG-------LEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g-------~~v~~~~r~~ 35 (189)
.+|+|.|+ |.-|-..+.+|.++| ++|+++.+.+
T Consensus 3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~ 42 (239)
T d1lqta2 3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 42 (239)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence 48999995 999999999999987 4799998865
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=87.38 E-value=0.35 Score=33.13 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=28.2
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|+|| |..|...+..+.+.|.+|.++.+.+
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 789996 9999999999999999999998764
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=87.36 E-value=1.4 Score=30.30 Aligned_cols=42 Identities=14% Similarity=0.269 Sum_probs=28.2
Q ss_pred CHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 98 KLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 98 ~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
+.+.+.+.+++.|.+|.++|..... -.-++..+.+.+++.+.
T Consensus 75 ~~~~I~~~l~~~d~vfi~AGlGGgT-----GtGaaPviA~iake~g~ 116 (198)
T d1rq2a1 75 AKDEIEELLRGADMVFVTAGEGGGT-----GTGGAPVVASIARKLGA 116 (198)
T ss_dssp THHHHHHHHTTCSEEEEEEETTSSH-----HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCEEEEEEecCCCC-----CcchHHHHHHHHHHcCC
Confidence 3466778888888888888866532 23345667777777764
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=87.29 E-value=0.7 Score=31.75 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=22.5
Q ss_pred EEEEcCCChhhHHHHH----HHHHc-----CCcEEEEecCCCC
Q psy3626 4 IAIFGATGMTGLCSLE----AALKQ-----GLEVCTLLRDPQR 37 (189)
Q Consensus 4 i~ItGatG~iG~~l~~----~L~~~-----g~~v~~~~r~~~~ 37 (189)
++|+||||.+.+.-+- +|... ...|+++.|++-.
T Consensus 8 lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~ 50 (195)
T d1h9aa1 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALN 50 (195)
T ss_dssp EEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCC
T ss_pred EEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCc
Confidence 5589999999884331 22222 3678999997543
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=87.09 E-value=0.32 Score=35.54 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=23.2
Q ss_pred ceEEEEcC-C-Chh--hHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGA-T-GMT--GLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGa-t-G~i--G~~l~~~L~~~g~~v~~~~r~ 34 (189)
|||+|++| | |.+ +.+++++|.++|++|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 67888774 2 333 345778888889999887643
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.05 E-value=0.38 Score=33.28 Aligned_cols=32 Identities=16% Similarity=0.325 Sum_probs=26.3
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCC--cEEEEecCC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGL--EVCTLLRDP 35 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~--~v~~~~r~~ 35 (189)
.++|.|| |++|-.++..|.+.++ +|+++++.+
T Consensus 6 ~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~ 39 (213)
T d1m6ia1 6 PFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP 39 (213)
T ss_dssp EEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 5789996 9999999999988865 588887654
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.87 E-value=0.47 Score=36.04 Aligned_cols=52 Identities=21% Similarity=0.369 Sum_probs=37.6
Q ss_pred EEEEcCCChhhHHHHHHHHH------cCCcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhh
Q psy3626 4 IAIFGATGMTGLCSLEAALK------QGLEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAI 63 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~------~g~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 63 (189)
|+|.|| |-.|...+..|.+ +|++|.++.|....-.+ ...+.+..+..++..+
T Consensus 35 ViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~pG~k-------~~~Ggvl~~~~l~~l~ 92 (380)
T d2gmha1 35 VVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH-------TLSGACLDPRAFEELF 92 (380)
T ss_dssp EEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT-------CCCCCEECTHHHHHHC
T ss_pred EEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCCCCCC-------ccccccccHHHHHHHc
Confidence 899997 9999999999987 79999999987543222 2334455555555554
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=86.69 E-value=0.4 Score=31.86 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=27.6
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|.|| |..|-..+..+.+.|.+|.++.++.
T Consensus 4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~~ 34 (184)
T d1fl2a1 4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGERF 34 (184)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEECSST
T ss_pred EEEECc-CHHHHHHHHHHHHcCCeEEEEEEec
Confidence 789996 9999999999989999999998753
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=86.66 E-value=1.4 Score=30.99 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=27.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-CCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-GLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g~~v~~~~r~ 34 (189)
++++|-| .|.+|+++++.|.++ |.+|+.++-+
T Consensus 32 ~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~ 64 (234)
T d1b26a1 32 ATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS 64 (234)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred CEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence 5788888 699999999999765 9999887644
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=86.43 E-value=0.36 Score=35.39 Aligned_cols=31 Identities=32% Similarity=0.561 Sum_probs=28.6
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|.|+ |..|...+..|.++|.+|+++.+.+
T Consensus 26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~ 56 (322)
T d1d4ca2 26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP 56 (322)
T ss_dssp EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899995 9999999999999999999998865
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.37 E-value=1.8 Score=28.52 Aligned_cols=106 Identities=12% Similarity=0.115 Sum_probs=54.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-C-CcEEEEecCCCCCCcccCCceeEEeccccChhHHHHhhhc--CcceeeecccCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-G-LEVCTLLRDPQRLPSEYHSKVEIIQGDVLKLADVKKAIEG--KDGLEVCTLLRD 77 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~ 77 (189)
++|+|.| .|.+|+..++.|... + ..+.+.+.......... ..... .+++++++. .|.++.+++.
T Consensus 8 ~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~e~l~~~~iD~V~I~tp~-- 75 (172)
T d1lc0a1 8 FGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSL-DEVRQ--------ISLEDALRSQEIDVAYICSES-- 75 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEE-TTEEB--------CCHHHHHHCSSEEEEEECSCG--
T ss_pred cEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHHHHh-hccCc--------CCHHHHHhCCCcchhhhcccc--
Confidence 3799999 599999888877653 2 22333333222111100 11111 124445543 4555544431
Q ss_pred CCCCCccccCceeEEeccccCHHHHHHHhcCCCEEEEeeccCCCCCCcceehhhHHHHHHHHHHCCc
Q psy3626 78 PQRLPSEYHSKVEIIQGDVLKLADVKKAIEGKDGVVVALGTRNDLSPTTVMSEGMKNIVTAMKEYNV 144 (189)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 144 (189)
-...+.+.++++.--.|+. +.|...+..-.+.+++.+++.|.
T Consensus 76 ------------------~~H~~~~~~al~~gk~V~~-------EKP~a~~~~e~~~l~~~a~~~~~ 117 (172)
T d1lc0a1 76 ------------------SSHEDYIRQFLQAGKHVLV-------EYPMTLSFAAAQELWELAAQKGR 117 (172)
T ss_dssp ------------------GGHHHHHHHHHHTTCEEEE-------ESCSCSCHHHHHHHHHHHHHTTC
T ss_pred ------------------cccccccccccccchhhhc-------CCCccccHHHHHHHHHHHHHcCC
Confidence 1122334444544323332 13334578888999999999875
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=86.35 E-value=0.56 Score=28.08 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=25.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEe
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLL 32 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~ 32 (189)
|||+|.| +|.=--+++..|.+...++++.-
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~p 30 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYP 30 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEec
Confidence 6899999 59889999999988888888764
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=86.34 E-value=0.43 Score=34.06 Aligned_cols=32 Identities=28% Similarity=0.224 Sum_probs=28.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++++|-| -|.+|+++++.|.+.|.+|++++..
T Consensus 32 ~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 32 KTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence 5889998 5999999999999999999888754
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.22 E-value=0.5 Score=32.50 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=28.4
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|+|| |..|...+.++.+.|.+|.++.+.+
T Consensus 8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 899996 9999999999999999999998754
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=86.18 E-value=0.45 Score=34.86 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=28.0
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|.|+ |..|...+..+.++|.+|+++.+.+
T Consensus 8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~ 38 (336)
T d2bs2a2 8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP 38 (336)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence 899995 9999999999999999999998754
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=85.91 E-value=0.38 Score=32.37 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=29.0
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|+|.|| |..|-..+..+.+.|.+|+++.|.+
T Consensus 6 ~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~ 38 (190)
T d1trba1 6 SKLLILGS-GPAGYTAAVYAARANLQPVLITGME 38 (190)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence 46999997 9999999999999999999997754
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=85.52 E-value=0.59 Score=34.33 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=28.9
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++++|-| -|.+|+++++.|.+.|.+|++++-+.
T Consensus 37 ktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~~ 69 (293)
T d1hwxa1 37 KTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGESD 69 (293)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEccc
Confidence 4799999 59999999999999999999887643
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=85.14 E-value=0.59 Score=33.08 Aligned_cols=34 Identities=9% Similarity=0.082 Sum_probs=29.5
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~~ 36 (189)
++++|-| -|.+|+++++.|.+.|.+|++.+.++.
T Consensus 40 ~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~ 73 (230)
T d1leha1 40 LAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKA 73 (230)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHH
Confidence 5789999 599999999999999999998876543
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=84.95 E-value=0.74 Score=31.68 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=27.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|||+++| ++..+..+++.|++.|+++.++...+
T Consensus 4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~ 36 (206)
T d1fmta2 4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQP 36 (206)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 6899998 68899999999999999987766444
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=84.33 E-value=0.63 Score=32.44 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=23.3
Q ss_pred eEEEEcCCChhhH-HHHHHHHHc-CCcEEEE-ecCCCCC
Q psy3626 3 KIAIFGATGMTGL-CSLEAALKQ-GLEVCTL-LRDPQRL 38 (189)
Q Consensus 3 ~i~ItGatG~iG~-~l~~~L~~~-g~~v~~~-~r~~~~~ 38 (189)
+|.|+| .|.+|+ +++..+... +.+++.+ +|++++.
T Consensus 35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a 72 (221)
T d1h6da1 35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKA 72 (221)
T ss_dssp EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHH
T ss_pred EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHH
Confidence 799999 599997 566665554 6777755 5554433
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=84.09 E-value=0.51 Score=33.95 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=28.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++++|-| -|.+|+++++.|.+.|.+|++++-.
T Consensus 37 ~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~ 68 (255)
T d1bgva1 37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP 68 (255)
T ss_dssp CEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence 5889999 5999999999999999999888653
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.94 E-value=0.53 Score=34.45 Aligned_cols=31 Identities=32% Similarity=0.471 Sum_probs=28.4
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
|+|.|+ |..|-..+..+.++|.+|+++.+.+
T Consensus 22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~ 52 (317)
T d1qo8a2 22 VLVVGA-GSAGFNASLAAKKAGANVILVDKAP 52 (317)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899995 9999999999999999999998764
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=83.65 E-value=0.48 Score=34.95 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=23.1
Q ss_pred CceEEEEcCC-Chh--hHHHHHHHHHcCCcEEEEec
Q psy3626 1 MKKIAIFGAT-GMT--GLCSLEAALKQGLEVCTLLR 33 (189)
Q Consensus 1 m~~i~ItGat-G~i--G~~l~~~L~~~g~~v~~~~r 33 (189)
|+-++.+||| |.+ --.|++.|.++||+|+.++.
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~ 36 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP 36 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5444446666 444 34688999999999998874
|
| >d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=83.18 E-value=0.76 Score=32.87 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=28.1
Q ss_pred CceEEEEcCCChhhHH-----HHHHHHHcCCcEEEEecCCC
Q psy3626 1 MKKIAIFGATGMTGLC-----SLEAALKQGLEVCTLLRDPQ 36 (189)
Q Consensus 1 m~~i~ItGatG~iG~~-----l~~~L~~~g~~v~~~~r~~~ 36 (189)
|++++++-|-|++|+. ++..|.++|++|.+++-++.
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~ 47 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5676666678999995 56677788999999987753
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.71 E-value=0.88 Score=30.99 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=27.2
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++|+|| |..|...+..+.+.|.+|.++.+.
T Consensus 6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGG-GSGGLASARRAAELGARAAVVESH 35 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 688996 999999999999999999999764
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=82.18 E-value=0.76 Score=31.48 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=28.0
Q ss_pred eEEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
.++|+|| |..|...+..+.+.|.+|.++.+.
T Consensus 7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 4899995 999999999999999999999764
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=82.13 E-value=0.69 Score=34.60 Aligned_cols=30 Identities=30% Similarity=0.390 Sum_probs=26.6
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRD 34 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~ 34 (189)
++|.|+ |.-|..++.+|.+.|.+|.++-+-
T Consensus 5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG 34 (360)
T d1kdga1 5 YIIVGA-GPGGIIAADRLSEAGKKVLLLERG 34 (360)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHhhCCCeEEEEEcc
Confidence 688895 999999999999999999999654
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=82.02 E-value=2.2 Score=29.03 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=20.4
Q ss_pred ceEEEEcCCChhhHHHHHHHHHcC
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQG 25 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~g 25 (189)
+||.|=| =|.||+.+.+.+++++
T Consensus 3 ikigING-FGRIGR~vlR~~~~~~ 25 (190)
T d1k3ta1 3 IKVGING-FGRIGRMVFQALCEDG 25 (190)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTT
T ss_pred eEEEEEC-CChHHHHHHHHHHHcC
Confidence 5899999 5999999999998764
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=81.99 E-value=0.9 Score=30.34 Aligned_cols=20 Identities=20% Similarity=0.209 Sum_probs=15.1
Q ss_pred HHHHHhcCCCEEEEeeccCC
Q psy3626 101 DVKKAIEGKDGVVVALGTRN 120 (189)
Q Consensus 101 ~~~~~~~~~d~vv~~~~~~~ 120 (189)
+..+++.++|+||.++|...
T Consensus 70 d~~eal~~AD~Vvitag~~~ 89 (167)
T d1u8xx1 70 DPEEAFTDVDFVMAHIRVGK 89 (167)
T ss_dssp CHHHHHSSCSEEEECCCTTH
T ss_pred ChhhccCCCCEEEECCCcCC
Confidence 34677888999999988643
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=81.74 E-value=0.14 Score=38.73 Aligned_cols=67 Identities=25% Similarity=0.305 Sum_probs=46.8
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-C-CcEEEEecCCCCCCccc-----CCceeEEeccccChhHHHHhhhcCcceeeecc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-G-LEVCTLLRDPQRLPSEY-----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTL 74 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g-~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 74 (189)
+++.|+| +|..+..-++.+... + .+|.+.+|+++...+.. ..++.+. --++++.+++++|+++.++.
T Consensus 129 ~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~-----~~~s~~eav~~ADIi~t~Ta 202 (340)
T d1x7da_ 129 RKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIR-----RASSVAEAVKGVDIITTVTA 202 (340)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEE-----ECSSHHHHHTTCSEEEECCC
T ss_pred ceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCce-----ecCCHHHHHhcCCceeeccc
Confidence 4789999 699999888877654 4 58999999876554321 1233332 23567788999998887664
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=81.73 E-value=0.29 Score=36.43 Aligned_cols=69 Identities=17% Similarity=0.094 Sum_probs=46.3
Q ss_pred ceEEEEcCCChhhHHHHHHHHHc-C-CcEEEEecCCCCCCccc----CCceeEEeccccChhHHHHhhhcCcceeeeccc
Q psy3626 2 KKIAIFGATGMTGLCSLEAALKQ-G-LEVCTLLRDPQRLPSEY----HSKVEIIQGDVLKLADVKKAIEGKDGLEVCTLL 75 (189)
Q Consensus 2 ~~i~ItGatG~iG~~l~~~L~~~-g-~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 75 (189)
+++.|+| +|..++.-++.|... . .+|.+.+|++++..... ...+... .+..+++.++|+|+.++..
T Consensus 126 ~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~-------~~~~~a~~~aDiV~taT~s 197 (320)
T d1omoa_ 126 SVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-------VQPAEEASRCDVLVTTTPS 197 (320)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-------ECCHHHHTSSSEEEECCCC
T ss_pred cEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccc-------cchhhhhccccEEEEeccC
Confidence 4688998 699999999988764 3 58999999876554321 1111111 1223557889999888876
Q ss_pred CCC
Q psy3626 76 RDP 78 (189)
Q Consensus 76 ~~~ 78 (189)
..|
T Consensus 198 ~~P 200 (320)
T d1omoa_ 198 RKP 200 (320)
T ss_dssp SSC
T ss_pred ccc
Confidence 655
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=81.68 E-value=1 Score=30.97 Aligned_cols=31 Identities=29% Similarity=0.457 Sum_probs=28.1
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|+|| |..|...+..|.+.|.+|.++.+.+
T Consensus 9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence 789996 9999999999999999999998764
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=81.46 E-value=0.64 Score=34.20 Aligned_cols=32 Identities=13% Similarity=0.051 Sum_probs=22.7
Q ss_pred ceEEEEc-CC-Chh--hHHHHHHHHHcCCcEEEEec
Q psy3626 2 KKIAIFG-AT-GMT--GLCSLEAALKQGLEVCTLLR 33 (189)
Q Consensus 2 ~~i~ItG-at-G~i--G~~l~~~L~~~g~~v~~~~r 33 (189)
|||+|++ || |.+ .-.|++.|.++||+|+.++.
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~ 36 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP 36 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4566664 44 333 44688999999999998873
|
| >d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Mitochondrial NAD(P)-dependent malic enzyme species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.07 E-value=2.4 Score=30.92 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=23.9
Q ss_pred eEEEEcCCChhhHHHHHHHHHc----C-------CcEEEEecC
Q psy3626 3 KIAIFGATGMTGLCSLEAALKQ----G-------LEVCTLLRD 34 (189)
Q Consensus 3 ~i~ItGatG~iG~~l~~~L~~~----g-------~~v~~~~r~ 34 (189)
||+|.|+ |--|-.+++.|... | .+++.++++
T Consensus 27 kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~ 68 (294)
T d1pj3a1 27 KILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKY 68 (294)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETT
T ss_pred EEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCC
Confidence 7899996 99999888887544 3 258888875
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.00 E-value=0.82 Score=33.45 Aligned_cols=29 Identities=34% Similarity=0.379 Sum_probs=25.4
Q ss_pred CCChhhHHHHHHHHHcCCcEEEEecCCCC
Q psy3626 9 ATGMTGLCSLEAALKQGLEVCTLLRDPQR 37 (189)
Q Consensus 9 atG~iG~~l~~~L~~~g~~v~~~~r~~~~ 37 (189)
.||..|.++++.|+.+|+.|+++.+..+-
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~~s~ 72 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRARSA 72 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 47899999999999999999999877443
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=80.68 E-value=1.3 Score=31.04 Aligned_cols=70 Identities=20% Similarity=0.170 Sum_probs=42.8
Q ss_pred CceEEEEcCCChhhHHHHHHHHHcC------CcEEEEecCCCCCCcc-cCCceeEEeccccChhHHHHhhhcCcceeeec
Q psy3626 1 MKKIAIFGATGMTGLCSLEAALKQG------LEVCTLLRDPQRLPSE-YHSKVEIIQGDVLKLADVKKAIEGKDGLEVCT 73 (189)
Q Consensus 1 m~~i~ItGatG~iG~~l~~~L~~~g------~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 73 (189)
||+|.|+| -|..|.+=+..|...| .+|++-.|..++--+. ...+.+.... ...++.++.+.+|++.+++
T Consensus 44 ~KkIaViG-YGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~---~v~~v~EAv~~ADiVmiLl 119 (226)
T d1qmga2 44 IKQIGVIG-WGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENG---TLGDMWETISGSDLVLLLI 119 (226)
T ss_dssp CSEEEEEC-CSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGT---CEEEHHHHHHTCSEEEECS
T ss_pred CCEEEEEE-eccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCC---cccCHHHHHhhCCEEEEec
Confidence 68999999 7999999999999854 5687777765433211 1111110000 0123455667777766665
Q ss_pred c
Q psy3626 74 L 74 (189)
Q Consensus 74 ~ 74 (189)
+
T Consensus 120 P 120 (226)
T d1qmga2 120 S 120 (226)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=80.32 E-value=1.2 Score=30.15 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=27.7
Q ss_pred EEEEcCCChhhHHHHHHHHHcCCcEEEEecCC
Q psy3626 4 IAIFGATGMTGLCSLEAALKQGLEVCTLLRDP 35 (189)
Q Consensus 4 i~ItGatG~iG~~l~~~L~~~g~~v~~~~r~~ 35 (189)
++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus 6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~~ 36 (223)
T d1ebda1 6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN 36 (223)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence 789995 9999999999999999999997753
|