Psyllid ID: psy370

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
Protein Sequence
MPLMKPQMQSEIIPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQNQLFM
Secondary Structure (PSIPRED)
ccccccHHccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccEccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHccccccccEcccccccccccHHHHHcccccccccEEcc
Coil and Loop (DISEMBL)
mplmkpqmqseiipgsytIFVAsqcpvckkiYTDQQLFQNHLethdnemdyscehcdmqfncksdmrkHVHSHLSMEERGFVCEIcghvvdempvatqsskypgqqnqlfm
Flexible Loop (DISEMBL)
mplmkpqmqseiipGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVatqsskypgqqnqlfm
Low Complexity Region (SEG)
MPLMKPQMQSEIIPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQNQLFM
Disordered region (IsUnstruct)
***********IIPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEM******************
Disordered Region (DISOPRED)
****************YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDE*********YPGQQNQLFM
Disordered Region (DISEMBL)
*********SEIIPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQNQLFM
Disordered Region (DISPRO)
*************P*SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQS************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPLMKPQMQSEIIPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQNQLFM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	111	2.2.26 [Sep-21-2011]
Q9QY31	287	Zinc finger protein SNAI3	yes	N/A	0.603	0.233	0.318	7e-08
P07247	502	Protein krueppel OS=Droso	no	N/A	0.549	0.121	0.380	1e-07
Q02085	264	Zinc finger protein SNAI1	no	N/A	0.603	0.253	0.304	4e-07
P25932	470	Protein escargot OS=Droso	no	N/A	0.684	0.161	0.294	6e-07
O95863	264	Zinc finger protein SNAI1	no	N/A	0.603	0.253	0.304	7e-07
Q86UQ0	364	Zinc finger protein 589 O	yes	N/A	0.549	0.167	0.349	7e-07
P19382	259	Protein snail homolog Sna	N/A	N/A	0.621	0.266	0.295	8e-07
Q9NW07	568	Zinc finger protein 358 O	no	N/A	0.684	0.133	0.307	1e-06
Q3KNW1	292	Zinc finger protein SNAI3	no	N/A	0.603	0.229	0.304	1e-06
P08044	390	Protein snail OS=Drosophi	no	N/A	0.675	0.192	0.272	1e-06

>sp|Q9QY31|SNAI3_MOUSE Zinc finger protein SNAI3 OS=Mus musculus GN=Snai3 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C VC K ++   L Q H+ TH  E  Y+C HC   F  +S++R H+ +H+  ++  + C 
Sbjct: 206 CKVCGKAFSRPWLLQGHIRTHTGEKPYTCSHCSRAFADRSNLRAHLQTHVGTKK--YRCA 263

Query: 85  ICGHVVDEM 93
           +C      M
Sbjct: 264 VCPKAFSRM 272

Seems to inhibit myoblast differentiation. Transcriptional repressor of E-box-dependent transactivation of downstream myogenic bHLHs genes. Binds preferentially to the canonical E-box sequences 5'-CAGGTG-3' and 5'-CACCTG-3'.
Mus musculus (taxid: 10090)

>sp|P07247|KRUP_DROME Protein krueppel OS=Drosophila melanogaster GN=Kr PE=1 SV=2

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           +CP C K +T     + H+  H  E  Y C HCD QF   +++R+H+  H    ER + C
Sbjct: 251 ECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTG--ERPYTC 308

Query: 84  EIC 86
           EIC
Sbjct: 309 EIC 311

Krueppel is a gap class segmentation protein. It is involved in the segmentation of the embryo and in the differentiation of the Malpighian tubules.

Drosophila melanogaster (taxid: 7227)

>sp|Q02085|SNAI1_MOUSE Zinc finger protein SNAI1 OS=Mus musculus GN=Snai1 PE=1 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C  C K ++   L Q H+ TH  E  +SC HC+  F  +S++R H+ +H  ++   + C+
Sbjct: 182 CTTCGKAFSRPWLLQGHVRTHTGEKPFSCSHCNRAFADRSNLRAHLQTHSDVKR--YQCQ 239

Query: 85  ICGHVVDEM 93
            C      M
Sbjct: 240 ACARTFSRM 248

Binds to 3 E-boxes of the E-cadherin gene promoter and represses its transcription (By similarity). Involved in the epithelial to mesenchymal transition (EMT) and formation and maintenance of embryonic mesoderm.

Mus musculus (taxid: 10090)

>sp|P25932|ESCA_DROME Protein escargot OS=Drosophila melanogaster GN=esg PE=1 SV=2

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           +C +C K ++   L Q H+ TH  E  +SC+HC   F  +S++R H+ +H  +++  + C
Sbjct: 371 KCNLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCHRAFADRSNLRAHLQTHSDIKK--YSC 428

Query: 84  EICGHVVDEMPVATQSSK 101
             C      M + T+ S+
Sbjct: 429 TSCSKTFSRMSLLTKHSE 446

Transcription factor that can both stimulate and repress transcription. Binds to the consensus DNA sequence 5'-A/GCAGGTG-3'. Regulates cell motility and adhesion during tracheal morphogenesis by stimulating transcription of the DE-cadherin gene shg at branch tips, thereby promoting tracheal tube fusion. Maintains diploidy in imaginal cells by inhibiting the transcription of genes required for endoreplication. Required for development of the genital disk and acts as an intrinsic determinant of wing cell fate. The somatic protein is required for maintenance of male germ cells. Acts with other members of the snail protein family to control embryonic central nervous system development.

Drosophila melanogaster (taxid: 7227)

>sp|O95863|SNAI1_HUMAN Zinc finger protein SNAI1 OS=Homo sapiens GN=SNAI1 PE=1 SV=2

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C  C K ++   L Q H+ TH  E  +SC HC   F  +S++R H+ +H  +++  + C+
Sbjct: 182 CGTCGKAFSRPWLLQGHVRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKK--YQCQ 239

Query: 85  ICGHVVDEM 93
            C      M
Sbjct: 240 ACARTFSRM 248

Involved in the epithelial to mesenchymal transition (EMT) and formation and maintenance of embryonic mesoderm (By similarity). Binds to 3 E-boxes of the E-cadherin gene promoter and represses its transcription.

Homo sapiens (taxid: 9606)

>sp|Q86UQ0|ZN589_HUMAN Zinc finger protein 589 OS=Homo sapiens GN=ZNF589 PE=1 SV=1

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C  C + +  + + +NHL TH  E  Y C HC   F+CK  + +H  +H    E+ F+C 
Sbjct: 278 CGECGRGFIVESVLRNHLSTHSGEKPYVCSHCGRGFSCKPYLIRHQRTH--TREKSFMCT 335

Query: 85  ICG 87
           +CG
Sbjct: 336 VCG 338

May play a role in hematopoietic stem/progenitor cell differentiation. May play a role as a DNA binding-dependent transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|P19382|SNAI1_XENLA Protein snail homolog Sna OS=Xenopus laevis GN=snai1 PE=1 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C +C K ++   L Q H+ TH  E  +SC HC+  F  +S++R H+ +H  +++  + C+
Sbjct: 178 CKICGKAFSRPWLLQGHIRTHTGEKPFSCTHCNRAFADRSNLRAHLQTHSDVKK--YQCK 235

Query: 85  ICGHVVDEMPV 95
            C      M +
Sbjct: 236 SCSRTFSRMSL 246

Transcriptional repressor. Acts upstream of snai2/slug, zic5 and other neural crest markers in the specification of the neural crest and neural crest migration. Involved in embryonic mesoderm formation.

Xenopus laevis (taxid: 8355)

>sp|Q9NW07|ZN358_HUMAN Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 PE=1 SV=2

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           +CP C K +      Q+HL  H  E  Y+C HC   F   S + +H+H H    ER + C
Sbjct: 320 RCPHCGKAFGQSSNLQHHLRIHTGERPYACPHCSKAFGQSSALLQHLHVHSG--ERPYRC 377

Query: 84  EICGHVVDEMPVATQSSK 101
           ++CG    +    T+  +
Sbjct: 378 QLCGKAFGQASSLTKHKR 395

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q3KNW1|SNAI3_HUMAN Zinc finger protein SNAI3 OS=Homo sapiens GN=SNAI3 PE=2 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C +C K ++   L Q H+ TH  E  Y+C HC   F  +S++R H+ +H   + + + C 
Sbjct: 211 CKICGKAFSRPWLLQGHVRTHTGEKPYACSHCSRAFADRSNLRAHLQTH--SDAKKYRCR 268

Query: 85  ICGHVVDEM 93
            C      M
Sbjct: 269 RCTKTFSRM 277

Seems to inhibit myoblast differentiation. Transcriptional repressor of E-box-dependent transactivation of downstream myogenic bHLHs genes. Binds preferentially to the canonical E-box sequences 5'-CAGGTG-3' and 5'-CACCTG-3'.

Homo sapiens (taxid: 9606)

>sp|P08044|SNAI_DROME Protein snail OS=Drosophila melanogaster GN=sna PE=2 SV=2

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           +CP+C K ++   L Q H+ TH  E  + C  C   F  +S++R H  +H+ +++  + C
Sbjct: 307 KCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRSNLRAHQQTHVDVKK--YAC 364

Query: 84  EICGHVVDEMPVATQSS 100
           ++C      M +  + S
Sbjct: 365 QVCHKSFSRMSLLNKHS 381

Essential for the correct specification of ventral-dorsal patterns.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
339250914	230	zinc finger protein [Trichinella spirali	0.576	0.278	0.378	3e-07
291406663	256	PREDICTED: snail 1 homolog [Oryctolagus	0.603	0.261	0.333	4e-07
195156375	738	GL25625 [Drosophila persimilis] gi|19411	0.558	0.084	0.406	5e-07
198471843	783	GA10328 [Drosophila pseudoobscura pseudo	0.558	0.079	0.406	5e-07
213511618	258	snail homolog Sna [Salmo salar] gi|20915	0.603	0.259	0.318	9e-07
145199453	344	scratch1 [Capitella teleta]	0.558	0.180	0.390	1e-06
405958057	371	Zinc finger protein 91 [Crassostrea giga	0.549	0.164	0.412	2e-06
443693844	319	hypothetical protein CAPTEDRAFT_19364 [C	0.558	0.194	0.390	2e-06
328715843	600	PREDICTED: zinc finger protein 714-like	0.738	0.136	0.347	2e-06
195161476	558	GL26594 [Drosophila persimilis] gi|19410	0.612	0.121	0.314	2e-06

>gi|339250914|ref|XP_003374442.1| zinc finger protein [Trichinella spiralis] gi|316969247|gb|EFV53375.1| zinc finger protein [Trichinella spiralis]

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 22  ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGF 81
            S+CP+C K +T   L Q HL TH  E  + C  C   F  KS++R H+ +H  ++   F
Sbjct: 132 GSKCPICGKTFTRHWLIQGHLRTHTGEKPFKCTICSKAFADKSNLRAHIQTHSGLKP--F 189

Query: 82  VCEICG 87
            C  CG
Sbjct: 190 ACRRCG 195

Source: Trichinella spiralis

Species: Trichinella spiralis

Genus: Trichinella

Family: Trichinellidae

Order: Trichocephalida

Class: Enoplea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|291406663|ref|XP_002719736.1| PREDICTED: snail 1 homolog [Oryctolagus cuniculus]

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C  C K ++   L Q H+ TH  E  +SC HC   F  +S++R H+ +HL++++  + CE
Sbjct: 173 CGTCGKAFSRPWLLQGHVRTHTGEKPFSCSHCSRAFADRSNLRAHLQTHLAVKK--YPCE 230

Query: 85  ICGHVVDEM 93
            C      M
Sbjct: 231 RCSRTFSRM 239

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195156375|ref|XP_002019076.1| GL25625 [Drosophila persimilis] gi|194115229|gb|EDW37272.1| GL25625 [Drosophila persimilis]

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           QCP C KI+T Q   + H+  H  EM Y C++C+ +F     +R H+  H    E+ F C
Sbjct: 600 QCPTCLKIFTTQGGMRIHMSIHTGEMPYKCQYCEKRFRTPGQVRVHLRRHTG--EKPFQC 657

Query: 84  EICG 87
           EICG
Sbjct: 658 EICG 661

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198471843|ref|XP_001355743.2| GA10328 [Drosophila pseudoobscura pseudoobscura] gi|198139490|gb|EAL32802.2| GA10328 [Drosophila pseudoobscura pseudoobscura]

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           QCP C KI+T Q   + H+  H  EM Y C++C+ +F     +R H+  H    E+ F C
Sbjct: 600 QCPTCLKIFTTQGGMRIHMSIHTGEMPYKCQYCEKRFRTPGQVRVHLRRHTG--EKPFQC 657

Query: 84  EICG 87
           EICG
Sbjct: 658 EICG 661

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|213511618|ref|NP_001133951.1| snail homolog Sna [Salmo salar] gi|209155942|gb|ACI34203.1| snail homolog Sna [Salmo salar]

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           CP C K ++   L + H+ TH  E  +SC+HC+  F  +S++R H+ +H   E + + C 
Sbjct: 175 CPTCGKAFSRPWLLRGHIRTHTGERPFSCQHCNRAFADRSNLRAHLQTH--AEVKKYQCG 232

Query: 85  ICGHVVDEM 93
           +C      M
Sbjct: 233 VCSRTFSRM 241

Source: Salmo salar

Species: Salmo salar

Genus: Salmo

Family: Salmonidae

Order: Salmoniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|145199453|gb|ABP35756.1| scratch1 [Capitella teleta]

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           QCP C K ++   L Q H+ TH  E  +SC+ C   F  KS++R HV +H +  E+ + C
Sbjct: 252 QCPYCGKRFSRPWLLQGHIRTHTGEKPFSCQQCGKAFADKSNLRAHVQTHST--EKPYSC 309

Query: 84  EICG 87
             CG
Sbjct: 310 GRCG 313

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|405958057|gb|EKC24221.1| Zinc finger protein 91 [Crassostrea gigas]

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 35/63 (55%)

Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C VC   + D    + H++ H +E  +SCE C   F    DMRKH   HL+ EER + CE
Sbjct: 69  CKVCGMAFRDPSTMRKHVKRHSSERPFSCETCGKMFASTYDMRKHARIHLNDEERPYKCE 128

Query: 85  ICG 87
           +CG
Sbjct: 129 VCG 131

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|443693844|gb|ELT95117.1| hypothetical protein CAPTEDRAFT_19364 [Capitella teleta]

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           QCP C K ++   L Q H+ TH  E  +SC+ C   F  KS++R HV +H +  E+ + C
Sbjct: 227 QCPYCGKRFSRPWLLQGHIRTHTGEKPFSCQQCGKAFADKSNLRAHVQTHST--EKPYSC 284

Query: 84  EICG 87
             CG
Sbjct: 285 GRCG 288

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|328715843|ref|XP_003245747.1| PREDICTED: zinc finger protein 714-like [Acyrthosiphon pisum]

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 3   LMKPQMQSEIIPGSYTIFVAS----QCPVCKKIYTDQQLFQNHLETH--DNEMD--YSCE 54
           ++K   +  ++P S+T  +AS    QC VC KIY  +  F+NHL +H  D   D  + C 
Sbjct: 17  VVKTAAEPAVLPSSHTATMASNKFLQCNVCHKIYRRKNAFKNHLRSHVKDTITDGPFQCN 76

Query: 55  HCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC 86
           +C M F   S +++H  SH    E+ + CE C
Sbjct: 77  YCSMSFTVPSQLKRHYRSHTG--EKPYKCEYC 106

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195161476|ref|XP_002021594.1| GL26594 [Drosophila persimilis] gi|194103394|gb|EDW25437.1| GL26594 [Drosophila persimilis]

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           +CP+C K ++   L Q H+ TH  E  +SC+HC+  F  +S++R H+ +H  +++  + C
Sbjct: 423 KCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQTHSDVKK--YSC 480

Query: 84  EICGHVVDEM 93
             C      M
Sbjct: 481 PTCTKSFSRM 490

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
ZFIN|ZDB-GENE-091204-357	285	si:dkey-17e16.13 "si:dkey-17e1	0.540	0.210	0.370	2.4e-09
MGI|MGI:1289293	556	Zkscan6 "zinc finger with KRAB	0.459	0.091	0.392	2.9e-09
ZFIN|ZDB-GENE-030131-423	394	wu:fb30e12 "wu:fb30e12" [Danio	0.756	0.213	0.321	3.1e-09
UNIPROTKB|P17022	549	ZNF18 "Zinc finger protein 18"	0.459	0.092	0.372	4.5e-09
RGD|1305130	556	Zfp18 "zinc finger protein 18"	0.459	0.091	0.372	4.7e-09
ZFIN|ZDB-GENE-110407-3	499	si:ch211-191d2.2 "si:ch211-191	0.558	0.124	0.390	4.7e-09
ZFIN|ZDB-GENE-050208-707	346	si:dkey-15h8.16 "si:dkey-15h8.	0.558	0.179	0.406	5e-09
FB|FBgn0001325	502	Kr "Kruppel" [Drosophila melan	0.729	0.161	0.321	6.1e-09
UNIPROTKB|Q6ZTB9	187	ZNF833P "Putative zinc finger	0.558	0.331	0.343	7.6e-09
UNIPROTKB|F1MJI9	513	ZNF18 "Uncharacterized protein	0.504	0.109	0.357	7.9e-09

ZFIN|ZDB-GENE-091204-357 si:dkey-17e16.13 "si:dkey-17e16.13" [Danio rerio (taxid:7955)]

 Score = 141 (54.7 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query:    25 CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
             C VC+K +T  ++ + HL+ H     YSCEHC   FN   D+++HV +H  +  R + C 
Sbjct:   139 CQVCQKTFTTARMLKRHLKCHSETKKYSCEHCGKGFNDTFDLKRHVRTHTGV--RPYKCT 196

Query:    85 IC 86
             +C
Sbjct:   197 MC 198

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

MGI|MGI:1289293 Zkscan6 "zinc finger with KRAB and SCAN domains 6" [Mus musculus (taxid:10090)]

 Score = 124 (48.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
 Identities = 20/51 (39%), Positives = 27/51 (52%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL 74
             +CP+C+K +  +  F  H   H  E  Y C HC  QF+  S + KH  SHL
Sbjct:   500 KCPLCEKSFIQRSNFNRHQRVHTGEKPYKCTHCGKQFSWSSSLDKHQRSHL 550

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IBA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IBA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-423 wu:fb30e12 "wu:fb30e12" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 28/87 (32%), Positives = 44/87 (50%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
             +C  C + Y D    +NH+  H  E  Y CEHC   FN  S+MR H+  H +  E+  VC
Sbjct:   220 RCTECGRSYKDLTGLKNHMRVHSGEKQYVCEHCGKGFNSVSNMRYHLRVHTN--EKPHVC 277

Query:    84 EICGHVVDEMPVATQSSK-YPGQQNQL 109
              +CG     +   T   K + G+++++
Sbjct:   278 SVCGRGFSLLVSCTLHEKIHTGEKDKV 304

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|P17022 ZNF18 "Zinc finger protein 18" [Homo sapiens (taxid:9606)]

 Score = 122 (48.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL 74
             +CP+C+K +  +  F  H   H  E  Y C HC   F+  S + KH  SHL
Sbjct:   493 KCPICEKSFIQRSNFNRHQRVHTGEKPYKCSHCGKSFSWSSSLDKHQRSHL 543

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IBA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IBA

RGD|1305130 Zfp18 "zinc finger protein 18" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL 74
             +CP+C+K +  +  F  H   H  E  Y C HC  +F+  S + KH  SHL
Sbjct:   500 KCPICEKSFIQRSNFNRHQRVHTGEKPYKCTHCGKRFSWSSSLDKHQRSHL 550

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

ZFIN|ZDB-GENE-110407-3 si:ch211-191d2.2 "si:ch211-191d2.2" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 25/64 (39%), Positives = 34/64 (53%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
             QC VC K + ++Q  + H   H  E  Y C HC+  FN K+ M+ H+  H +  ER F C
Sbjct:   279 QCDVCNKSFCNKQTLEVHKRIHTGERPYKCPHCNKSFNYKAAMKNHIRIHTN--ERPFQC 336

Query:    84 EICG 87
               CG
Sbjct:   337 SECG 340

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-050208-707 si:dkey-15h8.16 "si:dkey-15h8.16" [Danio rerio (taxid:7955)]

 Score = 140 (54.3 bits), Expect = 5.0e-09, P = 5.0e-09
 Identities = 26/64 (40%), Positives = 35/64 (54%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
             +C  CKK +T     +NHL  H NE  YSC  C  +F  +S+++KH   H  + E  FVC
Sbjct:   233 KCDQCKKTFTRPSELKNHLRIHSNERPYSCSECGKRFILQSNLKKHQKIHTGVRE--FVC 290

Query:    84 EICG 87
               CG
Sbjct:   291 FDCG 294

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

FB|FBgn0001325 Kr "Kruppel" [Drosophila melanogaster (taxid:7227)]

 Score = 142 (55.0 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 27/84 (32%), Positives = 42/84 (50%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
             +CP C K +T     + H+  H  E  Y C HCD QF   +++R+H+  H    ER + C
Sbjct:   251 ECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTG--ERPYTC 308

Query:    84 EIC-GHVVDEMPVATQSSKYPGQQ 106
             EIC G   D   + +    + G++
Sbjct:   309 EICDGKFSDSNQLKSHMLVHNGEK 332

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA;TAS

GO:0048749 "compound eye development" evidence=IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA;NAS

GO:0007443 "Malpighian tubule morphogenesis" evidence=NAS;TAS

GO:0003682 "chromatin binding" evidence=NAS

GO:0007354 "zygotic determination of anterior/posterior axis, embryo" evidence=NAS;TAS

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0007400 "neuroblast fate determination" evidence=IEP;IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0040034 "regulation of development, heterochronic" evidence=NAS;TAS

GO:0007517 "muscle organ development" evidence=TAS

GO:0007419 "ventral cord development" evidence=NAS

GO:0007402 "ganglion mother cell fate determination" evidence=TAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035290 "trunk segmentation" evidence=TAS

GO:0061332 "Malpighian tubule bud morphogenesis" evidence=IGI

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0006342 "chromatin silencing" evidence=IMP

GO:0035220 "wing disc development" evidence=IGI

GO:0035206 "regulation of hemocyte proliferation" evidence=IMP

UNIPROTKB|Q6ZTB9 ZNF833P "Putative zinc finger protein 833" [Homo sapiens (taxid:9606)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 22/64 (34%), Positives = 32/64 (50%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
             +C  C K + +  L+  H  TH  E  Y C  C   F+C S +RKH   H    E+ ++C
Sbjct:    11 KCKFCGKAFDNLHLYLTHERTHTGEKPYECNKCGKAFSCSSSIRKHARIHTG--EKPYIC 68

Query:    84 EICG 87
             + CG
Sbjct:    69 KQCG 72

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MJI9 ZNF18 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 118 (46.6 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
 Identities = 20/56 (35%), Positives = 27/56 (48%)

Query:    24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEER 79
             +CPVC+K +  +  F  H   H  E  Y C  C   F+  S + KH  SHL  + R
Sbjct:   457 KCPVCEKSFIQRSNFNRHQRVHTGEKPYKCTRCGKSFSWSSSLDKHQRSHLGKKPR 512

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	111
KOG2462|consensus	279		99.87
KOG2462|consensus	279		99.85
KOG3623|consensus	1007		99.68
KOG3576|consensus	267		99.61
KOG3623|consensus	1007		99.51
KOG3576|consensus	267		99.44
KOG1074|consensus	958		99.33
PHA00733	128	hypothetical protein	99.21
KOG3608|consensus	467		99.2
KOG3608|consensus	467		99.18
PHA02768	55	hypothetical protein; Provisional	99.08
PHA02768	55	hypothetical protein; Provisional	98.99
KOG1074|consensus	958		98.96
PLN03086	567	PRLI-interacting factor K; Provisional	98.91
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.86
PLN03086	567	PRLI-interacting factor K; Provisional	98.82
PHA00733	128	hypothetical protein	98.81
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.68
PHA00616	44	hypothetical protein	98.62
PHA00732	79	hypothetical protein	98.61
KOG3993|consensus	500		98.35
PHA00732	79	hypothetical protein	98.31
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.21
PHA00616	44	hypothetical protein	98.19
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.17
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.15
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.12
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.05
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.95
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.91
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.89
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.78
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.72
KOG3993|consensus	500		97.36
smart00355	26	ZnF_C2H2 zinc finger.	97.34
smart00355	26	ZnF_C2H2 zinc finger.	97.19
PRK04860	160	hypothetical protein; Provisional	97.07
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.01
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.9
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.83
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.71
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.68
PRK04860	160	hypothetical protein; Provisional	96.62
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.3
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.28
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.15
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.17
COG4049	65	Uncharacterized protein containing archaeal-type C	93.99
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.63
COG5048	467	FOG: Zn-finger [General function prediction only]	93.54
KOG2186|consensus	276		93.28
KOG2231|consensus	669		93.17
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.13
COG4049	65	Uncharacterized protein containing archaeal-type C	91.81
COG5048	467	FOG: Zn-finger [General function prediction only]	91.78
COG5189	423	SFP1 Putative transcriptional repressor regulating	91.24
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	91.18
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.68
PRK06266	178	transcription initiation factor E subunit alpha; V	90.0
COG1592	166	Rubrerythrin [Energy production and conversion]	89.31
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	88.54
KOG1146|consensus	1406		88.19
KOG1146|consensus	1406		87.76
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.64
KOG2893|consensus	341		87.39
smart00531	147	TFIIE Transcription initiation factor IIE.	87.06
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	86.38
KOG2893|consensus	341		86.11
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	85.25
KOG2593|consensus	436		84.63
KOG2186|consensus	276		84.62
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	84.12
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	84.03
PF05290	140	Baculo_IE-1: Baculovirus immediate-early protein (	83.42
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	83.24
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	82.81
KOG4167|consensus	907		81.96
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	81.92
PF13878	41	zf-C2H2_3: zinc-finger of acetyl-transferase ESCO	81.67
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	80.06
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	80.05
PF11931	196	DUF3449: Domain of unknown function (DUF3449); Int	80.05

>KOG2462|consensus

Probab=99.87  E-value=5.7e-23  Score=130.04  Aligned_cols=85  Identities=21%  Similarity=0.461  Sum_probs=74.7

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhh
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQS   99 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h   99 (111)
                      .+.+.|++|++.|.....|..|+++|+  .+++|.+||+.|.+++-|+.|+|.|+  |||||.|+.|++.|..++.|+-|
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHT--GEKPF~C~hC~kAFADRSNLRAH  234 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHT--GEKPFSCPHCGKAFADRSNLRAH  234 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccccccc--CCCCccCCcccchhcchHHHHHH
Confidence            667889999999999989999999887  68899999999999999999999998  89999999999999999999999


Q ss_pred             ccccCcccc
Q psy370          100 SKYPGQQNQ  108 (111)
Q Consensus       100 ~~~~~~~~~  108 (111)
                      +.+|-+..+
T Consensus       235 mQTHS~~K~  243 (279)
T KOG2462|consen  235 MQTHSDVKK  243 (279)
T ss_pred             HHhhcCCcc
Confidence            988876654

>KOG2462|consensus

Probab=99.85  E-value=3.2e-22  Score=126.70  Aligned_cols=82  Identities=28%  Similarity=0.619  Sum_probs=77.4

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHH
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVAT   97 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~   97 (111)
                      |..-++.|.+||+.|...=.|+.|+|+|+||+||.|..|+++|...++|.-||+.|.  +.|+|.|..|+|+|...+.|.
T Consensus       183 TH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS--~~K~~qC~~C~KsFsl~SyLn  260 (279)
T KOG2462|consen  183 THTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS--DVKKHQCPRCGKSFALKSYLN  260 (279)
T ss_pred             ccCCCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhc--CCccccCcchhhHHHHHHHHH
Confidence            334589999999999999999999999999999999999999999999999999998  889999999999999999999


Q ss_pred             hhcc
Q psy370           98 QSSK  101 (111)
Q Consensus        98 ~h~~  101 (111)
                      +|.-
T Consensus       261 KH~E  264 (279)
T KOG2462|consen  261 KHSE  264 (279)
T ss_pred             Hhhh
Confidence            9974

>KOG3623|consensus

Probab=99.68  E-value=2.4e-17  Score=115.92  Aligned_cols=85  Identities=22%  Similarity=0.364  Sum_probs=80.1

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHH
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVAT   97 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~   97 (111)
                      +.+..|-|..|+++|-..+.|.+|.--|+|.+||.|.+|.++|..+..|..|+|.|.  |||||.|..|+|+|+.+....
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHS--GEKPfQCdKClKRFSHSGSYS  967 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHS--GEKPFQCDKCLKRFSHSGSYS  967 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhcc--CCCcchhhhhhhhcccccchH
Confidence            556789999999999999999999999999999999999999999999999999998  999999999999999999999


Q ss_pred             hhccccC
Q psy370           98 QSSKYPG  104 (111)
Q Consensus        98 ~h~~~~~  104 (111)
                      +||.-+.
T Consensus       968 QHMNHRY  974 (1007)
T KOG3623|consen  968 QHMNHRY  974 (1007)
T ss_pred             hhhccch
Confidence            9996443

>KOG3576|consensus

Probab=99.61  E-value=7.1e-17  Score=98.86  Aligned_cols=86  Identities=22%  Similarity=0.419  Sum_probs=79.3

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHH
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVAT   97 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~   97 (111)
                      .+...|.|.+|++.|.-...|..|++.|...+.+.|..||+.|...-.|..|+|.|+  |-+||+|..|++.|+.+-.|.
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rtht--gvrpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHT--GVRPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhcccc--CccccchhhhhHHHHhhccHH
Confidence            346679999999999999999999999999999999999999999999999999998  899999999999999999999


Q ss_pred             hhccccCc
Q psy370           98 QSSKYPGQ  105 (111)
Q Consensus        98 ~h~~~~~~  105 (111)
                      .|.+.-|+
T Consensus       191 shl~kvhg  198 (267)
T KOG3576|consen  191 SHLKKVHG  198 (267)
T ss_pred             HHHHHHcC
Confidence            99875554

>KOG3623|consensus

Probab=99.51  E-value=2.3e-15  Score=106.11  Aligned_cols=83  Identities=17%  Similarity=0.403  Sum_probs=75.0

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHHcCC-------------CCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLETHDN-------------EMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~-------------~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      -.+..|.|..|..+|.....|.+|+.+|..             .+-|+|..||++|..+..|..|+|+|.  |||||+|+
T Consensus       236 kne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHS--GEKPfeCp  313 (1007)
T KOG3623|consen  236 KNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHS--GEKPFECP  313 (1007)
T ss_pred             hCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeec--CCCCcCCc
Confidence            446678999999999999999999988752             255999999999999999999999998  99999999


Q ss_pred             CCccccccchhHHhhccc
Q psy370           85 ICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        85 ~C~~~~~~~~~l~~h~~~  102 (111)
                      .|+|+|+.+..+.+||..
T Consensus       314 nCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  314 NCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccccccccCCcccccccc
Confidence            999999999999999853

>KOG3576|consensus

Probab=99.44  E-value=2.4e-14  Score=87.90  Aligned_cols=95  Identities=20%  Similarity=0.349  Sum_probs=82.3

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccC---------CCCCceecC
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLS---------MEERGFVCE   84 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~---------~~~~~~~C~   84 (111)
                      .+-|+..+.|-|..||+.|.+.-+|..|.++|+|.+||.|..|+++|...-+|..|++.=++         +.++.|.|+
T Consensus       137 ~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vce  216 (267)
T KOG3576|consen  137 LKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCE  216 (267)
T ss_pred             hhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeec
Confidence            34567788899999999999999999999999999999999999999999999988774322         245779999


Q ss_pred             CCccccccchhHHhhccccCcccc
Q psy370           85 ICGHVVDEMPVATQSSKYPGQQNQ  108 (111)
Q Consensus        85 ~C~~~~~~~~~l~~h~~~~~~~~~  108 (111)
                      .||.+-.....+..|++.+|...-
T Consensus       217 dcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  217 DCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             ccCCCCCChhHHHHHHHhcCCCCH
Confidence            999999999999999999986543

>KOG1074|consensus

Probab=99.33  E-value=5.3e-13  Score=95.43  Aligned_cols=84  Identities=23%  Similarity=0.463  Sum_probs=75.6

Q ss_pred             ccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCC----CceecC---CCccccc
Q psy370           19 IFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEE----RGFVCE---ICGHVVD   91 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~----~~~~C~---~C~~~~~   91 (111)
                      ...+-+|-+|-+.....+.|+.|.++|+|++||+|.+||++|.++.+|..|+..|.  -.    .++.|+   .|.+.|.
T Consensus       602 ~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHk--a~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  602 RTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHK--AKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             cCCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccc--cCccccccccCCchhhhccccc
Confidence            34467899999999999999999999999999999999999999999999999985  22    346799   9999999


Q ss_pred             cchhHHhhccccC
Q psy370           92 EMPVATQSSKYPG  104 (111)
Q Consensus        92 ~~~~l~~h~~~~~  104 (111)
                      +--.|.+|++.|-
T Consensus       680 n~V~lpQhIriH~  692 (958)
T KOG1074|consen  680 NAVTLPQHIRIHL  692 (958)
T ss_pred             ccccccceEEeec
Confidence            9999999999876

>PHA00733 hypothetical protein

Probab=99.21  E-value=1.1e-11  Score=72.30  Aligned_cols=81  Identities=21%  Similarity=0.347  Sum_probs=67.6

Q ss_pred             cCcccCCCcccccCCHHHHHHH--HH---HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccch
Q psy370           20 FVASQCPVCKKIYTDQQLFQNH--LE---THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMP   94 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h--~~---~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~   94 (111)
                      .+++.|.+|...|.....|..+  .+   .+.+.++|.|..|++.|.....|..|++.+    +.+|.|..|++.|....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h----~~~~~C~~CgK~F~~~~  113 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT----EHSKVCPVCGKEFRNTD  113 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC----CcCccCCCCCCccCCHH
Confidence            5678999999999888777655  21   233478999999999999999999999865    35799999999999999


Q ss_pred             hHHhhccccC
Q psy370           95 VATQSSKYPG  104 (111)
Q Consensus        95 ~l~~h~~~~~  104 (111)
                      .|..|+...|
T Consensus       114 sL~~H~~~~h  123 (128)
T PHA00733        114 STLDHVCKKH  123 (128)
T ss_pred             HHHHHHHHhc
Confidence            9999987665

>KOG3608|consensus

Probab=99.20  E-value=7.6e-12  Score=82.53  Aligned_cols=80  Identities=23%  Similarity=0.484  Sum_probs=50.3

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhcc
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSK  101 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~  101 (111)
                      +|.|..|.+.|.++..|..|++.|.  ..|.|+.|+.+....++|.+|++..++ ..+||+|..|.+.|.+-++|.+|.-
T Consensus       237 ~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs-~dkpfKCd~Cd~~c~~esdL~kH~~  313 (467)
T KOG3608|consen  237 SFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHS-KDKPFKCDECDTRCVRESDLAKHVQ  313 (467)
T ss_pred             chHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhc-cCCCccccchhhhhccHHHHHHHHH
Confidence            3444444444444444444444332  346777777777777777777776543 5777888888877777777777776


Q ss_pred             ccC
Q psy370          102 YPG  104 (111)
Q Consensus       102 ~~~  104 (111)
                      +|.
T Consensus       314 ~HS  316 (467)
T KOG3608|consen  314 VHS  316 (467)
T ss_pred             hcc
Confidence            554

>KOG3608|consensus

Probab=99.18  E-value=9.4e-12  Score=82.10  Aligned_cols=92  Identities=18%  Similarity=0.483  Sum_probs=60.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcC--CCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHD--NEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDE   92 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~--~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~   92 (111)
                      .+|+++|..-|+.||..|.++..|..|.+..+  ...+|.|..|-+.|.+...|..|++.|.    .-|+|+.|..+.+.
T Consensus       200 r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv----n~ykCplCdmtc~~  275 (467)
T KOG3608|consen  200 RTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV----NCYKCPLCDMTCSS  275 (467)
T ss_pred             HhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh----hcccccccccCCCC
Confidence            34566666666666666666666665555433  2345666666666666666666666553    35788888888888


Q ss_pred             chhHHhhccccCcccccc
Q psy370           93 MPVATQSSKYPGQQNQLF  110 (111)
Q Consensus        93 ~~~l~~h~~~~~~~~~~~  110 (111)
                      .+.|..|+++.|++.+.|
T Consensus       276 ~ssL~~H~r~rHs~dkpf  293 (467)
T KOG3608|consen  276 ASSLTTHIRYRHSKDKPF  293 (467)
T ss_pred             hHHHHHHHHhhhccCCCc
Confidence            888888998888877655

>PHA02768 hypothetical protein; Provisional

Probab=99.08  E-value=7.4e-11  Score=58.34  Aligned_cols=41  Identities=17%  Similarity=0.348  Sum_probs=21.7

Q ss_pred             ccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchh
Q psy370           51 YSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPV   95 (111)
Q Consensus        51 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~   95 (111)
                      |.|+.||+.|...++|..|++.|+    ++++|..|++.|...+.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~----k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN----TNLKLSNCKRISLRTGE   46 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC----CcccCCcccceecccce
Confidence            455555555555555555555553    35555555555554443

>PHA02768 hypothetical protein; Provisional

Probab=98.99  E-value=3.3e-10  Score=56.06  Aligned_cols=44  Identities=20%  Similarity=0.517  Sum_probs=39.1

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMR   67 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~   67 (111)
                      -|.|++||+.|...+.|..|+++|+  +++.|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3799999999999999999999998  6899999999998766553

>KOG1074|consensus

Probab=98.96  E-value=3.4e-10  Score=81.49  Aligned_cols=53  Identities=25%  Similarity=0.676  Sum_probs=49.9

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ...|.+||+.|...++|++|+++|+++++|.|.+|+++|....+|..||..|.
T Consensus       879 ~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~  931 (958)
T KOG1074|consen  879 AHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHM  931 (958)
T ss_pred             hhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhcccc
Confidence            47899999999999999999999999999999999999999999999999886

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.91  E-value=5.2e-09  Score=73.72  Aligned_cols=84  Identities=18%  Similarity=0.366  Sum_probs=62.6

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcccccc
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDE   92 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~   92 (111)
                      .-.....++.+.|+.|++.|. ...+..|+..+.  .++.|. |+..+ ....|..|+..|.  .++++.|..|++.|..
T Consensus       444 v~~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thC--p~Kpi~C~fC~~~v~~  516 (567)
T PLN03086        444 VLRVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTC--PLRLITCRFCGDMVQA  516 (567)
T ss_pred             eeeccccccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccC--CCCceeCCCCCCcccc
Confidence            334556677788999998885 567888888863  778888 88644 5688888888887  6888889989888842


Q ss_pred             ----------chhHHhhcccc
Q psy370           93 ----------MPVATQSSKYP  103 (111)
Q Consensus        93 ----------~~~l~~h~~~~  103 (111)
                                ...|..|...+
T Consensus       517 g~~~~d~~d~~s~Lt~HE~~C  537 (567)
T PLN03086        517 GGSAMDVRDRLRGMSEHESIC  537 (567)
T ss_pred             CccccchhhhhhhHHHHHHhc
Confidence                      23577787664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.86  E-value=2.5e-09  Score=45.50  Aligned_cols=25  Identities=28%  Similarity=0.836  Sum_probs=17.9

Q ss_pred             HHHHHHHhccCCCCCceecCCCccccc
Q psy370           65 DMRKHVHSHLSMEERGFVCEICGHVVD   91 (111)
Q Consensus        65 ~l~~h~~~h~~~~~~~~~C~~C~~~~~   91 (111)
                      +|..|++.|+  |++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~--~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHT--GEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHS--SSSSEEESSSSEEES
T ss_pred             CHHHHhhhcC--CCCCCCCCCCcCeeC
Confidence            3567777776  677777777777775

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.82  E-value=9.3e-09  Score=72.49  Aligned_cols=79  Identities=19%  Similarity=0.288  Sum_probs=66.2

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccC----------CHHHHHHHHHhccCCCCCceecCCCcccc
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFN----------CKSDMRKHVHSHLSMEERGFVCEICGHVV   90 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~----------~~~~l~~h~~~h~~~~~~~~~C~~C~~~~   90 (111)
                      +++.|+ ||..+ ....|..|+.+|...+++.|.+|+..+.          ..+.+..|....   |.+++.|..||+.+
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C---G~rt~~C~~Cgk~V  551 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC---GSRTAPCDSCGRSV  551 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc---CCcceEccccCCee
Confidence            678999 99765 6688999999999999999999999884          235788998875   79999999999999


Q ss_pred             ccchhHHhhccccCc
Q psy370           91 DEMPVATQSSKYPGQ  105 (111)
Q Consensus        91 ~~~~~l~~h~~~~~~  105 (111)
                      ..++ +..|+...|.
T Consensus       552 rlrd-m~~H~~~~h~  565 (567)
T PLN03086        552 MLKE-MDIHQIAVHQ  565 (567)
T ss_pred             eehh-HHHHHHHhhc
Confidence            8885 7778766554

>PHA00733 hypothetical protein

Probab=98.81  E-value=1.5e-08  Score=59.24  Aligned_cols=56  Identities=18%  Similarity=0.396  Sum_probs=49.4

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +.++++|.|+.|++.|.....|..|++.+  ..++.|..|++.|.....|..|+...+
T Consensus        68 ~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         68 SKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             cCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            34478999999999999999999999976  357999999999999999999988654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.68  E-value=1.6e-08  Score=42.96  Aligned_cols=25  Identities=32%  Similarity=0.739  Sum_probs=22.6

Q ss_pred             HHHHHHHHcCCCCCccccccCcccC
Q psy370           37 LFQNHLETHDNEMDYSCEHCDMQFN   61 (111)
Q Consensus        37 ~l~~h~~~h~~~~~~~c~~c~~~f~   61 (111)
                      +|..|+++|+++++|.|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4789999999999999999999885

...

>PHA00616 hypothetical protein

Probab=98.62  E-value=2.5e-08  Score=47.14  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=27.3

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCCCCccccc
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEH   55 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   55 (111)
                      +|+|..||+.|...+.+..|++.|++++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5788888888888888888888888888777653

>PHA00732 hypothetical protein

Probab=98.61  E-value=4.9e-08  Score=52.33  Aligned_cols=45  Identities=20%  Similarity=0.498  Sum_probs=29.3

Q ss_pred             cccCCCcccccCCHHHHHHHHHH-cCCCCCccccccCcccCCHHHHHHHHHh
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLET-HDNEMDYSCEHCDMQFNCKSDMRKHVHS   72 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~h~~~   72 (111)
                      +|.|..|++.|.....|..|++. |.+   +.|..|++.|.   .+..|...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            46677777777777777777763 442   36777777776   35555543

>KOG3993|consensus

Probab=98.35  E-value=6.1e-08  Score=65.64  Aligned_cols=89  Identities=20%  Similarity=0.419  Sum_probs=66.4

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCC------C----------------
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSM------E----------------   77 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~------~----------------   77 (111)
                      ...|.|..|...|-+.-.|-+|.=.-.-...|.|..|++.|.-+.+|..|+|=|.-+      +                
T Consensus       265 iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  265 IGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            335888888888887777777754333445688888888888888888887755210      0                


Q ss_pred             ---------CCceecCCCccccccchhHHhhccccCcccc
Q psy370           78 ---------ERGFVCEICGHVVDEMPVATQSSKYPGQQNQ  108 (111)
Q Consensus        78 ---------~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~  108 (111)
                               +--|.|..|++.|.+...|.+|+-+|+...+
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~  384 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPL  384 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcccc
Confidence                     1138899999999999999999998886654

>PHA00732 hypothetical protein

Probab=98.31  E-value=6.9e-07  Score=47.92  Aligned_cols=52  Identities=15%  Similarity=0.271  Sum_probs=42.9

Q ss_pred             CccccccCcccCCHHHHHHHHHh-ccCCCCCceecCCCccccccchhHHhhccccCccccc
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHS-HLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQNQL  109 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~-h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~  109 (111)
                      +|.|..|++.|....++..|++. |.     ++.|+.|++.|.   .+..|+++..+-..|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-----~~~C~~CgKsF~---~l~~H~~~~~~~~~~   53 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-----LTKCPVCNKSYR---RLNQHFYSQYDIEHL   53 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-----CCccCCCCCEeC---ChhhhhcccCCccce
Confidence            57899999999999999999985 54     358999999998   477888777665554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.21  E-value=2.3e-06  Score=42.65  Aligned_cols=51  Identities=20%  Similarity=0.404  Sum_probs=20.5

Q ss_pred             ccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccC
Q psy370           51 YSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        51 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      |.|++|++. .....|..|....+....+.+.|+.|...+.  ..|..|+..+|
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            344444442 2233444443322111223445555554333  24555554443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.19  E-value=7.7e-07  Score=42.09  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=25.8

Q ss_pred             CccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      +|.|..||..|...+.+..|++.|+  |++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h--g~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH--KQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc--CCCccceeE
Confidence            4678888888888888888888777  677776654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.17  E-value=1.5e-06  Score=35.59  Aligned_cols=23  Identities=26%  Similarity=0.843  Sum_probs=16.3

Q ss_pred             ccCCCcccccCCHHHHHHHHHHc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.15  E-value=5.3e-07  Score=36.97  Aligned_cols=22  Identities=18%  Similarity=0.507  Sum_probs=15.5

Q ss_pred             eecCCCccccccchhHHhhccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5677777777777777777664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.12  E-value=1.7e-06  Score=36.83  Aligned_cols=26  Identities=15%  Similarity=0.461  Sum_probs=20.5

Q ss_pred             ceecCCCccccccchhHHhhccccCc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +|.|..|++.|.+..+|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            47788888888888888888877764

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.05  E-value=1.6e-06  Score=35.61  Aligned_cols=24  Identities=25%  Similarity=0.463  Sum_probs=16.1

Q ss_pred             eecCCCccccccchhHHhhccccC
Q psy370           81 FVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      |.|+.|++.|.+..+|..|++.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777776654

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.95  E-value=3e-05  Score=38.54  Aligned_cols=50  Identities=24%  Similarity=0.535  Sum_probs=38.7

Q ss_pred             cccCCCcccccCCHHHHHHHHHH-cCCC-CCccccccCcccCCHHHHHHHHHhcc
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLET-HDNE-MDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~-h~~~-~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      .|.|+.|++ ..+...|..|... |..+ +.+.|++|...+.  .++..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            589999999 6667889999765 6653 5799999997543  48888887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.91  E-value=3.5e-06  Score=55.61  Aligned_cols=71  Identities=21%  Similarity=0.351  Sum_probs=46.8

Q ss_pred             cCcccCCC--cccccCCHHHHHHHHHH-cCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhH
Q psy370           20 FVASQCPV--CKKIYTDQQLFQNHLET-HDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVA   96 (111)
Q Consensus        20 ~~~~~c~~--C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l   96 (111)
                      ++||+|++  |.+.|++...|+-|+.- |...+...-+--.          .+.-+-.  ..|||.|+.|+|.+.+...|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~----------~~~~F~~--~~KPYrCevC~KRYKNlNGL  414 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPE----------KMNIFSA--KDKPYRCEVCDKRYKNLNGL  414 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCcc----------ccccccc--cCCceeccccchhhccCccc
Confidence            47888876  88888888888877653 3333322221000          0111111  67999999999999999999


Q ss_pred             Hhhccc
Q psy370           97 TQSSKY  102 (111)
Q Consensus        97 ~~h~~~  102 (111)
                      .-|++-
T Consensus       415 KYHr~H  420 (423)
T COG5189         415 KYHRKH  420 (423)
T ss_pred             eecccc
Confidence            988763

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.89  E-value=6e-06  Score=45.78  Aligned_cols=72  Identities=11%  Similarity=0.310  Sum_probs=21.2

Q ss_pred             cCCCcccccCCHHHHHHHHHH-cCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccc
Q psy370           24 QCPVCKKIYTDQQLFQNHLET-HDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        24 ~c~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      +|..|+..|.+...+..|+.. |.-..+     ....+.....+..+.+...   ...+.|..|++.|.+..+|..|++.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~~---~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKKV---KESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             --------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc-----ccccccccccccccccccc---CCCCCCCccCCCCcCHHHHHHHHcC
Confidence            588999999999999999864 432222     1111223333333433322   3368999999999999999999985


Q ss_pred             c
Q psy370          103 P  103 (111)
Q Consensus       103 ~  103 (111)
                      +
T Consensus        73 ~   73 (100)
T PF12756_consen   73 K   73 (100)
T ss_dssp             T
T ss_pred             c
Confidence            4

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.78  E-value=1.4e-05  Score=33.92  Aligned_cols=24  Identities=21%  Similarity=0.581  Sum_probs=15.5

Q ss_pred             cccCCCcccccCCHHHHHHHHHHc
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      +|.|..|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            356666666666666666666554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.72  E-value=3.2e-05  Score=31.52  Aligned_cols=23  Identities=35%  Similarity=0.871  Sum_probs=13.8

Q ss_pred             ccCCCcccccCCHHHHHHHHHHc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      |.|+.|+..|.+...|..|++++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45667777777777777766553

...

>KOG3993|consensus

Probab=97.36  E-value=4.8e-05  Score=52.04  Aligned_cols=56  Identities=14%  Similarity=0.377  Sum_probs=48.7

Q ss_pred             CccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      .|.|+.|...|...-.|.+|+....  .-.-|+|+.|+|+|.-...|.+|++-|-.+.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RI--V~vEYrCPEC~KVFsCPANLASHRRWHKPR~  322 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRI--VHVEYRCPECDKVFSCPANLASHRRWHKPRP  322 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCee--EEeeecCCcccccccCchhhhhhhcccCCch
Confidence            4899999999999999999988665  4456999999999999999999999886543

>smart00355 ZnF_C2H2 zinc finger

Probab=97.34  E-value=0.00028  Score=28.97  Aligned_cols=23  Identities=30%  Similarity=0.895  Sum_probs=14.1

Q ss_pred             ccCCCcccccCCHHHHHHHHHHc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      |.|..|++.|.....+..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35666666666666666666544

>smart00355 ZnF_C2H2 zinc finger

Probab=97.19  E-value=0.00013  Score=30.09  Aligned_cols=23  Identities=17%  Similarity=0.466  Sum_probs=16.1

Q ss_pred             eecCCCccccccchhHHhhcccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45777777777777777777643

>PRK04860 hypothetical protein; Provisional

Probab=97.07  E-value=0.00044  Score=41.98  Aligned_cols=39  Identities=23%  Similarity=0.499  Sum_probs=30.6

Q ss_pred             CccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccch
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMP   94 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~   94 (111)
                      +|.|. |+.   ...++..|.+.+.  ++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~--g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVR--GEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhc--CCccEECCCCCceeEEec
Confidence            57887 876   5667788888887  788899999998887654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.01  E-value=0.00042  Score=28.63  Aligned_cols=22  Identities=23%  Similarity=0.706  Sum_probs=14.2

Q ss_pred             ccCCCcccccCCHHHHHHHHHH
Q psy370           23 SQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      |.|..|+..|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666667666666666553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.90  E-value=0.00046  Score=28.49  Aligned_cols=22  Identities=23%  Similarity=0.490  Sum_probs=14.3

Q ss_pred             eecCCCccccccchhHHhhccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      |.|..|++.|.+...|.+|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566676777666666666653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.83  E-value=0.00065  Score=28.71  Aligned_cols=22  Identities=23%  Similarity=0.427  Sum_probs=18.7

Q ss_pred             eecCCCccccccchhHHhhccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      |.|..|++.|.+...+.+|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788899999998888888875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.71  E-value=0.0024  Score=31.10  Aligned_cols=22  Identities=18%  Similarity=0.549  Sum_probs=7.2

Q ss_pred             CccccccCcccCCHHHHHHHHH
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVH   71 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~   71 (111)
                      |..|++|+..+....+|..|+.
T Consensus        24 PatCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHH
T ss_pred             CCCCCcchhhccchhhHHHHHH
Confidence            3334444444444444444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.68  E-value=0.00056  Score=28.01  Aligned_cols=23  Identities=13%  Similarity=0.222  Sum_probs=11.9

Q ss_pred             eecCCCccccccchhHHhhccccC
Q psy370           81 FVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      |.|..|..... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666665555 555666665543

>PRK04860 hypothetical protein; Provisional

Probab=96.62  E-value=0.0013  Score=39.93  Aligned_cols=38  Identities=24%  Similarity=0.531  Sum_probs=32.4

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCK   63 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~   63 (111)
                      +|.|. |+.   ....+..|.++++++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            69998 987   556688999999999999999999877543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.30  E-value=0.011  Score=28.80  Aligned_cols=33  Identities=18%  Similarity=0.425  Sum_probs=22.1

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHHcCCCCC
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLETHDNEMD   50 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~   50 (111)
                      ..+.|-.|++|+..+....+|..|+..+.+.++
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            446688999999999999999999976555444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.28  E-value=0.0011  Score=28.00  Aligned_cols=21  Identities=19%  Similarity=0.683  Sum_probs=14.7

Q ss_pred             ccCCCcccccCCHHHHHHHHH
Q psy370           23 SQCPVCKKIYTDQQLFQNHLE   43 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~   43 (111)
                      |.|..|++.|.+...+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567777777777777776654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.15  E-value=0.0027  Score=26.39  Aligned_cols=21  Identities=24%  Similarity=0.460  Sum_probs=14.7

Q ss_pred             eecCCCccccccchhHHhhccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      ..|+.||+.| ..+.|..|++.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3678888888 55567777654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.17  E-value=0.015  Score=25.79  Aligned_cols=23  Identities=22%  Similarity=0.462  Sum_probs=18.4

Q ss_pred             ceecCCCccccccchhHHhhccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      +|.|..|+..|.+..++..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47788888888888888888763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.99  E-value=0.017  Score=28.60  Aligned_cols=28  Identities=18%  Similarity=0.203  Sum_probs=21.4

Q ss_pred             CCCceecCCCccccccchhHHhhccccC
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ||.-+.|+.||..|..+.+...|+.-.|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            6677788888888888888888875443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.63  E-value=0.1  Score=28.51  Aligned_cols=23  Identities=22%  Similarity=0.759  Sum_probs=15.3

Q ss_pred             CccccccCcccCCHHHHHHHHHh
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHS   72 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~   72 (111)
                      .+.|..|+..|.....+..|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            66777777777777777777664

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.54  E-value=0.027  Score=38.43  Aligned_cols=55  Identities=18%  Similarity=0.475  Sum_probs=37.4

Q ss_pred             CccccccCcccCCHHHHHHHHH--hccCCCC--CceecC--CCccccccchhHHhhccccCcc
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVH--SHLSMEE--RGFVCE--ICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~--~h~~~~~--~~~~C~--~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      .+.|..|...|.....+..|.+  .|.  ++  +++.|.  .|++.|.+.+.+..|...+...
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHS--GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             CCCCccccCCccccccccccccccccc--cccCCceeeeccCCCccccccccccCCcccccCC
Confidence            4666667777777777777777  565  56  677777  5777777777777776666543

>KOG2186|consensus

Probab=93.28  E-value=0.055  Score=35.13  Aligned_cols=47  Identities=21%  Similarity=0.485  Sum_probs=36.2

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVH   71 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~   71 (111)
                      -|.|..||.+..-+ .+..|+....+ ..|.|..|+..|.. .++..|..
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            37899999988766 46668776666 67899999999988 66666654

>KOG2231|consensus

Probab=93.17  E-value=0.17  Score=37.36  Aligned_cols=85  Identities=11%  Similarity=0.320  Sum_probs=51.6

Q ss_pred             ccCCCcccccC---------------CHHHHHHHHHH-cCCCCCccccc------cCcccCCHHHHHHHHHhccCCCCCc
Q psy370           23 SQCPVCKKIYT---------------DQQLFQNHLET-HDNEMDYSCEH------CDMQFNCKSDMRKHVHSHLSMEERG   80 (111)
Q Consensus        23 ~~c~~C~~~f~---------------~~~~l~~h~~~-h~~~~~~~c~~------c~~~f~~~~~l~~h~~~h~~~~~~~   80 (111)
                      +.|.+|.+.+.               .-..|+.|+.. |....-..|..      +.....+...++.|+..-.. ++..
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~-d~~s  178 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDP-DDES  178 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCC-cccc
Confidence            56777777662               45667888754 43222112221      11233455677777764321 2222


Q ss_pred             ----eecCCCccccccchhHHhhccccCcccc
Q psy370           81 ----FVCEICGHVVDEMPVATQSSKYPGQQNQ  108 (111)
Q Consensus        81 ----~~C~~C~~~~~~~~~l~~h~~~~~~~~~  108 (111)
                          -.|..|...|.....|..|++..|..++
T Consensus       179 ~rGhp~C~~C~~~fld~~el~rH~~~~h~~ch  210 (669)
T KOG2231|consen  179 CRGHPLCKFCHERFLDDDELYRHLRFDHEFCH  210 (669)
T ss_pred             ccCCccchhhhhhhccHHHHHHhhccceehee
Confidence                3588999999999999999998886544

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.13  E-value=0.071  Score=23.53  Aligned_cols=11  Identities=55%  Similarity=1.186  Sum_probs=6.2

Q ss_pred             ccCCCcccccC
Q psy370           23 SQCPVCKKIYT   33 (111)
Q Consensus        23 ~~c~~C~~~f~   33 (111)
                      |.|.+||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            45666665543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.81  E-value=0.11  Score=25.78  Aligned_cols=30  Identities=13%  Similarity=0.330  Sum_probs=24.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHH
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      .+..||..+.|+-||..|....++..|...
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            356788889999999999988888888653

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.78  E-value=0.054  Score=37.01  Aligned_cols=62  Identities=18%  Similarity=0.398  Sum_probs=53.6

Q ss_pred             CcccCCCcccccCCHHHHHHHHH--HcCCC--CCcccc--ccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLE--THDNE--MDYSCE--HCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~--~h~~~--~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      .++.|..|...|.....+..|.+  .|.++  +++.|.  .|+..|.+...+..|...|.  +..++.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT--SISPAKEK  355 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccccc--CCCccccc
Confidence            46889999999999999999999  79999  999999  79999999999999998887  55555543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=91.24  E-value=0.069  Score=35.96  Aligned_cols=22  Identities=27%  Similarity=0.513  Sum_probs=15.8

Q ss_pred             cCcccCCCcccccCCHHHHHHH
Q psy370           20 FVASQCPVCKKIYTDQQLFQNH   41 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h   41 (111)
                      .|||.|++|++.|++...|+-|
T Consensus       396 ~KPYrCevC~KRYKNlNGLKYH  417 (423)
T COG5189         396 DKPYRCEVCDKRYKNLNGLKYH  417 (423)
T ss_pred             CCceeccccchhhccCccceec
Confidence            3778888888887777666555

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=91.18  E-value=0.21  Score=28.44  Aligned_cols=29  Identities=28%  Similarity=0.694  Sum_probs=18.7

Q ss_pred             cCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCH
Q psy370           24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCK   63 (111)
Q Consensus        24 ~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~   63 (111)
                      .|+.||..|-..           +..|.+|+.||..|...
T Consensus        11 ~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            677777777433           22567777777766554

The function of members of this family is unknown.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.68  E-value=0.16  Score=22.58  Aligned_cols=10  Identities=40%  Similarity=0.816  Sum_probs=5.7

Q ss_pred             CceecCCCcc
Q psy370           79 RGFVCEICGH   88 (111)
Q Consensus        79 ~~~~C~~C~~   88 (111)
                      .|..|+.||.
T Consensus        17 ~p~~CP~Cg~   26 (34)
T cd00729          17 APEKCPICGA   26 (34)
T ss_pred             CCCcCcCCCC
Confidence            3456666664

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=90.00  E-value=0.21  Score=30.99  Aligned_cols=31  Identities=32%  Similarity=0.890  Sum_probs=16.7

Q ss_pred             CCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcccc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVV   90 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~   90 (111)
                      .-|.|+.|+..|.....+.           -.|.|+.||...
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~-----------~~F~Cp~Cg~~L  146 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME-----------YGFRCPQCGEML  146 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh-----------cCCcCCCCCCCC
Confidence            4466666665555444331           136666666544

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=89.31  E-value=0.25  Score=30.31  Aligned_cols=25  Identities=36%  Similarity=0.731  Sum_probs=19.1

Q ss_pred             CCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGH   88 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~   88 (111)
                      +.|+|.+||..             +.  |+.|.+|+.||.
T Consensus       133 ~~~vC~vCGy~-------------~~--ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPVCGYT-------------HE--GEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCCCCCc-------------cc--CCCCCcCCCCCC
Confidence            36999999853             22  678899999984

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=88.54  E-value=0.35  Score=29.41  Aligned_cols=36  Identities=28%  Similarity=0.655  Sum_probs=22.2

Q ss_pred             cCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccc
Q psy370           45 HDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVD   91 (111)
Q Consensus        45 h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~   91 (111)
                      ..+..-|.|+.|+..|.....+.           -.|.|+.||....
T Consensus       104 e~~~~~Y~Cp~c~~r~tf~eA~~-----------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       104 ETNNMFFICPNMCVRFTFNEAME-----------LNFTCPRCGAMLD  139 (158)
T ss_pred             ccCCCeEECCCCCcEeeHHHHHH-----------cCCcCCCCCCEee
Confidence            33445677777776666655553           1378888876553

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG1146|consensus

Probab=88.19  E-value=0.16  Score=40.11  Aligned_cols=25  Identities=8%  Similarity=0.175  Sum_probs=21.5

Q ss_pred             CCceecCCCccccccchhHHhhccc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      -++|.|..|...+...-.|..|+..
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHH
Confidence            3688999999999999889988853

>KOG1146|consensus

Probab=87.76  E-value=0.49  Score=37.65  Aligned_cols=83  Identities=20%  Similarity=0.438  Sum_probs=62.4

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHH-cC------------------------CCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLET-HD------------------------NEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~-h~------------------------~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      .+-+.|+.|+..|+..+.|..|+++ |.                        +.++|.|..|...+....+|..|+....
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~~  542 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSDL  542 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHHHh
Confidence            4678999999999999999999987 11                        1357889999999999999998866321


Q ss_pred             CC----------C------------------------------C-CceecCCCccccccchhHHhhccc
Q psy370           75 SM----------E------------------------------E-RGFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        75 ~~----------~------------------------------~-~~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      ..          |                              + ..|.|..|+.-..-...|+-|+..
T Consensus       543 h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmts  611 (1406)
T KOG1146|consen  543 HRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTA  611 (1406)
T ss_pred             hHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhcccccccc
Confidence            10          0                              0 136788898877777778878763

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.64  E-value=0.056  Score=34.45  Aligned_cols=20  Identities=25%  Similarity=0.534  Sum_probs=14.9

Q ss_pred             cCcccCCCcccccCCHHHHH
Q psy370           20 FVASQCPVCKKIYTDQQLFQ   39 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~   39 (111)
                      .+.+.|++|++.|..+....
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs   22 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRS   22 (214)
T ss_pred             CCceECCCCCCeeeeeEEEc
Confidence            46678999999998775443

>KOG2893|consensus

Probab=87.39  E-value=0.26  Score=31.97  Aligned_cols=32  Identities=19%  Similarity=0.664  Sum_probs=23.6

Q ss_pred             cCCCcccccCCHHHHHHHHHHcCCCCCccccccCcc
Q psy370           24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQ   59 (111)
Q Consensus        24 ~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~   59 (111)
                      .|=.|++-|.....|.+|++.    +.|+|.+|-+.
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkk   43 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKK   43 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhh
Confidence            366788888888888887664    67788888654

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.06  E-value=0.48  Score=28.38  Aligned_cols=41  Identities=22%  Similarity=0.615  Sum_probs=25.5

Q ss_pred             CCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcccccc
Q psy370           46 DNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDE   92 (111)
Q Consensus        46 ~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~   92 (111)
                      .+...|.|+.|+..|........   ...   +..|.|+.||.....
T Consensus        95 ~~~~~Y~Cp~C~~~y~~~ea~~~---~d~---~~~f~Cp~Cg~~l~~  135 (147)
T smart00531       95 TNNAYYKCPNCQSKYTFLEANQL---LDM---DGTFTCPRCGEELEE  135 (147)
T ss_pred             cCCcEEECcCCCCEeeHHHHHHh---cCC---CCcEECCCCCCEEEE
Confidence            34567899999987775433321   011   223999999986643

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=86.38  E-value=0.86  Score=22.96  Aligned_cols=10  Identities=30%  Similarity=1.022  Sum_probs=6.8

Q ss_pred             CceecCCCcc
Q psy370           79 RGFVCEICGH   88 (111)
Q Consensus        79 ~~~~C~~C~~   88 (111)
                      .+|.|+.||.
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4677777774

>KOG2893|consensus

Probab=86.11  E-value=0.2  Score=32.49  Aligned_cols=39  Identities=23%  Similarity=0.517  Sum_probs=29.2

Q ss_pred             ccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHH
Q psy370           53 CEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVAT   97 (111)
Q Consensus        53 c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~   97 (111)
                      |=.|.+.|....-|.+|++.      +-|+|..|.+..-+-..|.
T Consensus        13 cwycnrefddekiliqhqka------khfkchichkkl~sgpgls   51 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA------KHFKCHICHKKLFSGPGLS   51 (341)
T ss_pred             eeecccccchhhhhhhhhhh------ccceeeeehhhhccCCCce
Confidence            56689999999999998874      4499999987554443443

>smart00614 ZnF_BED BED zinc finger

Probab=85.25  E-value=0.64  Score=22.40  Aligned_cols=22  Identities=14%  Similarity=0.353  Sum_probs=15.7

Q ss_pred             eecCCCccccccc-----hhHHhhccc
Q psy370           81 FVCEICGHVVDEM-----PVATQSSKY  102 (111)
Q Consensus        81 ~~C~~C~~~~~~~-----~~l~~h~~~  102 (111)
                      -.|..|++.+...     +.|..|++.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~   45 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRR   45 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHh
Confidence            4688888877654     468888873

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>KOG2593|consensus

Probab=84.63  E-value=0.76  Score=32.30  Aligned_cols=38  Identities=29%  Similarity=0.616  Sum_probs=21.9

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCc
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDM   58 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~   58 (111)
                      +...-|.|+.|++.|.....++   ........|.|..|+.
T Consensus       124 t~~~~Y~Cp~C~kkyt~Lea~~---L~~~~~~~F~C~~C~g  161 (436)
T KOG2593|consen  124 TNVAGYVCPNCQKKYTSLEALQ---LLDNETGEFHCENCGG  161 (436)
T ss_pred             cccccccCCccccchhhhHHHH---hhcccCceEEEecCCC
Confidence            4455577777777766554443   2233345677777764

>KOG2186|consensus

Probab=84.62  E-value=0.73  Score=30.15  Aligned_cols=46  Identities=20%  Similarity=0.432  Sum_probs=33.7

Q ss_pred             ccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhcc
Q psy370           51 YSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSK  101 (111)
Q Consensus        51 ~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~  101 (111)
                      |.|.+||....-+..- .|+..-+  + ..|-|..|++.|... +..-|.+
T Consensus         4 FtCnvCgEsvKKp~ve-kH~srCr--n-~~fSCIDC~k~F~~~-sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQVE-KHMSRCR--N-AYFSCIDCGKTFERV-SYKNHTK   49 (276)
T ss_pred             EehhhhhhhccccchH-HHHHhcc--C-CeeEEeecccccccc-hhhhhhh
Confidence            7899999877665444 4776554  3 689999999999884 4666664

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=84.12  E-value=0.92  Score=20.48  Aligned_cols=33  Identities=30%  Similarity=0.705  Sum_probs=16.6

Q ss_pred             cccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccc
Q psy370           52 SCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVD   91 (111)
Q Consensus        52 ~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~   91 (111)
                      .|+.|+..|.-..+-..     .  +.....|..|+..|.
T Consensus         4 ~CP~C~~~f~v~~~~l~-----~--~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDKLP-----A--GGRKVRCPKCGHVFR   36 (37)
T ss_pred             ECCCCCceEEcCHHHcc-----c--CCcEEECCCCCcEee
Confidence            45566655554432211     1  234566777776653

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=84.03  E-value=1.4  Score=22.22  Aligned_cols=11  Identities=27%  Similarity=0.845  Sum_probs=7.0

Q ss_pred             CCceecCCCcc
Q psy370           78 ERGFVCEICGH   88 (111)
Q Consensus        78 ~~~~~C~~C~~   88 (111)
                      ..+|.|+.||.
T Consensus        48 g~~Y~Cp~CGF   58 (61)
T COG2888          48 GNPYRCPKCGF   58 (61)
T ss_pred             CCceECCCcCc
Confidence            34677777764

>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0

Probab=83.42  E-value=0.48  Score=27.93  Aligned_cols=57  Identities=16%  Similarity=0.431  Sum_probs=32.4

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCH--HHHHHHHHhccCCCCCceecCCCccccccchh
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCK--SDMRKHVHSHLSMEERGFVCEICGHVVDEMPV   95 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~--~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~   95 (111)
                      .+.|+|..|.++......|          +|-+|  ||......  ..|+.+-..+       -+|+.|.-+|.+++.
T Consensus        78 ~~lYeCnIC~etS~ee~FL----------KPneC--CgY~iCn~Cya~LWK~~~~y-------pvCPvCkTSFKss~~  136 (140)
T PF05290_consen   78 PKLYECNICKETSAEERFL----------KPNEC--CGYSICNACYANLWKFCNLY-------PVCPVCKTSFKSSSS  136 (140)
T ss_pred             CCceeccCcccccchhhcC----------Ccccc--cchHHHHHHHHHHHHHcccC-------CCCCccccccccccc
Confidence            4678888888776555433          23333  34322222  3444443333       379999999977653

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=83.24  E-value=0.37  Score=30.79  Aligned_cols=28  Identities=14%  Similarity=0.330  Sum_probs=19.0

Q ss_pred             CCceecCCCccccccchhHHhhccccCc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +..|.|..|+|.|.-.....+|+...|.
T Consensus        75 ~~K~~C~lc~KlFkg~eFV~KHI~nKH~  102 (214)
T PF04959_consen   75 EDKWRCPLCGKLFKGPEFVRKHIFNKHP  102 (214)
T ss_dssp             SEEEEE-SSS-EESSHHHHHHHHHHH-H
T ss_pred             CCEECCCCCCcccCChHHHHHHHhhcCH
Confidence            3457888888888888888888876663

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=82.81  E-value=0.76  Score=20.65  Aligned_cols=11  Identities=45%  Similarity=0.924  Sum_probs=6.6

Q ss_pred             ceecCCCcccc
Q psy370           80 GFVCEICGHVV   90 (111)
Q Consensus        80 ~~~C~~C~~~~   90 (111)
                      ...|+.|+..|
T Consensus        25 ~v~C~~C~~~~   35 (38)
T TIGR02098        25 KVRCGKCGHVW   35 (38)
T ss_pred             EEECCCCCCEE
Confidence            35666666655

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG4167|consensus

Probab=81.96  E-value=0.21  Score=37.29  Aligned_cols=27  Identities=30%  Similarity=0.468  Sum_probs=23.8

Q ss_pred             eecCCCccccccchhHHhhccccCccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      |.|..|+++|-....+.-|||+|...+
T Consensus       793 FpCreC~kvF~KiKSrNAHMK~Hr~q~  819 (907)
T KOG4167|consen  793 FPCRECGKVFFKIKSRNAHMKTHRQQE  819 (907)
T ss_pred             eehHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            899999999999999999999987443

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=81.92  E-value=1  Score=20.21  Aligned_cols=32  Identities=25%  Similarity=0.709  Sum_probs=16.2

Q ss_pred             cccccCcccCCHHHHHHHHHhccCCCCCceecCCCcccc
Q psy370           52 SCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVV   90 (111)
Q Consensus        52 ~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~   90 (111)
                      .|+.|...|.-......     .  ......|..|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~ip-----~--~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEKIP-----P--KGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHHCC-----C--CCcEEECCCCCCEe
Confidence            45556555554433221     1  23456677777665

>PF13878 zf-C2H2_3: zinc-finger of acetyl-transferase ESCO

Probab=81.67  E-value=0.65  Score=21.56  Aligned_cols=24  Identities=21%  Similarity=0.379  Sum_probs=16.3

Q ss_pred             eecCCCccccccc--hhHHhhccccC
Q psy370           81 FVCEICGHVVDEM--PVATQSSKYPG  104 (111)
Q Consensus        81 ~~C~~C~~~~~~~--~~l~~h~~~~~  104 (111)
                      -.|..||.++...  .+-..|.++|.
T Consensus        14 ~~C~~CgM~Y~~~~~eD~~~H~~yH~   39 (41)
T PF13878_consen   14 TTCPTCGMLYSPGSPEDEKLHKKYHD   39 (41)
T ss_pred             cCCCCCCCEECCCCHHHHHHHHHHHh
Confidence            4788888877444  45667777663

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=80.06  E-value=1.3  Score=25.93  Aligned_cols=29  Identities=21%  Similarity=0.211  Sum_probs=16.8

Q ss_pred             cCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCH
Q psy370           24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCK   63 (111)
Q Consensus        24 ~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~   63 (111)
                      .|+.||+.|-..           +..|..|+.||..|...
T Consensus        11 ~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        11 ICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             cCCCcCcccccc-----------CCCCccCCCcCCccCcc
Confidence            567777666321           23566777777665444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=80.05  E-value=0.41  Score=29.03  Aligned_cols=12  Identities=25%  Similarity=0.695  Sum_probs=5.9

Q ss_pred             ccccccCcccCC
Q psy370           51 YSCEHCDMQFNC   62 (111)
Q Consensus        51 ~~c~~c~~~f~~   62 (111)
                      +.|+.||.+|..
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            455555554443

>PF11931 DUF3449: Domain of unknown function (DUF3449); InterPro: IPR024598 This presumed domain is functionally uncharacterised

Probab=80.05  E-value=0.55  Score=29.60  Aligned_cols=35  Identities=17%  Similarity=0.385  Sum_probs=0.0

Q ss_pred             CCccCCCCccccCcccCCCccc-ccCCHHHHHHHHH
Q psy370            9 QSEIIPGSYTIFVASQCPVCKK-IYTDQQLFQNHLE   43 (111)
Q Consensus         9 ~~~~~~~~~~~~~~~~c~~C~~-~f~~~~~l~~h~~   43 (111)
                      ++-|..+-|...+.|.|.+||. +|.-...+..|..
T Consensus        88 IPyWLYKLhGL~~ey~CEICGN~~Y~GrkaFekHF~  123 (196)
T PF11931_consen   88 IPYWLYKLHGLGVEYKCEICGNQSYKGRKAFEKHFQ  123 (196)
T ss_dssp             ------------------------------------
T ss_pred             ccHHHHHHhCCCCeeeeEeCCCcceecHHHHHHhcC
Confidence            5678888888888899999987 4545567777754

It has two conserved sequence motifs: PIP and CEICG and contains a zinc-finger of the C2H2-type.; PDB: 4DGW_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	111
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		9e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		9e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-04
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 24  QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           +CP C K ++D++    H  TH  E  Y C  C   F+ ++++R H  +H    E+ + C
Sbjct: 51  KCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG--EKPYAC 108
Query: 84  EICGHVVDEM 93
             CG    ++
Sbjct: 109 PECGKSFSQL 118

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 25 CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
          C +C KI+ D      H  +H  E  YSC  C ++F  K  M  HV SH     + ++C+
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 85 ICG 87
           CG
Sbjct: 70 SCG 72

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 25  CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE 84
           C +C K +        HL  H +   Y C++C  +F+ KSDM+KH   H    E+   C+
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQ 61
Query: 85  ICGHVVDEMP-VATQSSKYPG 104
           +CG    +   + T S K+ G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
          +CP C K ++     Q H  TH  E  Y C  C   F+  SD++KH  +H    E+ + C
Sbjct: 6  KCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTG--EKPYKC 63
Query: 84 EICG 87
            CG
Sbjct: 64 PECG 67

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 26 PVCKKIYTDQQLFQNHLETHDNEMDYSC--EHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
          P C K+YT     + HL TH  E  Y C  E CD +F    ++ +H   H   +   F C
Sbjct: 21 PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP--FQC 78
Query: 84 EIC 86
           +C
Sbjct: 79 GVC 81

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 26  PVCKKIYTDQQLFQNHLETHDNEMDYSCE--HCDMQFNCKSDMRKHVHSHLS 75
           P C KI+   +  + H  TH  E  + CE   CD +F   SD +KH+H H S
Sbjct: 96  PGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
          +C VC K ++ +   + H+  H     Y C+ CD      S + KH+  H   +ER F C
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH--SDERPFKC 67
Query: 84 EIC 86
          +IC
Sbjct: 68 QIC 70

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 25  CPV--CKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFV 82
           CPV  C + ++ +     H+  H  +  + C  C   F+ ++ +  H+ +H    E+ F 
Sbjct: 7   CPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTG--EKPFA 64
Query: 83  CEICGHVVDEMPVATQSSK 101
           C+ICG     +   T+ +K
Sbjct: 65  CDICGRKFATLHTRTRHTK 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	111
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-04

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.5 bits (106), Expect = 9e-08
 Identities = 9/44 (20%), Positives = 17/44 (38%)

Query: 44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICG 87
          T + E  Y C+ C   +   S+  +H  +      + + C  C 
Sbjct: 4  TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCF 47

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 24 QCPVCKKIYTDQQLFQNHLET--HDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
          +C VC ++YT    F  H  T    N   Y C  C  +F  K +M  HV   
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.5 bits (101), Expect = 6e-07
 Identities = 12/49 (24%), Positives = 17/49 (34%)

Query: 39 QNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICG 87
           +   TH  E  Y C  C  +F     M+ H+    +     F C  C 
Sbjct: 4  GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCD 52

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMD--YSCEHCDMQFNCKSDMRKHV 70
          +C +C   +T     + H+     E    + C HCD     KSD+  H+
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.0 bits (99), Expect = 1e-06
 Identities = 12/67 (17%), Positives = 18/67 (26%), Gaps = 4/67 (5%)

Query: 24 QCPVCKKIYTDQQLFQNHLETHDN---EMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERG 80
          QC +C      +     H   H      + + CE C  +F     +  H           
Sbjct: 9  QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS-HPALLL 67

Query: 81 FVCEICG 87
             E  G
Sbjct: 68 APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 51 YSCEHCDMQFNCKSDMRKHVHSH-LSMEERGFVCEICG 87
            CE C      K+ +  H   H  ++    F CE CG
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCG 45

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
          QC +C + ++       H+ TH  E  ++C+ C  +F    + ++H            + 
Sbjct: 5  QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ---HILPILE 61

Query: 84 EICG 87
          +   
Sbjct: 62 DKVE 65

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSC--EHCDMQFNCKSDMRKHVHSHLSMEERGF 81
            P C K+YT     + HL TH  E  Y C  E CD +F    ++ +H   H     + F
Sbjct: 19 DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG--AKPF 76

Query: 82 VCEICG 87
           C +C 
Sbjct: 77 QCGVCN 82

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 4e-05
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 25 CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
          C  C        + + H+ TH +   Y C +C+  F  K ++ KH+ S 
Sbjct: 4  CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 25 CPVCKKIYTDQQLFQNHL-ETHDNEMDYSCEH--CDMQFNCKSDMRKHVHSHLSMEERGF 81
           P C +I++++Q   +H    H ++  +SC    C   FN K  +++H+  H     R +
Sbjct: 12 FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD--TRDY 69

Query: 82 VCEICG 87
          +CE  G
Sbjct: 70 ICEFSG 75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC 83
           C +C KI+ D      H  +H  E  YSC  C ++F  K  M  HV SH     + ++C
Sbjct: 9  ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 84 EICG 87
          + CG
Sbjct: 69 QSCG 72

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 25 CPVCKKIYTDQQLFQNHLETHDNEMDYSCEH--CDMQFNCKSDMRKHVHSHL-SMEERGF 81
             C K +      + H  +H  ++ Y C H  CD +F+  S +++H   H     ++  
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65

Query: 82 VCEICG 87
           C   G
Sbjct: 66 SCSFVG 71

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSC--EHCDMQFNCKSDMRKHVHSHLSMEERGF 81
              C K YT     + HL TH  E  Y C  + C  +F    ++ +H   H     R F
Sbjct: 9  DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG--HRPF 66

Query: 82 VCEICG 87
           C+ C 
Sbjct: 67 QCQKCD 72

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.5 bits (80), Expect = 5e-04
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
             +   E  + C+ C M F+    + KH+ SH
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 34.4 bits (80), Expect = 7e-04
 Identities = 9/49 (18%), Positives = 18/49 (36%)

Query: 25 CPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
          C  C    + +   + H   H  +  + C +C       S++ KH+   
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 34.7 bits (81), Expect = 9e-04
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 24 QCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
          QC +C + ++       H+ TH  E  ++C+ C  +F    + ++H   H
Sbjct: 36 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	111
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.93
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.9
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.88
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.88
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.88
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.87
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.87
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.87
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.84
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.83
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.81
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.81
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.8
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.8
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.8
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.79
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.78
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.78
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.76
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.76
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.76
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.74
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.73
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.7
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.68
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.67
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.67
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.66
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.65
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.64
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.63
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.63
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.63
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.62
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.61
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.61
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.61
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.61
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.6
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.6
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.6
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.59
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.59
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.59
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.58
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.57
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.55
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.53
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.53
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.52
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.51
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.51
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.49
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.47
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.44
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.44
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.44
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.44
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.44
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.43
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.42
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.41
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.4
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.4
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.39
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.38
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.38
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.37
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.37
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.37
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.36
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.36
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.35
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.35
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.35
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.34
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.32
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.31
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.31
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.31
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.24
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.21
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.21
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.2
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.2
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.2
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.19
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.19
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.19
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.19
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.18
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.18
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.17
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.17
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.16
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.16
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.15
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.12
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.12
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.04
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.01
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.98
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.93
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.92
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.9
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.87
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.85
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.85
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.83
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.82
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.82
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.8
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.76
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.74
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.69
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.69
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.68
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.67
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.61
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.6
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.59
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.58
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.57
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.57
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.57
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.54
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.54
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.53
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.53
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.52
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.51
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.49
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.49
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.48
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.45
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.45
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.45
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.43
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.43
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.42
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.79
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.78
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.78
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.77
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.4
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.74
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.36
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.35
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.35
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.34
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.34
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.33
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.3
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.6
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.26
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.21
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.18
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.13
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.87
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.77
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.43
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.36
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.61
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.51
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.42
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.24
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.42
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	93.66
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.36
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	92.12
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.63
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.43
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.02
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	88.94
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	88.7
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	87.51
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.8
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	84.35
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	81.82

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.93  E-value=1.9e-26  Score=134.97  Aligned_cols=91  Identities=25%  Similarity=0.376  Sum_probs=86.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccch
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMP   94 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~   94 (111)
                      ..++|+++|.|++|++.|.....|..|+++|+++++|.|.+|+..|.....|..|++.|+  +++||.|..|++.|....
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHT--GERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHH--TCCCEEESSSCCEESSHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccC--CCccccCCCCCCCcCCHH
Confidence            357899999999999999999999999999999999999999999999999999999998  899999999999999999


Q ss_pred             hHHhhccccCccc
Q psy370           95 VATQSSKYPGQQN  107 (111)
Q Consensus        95 ~l~~h~~~~~~~~  107 (111)
                      .|..|++++|.++
T Consensus        93 ~L~~H~~~hh~~~  105 (133)
T 2lt7_A           93 FMSSHIKSVHSQD  105 (133)
T ss_dssp             HHHHHHHHHTCCC
T ss_pred             HHHHHhHHhcCCC
Confidence            9999999998653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=1.1e-23  Score=116.32  Aligned_cols=91  Identities=24%  Similarity=0.456  Sum_probs=86.3

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchh
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPV   95 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~   95 (111)
                      +.+++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|.  ++++|.|..|++.|.....
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~   79 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS--DERPFKCQICPYASRNSSQ   79 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSC--CCCCEECSSSSCEESSHHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhC--CCCCccCCCCCCccCCHHH
Confidence            46788999999999999999999999999999999999999999999999999999998  8999999999999999999


Q ss_pred             HHhhccccCcccc
Q psy370           96 ATQSSKYPGQQNQ  108 (111)
Q Consensus        96 l~~h~~~~~~~~~  108 (111)
                      |..|++.|+.+..
T Consensus        80 l~~H~~~h~~~~~   92 (96)
T 2dmd_A           80 LTVHLRSHTGDSG   92 (96)
T ss_dssp             HHHHHTTCCSCCC
T ss_pred             HHHHHHHhcCCCC
Confidence            9999999987654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.88  E-value=1.5e-22  Score=113.65  Aligned_cols=90  Identities=22%  Similarity=0.402  Sum_probs=84.7

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchh
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPV   95 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~   95 (111)
                      ....+++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|.  ++++|.|..|++.|.....
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS--KEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSC--CCCTTSCSSSCCCCSSHHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhC--CCCCeECCCcCCcccCHHH
Confidence            34667899999999999999999999999999999999999999999999999999998  8999999999999999999


Q ss_pred             HHhhccccCccc
Q psy370           96 ATQSSKYPGQQN  107 (111)
Q Consensus        96 l~~h~~~~~~~~  107 (111)
                      |..|+++|+.+.
T Consensus        89 L~~H~~~H~~~~  100 (106)
T 2ee8_A           89 LAVHKTLHMQTS  100 (106)
T ss_dssp             HHHHHHHTTSCC
T ss_pred             HHHHHHHhCCCC
Confidence            999999988654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.88  E-value=5.3e-23  Score=112.30  Aligned_cols=87  Identities=21%  Similarity=0.542  Sum_probs=80.0

Q ss_pred             ccCcccCC--CcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhH
Q psy370           19 IFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVA   96 (111)
Q Consensus        19 ~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l   96 (111)
                      ++++|.|+  .|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.|.  ++++|.|..|++.|.....|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT--GEKPFACDICGRKFARSDER   78 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--CCCCEECTTTCCEESSHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcC--CCCCccCCCCCchhCCHHHH
Confidence            46899998  699999999999999999999999999999999999999999999998  89999999999999999999


Q ss_pred             HhhccccCccc
Q psy370           97 TQSSKYPGQQN  107 (111)
Q Consensus        97 ~~h~~~~~~~~  107 (111)
                      ..|+++|+.+.
T Consensus        79 ~~H~~~H~~~k   89 (90)
T 1a1h_A           79 KRHTKIHLRQK   89 (90)
T ss_dssp             HHHHGGGGC--
T ss_pred             HHHHHHhcccC
Confidence            99999988653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.88  E-value=4.5e-23  Score=116.54  Aligned_cols=89  Identities=18%  Similarity=0.302  Sum_probs=84.5

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccch
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMP   94 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~   94 (111)
                      ..|+++++|.| .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|++.|.  ++++|.|..|++.|....
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~   79 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT--GIKPYECNICAKRFMWRD   79 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTC--CCCCEECSSSCCEESCHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcC--CCCCeeCCCCcchhcCHH
Confidence            46899999999 999999999999999999999999999999999999999999999998  899999999999999999


Q ss_pred             hHHhhccccCcc
Q psy370           95 VATQSSKYPGQQ  106 (111)
Q Consensus        95 ~l~~h~~~~~~~  106 (111)
                      .|..|++.++..
T Consensus        80 ~l~~H~~~~~~~   91 (110)
T 2csh_A           80 SFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHcccc
Confidence            999999988753

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2e-22  Score=111.03  Aligned_cols=89  Identities=26%  Similarity=0.472  Sum_probs=80.8

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhH
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVA   96 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l   96 (111)
                      .+++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.+..+++|.|..|++.|.....|
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            36788999999999999999999999999999999999999999999999999999983223899999999999999999


Q ss_pred             Hhhcc-ccCc
Q psy370           97 TQSSK-YPGQ  105 (111)
Q Consensus        97 ~~h~~-~~~~  105 (111)
                      ..|++ .|..
T Consensus        82 ~~H~~~~H~~   91 (95)
T 2yt9_A           82 NGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHTSCC
T ss_pred             HHHHHHhcCC
Confidence            99997 4543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=1.2e-22  Score=114.32  Aligned_cols=92  Identities=14%  Similarity=0.164  Sum_probs=84.1

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccc
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEM   93 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~   93 (111)
                      ...|+++++|.|.+|++.|.....|..|+++|  .++|.|.+|++.|.....|..|++ |.  ++++|.|..|++.|...
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~--~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KC--EYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HC--STGGGEEGGGTEECSSH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cC--CCCCccCccccchhCCH
Confidence            34688999999999999999999999999998  479999999999999999999996 87  89999999999999999


Q ss_pred             hhHHhhccccCcccccc
Q psy370           94 PVATQSSKYPGQQNQLF  110 (111)
Q Consensus        94 ~~l~~h~~~~~~~~~~~  110 (111)
                      ..|..|++..|.++++|
T Consensus        83 ~~L~~H~~~~H~~~~~~   99 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMA   99 (107)
T ss_dssp             HHHHHHHHHTSCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCC
Confidence            99999999666676665

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.87  E-value=1.6e-22  Score=108.56  Aligned_cols=81  Identities=27%  Similarity=0.598  Sum_probs=78.0

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhcc
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSK  101 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~  101 (111)
                      +|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT--GEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHH--TCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhc--CCCCCcCCCcchhhCChHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999998  8999999999999999999999999


Q ss_pred             ccC
Q psy370          102 YPG  104 (111)
Q Consensus       102 ~~~  104 (111)
                      .|+
T Consensus        79 ~H~   81 (82)
T 2kmk_A           79 KHT   81 (82)
T ss_dssp             HHC
T ss_pred             hhC
Confidence            876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=2.3e-22  Score=114.41  Aligned_cols=95  Identities=12%  Similarity=0.189  Sum_probs=85.2

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHH--cCCCCCcc-ccccCccc--CCHHHHHHHHHhccCCCCCceecCCCc
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLET--HDNEMDYS-CEHCDMQF--NCKSDMRKHVHSHLSMEERGFVCEICG   87 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~--h~~~~~~~-c~~c~~~f--~~~~~l~~h~~~h~~~~~~~~~C~~C~   87 (111)
                      ....|+++++|.|.+|++.|.....|..|+++  |.+.+++. |..|+..|  .....|..|++.|.  ++++|.|..|+
T Consensus        10 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~--~~~~~~C~~C~   87 (115)
T 2dmi_A           10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED--AQKVLKCMYCG   87 (115)
T ss_dssp             CCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC--CCSSCBCSSSC
T ss_pred             heeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC--CCcceECCCCC
Confidence            34578999999999999999999999999998  76666654 99999988  89999999999998  89999999999


Q ss_pred             cccccchhHHhhccccCccccc
Q psy370           88 HVVDEMPVATQSSKYPGQQNQL  109 (111)
Q Consensus        88 ~~~~~~~~l~~h~~~~~~~~~~  109 (111)
                      +.|.....|..|++.++..+++
T Consensus        88 k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           88 HSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CBCSSHHHHHHHHHHTTTTTCS
T ss_pred             CccCCHHHHHHHHHHhCCcccC
Confidence            9999999999999998876553

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=3.1e-21  Score=110.71  Aligned_cols=90  Identities=20%  Similarity=0.337  Sum_probs=71.2

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHH---cCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLET---HDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDE   92 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~---h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~   92 (111)
                      .|.++++|.|+.|++.|.....|..|++.   +.++++|.|.+|++.|.....|..|++.|.  ++++|.|..|++.|..
T Consensus        29 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~  106 (124)
T 2dlq_A           29 KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT--GEMPYKCSSCSQQFMQ  106 (124)
T ss_dssp             HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHS--SSCSEECSSSCCEESS
T ss_pred             hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcC--CCCCccCCCccchhCC
Confidence            35667788888888888888888888775   466778888888888888888888888887  7888888888888888


Q ss_pred             chhHHhhccccCccc
Q psy370           93 MPVATQSSKYPGQQN  107 (111)
Q Consensus        93 ~~~l~~h~~~~~~~~  107 (111)
                      ...|..|++..|.++
T Consensus       107 ~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A          107 KKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHHCCCC
Confidence            888888887655543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.85  E-value=1.2e-21  Score=120.05  Aligned_cols=89  Identities=21%  Similarity=0.466  Sum_probs=76.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchh
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPV   95 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~   95 (111)
                      .|.++++|.|+.|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.|.  ++++|.|..|++.|.....
T Consensus        99 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~--~~~~~~C~~C~~~f~~~~~  176 (190)
T 2i13_A           99 THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT--GEKPYKCPECGKSFSRRDA  176 (190)
T ss_dssp             HHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--CCCCEECTTTCCEESSHHH
T ss_pred             hcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcC--CCCCeECCCCCCccCCHHH
Confidence            35667888999999999999889999999888899999999999999999999999887  7889999999999999999


Q ss_pred             HHhhccccCcc
Q psy370           96 ATQSSKYPGQQ  106 (111)
Q Consensus        96 l~~h~~~~~~~  106 (111)
                      |..|+++|+++
T Consensus       177 L~~H~~~H~~~  187 (190)
T 2i13_A          177 LNVHQRTHTGK  187 (190)
T ss_dssp             HHHHHTTC---
T ss_pred             HHHHHHhcCCC
Confidence            99999887764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.84  E-value=2.5e-21  Score=110.44  Aligned_cols=84  Identities=18%  Similarity=0.434  Sum_probs=45.4

Q ss_pred             ccccCcccCC--CcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec--CCCcccccc
Q psy370           17 YTIFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC--EICGHVVDE   92 (111)
Q Consensus        17 ~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C--~~C~~~~~~   92 (111)
                      |.++++|.|.  .|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.  ++++|.|  +.|++.|..
T Consensus        31 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           31 HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT--GEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHH--TCCCEECCSTTCCCEESS
T ss_pred             hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhc--CCCCeeCCCCCCccccCC
Confidence            3444555555  455555555555555555555555555555555555555555555554  4555555  455555555


Q ss_pred             chhHHhhccc
Q psy370           93 MPVATQSSKY  102 (111)
Q Consensus        93 ~~~l~~h~~~  102 (111)
                      ...|..|+++
T Consensus       109 ~~~L~~H~~~  118 (119)
T 2jp9_A          109 SDELVRHHNM  118 (119)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHhc
Confidence            5555555544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=6.8e-21  Score=108.64  Aligned_cols=88  Identities=19%  Similarity=0.439  Sum_probs=82.6

Q ss_pred             cccCcccCCC--cccccCCHHHHHHHHHHcCCCCCcccc--ccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccc
Q psy370           18 TIFVASQCPV--CKKIYTDQQLFQNHLETHDNEMDYSCE--HCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEM   93 (111)
Q Consensus        18 ~~~~~~~c~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~   93 (111)
                      +++++|.|..  |++.|.....|..|++.|.++++|.|.  .|+..|.....|..|++.|.  ++++|.|..|++.|...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT--GVKPFQCKTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcC--CCCCccCCccCchhCCH
Confidence            5788999997  999999999999999999999999999  79999999999999999998  89999999999999999


Q ss_pred             hhHHhhccccCccc
Q psy370           94 PVATQSSKYPGQQN  107 (111)
Q Consensus        94 ~~l~~h~~~~~~~~  107 (111)
                      ..|..|++.|+++.
T Consensus        80 ~~l~~H~~~h~~~~   93 (119)
T 2jp9_A           80 DHLKTHTRTHTGEK   93 (119)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhcCCC
Confidence            99999999887653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.8e-20  Score=107.47  Aligned_cols=90  Identities=17%  Similarity=0.367  Sum_probs=82.1

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhc-cCCCCCceecCCCccccccchhH
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH-LSMEERGFVCEICGHVVDEMPVA   96 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h-~~~~~~~~~C~~C~~~~~~~~~l   96 (111)
                      +++++|.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.+ ...++++|.|..|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            67889999999999999999999999999999999999999999999999999863 11278999999999999999999


Q ss_pred             HhhccccCccc
Q psy370           97 TQSSKYPGQQN  107 (111)
Q Consensus        97 ~~h~~~~~~~~  107 (111)
                      ..|+++|+.+.
T Consensus        83 ~~H~~~h~~~~   93 (124)
T 2dlq_A           83 RLHMVSHTGEM   93 (124)
T ss_dssp             HHHHHHHSSSC
T ss_pred             HHHHHHcCCCC
Confidence            99999887653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.83  E-value=1.4e-20  Score=102.40  Aligned_cols=82  Identities=26%  Similarity=0.550  Sum_probs=77.8

Q ss_pred             cCcccCCC--cccccCCHHHHHHHHHHcCCCCCcccc--ccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchh
Q psy370           20 FVASQCPV--CKKIYTDQQLFQNHLETHDNEMDYSCE--HCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPV   95 (111)
Q Consensus        20 ~~~~~c~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~   95 (111)
                      ...|.|..  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|++.|.  ++++|.|..|++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT--GHRPFQCQKCDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHH--CCCCEECSSSSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcC--CCCCccCCCCCcccCCHHH
Confidence            45789999  999999999999999999999999997  59999999999999999998  8999999999999999999


Q ss_pred             HHhhcccc
Q psy370           96 ATQSSKYP  103 (111)
Q Consensus        96 l~~h~~~~  103 (111)
                      |..|+++|
T Consensus        81 l~~H~~~H   88 (89)
T 2wbs_A           81 LALHMKRH   88 (89)
T ss_dssp             HHHHGGGG
T ss_pred             HHHHHHhh
Confidence            99999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.83  E-value=2.8e-20  Score=103.19  Aligned_cols=86  Identities=24%  Similarity=0.514  Sum_probs=80.1

Q ss_pred             ccccCcccCCC--cccccCCHHHHHHHHHHcCCCCCcccc--ccCcccCCHHHHHHHHHhccCCCCCceecCCCcccccc
Q psy370           17 YTIFVASQCPV--CKKIYTDQQLFQNHLETHDNEMDYSCE--HCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDE   92 (111)
Q Consensus        17 ~~~~~~~~c~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~   92 (111)
                      -..+++|.|..  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|++.|.  ++++|.|..|++.|..
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~   87 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT--GAKPFQCGVCNRSFSR   87 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHT--SCCSCBCSSSCCBCSS
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhC--CCCCeECCCCcCccCC
Confidence            35567899986  999999999999999999999999996  69999999999999999998  8999999999999999


Q ss_pred             chhHHhhccccC
Q psy370           93 MPVATQSSKYPG  104 (111)
Q Consensus        93 ~~~l~~h~~~~~  104 (111)
                      ...|..|+++|.
T Consensus        88 ~~~l~~H~~~H~   99 (100)
T 2ebt_A           88 SDHLALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=1.3e-20  Score=108.33  Aligned_cols=87  Identities=20%  Similarity=0.418  Sum_probs=78.6

Q ss_pred             ccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccc--cCcccCCHHHHHHHHHhccCCCCCceecC--CCccccccch
Q psy370           19 IFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEH--CDMQFNCKSDMRKHVHSHLSMEERGFVCE--ICGHVVDEMP   94 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~~C~--~C~~~~~~~~   94 (111)
                      ++++|.|..|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|.  ++++|.|.  .|++.|....
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~  108 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT--GDRPYVCPFDGCNKKFAQST  108 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHH--CCCCCCCCSTTCCCCCSSTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC--CCCceECCCCCCCCccCCHH
Confidence            6789999999999999999999999999999999986  9999999999999999998  89999995  5999999999


Q ss_pred             hHHhhccccCccc
Q psy370           95 VATQSSKYPGQQN  107 (111)
Q Consensus        95 ~l~~h~~~~~~~~  107 (111)
                      .|..|+++|+.+.
T Consensus       109 ~L~~H~~~H~~~k  121 (124)
T 1ubd_C          109 NLKSHILTHAKAK  121 (124)
T ss_dssp             TTHHHHHHHC---
T ss_pred             HHHHHHHHHcccc
Confidence            9999999987653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=2.1e-20  Score=95.14  Aligned_cols=55  Identities=25%  Similarity=0.436  Sum_probs=34.9

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      |+||.|.+||+.|...+.|..|+++|+++++|.|.+|++.|...+.|..|++.|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Ht   56 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQ   56 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGS
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccC
Confidence            4566666666666666666666666666666666666666666666666666665

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.81  E-value=2.1e-20  Score=114.53  Aligned_cols=84  Identities=23%  Similarity=0.491  Sum_probs=43.2

Q ss_pred             ccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHh
Q psy370           19 IFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQ   98 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~   98 (111)
                      ++++|.|+.|++.|.....|..|++.|.++++|.|..|+..|.....|..|++.|.  ++++|.|..|++.|.....|..
T Consensus        74 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~  151 (190)
T 2i13_A           74 GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT--GEKPYKCPECGKSFSREDNLHT  151 (190)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHH
T ss_pred             CCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC--CCCCeECCCCCcccCCHHHHHH
Confidence            34444444455545444444455444444455555555555555555555555554  4555555555555555555555


Q ss_pred             hccccC
Q psy370           99 SSKYPG  104 (111)
Q Consensus        99 h~~~~~  104 (111)
                      |++.|+
T Consensus       152 H~~~H~  157 (190)
T 2i13_A          152 HQRTHT  157 (190)
T ss_dssp             HHHHHH
T ss_pred             HHHhcC
Confidence            555444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.81  E-value=1.6e-21  Score=106.31  Aligned_cols=83  Identities=13%  Similarity=0.324  Sum_probs=78.2

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhh
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQS   99 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h   99 (111)
                      +++|.|.+|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.++   ..+|.|..|++.|.....|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~---~~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH---ILPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC---CCcchHHHHHHHHHHHhhhHHH
Confidence            5789999999999999999999999999999999999999999999999999986   4889999999999999999999


Q ss_pred             ccccCc
Q psy370          100 SKYPGQ  105 (111)
Q Consensus       100 ~~~~~~  105 (111)
                      ++..|+
T Consensus        78 ~~~~h~   83 (88)
T 1llm_C           78 VARLKK   83 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            987663

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.80  E-value=1.1e-19  Score=108.08  Aligned_cols=82  Identities=21%  Similarity=0.475  Sum_probs=65.5

Q ss_pred             ccCCCcccccCCHHHHHHHHHHcCCCCCccccc--cCcccCCHHHHHHHHHhccCCCCCceecCC--CccccccchhHHh
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEH--CDMQFNCKSDMRKHVHSHLSMEERGFVCEI--CGHVVDEMPVATQ   98 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~--C~~~~~~~~~l~~   98 (111)
                      |.|..|++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|.  ++++|.|..  |++.|.....|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~--~~~~~~C~~~~C~k~f~~~~~L~~  140 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT--GEKPFKCEFEGCDRRFANSSDRKK  140 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTC--SSCSBCCSSTTCCCCBSSHHHHHH
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhC--CCCCccCCCCCCCCccCCHHHHHH
Confidence            678888888888888888888887778888877  8888888888888888777  677888876  8888888888888


Q ss_pred             hccccCcc
Q psy370           99 SSKYPGQQ  106 (111)
Q Consensus        99 h~~~~~~~  106 (111)
                      |+++|+.+
T Consensus       141 H~~~H~~~  148 (155)
T 2rpc_A          141 HMHVHTSD  148 (155)
T ss_dssp             SSTTTTSC
T ss_pred             HHHHhcCC
Confidence            88876654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=5.1e-20  Score=109.40  Aligned_cols=86  Identities=29%  Similarity=0.563  Sum_probs=53.9

Q ss_pred             ccccCcccCCC--cccccCCHHHHHHHHHHcCCCCCccccc--cCcccCCHHHHHHHH-HhccCCCCCceecCC--Cccc
Q psy370           17 YTIFVASQCPV--CKKIYTDQQLFQNHLETHDNEMDYSCEH--CDMQFNCKSDMRKHV-HSHLSMEERGFVCEI--CGHV   89 (111)
Q Consensus        17 ~~~~~~~~c~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~-~~h~~~~~~~~~C~~--C~~~   89 (111)
                      |+++++|.|..  |++.|.....|..|+++|.++++|.|.+  |++.|.....|..|+ +.|.  ++++|.|..  |++.
T Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~--~~~~~~C~~~~C~~~  139 (155)
T 2gli_A           62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS--NEKPYVCKLPGCTKR  139 (155)
T ss_dssp             HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTC--SCCCEECCSTTTCCE
T ss_pred             cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcC--CCCCeeCCCCCCccc
Confidence            44556666653  6666666666666666666666666665  666666666666665 4555  566666655  6666


Q ss_pred             cccchhHHhhccccC
Q psy370           90 VDEMPVATQSSKYPG  104 (111)
Q Consensus        90 ~~~~~~l~~h~~~~~  104 (111)
                      |.....|..|++.+|
T Consensus       140 f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          140 YTDPSSLRKHVKTVH  154 (155)
T ss_dssp             ESSHHHHHHHHHHSC
T ss_pred             cCCHHHHHHHHHhhc
Confidence            666666666666554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.80  E-value=5.8e-20  Score=93.46  Aligned_cols=58  Identities=21%  Similarity=0.440  Sum_probs=55.0

Q ss_pred             CCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           47 NEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        47 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      +|+||.|.+|++.|...+.|..|++.|+  |++||.|..||+.|...+.|..|+++|.++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht--~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHL--GYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHH--TCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhC--CCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            4799999999999999999999999998  899999999999999999999999998764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.79  E-value=1.9e-19  Score=96.97  Aligned_cols=78  Identities=22%  Similarity=0.507  Sum_probs=74.1

Q ss_pred             cccC--CCcccccCCHHHHHHHHHHcCCCCCccccc--cCcccCCHHHHHHHHHhccCCCCCceecCC---Cccccccch
Q psy370           22 ASQC--PVCKKIYTDQQLFQNHLETHDNEMDYSCEH--CDMQFNCKSDMRKHVHSHLSMEERGFVCEI---CGHVVDEMP   94 (111)
Q Consensus        22 ~~~c--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~---C~~~~~~~~   94 (111)
                      ||.|  +.|++.|.....|..|+++|.++++|.|..  |++.|.....|..|++.|.  +   |.|..   |++.|....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~---~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA--G---YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH--S---EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC--C---CCCCCCCCCCCccCCHH
Confidence            5889  999999999999999999999999999988  9999999999999999997  4   99999   999999999


Q ss_pred             hHHhhccccC
Q psy370           95 VATQSSKYPG  104 (111)
Q Consensus        95 ~l~~h~~~~~  104 (111)
                      .|..|++.+|
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            9999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=3.4e-19  Score=94.92  Aligned_cols=72  Identities=25%  Similarity=0.654  Sum_probs=67.5

Q ss_pred             cccCcccCCC--cccccCCHHHHHHHHH-HcCCCCCccccc--cCcccCCHHHHHHHHHhccCCCCCceecCCCccccc
Q psy370           18 TIFVASQCPV--CKKIYTDQQLFQNHLE-THDNEMDYSCEH--CDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVD   91 (111)
Q Consensus        18 ~~~~~~~c~~--C~~~f~~~~~l~~h~~-~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~   91 (111)
                      +++++|.|..  |++.|.....|..|++ .|.++++|.|..  |++.|.....|..|++.|.  ++++|.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS--DTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHH--TSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhC--CCCCeeCCCCCCCCC
Confidence            5678888886  9999999999999999 799999999999  9999999999999999998  899999999999984

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.78  E-value=3.4e-19  Score=102.32  Aligned_cols=86  Identities=23%  Similarity=0.439  Sum_probs=77.8

Q ss_pred             ccCcccCC--CcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC--Cccccccch
Q psy370           19 IFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI--CGHVVDEMP   94 (111)
Q Consensus        19 ~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~--C~~~~~~~~   94 (111)
                      .+++|.|+  .|++.|.+...|..|+++| +.++|.|..|++.|.....|..|++.|.  ++++|.|..  |++.|....
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT--GEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTS--CCCCEECCSTTCCCEESCHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcC--CCCCeeCCCCCCcCccCCHH
Confidence            35689999  8999999999999999999 7899999999999999999999999998  899999985  999999999


Q ss_pred             hHHhhccccCccc
Q psy370           95 VATQSSKYPGQQN  107 (111)
Q Consensus        95 ~l~~h~~~~~~~~  107 (111)
                      .|..|++.|+.+.
T Consensus        79 ~l~~H~~~h~~~~   91 (124)
T 1ubd_C           79 NLRTHVRIHTGDR   91 (124)
T ss_dssp             HHHHHHHHHHCCC
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999887643

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=4.7e-19  Score=103.45  Aligned_cols=80  Identities=19%  Similarity=0.269  Sum_probs=71.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCC----CCCceecCCCccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSM----EERGFVCEICGHVVD   91 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~----~~~~~~C~~C~~~~~   91 (111)
                      .|+++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|...+.|..|++.+++.    ..++|.|..|++.|.
T Consensus        44 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           44 IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             HcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            5789999999999999999999999999999999999999999999999999999988621    135689999999887


Q ss_pred             cchh
Q psy370           92 EMPV   95 (111)
Q Consensus        92 ~~~~   95 (111)
                      ....
T Consensus       124 ~~~~  127 (133)
T 2lt7_A          124 RQYA  127 (133)
T ss_dssp             CCCH
T ss_pred             hccc
Confidence            6543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.77  E-value=1.3e-18  Score=106.51  Aligned_cols=88  Identities=19%  Similarity=0.335  Sum_probs=56.9

Q ss_pred             CccccCcccCC--CcccccCCHHHHHHHH-HHc-CCCCCccc--cccCcccCCHHHHHHHHHhccCCCCCceecCC--Cc
Q psy370           16 SYTIFVASQCP--VCKKIYTDQQLFQNHL-ETH-DNEMDYSC--EHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI--CG   87 (111)
Q Consensus        16 ~~~~~~~~~c~--~C~~~f~~~~~l~~h~-~~h-~~~~~~~c--~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~--C~   87 (111)
                      .|+++++|.|.  .|++.|.+...|..|+ +.| .+.++|.|  ..|++.|.....|..|++.|.  ++++|.|..  |+
T Consensus        66 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~~~C~  143 (190)
T 1tf6_A           66 THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT--QQLPYECPHEGCD  143 (190)
T ss_dssp             TTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS--SSCSSBCCSSSCC
T ss_pred             HccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC--CCCCccCCCCCCC
Confidence            45556666666  6666666666666666 445 34556666  666666666666666666665  566666655  77


Q ss_pred             cccccchhHHhhccccCc
Q psy370           88 HVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        88 ~~~~~~~~l~~h~~~~~~  105 (111)
                      +.|.....|..|+++|++
T Consensus       144 k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          144 KRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             CBCSSHHHHHHHHTSSCS
T ss_pred             chhcCHHHHHHHHHHhCC
Confidence            777666666666666554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.76  E-value=5.1e-18  Score=100.80  Aligned_cols=89  Identities=15%  Similarity=0.328  Sum_probs=80.7

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHH-cCCCCC--------ccccccCcccCCHHHHHHHHHhccCCCCCceecCC--
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLET-HDNEMD--------YSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI--   85 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~--   85 (111)
                      ...+..|.|..|++.|.....|..|++. |.+..+        |.|..|++.|.....|..|++.|.  ++++|.|..  
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~   97 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT--GEKPFPCPFPG   97 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHH--CCCSEECSCTT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcC--CCCcccCCcCC
Confidence            3456789999999999999999999997 877654        799999999999999999999998  899999998  


Q ss_pred             CccccccchhHHhhccccCccc
Q psy370           86 CGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        86 C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      |++.|.....|..|++.|+.+.
T Consensus        98 C~~~f~~~~~L~~H~~~h~~~~  119 (155)
T 2rpc_A           98 CGKIFARSENLKIHKRTHTGEK  119 (155)
T ss_dssp             TCCEESCHHHHHHHHTTTCSSC
T ss_pred             CCCccCCHHHHHHHHHhhCCCC
Confidence            9999999999999999887653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.7e-18  Score=102.73  Aligned_cols=88  Identities=16%  Similarity=0.345  Sum_probs=78.6

Q ss_pred             CccccCcccCCC-----cccccCCHHHHHHHHHHcCCCCCccccc--cCcccCCHHHHHHHHHhccCCCCCceecCC--C
Q psy370           16 SYTIFVASQCPV-----CKKIYTDQQLFQNHLETHDNEMDYSCEH--CDMQFNCKSDMRKHVHSHLSMEERGFVCEI--C   86 (111)
Q Consensus        16 ~~~~~~~~~c~~-----C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~--C   86 (111)
                      .|+++++|.|.+     |++.|.....|..|+++|.++++|.|.+  |++.|.....|..|++.|.  ++++|.|..  |
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C  105 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT--GEKPYMCEHEGC  105 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTT--TCCCEECCSTTC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcC--CCCCeeCCCCCC
Confidence            467788888875     3499999999999999999999999985  9999999999999999998  899999998  9


Q ss_pred             ccccccchhHHhhc-cccCc
Q psy370           87 GHVVDEMPVATQSS-KYPGQ  105 (111)
Q Consensus        87 ~~~~~~~~~l~~h~-~~~~~  105 (111)
                      ++.|.....|..|+ +.|.+
T Consensus       106 ~~~f~~~~~L~~H~~~~H~~  125 (155)
T 2gli_A          106 SKAFSNASDRAKHQNRTHSN  125 (155)
T ss_dssp             CCEESSSSTTHHHHHHTTCS
T ss_pred             CCccCCHHHHHHHHHHhcCC
Confidence            99999999999999 45543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=2.6e-18  Score=91.26  Aligned_cols=69  Identities=20%  Similarity=0.306  Sum_probs=63.4

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      ....+.++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+  +++||.|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~--~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT--GSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSC--CCCCCCC
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhC--CCCCCCC
Confidence            34456788999999999999999999999999999999999999999999999999999998  8999987

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.74  E-value=8.7e-18  Score=102.84  Aligned_cols=87  Identities=26%  Similarity=0.471  Sum_probs=44.4

Q ss_pred             ccccCcccC--CCcccccCCHHHHHHHHHHcCCCCCcccc--ccCcccCCHHHHHHHH-HhccCCCCCceec--CCCccc
Q psy370           17 YTIFVASQC--PVCKKIYTDQQLFQNHLETHDNEMDYSCE--HCDMQFNCKSDMRKHV-HSHLSMEERGFVC--EICGHV   89 (111)
Q Consensus        17 ~~~~~~~~c--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~-~~h~~~~~~~~~C--~~C~~~   89 (111)
                      |+++++|.|  +.|++.|.....|..|+++|.++++|.|.  .|+..|.....|..|+ +.|. .++++|.|  ..|++.
T Consensus        37 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~-~~~~~~~C~~~~C~k~  115 (190)
T 1tf6_A           37 HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN-IKICVYVCHFENCGKA  115 (190)
T ss_dssp             HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSS-TTTSCCEECSSSSCEE
T ss_pred             cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcC-CCcceeeCCCCCCccc
Confidence            344455555  44555555555555555555555555555  4555555555555555 2331 13445555  455555


Q ss_pred             cccchhHHhhccccC
Q psy370           90 VDEMPVATQSSKYPG  104 (111)
Q Consensus        90 ~~~~~~l~~h~~~~~  104 (111)
                      |.....|..|+++|+
T Consensus       116 f~~~~~L~~H~~~H~  130 (190)
T 1tf6_A          116 FKKHNQLKVHQFSHT  130 (190)
T ss_dssp             CSSHHHHHHHHGGGS
T ss_pred             cCCHHHHHHHHHHhC
Confidence            555555555555544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=8.5e-18  Score=88.57  Aligned_cols=67  Identities=21%  Similarity=0.422  Sum_probs=58.1

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCce
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGF   81 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~   81 (111)
                      ....++++++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+  +++||
T Consensus         8 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~kp~   74 (74)
T 2lce_A            8 HSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS--GEKPY   74 (74)
T ss_dssp             ---CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHC--CSCCC
T ss_pred             cccccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcC--CCCCC
Confidence            44467788999999999999999999999999999999999999999999999999999997  77775

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=7.4e-18  Score=94.16  Aligned_cols=73  Identities=18%  Similarity=0.356  Sum_probs=65.7

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHH-Hc---CCCCCccccccCcccCCHHHHHHH-HHhccCCCCCceecCCCcc
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLE-TH---DNEMDYSCEHCDMQFNCKSDMRKH-VHSHLSMEERGFVCEICGH   88 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~-~h---~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~~~~~~~~C~~C~~   88 (111)
                      ....+|+++|.|..|++.|...+.|..|++ .|   +++++|.|.+|++.|...+.|..| ++.|+  +++||.|..+..
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht--gekpy~C~~~~~   87 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP--GEENFKLTMVKR   87 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTST--TCCCEEEEECCC
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcC--CCCCeeCCcccC
Confidence            345688999999999999999999999997 59   568999999999999999999999 89998  899999987554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=2.4e-17  Score=88.88  Aligned_cols=76  Identities=20%  Similarity=0.374  Sum_probs=69.1

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHHcCCC----CCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcc
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE----MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGH   88 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~----~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~   88 (111)
                      ....|+++++|.|.+|++.|.....|..|++.+...    ++|.|.+|++.|.....|..|++.|.  +++++.|..|+.
T Consensus         6 H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--~~~~~~~~~~~~   83 (86)
T 1x6h_A            6 SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA--GPDGVEGENSGP   83 (86)
T ss_dssp             CSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCC--CCCSCCCCCCCC
T ss_pred             ccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHcc--CCCCcccCCCCC
Confidence            455789999999999999999999999999876654    78999999999999999999999998  899999999998


Q ss_pred             cc
Q psy370           89 VV   90 (111)
Q Consensus        89 ~~   90 (111)
                      .+
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.5e-17  Score=85.34  Aligned_cols=65  Identities=15%  Similarity=0.294  Sum_probs=58.0

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCce
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGF   81 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~   81 (111)
                      .+++++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+  +++|.
T Consensus         2 ss~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~--~~~p~   66 (70)
T 1x5w_A            2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH--GDMSG   66 (70)
T ss_dssp             CSCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHH--SSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHh--CCCCC
Confidence            467889999999999999999999999999999999999999999999999999999887  66654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.68  E-value=5.7e-17  Score=87.75  Aligned_cols=54  Identities=19%  Similarity=0.487  Sum_probs=28.9

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHH
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHV   70 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~   70 (111)
                      +...++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            444455555555555555555555555555555555555555555555555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=4.1e-18  Score=94.49  Aligned_cols=64  Identities=19%  Similarity=0.403  Sum_probs=38.9

Q ss_pred             CccccCcccCCCcccccC-CHHHHHHHHHHcCC-CCCccccccCcccCCHHHHHHHHHhccCCCCCce
Q psy370           16 SYTIFVASQCPVCKKIYT-DQQLFQNHLETHDN-EMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGF   81 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~-~~~~l~~h~~~h~~-~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~   81 (111)
                      .|+++++|.|.+|++.|. ....|..|+++|.+ +++|.|.+|++.|.....|..|++.|+  +++|.
T Consensus        18 ~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~--~~kp~   83 (98)
T 2gqj_A           18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH--SAKPS   83 (98)
T ss_dssp             TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS--CSCSS
T ss_pred             HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc--CCCCC
Confidence            455566666666666666 66666666666655 566666666666666666666666555  45543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.9e-16  Score=82.96  Aligned_cols=61  Identities=23%  Similarity=0.441  Sum_probs=49.7

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ...|+++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            3457788888888888888888888888888888888888888888888888888888776

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=6.2e-17  Score=85.84  Aligned_cols=65  Identities=22%  Similarity=0.380  Sum_probs=30.2

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHH-hccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVH-SHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      |+++|+++++|.|.+|++.|.....|..|++ .|.+ ++++|.|..|++.|.....|..|++.+|..
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~-~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE-NVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS-SCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC-CCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            3344444444444444444444444444443 2320 124455555555555555555555544443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=7.3e-17  Score=84.56  Aligned_cols=63  Identities=21%  Similarity=0.408  Sum_probs=58.8

Q ss_pred             HHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           43 ETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        43 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      ++|+++++|.|.+|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|+++|+.+.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHT--GEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGG--CSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcC--CCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            46889999999999999999999999999998  8999999999999999999999999987653

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=4.8e-16  Score=84.11  Aligned_cols=62  Identities=18%  Similarity=0.273  Sum_probs=55.5

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccc-cCccc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKY-PGQQN  107 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~-~~~~~  107 (111)
                      .+...++|.|.+|++.|.....|..|++.|+  +++||.|..|++.|.....|..|++. |.+++
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLH--AAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTS--CSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhcc--CCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3556788999999999999999999999998  89999999999999999999999854 55554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.7e-16  Score=82.66  Aligned_cols=62  Identities=18%  Similarity=0.327  Sum_probs=57.7

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      +|+++++|.|.+|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|++.|+.+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHC--TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGC--CSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            4678899999999999999999999999998  8999999999999999999999999988653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=2.1e-16  Score=83.95  Aligned_cols=65  Identities=18%  Similarity=0.311  Sum_probs=48.3

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCC---CCCccccccCcccCCHHHHHHHHH-hccCCCCCcee
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDN---EMDYSCEHCDMQFNCKSDMRKHVH-SHLSMEERGFV   82 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~---~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~~   82 (111)
                      .|+++++|.|.+|++.|.....|..|+++|.+   +++|.|..|++.|.....|..|++ .|.  ++++..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~--~~~~~~   69 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP--ALLLAP   69 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST--TTSSCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC--CCCCCc
Confidence            36778888888888888888888888888774   677888888888888888888874 343  455543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.63  E-value=1.8e-16  Score=79.27  Aligned_cols=54  Identities=17%  Similarity=0.349  Sum_probs=25.9

Q ss_pred             CCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccC
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ++|.|..|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|++.||
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHT--GEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHH--CCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcC--CCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            34444445545555555555544444  4445555555555555555555554443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1e-16  Score=82.53  Aligned_cols=59  Identities=31%  Similarity=0.492  Sum_probs=34.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHH-c-CCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLET-H-DNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~-h-~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      .|+++++|.|+.|++.|.....|..|++. | .++++|.|..|++.|...+.|..|++.++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            45566666666666666666666666655 5 35555666666666666666665555543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.62  E-value=3.5e-17  Score=94.61  Aligned_cols=83  Identities=14%  Similarity=0.250  Sum_probs=71.7

Q ss_pred             ccCcccCCCcccccC------CHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcccccc
Q psy370           19 IFVASQCPVCKKIYT------DQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDE   92 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~------~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~   92 (111)
                      .++.+.|.+|++.|.      ....|..|+ .|+++++|.|..|++.|.....|..|++.|    ++||.|..|++.|..
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H----~~~~~C~~C~k~f~~  112 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT----EHTKVCPVCKKEFTS  112 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT----CCCCBCTTTCCBCSS
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC----CCCCCCCCCCcccCC
Confidence            355677888877766      556667776 588899999999999999999999999987    678999999999999


Q ss_pred             chhHHhhccccCcc
Q psy370           93 MPVATQSSKYPGQQ  106 (111)
Q Consensus        93 ~~~l~~h~~~~~~~  106 (111)
                      ...|..|++.|++.
T Consensus       113 ~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          113 TDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHCCc
Confidence            99999999999864

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.6e-16  Score=88.05  Aligned_cols=72  Identities=8%  Similarity=0.160  Sum_probs=65.3

Q ss_pred             CHHHHHHHHHHcCCCCCccccccCcccC-CHHHHHHHHHhccCCC-CCceecCCCccccccchhHHhhccccCccc
Q psy370           34 DQQLFQNHLETHDNEMDYSCEHCDMQFN-CKSDMRKHVHSHLSME-ERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        34 ~~~~l~~h~~~h~~~~~~~c~~c~~~f~-~~~~l~~h~~~h~~~~-~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      ....+..|+++|.++++|.|.+|++.|. ....|..|++.|.  + +++|.|..|++.|.....|..|++.|+.+.
T Consensus         8 ~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~--~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            8 PGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ--KLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH--HHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc--CCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            3344678999999999999999999999 9999999999998  6 899999999999999999999999988654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.8e-16  Score=86.36  Aligned_cols=71  Identities=15%  Similarity=0.306  Sum_probs=55.6

Q ss_pred             ccCCHHHHHHHHHHcCCCCCccccccCccc-CCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhh-ccccC
Q psy370           31 IYTDQQLFQNHLETHDNEMDYSCEHCDMQF-NCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQS-SKYPG  104 (111)
Q Consensus        31 ~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f-~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h-~~~~~  104 (111)
                      .|.....+..|++.+.++++|.|..|++.| .....|..|++.|   ++++|.|..|++.|.....|..| +++|.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h---~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC---KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH---CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH---CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            455566677777777778888888888888 7888888888877   47788888888888888888888 66654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.61  E-value=1e-15  Score=80.50  Aligned_cols=61  Identities=20%  Similarity=0.536  Sum_probs=56.9

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      .+.++++|.|..|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|+++|+.+
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~--~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHT--GEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHC--CCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcC--CCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            4678899999999999999999999999998  899999999999999999999999988754

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.61  E-value=1e-15  Score=76.47  Aligned_cols=56  Identities=29%  Similarity=0.591  Sum_probs=50.5

Q ss_pred             ccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           19 IFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      |+++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999999999999999999875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=1.1e-15  Score=78.56  Aligned_cols=62  Identities=19%  Similarity=0.336  Sum_probs=56.6

Q ss_pred             HHcCCCCCccccccCcccCCHHHHHHHHHh-ccCCCCCceecCCCccccccchhHHhhccccCc
Q psy370           43 ETHDNEMDYSCEHCDMQFNCKSDMRKHVHS-HLSMEERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        43 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~-h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ++|+++++|.|..|++.|.....|..|++. |. .++++|.|..|++.|...+.|..|++.+|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~-~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK-RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS-SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcC-CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            568899999999999999999999999998 62 178999999999999999999999998874

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.60  E-value=1.6e-15  Score=75.75  Aligned_cols=52  Identities=25%  Similarity=0.613  Sum_probs=27.0

Q ss_pred             ccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      |.|..|++.|.....|..|+++|.++++|.|..|+..|.....|..|++.|.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            4555555555555555555555555555555555555555555555555443

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=2.2e-16  Score=85.02  Aligned_cols=69  Identities=23%  Similarity=0.428  Sum_probs=61.3

Q ss_pred             HHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCC---CCceecCCCccccccchhHHhhccccCccc
Q psy370           38 FQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSME---ERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        38 l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~---~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      +..|+++|+++++|.|.+|++.|.....|..|++.+.. .   +++|.|..|++.|.....|..|++.|+.+.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD-PNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC-SSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcC-CcCCCcceECCCCCChhCCHHHHHHHHHHccCCC
Confidence            45678899999999999999999999999999987762 2   278999999999999999999999998754

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=1.8e-15  Score=80.28  Aligned_cols=66  Identities=18%  Similarity=0.338  Sum_probs=58.0

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCC-CCCceecCCCccccccchhHHhhccccCccccc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSM-EERGFVCEICGHVVDEMPVATQSSKYPGQQNQL  109 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~-~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~  109 (111)
                      +|+++++|.|.+|++.|.....|..|++.|.+. ++++|.|..|++.|.....|..|++.+|.++..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            478899999999999999999999999999721 279999999999999999999999877766543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.6e-15  Score=83.80  Aligned_cols=62  Identities=19%  Similarity=0.405  Sum_probs=56.0

Q ss_pred             ccccCcccCCCccccc-CCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHH-HHhccCCCCCce
Q psy370           17 YTIFVASQCPVCKKIY-TDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKH-VHSHLSMEERGF   81 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f-~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h-~~~h~~~~~~~~   81 (111)
                      ++++++|.|++|++.| .....|..|+++| ++++|.|.+|++.|.....|..| ++.|+  ++..|
T Consensus        29 ~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~--~~p~~   92 (96)
T 2ctd_A           29 IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN--SLPSG   92 (96)
T ss_dssp             HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC--CCSSC
T ss_pred             hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC--CCCCC
Confidence            4568899999999999 9999999999999 99999999999999999999999 88886  44434

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.2e-15  Score=79.10  Aligned_cols=61  Identities=21%  Similarity=0.500  Sum_probs=56.3

Q ss_pred             cCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           45 HDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        45 h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      +.++++|.|.+|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|+++|+.+.
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHT--GEKPYKCDECGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTC--CSCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcC--CCcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            456799999999999999999999999998  7999999999999999999999999887653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.59  E-value=4.3e-15  Score=74.18  Aligned_cols=56  Identities=23%  Similarity=0.522  Sum_probs=52.9

Q ss_pred             CccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      +|.|..|+..|.....|..|++.|.  ++++|.|..|++.|.....|..|+++|+.+.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT--DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS--SCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC--CCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            5899999999999999999999998  8999999999999999999999999998764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.7e-15  Score=78.59  Aligned_cols=61  Identities=16%  Similarity=0.507  Sum_probs=35.5

Q ss_pred             CCCCccccCcccCC--CcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhc
Q psy370           13 IPGSYTIFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH   73 (111)
Q Consensus        13 ~~~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h   73 (111)
                      ....++++++|.|+  .|++.|.....|..|+++|.++++|.|..|++.|...+.|..|++.|
T Consensus        10 ~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             TSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             hhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            33345556666664  36666666666666666665555566666665565555555555544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.58  E-value=4e-15  Score=83.06  Aligned_cols=66  Identities=20%  Similarity=0.408  Sum_probs=61.7

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      .|.++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.  ++++|.+
T Consensus        39 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~--~~~~~~~  104 (106)
T 2ee8_A           39 THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM--QTSSPTA  104 (106)
T ss_dssp             HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT--SCCCCCC
T ss_pred             HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC--CCCCCcC
Confidence            46778899999999999999999999999999999999999999999999999999998  7888754

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=8.4e-15  Score=77.48  Aligned_cols=67  Identities=21%  Similarity=0.388  Sum_probs=58.9

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHH-HcCCC-CCccccccCcccCCHHHHHHHHHhccCCCCCc
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLE-THDNE-MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERG   80 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~-~h~~~-~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~   80 (111)
                      ....|+++++|.|.+|++.|.....|..|++ .|.++ ++|.|.+|++.|.....|..|++.+++ .+.|
T Consensus         6 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~-~~~p   74 (77)
T 2ct1_A            6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS-YSGP   74 (77)
T ss_dssp             CCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC-CSCC
T ss_pred             cccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC-CCCC
Confidence            4567899999999999999999999999997 68875 899999999999999999999998652 4444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=6.1e-15  Score=74.39  Aligned_cols=49  Identities=20%  Similarity=0.613  Sum_probs=26.0

Q ss_pred             CccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhc
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSS  100 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~  100 (111)
                      +|.|..|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHT--NEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT--SSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhC--CCCCccCCCCCCccCCHHHHHHHH
Confidence            4455555555555555555555554  455555555555555555555554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=1.5e-14  Score=79.23  Aligned_cols=63  Identities=14%  Similarity=0.287  Sum_probs=58.2

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHH-cCCCCC--------ccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLET-HDNEMD--------YSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      ...++|..|++.|.....|..|+++ |.++++        |.|..|++.|.....|..|++.|+  +++||.|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT--GEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHH--TCCCCSSC
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcC--CCCCCCCC
Confidence            3457899999999999999999998 998887        999999999999999999999998  89999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.7e-15  Score=76.41  Aligned_cols=59  Identities=20%  Similarity=0.458  Sum_probs=54.8

Q ss_pred             HcCCCCCcccc--ccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccC
Q psy370           44 THDNEMDYSCE--HCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        44 ~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ++.++++|.|.  .|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|+++|.
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHT--GQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC--CCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            47788999997  59999999999999999998  8999999999999999999999999873

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.53  E-value=9e-15  Score=79.26  Aligned_cols=62  Identities=23%  Similarity=0.549  Sum_probs=57.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCC
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEER   79 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~   79 (111)
                      .|+++++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+  +++
T Consensus        28 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~k   89 (90)
T 1a1h_A           28 IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHL--RQK   89 (90)
T ss_dssp             HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGG--C--
T ss_pred             HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhc--ccC
Confidence            46778999999999999999999999999999999999999999999999999999997  554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.5e-14  Score=72.07  Aligned_cols=54  Identities=26%  Similarity=0.610  Sum_probs=51.0

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHH-Hhcc
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHV-HSHL   74 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~-~~h~   74 (111)
                      ++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+ +.|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999999999999999997 5675

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=3.9e-14  Score=77.62  Aligned_cols=64  Identities=23%  Similarity=0.458  Sum_probs=59.3

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERG   80 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~   80 (111)
                      ..|.++++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|+  ++++
T Consensus        29 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~   92 (96)
T 2dmd_A           29 RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT--GDSG   92 (96)
T ss_dssp             GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCC--SCCC
T ss_pred             HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhc--CCCC
Confidence            357788999999999999999999999999999999999999999999999999999998  5554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.8e-14  Score=80.36  Aligned_cols=62  Identities=21%  Similarity=0.395  Sum_probs=54.1

Q ss_pred             cCCCCCccccccCcccCCHHHHHHHHH-hccC-CCCCceecCCCccccccchhHHhh-ccccCcc
Q psy370           45 HDNEMDYSCEHCDMQFNCKSDMRKHVH-SHLS-MEERGFVCEICGHVVDEMPVATQS-SKYPGQQ  106 (111)
Q Consensus        45 h~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~-~~~~~~~C~~C~~~~~~~~~l~~h-~~~~~~~  106 (111)
                      -+++++|.|..|++.|...+.|..|++ .|.+ .+++||.|..||+.|.....|..| +++|.++
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC
Confidence            457899999999999999999999998 4842 268999999999999999999999 6777654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.49  E-value=3.1e-14  Score=75.76  Aligned_cols=59  Identities=20%  Similarity=0.366  Sum_probs=56.0

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      .|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|...+.|..|++.|+
T Consensus        23 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A           23 IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            46778999999999999999999999999999999999999999999999999999886

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.47  E-value=3.1e-14  Score=77.10  Aligned_cols=56  Identities=20%  Similarity=0.495  Sum_probs=53.0

Q ss_pred             CCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCc
Q psy370           48 EMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        48 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +++|.|..|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|++.++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT--GEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH--CCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC--CCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            478999999999999999999999998  89999999999999999999999998874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.3e-13  Score=70.89  Aligned_cols=52  Identities=15%  Similarity=0.213  Sum_probs=25.6

Q ss_pred             CCCccccccCcccCCHHHHHHHHHhccCCCCCceecC-CCccccccchhHHhhcccc
Q psy370           48 EMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE-ICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        48 ~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~-~C~~~~~~~~~l~~h~~~~  103 (111)
                      +++|.|..|++.|. ...|..|++. .  +++||.|. .|++.|..+..|..|+++|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~--~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-C--PRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-C--SSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-c--CCcCccCCcccCcccccHHHHHHHHHhh
Confidence            34444444444444 4444445444 3  44555555 5555555555555555444

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.6e-13  Score=77.04  Aligned_cols=61  Identities=23%  Similarity=0.427  Sum_probs=56.8

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      .|+++++|.| .|++.|.....|..|++.|.  ++++|.|..|++.|.....|..|++.|+.+.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   64 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHL--GLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK   64 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHS--CCCSEECTTTSCEESSSHHHHHHHTTTCCCC
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcC--CCcCccCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            4788999999 89999999999999999998  7899999999999999999999999987653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.44  E-value=1.2e-13  Score=79.54  Aligned_cols=57  Identities=18%  Similarity=0.404  Sum_probs=54.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      .|+++++|.|.+|++.|.....|..|+++|  +++|.|..|++.|...+.|..|++.|+
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            378899999999999999999999999999  789999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.1e-13  Score=71.16  Aligned_cols=56  Identities=16%  Similarity=0.334  Sum_probs=53.0

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc-ccCcccCCHHHHHHHHHhcc
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE-HCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~-~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ..++++|.|..|++.|. ...|..|+++ +++++|.|. .|++.|...+.|..|++.|.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            56788999999999999 9999999999 999999999 99999999999999999886

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.4e-13  Score=76.92  Aligned_cols=62  Identities=19%  Similarity=0.298  Sum_probs=57.4

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHH-hccCCCCCceecC
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVH-SHLSMEERGFVCE   84 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~~C~   84 (111)
                      +++|.|.+|++.|.....|..|++ |.++++|.|.+|++.|.....|..|++ .|.  ++++|.|.
T Consensus        40 ~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~--~~~~~~~~  102 (107)
T 1wjp_A           40 RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN--QNNMAPTS  102 (107)
T ss_dssp             HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSC--CCCCCCCC
T ss_pred             CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcC--CCCCCCCC
Confidence            468999999999999999999996 999999999999999999999999997 787  88998774

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.43  E-value=2.4e-13  Score=67.25  Aligned_cols=48  Identities=17%  Similarity=0.269  Sum_probs=36.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHH-HcCCCCCccccccCcccCC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLE-THDNEMDYSCEHCDMQFNC   62 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c~~~f~~   62 (111)
                      .+++++++|.|.+|++.|.....|..|++ +|+++++|.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            35677778888888888888888888876 7777777888878777754

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.42  E-value=5.1e-13  Score=69.60  Aligned_cols=56  Identities=23%  Similarity=0.553  Sum_probs=34.1

Q ss_pred             ccccCcccCCC--cccccCCHHHHHHHHHHcCCCCCccccc--cCcccCCHHHHHHHHHh
Q psy370           17 YTIFVASQCPV--CKKIYTDQQLFQNHLETHDNEMDYSCEH--CDMQFNCKSDMRKHVHS   72 (111)
Q Consensus        17 ~~~~~~~~c~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~--c~~~f~~~~~l~~h~~~   72 (111)
                      .+..++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|++.
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            45556666665  6666666666666666666666666643  66666666666655543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.41  E-value=7.9e-13  Score=72.18  Aligned_cols=59  Identities=24%  Similarity=0.518  Sum_probs=55.0

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCC--CCccccccCcccCCHHHHHHHHH-hcc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE--MDYSCEHCDMQFNCKSDMRKHVH-SHL   74 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~--~~~~c~~c~~~f~~~~~l~~h~~-~h~   74 (111)
                      .|+++++|.|..|++.|.....|..|++.|.++  ++|.|.+|++.|.....|..|++ .|.
T Consensus        29 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           29 SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcC
Confidence            467889999999999999999999999999887  89999999999999999999986 675

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.40  E-value=5.2e-13  Score=69.57  Aligned_cols=57  Identities=18%  Similarity=0.392  Sum_probs=52.0

Q ss_pred             cCCCCCccccc--cCcccCCHHHHHHHHHhccCCCCCceecCC--CccccccchhHHhhcccc
Q psy370           45 HDNEMDYSCEH--CDMQFNCKSDMRKHVHSHLSMEERGFVCEI--CGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        45 h~~~~~~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~  103 (111)
                      ....++|.|..  |++.|.....|..|++.|.  ++++|.|..  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT--GEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHS--SSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcC--CCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34568899998  9999999999999999998  899999965  999999999999999875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.3e-15  Score=79.50  Aligned_cols=65  Identities=11%  Similarity=0.105  Sum_probs=55.7

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      ....|+++++|.|.+|++.|.....|..       +++|.|..|++.|.....|..|++.|.  ++++|.|..|
T Consensus         9 H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~~~C~~C   73 (73)
T 2ctu_A            9 RQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNES--GKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCC--CCCCSSCCCC
T ss_pred             HHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhc--CCCCCCCCCC
Confidence            3456888999999999999988876664       688999999999999999999999887  7889999887

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.39  E-value=4.6e-13  Score=72.26  Aligned_cols=59  Identities=19%  Similarity=0.417  Sum_probs=55.4

Q ss_pred             CCccccCcccCC--CcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhc
Q psy370           15 GSYTIFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH   73 (111)
Q Consensus        15 ~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h   73 (111)
                      ..|+++++|.|+  .|++.|.....|..|+++|.++++|.|..|++.|.....|..|++.|
T Consensus        28 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           28 RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            357889999997  69999999999999999999999999999999999999999999877

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.38  E-value=9.4e-13  Score=72.47  Aligned_cols=59  Identities=17%  Similarity=0.386  Sum_probs=55.4

Q ss_pred             CccccCcccCC--CcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           16 SYTIFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        16 ~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      .|.++++|.|.  .|++.|.....|..|+++|.++++|.|.+|++.|.....|..|++.|.
T Consensus        39 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           39 THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred             HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhC
Confidence            46778999996  699999999999999999999999999999999999999999999885

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5.2e-14  Score=79.61  Aligned_cols=69  Identities=7%  Similarity=0.097  Sum_probs=59.9

Q ss_pred             HHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHh--ccCCCCCce-ecCCCcccc--ccchhHHhhccccCccc
Q psy370           37 LFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHS--HLSMEERGF-VCEICGHVV--DEMPVATQSSKYPGQQN  107 (111)
Q Consensus        37 ~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~--h~~~~~~~~-~C~~C~~~~--~~~~~l~~h~~~~~~~~  107 (111)
                      .|..|+++|+++++|.|..|++.|.....|..|++.  |.  +++++ .|..|++.|  .....|..|+++|..+.
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~--~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHY--RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCC--BCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCcc--ccCCCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence            466788899999999999999999999999999998  65  56665 599999999  88899999999987543

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.37  E-value=7e-13  Score=63.01  Aligned_cols=43  Identities=19%  Similarity=0.335  Sum_probs=33.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCD   57 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~   57 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|..||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3577778888888888888888888888888887888887775

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.37  E-value=1.8e-13  Score=65.38  Aligned_cols=42  Identities=19%  Similarity=0.203  Sum_probs=27.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|++|++.|...+.|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            346666666666666666666666666666666666666654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.2e-13  Score=65.00  Aligned_cols=41  Identities=20%  Similarity=0.154  Sum_probs=26.8

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=7e-13  Score=70.12  Aligned_cols=59  Identities=17%  Similarity=0.452  Sum_probs=53.9

Q ss_pred             CCCCCccccc--cCcccCCHHHHHHHHH-hccCCCCCceecCC--CccccccchhHHhhccccCcc
Q psy370           46 DNEMDYSCEH--CDMQFNCKSDMRKHVH-SHLSMEERGFVCEI--CGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        46 ~~~~~~~c~~--c~~~f~~~~~l~~h~~-~h~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      +++++|.|..  |++.|.....|..|++ .|.  ++++|.|..  |++.|.....|..|+++|+.+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~--~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   66 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI--HQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT   66 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG--SCCCEECSCTTTCCEESSHHHHHHHHHHHHTS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC--CCCCeECCCCCCcCccCCHHHHHHHHHHhCCC
Confidence            4678999987  9999999999999999 687  799999999  999999999999999987754

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2e-13  Score=65.24  Aligned_cols=41  Identities=22%  Similarity=0.258  Sum_probs=26.0

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|...+.|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.8e-13  Score=64.79  Aligned_cols=41  Identities=17%  Similarity=0.250  Sum_probs=26.6

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.36  E-value=2e-13  Score=65.19  Aligned_cols=41  Identities=15%  Similarity=0.117  Sum_probs=24.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|...+.|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45556666666666666666666666666665566655544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.1e-13  Score=65.13  Aligned_cols=41  Identities=22%  Similarity=0.237  Sum_probs=25.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-13  Score=65.00  Aligned_cols=41  Identities=22%  Similarity=0.183  Sum_probs=25.2

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2e-13  Score=65.23  Aligned_cols=42  Identities=21%  Similarity=0.241  Sum_probs=27.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|+.|++.|...+.|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            346666666666666666666666666666666666666654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.7e-13  Score=64.71  Aligned_cols=41  Identities=22%  Similarity=0.174  Sum_probs=26.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=64.88  Aligned_cols=41  Identities=22%  Similarity=0.274  Sum_probs=25.0

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|...+.|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666544

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-13  Score=65.28  Aligned_cols=42  Identities=19%  Similarity=0.181  Sum_probs=28.5

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            346666677777777777777777777767766666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.6e-13  Score=64.82  Aligned_cols=41  Identities=20%  Similarity=0.233  Sum_probs=25.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-13  Score=64.88  Aligned_cols=41  Identities=20%  Similarity=0.139  Sum_probs=25.2

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.36  E-value=2.1e-13  Score=65.18  Aligned_cols=41  Identities=20%  Similarity=0.157  Sum_probs=23.0

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=64.82  Aligned_cols=41  Identities=20%  Similarity=0.207  Sum_probs=24.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666665556655544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.36  E-value=2.1e-14  Score=73.16  Aligned_cols=54  Identities=19%  Similarity=0.306  Sum_probs=35.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhh
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQS   99 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h   99 (111)
                      |+++|+++++|.|..|+..|.....|.   +.|.  +++||.|..|++.|.....+..+
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~--~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDP--MTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEET--TTTEEBCSSSCCBCEECTTCSCC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcC--CCCCEECCCCCCccccCcccccc
Confidence            455566666666766766666665554   5565  67777777777777766655433

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=64.87  Aligned_cols=42  Identities=19%  Similarity=0.203  Sum_probs=29.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|++|++.|.....|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777776655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.5e-13  Score=64.88  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=25.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.36  E-value=2.2e-13  Score=65.03  Aligned_cols=41  Identities=20%  Similarity=0.244  Sum_probs=24.8

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666665544

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.7e-13  Score=64.75  Aligned_cols=41  Identities=20%  Similarity=0.148  Sum_probs=26.5

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=65.21  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=26.6

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|...+.|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.9e-13  Score=65.33  Aligned_cols=41  Identities=20%  Similarity=0.159  Sum_probs=24.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45555666666666666666666666665655555555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.3e-12  Score=62.32  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTS--CCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.3e-13  Score=65.02  Aligned_cols=42  Identities=21%  Similarity=0.206  Sum_probs=27.4

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            345666666666666666666666666666666666666554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.3e-12  Score=62.23  Aligned_cols=44  Identities=16%  Similarity=0.175  Sum_probs=41.5

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHS--CCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6778999999999999999999999999999998  8999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.7e-12  Score=61.85  Aligned_cols=44  Identities=18%  Similarity=0.290  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|+  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT--AEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTT--CCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=64.49  Aligned_cols=41  Identities=17%  Similarity=0.104  Sum_probs=24.2

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555566666666666666666666666655555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=65.25  Aligned_cols=41  Identities=22%  Similarity=0.196  Sum_probs=25.6

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.1e-13  Score=65.12  Aligned_cols=41  Identities=20%  Similarity=0.159  Sum_probs=25.3

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=65.21  Aligned_cols=41  Identities=27%  Similarity=0.268  Sum_probs=24.5

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666566665544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.35  E-value=1.2e-12  Score=62.46  Aligned_cols=43  Identities=16%  Similarity=0.183  Sum_probs=29.6

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ...|+++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3456667777777777777777777777777777777776655

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-12  Score=61.96  Aligned_cols=44  Identities=20%  Similarity=0.232  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC--SSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.5e-13  Score=64.89  Aligned_cols=42  Identities=21%  Similarity=0.279  Sum_probs=27.5

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|..|++.|...+.|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            346666666666666666666666666666666666666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=9.1e-13  Score=65.11  Aligned_cols=47  Identities=19%  Similarity=0.410  Sum_probs=43.1

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHH-hccCCCCCceecCCCcccccc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVH-SHLSMEERGFVCEICGHVVDE   92 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~~C~~C~~~~~~   92 (111)
                      .++++++|.|.+|++.|.....|..|++ .|.  ++++|.|..|++.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~--~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT--SERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSC--CCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcC--CCCCccCCCCCCCCCC
Confidence            3678899999999999999999999997 888  8999999999999975

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.35  E-value=2e-12  Score=61.68  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHS--SCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=7.5e-13  Score=63.81  Aligned_cols=45  Identities=24%  Similarity=0.338  Sum_probs=35.1

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCc
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDM   58 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~   58 (111)
                      ...++++++|.|.+|++.|.....|..|+++|+++++|.|.+|++
T Consensus         4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            345677788888888888888888888888888888888887763

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.35  E-value=2.2e-13  Score=65.05  Aligned_cols=42  Identities=17%  Similarity=0.154  Sum_probs=27.2

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345666666666666666666666666666666666666554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=3.2e-13  Score=64.49  Aligned_cols=42  Identities=17%  Similarity=0.131  Sum_probs=27.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345666666666666666666666666666666666666654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.4e-13  Score=64.95  Aligned_cols=42  Identities=19%  Similarity=0.193  Sum_probs=26.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345666666666666666666666666666666666666554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.3e-12  Score=61.74  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=40.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  ++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA--EEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHT--SSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            4567899999999999999999999999999998  8999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.9e-13  Score=64.63  Aligned_cols=42  Identities=14%  Similarity=0.148  Sum_probs=28.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            356666667777777777776667667666666666666654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-12  Score=61.93  Aligned_cols=44  Identities=18%  Similarity=0.268  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT--GYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHT--CCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.4e-13  Score=64.93  Aligned_cols=42  Identities=19%  Similarity=0.219  Sum_probs=27.0

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|...+.|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345666666666666666666666666666666666666554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.3e-13  Score=64.42  Aligned_cols=41  Identities=17%  Similarity=0.161  Sum_probs=26.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.4e-13  Score=64.47  Aligned_cols=42  Identities=19%  Similarity=0.168  Sum_probs=26.9

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345666666666666666666666666666666666666554

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-12  Score=61.97  Aligned_cols=44  Identities=16%  Similarity=0.245  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS--GKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGS--SCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhc--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.34  E-value=2.8e-13  Score=64.64  Aligned_cols=41  Identities=20%  Similarity=0.136  Sum_probs=25.5

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.7e-13  Score=64.72  Aligned_cols=41  Identities=20%  Similarity=0.165  Sum_probs=25.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|...+.|..|+++|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666544

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.6e-13  Score=64.80  Aligned_cols=42  Identities=19%  Similarity=0.110  Sum_probs=28.3

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            346666677777777777777777777666666666666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.8e-13  Score=64.64  Aligned_cols=41  Identities=17%  Similarity=0.087  Sum_probs=25.7

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-12  Score=61.93  Aligned_cols=44  Identities=18%  Similarity=0.245  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT--GVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGS--CCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-12  Score=61.98  Aligned_cols=44  Identities=23%  Similarity=0.314  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS--GEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTC--CSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.33  E-value=1.4e-12  Score=62.18  Aligned_cols=44  Identities=20%  Similarity=0.244  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|+  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT--GVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSS--SCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.3e-13  Score=64.45  Aligned_cols=41  Identities=20%  Similarity=0.220  Sum_probs=23.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555566666666666666556666555555555555544

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.7e-12  Score=61.86  Aligned_cols=44  Identities=20%  Similarity=0.285  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHS--SSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.5e-12  Score=61.22  Aligned_cols=44  Identities=27%  Similarity=0.366  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT--GERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHS--CCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.33  E-value=4.3e-13  Score=64.05  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=40.7

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT--REKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGC--CSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            4667899999999999999999999999999998  8999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.33  E-value=1.6e-12  Score=61.97  Aligned_cols=44  Identities=25%  Similarity=0.355  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGS--SSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcC--CCCCcCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.5e-12  Score=62.08  Aligned_cols=44  Identities=20%  Similarity=0.278  Sum_probs=41.2

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTC--CCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.9e-12  Score=61.67  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHA--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHT--TSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.4e-12  Score=62.14  Aligned_cols=44  Identities=20%  Similarity=0.286  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTC--CCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.8e-12  Score=61.80  Aligned_cols=44  Identities=23%  Similarity=0.280  Sum_probs=41.2

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS--GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSC--CSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-12  Score=61.54  Aligned_cols=44  Identities=18%  Similarity=0.189  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT--GENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTT--TSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.6e-12  Score=61.98  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=41.2

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM--GEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGG--SCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.5e-12  Score=62.15  Aligned_cols=44  Identities=20%  Similarity=0.247  Sum_probs=41.1

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT--GQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHH--SCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5677899999999999999999999999999998  8999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.5e-12  Score=62.06  Aligned_cols=44  Identities=25%  Similarity=0.393  Sum_probs=41.2

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGT--TCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.8e-12  Score=61.81  Aligned_cols=44  Identities=16%  Similarity=0.223  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT--TCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.7e-12  Score=61.89  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTS--CSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3e-13  Score=64.58  Aligned_cols=42  Identities=19%  Similarity=0.252  Sum_probs=28.8

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            346666777777777777777777777777776677766655

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.9e-12  Score=61.68  Aligned_cols=44  Identities=20%  Similarity=0.309  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTT--TCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.8e-13  Score=64.70  Aligned_cols=41  Identities=22%  Similarity=0.172  Sum_probs=26.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45666666666666666666666666666666666666654

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2e-12  Score=61.66  Aligned_cols=44  Identities=23%  Similarity=0.289  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT--GEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTS--SCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.5e-12  Score=61.28  Aligned_cols=45  Identities=20%  Similarity=0.318  Sum_probs=41.7

Q ss_pred             HHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           40 NHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        40 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      .|+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT--KQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTS--CCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778999999999999999999999999999998  8999999986

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.3e-13  Score=64.02  Aligned_cols=40  Identities=25%  Similarity=0.272  Sum_probs=24.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEH   55 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   55 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4555666666666666666666666666666666665553

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.32  E-value=1.9e-12  Score=61.70  Aligned_cols=44  Identities=20%  Similarity=0.306  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGG--CCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.32  E-value=1.4e-12  Score=62.19  Aligned_cols=44  Identities=18%  Similarity=0.244  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS--CCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.9e-12  Score=61.71  Aligned_cols=44  Identities=23%  Similarity=0.312  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT--GEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHS--SCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.2e-13  Score=65.09  Aligned_cols=41  Identities=20%  Similarity=0.218  Sum_probs=23.7

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|..|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555556666666666655555555555555555555544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.6e-12  Score=61.16  Aligned_cols=44  Identities=18%  Similarity=0.299  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  ++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGC--CCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.7e-12  Score=61.88  Aligned_cols=44  Identities=18%  Similarity=0.247  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTS--CSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=2.2e-12  Score=61.50  Aligned_cols=44  Identities=14%  Similarity=0.139  Sum_probs=41.2

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHM--GQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHS--CCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=61.89  Aligned_cols=44  Identities=18%  Similarity=0.221  Sum_probs=41.5

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHH--CCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.8e-12  Score=61.30  Aligned_cols=42  Identities=19%  Similarity=0.169  Sum_probs=27.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHH-HcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLE-THDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|.....|..|++ +|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            35666666666666666666666666666 6666666666654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.8e-12  Score=61.86  Aligned_cols=42  Identities=19%  Similarity=0.105  Sum_probs=28.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|++|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            346666777777777777777777777777776667766655

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.9e-13  Score=63.72  Aligned_cols=44  Identities=16%  Similarity=0.214  Sum_probs=40.6

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHH-hccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVH-SHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++ .|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~--~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT--GEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT--TSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcC--CCCCCCCCCC
Confidence            5678899999999999999999999999999 898  8999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.7e-12  Score=61.89  Aligned_cols=44  Identities=20%  Similarity=0.382  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  ++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF--REKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHH--STTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHc--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.6e-13  Score=63.95  Aligned_cols=44  Identities=18%  Similarity=0.233  Sum_probs=40.7

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  ++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT--GEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHH--CCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHc--CCCCCCCCCC
Confidence            4567899999999999999999999999999998  8999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.4e-12  Score=61.32  Aligned_cols=44  Identities=20%  Similarity=0.286  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|+  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM--GEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTC--CSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.8e-12  Score=61.81  Aligned_cols=44  Identities=25%  Similarity=0.342  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT--GERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSC--SCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2e-12  Score=61.65  Aligned_cols=42  Identities=21%  Similarity=0.185  Sum_probs=31.0

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456777777777777777777777777777777777777665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.31  E-value=2.1e-12  Score=61.48  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS--GEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGT--SCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2e-12  Score=61.62  Aligned_cols=44  Identities=23%  Similarity=0.280  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHH--CSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-12  Score=61.44  Aligned_cols=44  Identities=18%  Similarity=0.280  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  ++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV--DDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCC--SCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.1e-12  Score=62.55  Aligned_cols=42  Identities=21%  Similarity=0.187  Sum_probs=29.8

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-13  Score=64.89  Aligned_cols=41  Identities=22%  Similarity=0.209  Sum_probs=23.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.4e-12  Score=61.35  Aligned_cols=45  Identities=20%  Similarity=0.326  Sum_probs=41.9

Q ss_pred             HHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           40 NHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        40 ~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      .|+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGS--CCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            36778999999999999999999999999999998  8999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.4e-13  Score=62.84  Aligned_cols=40  Identities=20%  Similarity=0.242  Sum_probs=26.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEH   55 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~   55 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4666666777777777776666666666666666666654

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.7e-12  Score=60.67  Aligned_cols=44  Identities=20%  Similarity=0.284  Sum_probs=41.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTT--TSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            6678999999999999999999999999999998  8999999875

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.6e-12  Score=61.98  Aligned_cols=44  Identities=18%  Similarity=0.270  Sum_probs=41.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT--GGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHH--SCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=6.4e-12  Score=59.84  Aligned_cols=44  Identities=16%  Similarity=0.270  Sum_probs=40.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHC--CCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999875

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=61.89  Aligned_cols=44  Identities=16%  Similarity=0.281  Sum_probs=41.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGS--SCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=4.1e-12  Score=60.26  Aligned_cols=42  Identities=33%  Similarity=0.503  Sum_probs=39.8

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICG   87 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~   87 (111)
                      +|+++++|.|.+|++.|.....|..|++.|+  ++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~--~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHD--GSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHS--CCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHcc--CCCCCCCcCCC
Confidence            5888999999999999999999999999998  89999999996

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=4.4e-12  Score=61.04  Aligned_cols=43  Identities=19%  Similarity=0.315  Sum_probs=39.8

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCcc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGH   88 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~   88 (111)
                      .+.++++|.|.+|++.|.....|..|++.|+  +++||.|..|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHS--GEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSC--SCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcC--CCCCccCCCCCC
Confidence            3667899999999999999999999999998  899999999986

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=1.9e-12  Score=60.47  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=23.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45566666666666666666666666666666666655

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=1e-11  Score=58.36  Aligned_cols=40  Identities=10%  Similarity=0.135  Sum_probs=31.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            3577788888888888888888888888888888887775

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3e-12  Score=59.75  Aligned_cols=38  Identities=18%  Similarity=0.294  Sum_probs=25.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45666666666666666666666666666666666655

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.24  E-value=3.8e-12  Score=67.90  Aligned_cols=54  Identities=20%  Similarity=0.428  Sum_probs=50.4

Q ss_pred             Cccc--cccCcccCCHHHHHHHHHhccCCCCCceecCC--CccccccchhHHhhccccCc
Q psy370           50 DYSC--EHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI--CGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        50 ~~~c--~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +|.|  ..|++.|.....|..|++.|.  ++++|.|..  |++.|.....|..|+++|+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT--QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH--TTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC--CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            5789  889999999999999999998  799999988  99999999999999998765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.5e-12  Score=61.33  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=39.7

Q ss_pred             HHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           42 LETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        42 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      +++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT--REKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH--HCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            356889999999999999999999999999998  8999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.2e-11  Score=58.87  Aligned_cols=41  Identities=20%  Similarity=0.216  Sum_probs=33.3

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ...|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            34577888888888888888888888888888888888875

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3e-12  Score=60.98  Aligned_cols=40  Identities=23%  Similarity=0.256  Sum_probs=26.0

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            3456666666666666666666666666666666666664

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=60.71  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=39.3

Q ss_pred             HHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           42 LETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        42 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      +++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT--GEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTS--SSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhC--CCCCCCCCCC
Confidence            356889999999999999999999999999998  8999999987

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.7e-12  Score=61.18  Aligned_cols=40  Identities=20%  Similarity=0.203  Sum_probs=26.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3466666666777777776666666666666666666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=60.61  Aligned_cols=40  Identities=20%  Similarity=0.209  Sum_probs=26.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3456666666666666666666666666666666666664

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.23  E-value=2.6e-12  Score=61.25  Aligned_cols=40  Identities=20%  Similarity=0.198  Sum_probs=27.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3466666777777777777777777777777666666664

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-11  Score=58.43  Aligned_cols=40  Identities=23%  Similarity=0.231  Sum_probs=28.8

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566777777777777777777777777777777777765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3e-12  Score=60.98  Aligned_cols=40  Identities=23%  Similarity=0.237  Sum_probs=26.5

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3466666666666666666666666666666666666664

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=60.67  Aligned_cols=40  Identities=18%  Similarity=0.245  Sum_probs=28.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566677777777777777777777777777777776664

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.6e-11  Score=58.39  Aligned_cols=43  Identities=21%  Similarity=0.293  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTT--TSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=60.65  Aligned_cols=40  Identities=23%  Similarity=0.273  Sum_probs=25.9

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3456666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.4e-12  Score=60.81  Aligned_cols=40  Identities=23%  Similarity=0.208  Sum_probs=26.5

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3456666666666666666666666666666666666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.4e-12  Score=60.82  Aligned_cols=40  Identities=20%  Similarity=0.216  Sum_probs=25.5

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            3456666666666666666666666666666666666654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.2e-12  Score=60.88  Aligned_cols=40  Identities=28%  Similarity=0.346  Sum_probs=27.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566667777777777777777777777777776776664

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.8e-12  Score=61.13  Aligned_cols=40  Identities=20%  Similarity=0.201  Sum_probs=26.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3466666666777777776666666666666666666664

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-11  Score=58.34  Aligned_cols=40  Identities=23%  Similarity=0.267  Sum_probs=27.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            3566677777777777777777777777777777776664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.1e-12  Score=60.88  Aligned_cols=40  Identities=23%  Similarity=0.223  Sum_probs=27.5

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            3566667777777777777777777777777766666664

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=60.77  Aligned_cols=43  Identities=21%  Similarity=0.304  Sum_probs=38.7

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTS--CSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcC--CCCCCCCCC
Confidence            5677899999999999999999999999999998  889999864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=60.70  Aligned_cols=40  Identities=23%  Similarity=0.240  Sum_probs=26.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3466666667777777776666666666666666666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.2e-11  Score=57.86  Aligned_cols=43  Identities=23%  Similarity=0.282  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT--GENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGS--SSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6678999999999999999999999999999998  899999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.22  E-value=1.6e-11  Score=58.45  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHT--TSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6678999999999999999999999999999998  899999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.6e-11  Score=58.44  Aligned_cols=43  Identities=23%  Similarity=0.296  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT--GEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHS--SSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.6e-12  Score=60.38  Aligned_cols=43  Identities=16%  Similarity=0.235  Sum_probs=39.2

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHT--SSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            5677899999999999999999999999999998  899999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.21  E-value=1.8e-11  Score=57.08  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=38.6

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  ++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHA--GESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGC--CCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcC--CCCCCCCC
Confidence            4567899999999999999999999999999998  89999884

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.2e-11  Score=57.44  Aligned_cols=39  Identities=15%  Similarity=0.167  Sum_probs=30.3

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      ..|+++++|.|++|++.|.....|..|+++|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            356777888888888888888888888888887777765

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.7e-12  Score=60.03  Aligned_cols=38  Identities=26%  Similarity=0.303  Sum_probs=24.7

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            6 SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            45666666666666666666666666666666666655

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.9e-11  Score=58.08  Aligned_cols=43  Identities=21%  Similarity=0.341  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS--GEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHC--CCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.7e-11  Score=58.32  Aligned_cols=43  Identities=23%  Similarity=0.300  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTS--CCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.3e-11  Score=58.76  Aligned_cols=40  Identities=23%  Similarity=0.236  Sum_probs=29.2

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            4567777777777777777777777777777777777765

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.3e-12  Score=60.79  Aligned_cols=39  Identities=23%  Similarity=0.252  Sum_probs=24.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            455666666666666666666666666666666666654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2e-11  Score=58.04  Aligned_cols=43  Identities=21%  Similarity=0.301  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|+  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT--GEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTS--SSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.8e-12  Score=60.62  Aligned_cols=40  Identities=20%  Similarity=0.196  Sum_probs=26.2

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3456666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.9e-11  Score=58.09  Aligned_cols=43  Identities=21%  Similarity=0.276  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT--GERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTS--CCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.1e-11  Score=58.00  Aligned_cols=43  Identities=19%  Similarity=0.305  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGC--CCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.2e-11  Score=57.88  Aligned_cols=43  Identities=21%  Similarity=0.347  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHC--CCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-11  Score=57.62  Aligned_cols=43  Identities=19%  Similarity=0.291  Sum_probs=39.7

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|+  ++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT--GERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCS--SCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=60.21  Aligned_cols=38  Identities=24%  Similarity=0.322  Sum_probs=23.3

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            6 SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            45566666666666666666666666666666665555

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2e-11  Score=58.03  Aligned_cols=43  Identities=23%  Similarity=0.364  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSC--SSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.5e-12  Score=59.73  Aligned_cols=38  Identities=26%  Similarity=0.292  Sum_probs=25.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|..|++.|.....|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            46666666666666666666666666666666666665

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=60.46  Aligned_cols=39  Identities=23%  Similarity=0.258  Sum_probs=26.8

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            466666777777777777777777777667666666664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=60.73  Aligned_cols=40  Identities=20%  Similarity=0.196  Sum_probs=27.0

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            3466666777777777777777777776666666666664

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.20  E-value=1.3e-12  Score=64.55  Aligned_cols=50  Identities=12%  Similarity=0.118  Sum_probs=29.6

Q ss_pred             cccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCce
Q psy370           30 KIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGF   81 (111)
Q Consensus        30 ~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~   81 (111)
                      +.|.....|..|+++|+++++|.|..|++.|...+.|..|++.|+  +++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRH--FAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHT--TTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhc--cCCCC
Confidence            344444455556666666666666666666666666666666665  55554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.2e-11  Score=58.59  Aligned_cols=40  Identities=20%  Similarity=0.218  Sum_probs=31.8

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4577788888888888888888888888888888887775

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.8e-11  Score=56.35  Aligned_cols=42  Identities=21%  Similarity=0.372  Sum_probs=38.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  ++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHT--VKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTS--CCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhC--CCCCCCCC
Confidence            4567899999999999999999999999999998  89999884

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4e-12  Score=60.63  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=37.5

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS--GERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTT--SCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcC--CCCCCCCCC
Confidence            4567888999999999999999999999999887  789998864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.9e-11  Score=58.10  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=39.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTS--SCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcC--CCCCcCCCC
Confidence            5678999999999999999999999999999998  899999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-11  Score=57.71  Aligned_cols=43  Identities=21%  Similarity=0.346  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT--GEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGT--TCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=60.34  Aligned_cols=40  Identities=20%  Similarity=0.227  Sum_probs=26.4

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|..|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3456666666666666666666666666666666666664

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2e-11  Score=58.52  Aligned_cols=42  Identities=14%  Similarity=0.083  Sum_probs=31.7

Q ss_pred             CCccccCcccCC--CcccccCCHHHHHHHHHHcCCCCCcccccc
Q psy370           15 GSYTIFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDYSCEHC   56 (111)
Q Consensus        15 ~~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c   56 (111)
                      ..|+++++|.|.  .|++.|.....|..|+++|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456777777776  788888777777777777777777777665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.19  E-value=2.6e-11  Score=56.45  Aligned_cols=39  Identities=21%  Similarity=0.185  Sum_probs=28.4

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      ..|+++++|.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            356677777777777777777777777777777777665

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.1e-12  Score=60.53  Aligned_cols=40  Identities=25%  Similarity=0.257  Sum_probs=27.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566677777777777777777777777777776666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3e-11  Score=57.42  Aligned_cols=43  Identities=23%  Similarity=0.289  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  ++++|.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR--GEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGC--SCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.4e-14  Score=75.51  Aligned_cols=62  Identities=13%  Similarity=0.274  Sum_probs=53.9

Q ss_pred             HHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           37 LFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        37 ~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      .|..|+++|.++++|.|..|++.|.....|..         +++|.|..|++.|.....|..|+++|+.+.
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~   66 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESGKK   66 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcCCC
Confidence            45678888999999999999999988777664         578999999999999999999999987653

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.5e-11  Score=57.09  Aligned_cols=42  Identities=24%  Similarity=0.370  Sum_probs=39.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT--GESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTC--CSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcC--CCCCCCCC
Confidence            5678999999999999999999999999999998  89999884

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.19  E-value=1.6e-11  Score=66.91  Aligned_cols=57  Identities=14%  Similarity=0.207  Sum_probs=50.5

Q ss_pred             CCccccccCcccCCHHHHHHHHHh-ccCCCCCc--------eecCCCccccccchhHHhhccccCccc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHS-HLSMEERG--------FVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~-h~~~~~~~--------~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      ..+.|..|++.|.....|..|++. |.  ++++        |.|..|++.|.....|..|+++|..+.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~--~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   89 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHV--GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK   89 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTT--CCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhcc--CCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence            456899999999999999999998 76  6776        899999999999999999999876543

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.9e-11  Score=56.83  Aligned_cols=42  Identities=29%  Similarity=0.489  Sum_probs=39.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT--GESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTT--TSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhC--CCCCCCCC
Confidence            6678999999999999999999999999999998  89999884

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.3e-12  Score=60.46  Aligned_cols=40  Identities=23%  Similarity=0.248  Sum_probs=29.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3567777777777777777777777777777777777765

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.6e-11  Score=57.66  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTC--CSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6678999999999999999999999999999998  899999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.6e-11  Score=57.65  Aligned_cols=43  Identities=21%  Similarity=0.308  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|+  ++++|.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT--QETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHS--SCCSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6678999999999999999999999999999998  899999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.2e-11  Score=57.37  Aligned_cols=43  Identities=28%  Similarity=0.370  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT--GERHSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHT--CCCBTTTBC
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcC--CCCCCCCCC
Confidence            6678999999999999999999999999999998  899999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.8e-11  Score=57.50  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTS--SCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.4e-12  Score=60.12  Aligned_cols=39  Identities=21%  Similarity=0.224  Sum_probs=24.0

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            6 SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666666666666666666666666666666666554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=3.5e-11  Score=56.69  Aligned_cols=39  Identities=28%  Similarity=0.411  Sum_probs=27.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            346667777777777777777777777777777777666

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=5.7e-12  Score=59.43  Aligned_cols=38  Identities=21%  Similarity=0.337  Sum_probs=24.8

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            45666666666666666666666666666666666655

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.4e-11  Score=57.69  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=40.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT--GEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHH--SCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcC--CCCCCCCCC
Confidence            6678999999999999999999999999999998  899999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.5e-11  Score=57.10  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=39.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  ++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS--GQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSS--SSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcC--CCCCCCCC
Confidence            5678999999999999999999999999999998  89999884

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.17  E-value=7e-12  Score=58.47  Aligned_cols=41  Identities=17%  Similarity=0.291  Sum_probs=34.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~--~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS--QSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTT--CCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcC--CCCCCCC
Confidence            3456788888888888888888888888888887  7888876

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.3e-12  Score=59.22  Aligned_cols=38  Identities=18%  Similarity=0.219  Sum_probs=22.5

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|++|++.|...+.|..|+++|+++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45555666666666666666666666666665555544

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.5e-11  Score=56.60  Aligned_cols=38  Identities=21%  Similarity=0.260  Sum_probs=27.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            46667777777777777777777777777777776665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.9e-12  Score=59.75  Aligned_cols=40  Identities=23%  Similarity=0.329  Sum_probs=26.6

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3466666677777777776666666666666666666664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.1e-12  Score=59.62  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=27.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      ..|+++++|.|+.|++.|.....|..|+++|+++++|.|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566666777777777777777777777666666666664

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.4e-11  Score=57.82  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=39.3

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSC--CSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            4567899999999999999999999999999998  899999964

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.16  E-value=5.2e-12  Score=64.12  Aligned_cols=51  Identities=20%  Similarity=0.333  Sum_probs=44.0

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHH
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDM   66 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l   66 (111)
                      ....|+++++|.|+.||+.|.....|.   ++|+++++|.|..|+..|....++
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            345689999999999999999988776   789999999999999999776543

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.1e-11  Score=58.51  Aligned_cols=42  Identities=19%  Similarity=0.255  Sum_probs=37.4

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHA--GESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHT--TSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHC--CCCCCCCC
Confidence            4567888999999999999999999999999998  89999884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=5.3e-12  Score=58.98  Aligned_cols=41  Identities=20%  Similarity=0.374  Sum_probs=28.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT--GSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTS--CCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcC--CCCCCCC
Confidence            3455677777777777777777777777777776  6677665

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=5.8e-12  Score=60.02  Aligned_cols=39  Identities=15%  Similarity=0.215  Sum_probs=24.0

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCC-CCCcccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDN-EMDYSCE   54 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~-~~~~~c~   54 (111)
                      .|+++++|.|.+|++.|.....|..|+++|++ +++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45566666666666666666666666666666 5666553

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.8e-11  Score=56.99  Aligned_cols=43  Identities=19%  Similarity=0.331  Sum_probs=39.7

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT--GKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSC--CCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999964

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.3e-12  Score=59.24  Aligned_cols=38  Identities=16%  Similarity=0.162  Sum_probs=24.3

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45666666666666666666666666666666666554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=3.6e-11  Score=56.60  Aligned_cols=42  Identities=19%  Similarity=0.388  Sum_probs=38.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  ++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA--RKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCC--CCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcC--CCCCCCCC
Confidence            5678999999999999999999999999999998  89999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=3.5e-11  Score=56.63  Aligned_cols=39  Identities=18%  Similarity=0.261  Sum_probs=28.3

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            356677777777777777777777777777777777766

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2e-11  Score=56.88  Aligned_cols=41  Identities=24%  Similarity=0.375  Sum_probs=37.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  +++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT--GSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHH--SCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcC--CCCCCCC
Confidence            4567899999999999999999999999999998  8999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.3e-11  Score=56.68  Aligned_cols=41  Identities=20%  Similarity=0.374  Sum_probs=38.1

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|.  +++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT--GSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTS--CCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhC--CCCCCCC
Confidence            5678999999999999999999999999999998  8999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=6.4e-12  Score=59.26  Aligned_cols=42  Identities=19%  Similarity=0.439  Sum_probs=34.0

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|..|++.|...+.|..|++.|.  +++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHA--AKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGC--CCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcC--CCCCcCCC
Confidence            5567788888888888888888888888888887  78888774

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.6e-11  Score=57.65  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=39.8

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  ++++|.|..
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS--REKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHH--HTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            5678999999999999999999999999999998  899999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.8e-12  Score=59.97  Aligned_cols=38  Identities=21%  Similarity=0.141  Sum_probs=20.3

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            34555555555555555555555555555555555554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.9e-12  Score=67.55  Aligned_cols=64  Identities=22%  Similarity=0.350  Sum_probs=42.1

Q ss_pred             HHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           38 FQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        38 l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      |..|++++.+++++.|..|+..|. ...|..|+ .+.  +++++.|..|++.|. +..|..|++.++.+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c--~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYC--GARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHH--HHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHc--CCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            344555566667777777777763 66777777 565  677777777777665 35677777666544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.7e-11  Score=57.79  Aligned_cols=38  Identities=24%  Similarity=0.197  Sum_probs=22.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|...+.|..|+++|+++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            45556666666666666666666666666666555543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.6e-12  Score=59.46  Aligned_cols=38  Identities=24%  Similarity=0.242  Sum_probs=22.9

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45556666666666666666666666666666555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.1e-11  Score=56.97  Aligned_cols=43  Identities=16%  Similarity=0.360  Sum_probs=39.5

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCC-CCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSME-ERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~-~~~~~C~~   85 (111)
                      |+++|+++++|.|..|++.|.....|..|++.|.  + ++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHT--RGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCC--SCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence            5678999999999999999999999999999998  8 99999863

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.6e-11  Score=58.81  Aligned_cols=43  Identities=16%  Similarity=0.286  Sum_probs=39.0

Q ss_pred             HHHcCCCCCcccc--ccCcccCCHHHHHHHHHhccCCCCCceecCCC
Q psy370           42 LETHDNEMDYSCE--HCDMQFNCKSDMRKHVHSHLSMEERGFVCEIC   86 (111)
Q Consensus        42 ~~~h~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C   86 (111)
                      .++|+++++|.|.  .|++.|.....|..|++.|.  +++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS--GVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC--CCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC--CCCCCCCCCC
Confidence            3568899999998  89999999999999999998  8999999887

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=1.8e-10  Score=59.28  Aligned_cols=44  Identities=20%  Similarity=0.370  Sum_probs=37.2

Q ss_pred             CCCCccccCcccCCC--cccccCCHHHHHHHH-HHcCCCCCcccccc
Q psy370           13 IPGSYTIFVASQCPV--CKKIYTDQQLFQNHL-ETHDNEMDYSCEHC   56 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~--C~~~f~~~~~l~~h~-~~h~~~~~~~c~~c   56 (111)
                      .+...++++||.|..  |+++|...+.|..|+ ++|++++|+.|..-
T Consensus        18 ~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           18 FPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             CSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             ccccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            455678999999965  999999999999997 68999999988653

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=5.4e-11  Score=55.81  Aligned_cols=41  Identities=12%  Similarity=0.340  Sum_probs=36.9

Q ss_pred             HHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           43 ETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        43 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      ++|+++++|.|..|++.|.....|..|++.|+  +++||.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTH--SDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHT--CTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhC--CCCCccCCC
Confidence            35788999999999999999999999999998  899999863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.11  E-value=6.6e-11  Score=54.26  Aligned_cols=37  Identities=16%  Similarity=0.294  Sum_probs=28.4

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccc
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSC   53 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c   53 (111)
                      |+++++|.|.+|++.|...+.|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4667788888888888888888888888887777765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.8e-11  Score=55.12  Aligned_cols=42  Identities=24%  Similarity=0.330  Sum_probs=38.5

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|.+|++.|...+.|..|++.|+  +++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA--GVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGS--SCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhc--CCCCCCCC
Confidence            5678999999999999999999999999999998  89998763

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.2e-11  Score=56.97  Aligned_cols=42  Identities=19%  Similarity=0.184  Sum_probs=37.7

Q ss_pred             HHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           42 LETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        42 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      +++|+++++|.|..|++.|.....|..|++.|.  +++||.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT--GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS--SCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhC--CCCCCCCCC
Confidence            356888999999999999999999999999998  899999963

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=57.11  Aligned_cols=43  Identities=21%  Similarity=0.345  Sum_probs=39.7

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~~   45 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE--RTDPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHH--HSCCSSCSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhC--CCCCCCCCC
Confidence            6678999999999999999999999999999998  899999963

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4e-11  Score=56.44  Aligned_cols=42  Identities=17%  Similarity=0.361  Sum_probs=38.9

Q ss_pred             HHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        41 h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      |+++|+++++|.|.+|++.|.....|..|++.|.  +++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT--RKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHC--CCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhC--CCCCCCCC
Confidence            5678999999999999999999999999999998  89999884

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=6.3e-11  Score=54.90  Aligned_cols=38  Identities=18%  Similarity=0.324  Sum_probs=28.4

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      +|+++++|.|..|++.|.....|..|++.|+  +++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHT--GSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCC--CCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhC--CCCCcCC
Confidence            4667777777777777777777777777776  6777765

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.7e-11  Score=55.37  Aligned_cols=40  Identities=20%  Similarity=0.460  Sum_probs=35.0

Q ss_pred             HHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecC
Q psy370           43 ETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCE   84 (111)
Q Consensus        43 ~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~   84 (111)
                      ++|+++++|.|.+|++.|.....|..|++.|.  ++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT--GEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTS--SCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhC--CCCCCCCC
Confidence            46788899999999999999999999999887  78899886

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.01  E-value=3.2e-11  Score=59.38  Aligned_cols=47  Identities=13%  Similarity=0.111  Sum_probs=41.6

Q ss_pred             cccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           58 MQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        58 ~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      +.|.....+..|++.|.  ++++|.|..|++.|.....|..|+++|.++
T Consensus         4 k~~~~~~~l~~h~~~H~--~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQ--SEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCCSCSSCCCCCHHHHT--SSCCEECTTTCCEESSHHHHHHHHHHHTTT
T ss_pred             cccCCCcchhhHHHhcC--CCCCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            45777778888999998  899999999999999999999999987754

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=3.7e-10  Score=50.94  Aligned_cols=35  Identities=29%  Similarity=0.617  Sum_probs=26.7

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCCCC
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMD   50 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~   50 (111)
                      .|+++++|.|..|++.|.....|..|+++|+++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            56777788888888888888888888877776653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=5.5e-10  Score=51.19  Aligned_cols=34  Identities=26%  Similarity=0.400  Sum_probs=29.3

Q ss_pred             CCccccCcccCCC--cccccCCHHHHHHHHHHcCCC
Q psy370           15 GSYTIFVASQCPV--CKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        15 ~~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      +++++++||.|++  |++.|...+.|..|+++|+++
T Consensus         2 ~~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            2 SSGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4678899999986  999999999999999998875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.98  E-value=5.4e-10  Score=49.77  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=24.2

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCC
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      |+++++|.|.+|++.|...+.|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            566777777777777777777777777776654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.96  E-value=7.8e-10  Score=49.14  Aligned_cols=33  Identities=12%  Similarity=0.262  Sum_probs=24.4

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCC
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      |+++++|.|..|++.|.....|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            566777777777777777777777777777654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.1e-09  Score=49.04  Aligned_cols=34  Identities=18%  Similarity=0.338  Sum_probs=28.1

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      .+|+++++|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4678888888888888888888888888888765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=9.8e-10  Score=49.15  Aligned_cols=34  Identities=24%  Similarity=0.313  Sum_probs=27.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      .+|+++++|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            4677888888888888888888888888888765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=5.6e-11  Score=64.46  Aligned_cols=57  Identities=14%  Similarity=0.231  Sum_probs=38.1

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ...|+++++|.|.+|++.|.....|..|+++|+++++|.|..|.+    ...+..|++.|.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~   73 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYAD   73 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhcccc
Confidence            345777778888888888888777877877777777777765542    333344555554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.7e-09  Score=48.32  Aligned_cols=34  Identities=18%  Similarity=0.311  Sum_probs=27.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ..|+++++|.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            4577888888888888888888888888888765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.92  E-value=2.8e-10  Score=51.39  Aligned_cols=34  Identities=12%  Similarity=0.105  Sum_probs=20.4

Q ss_pred             HHhccCCCCCceecCCCccccccchhHHhhccccCc
Q psy370           70 VHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        70 ~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ++.|.  +++||.|..|++.|.....|..|++.|.+
T Consensus         3 ~~~h~--~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            3 TRGST--GIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSTTC--CSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCcCC--CCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            34454  56666666666666666666666665543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.2e-09  Score=48.96  Aligned_cols=34  Identities=15%  Similarity=0.359  Sum_probs=27.2

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      .+|+++++|.|.+|++.|...+.|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3577788888888888888888888888887764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.90  E-value=1.1e-09  Score=50.04  Aligned_cols=37  Identities=19%  Similarity=0.435  Sum_probs=25.3

Q ss_pred             cCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceec
Q psy370           45 HDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVC   83 (111)
Q Consensus        45 h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C   83 (111)
                      |+++++|.|.+|++.|...+.|..|++.|.  +++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHR--RDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTC--CSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcC--CCcccee
Confidence            355667777777777777777777777776  6666644

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2e-09  Score=48.20  Aligned_cols=34  Identities=29%  Similarity=0.444  Sum_probs=27.8

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      .+++++++|.|+.|++.|.....|..|+++|+++
T Consensus         2 s~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            2 SSGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CTTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4567788888888888888888888888888765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.87  E-value=2.4e-09  Score=47.20  Aligned_cols=32  Identities=19%  Similarity=0.391  Sum_probs=22.2

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCCCcc
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEMDYS   52 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~   52 (111)
                      ++|.|.+|++.|...+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35677777777777777777777777766653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.85  E-value=4e-09  Score=47.39  Aligned_cols=32  Identities=22%  Similarity=0.358  Sum_probs=20.8

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCC
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      .|+++++|.|+.|++.|.....|..|+++|++
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45666666666666666666666666666654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.85  E-value=1.8e-09  Score=48.85  Aligned_cols=27  Identities=15%  Similarity=0.239  Sum_probs=23.5

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHH
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHL   42 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~   42 (111)
                      +.++++||.|++||++|...+.|..|+
T Consensus         2 ~~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            2 SLLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CSSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCCccCeECCCCCCccCCHhHccCcC
Confidence            567888999999999999999999887

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=2.2e-09  Score=48.62  Aligned_cols=35  Identities=14%  Similarity=0.328  Sum_probs=24.7

Q ss_pred             ccccCcccCC--CcccccCCHHHHHHHHHHcCCCCCc
Q psy370           17 YTIFVASQCP--VCKKIYTDQQLFQNHLETHDNEMDY   51 (111)
Q Consensus        17 ~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~~~   51 (111)
                      |+++++|.|.  .|++.|...+.|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4566777777  4777777777777777777766654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.6e-09  Score=48.78  Aligned_cols=31  Identities=19%  Similarity=0.522  Sum_probs=18.5

Q ss_pred             HcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        44 ~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +|+++++|.|..|++.|...+.|..|++.|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            3555566666666666666666666666555

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.1e-09  Score=48.40  Aligned_cols=33  Identities=24%  Similarity=0.389  Sum_probs=23.9

Q ss_pred             CccccCcccCCCcccccCCH-HHHHHHHHHcCCC
Q psy370           16 SYTIFVASQCPVCKKIYTDQ-QLFQNHLETHDNE   48 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~-~~l~~h~~~h~~~   48 (111)
                      .|+++++|.|..|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46677777777777777777 7777777777654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.4e-09  Score=57.08  Aligned_cols=59  Identities=12%  Similarity=0.145  Sum_probs=52.4

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ....+.+++++.|..|++.|. ...|..|+ .+.+++++.|..|+..|. ...|..|++.+.
T Consensus         8 H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A            8 HEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBT
T ss_pred             hCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHcc
Confidence            344689999999999999995 88999999 889999999999999877 489999999887

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=9.8e-10  Score=59.51  Aligned_cols=59  Identities=19%  Similarity=0.308  Sum_probs=50.1

Q ss_pred             HHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           42 LETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        42 ~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      .++|+++++|.|.+|++.|.....|..|++.|+  +++||.|..|.    .+..|..|.+++...
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht--~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN--EEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHH--HHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC--CCCCcccchhh----hHHHHHhhhcccccc
Confidence            456889999999999999999999999999998  89999997654    466677788877653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=5e-09  Score=47.26  Aligned_cols=33  Identities=18%  Similarity=0.251  Sum_probs=26.3

Q ss_pred             CccccCcccCCCcccccCCHHHHHHH-HHHcCCC
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNH-LETHDNE   48 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h-~~~h~~~   48 (111)
                      .|+++++|.|..|++.|...+.|..| ++.|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            57788888888888888888888888 7777653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=7.2e-09  Score=53.34  Aligned_cols=39  Identities=18%  Similarity=0.271  Sum_probs=34.0

Q ss_pred             cCCCCCccccc--cCcccCCHHHHHHHH-HhccCCCCCceecCC
Q psy370           45 HDNEMDYSCEH--CDMQFNCKSDMRKHV-HSHLSMEERGFVCEI   85 (111)
Q Consensus        45 h~~~~~~~c~~--c~~~f~~~~~l~~h~-~~h~~~~~~~~~C~~   85 (111)
                      .++++||.|..  |+++|...++|..|+ +.|+  +++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT--gEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK--SDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS--SCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCC--CCCCccccc
Confidence            46789999975  999999999999997 6898  899998864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.76  E-value=7.4e-09  Score=45.89  Aligned_cols=28  Identities=25%  Similarity=0.402  Sum_probs=15.8

Q ss_pred             CCCceecCCCccccccchhHHhhccccC
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ++++|.|..|++.|.....|..|++.|.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            4555555555555555555555555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.75  E-value=8.2e-09  Score=45.67  Aligned_cols=29  Identities=14%  Similarity=0.216  Sum_probs=15.6

Q ss_pred             CCCceecCCCccccccchhHHhhccccCc
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ++++|.|..|++.|.....|..|+++|+.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            45555555555555555555555555443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.74  E-value=6.4e-09  Score=49.78  Aligned_cols=33  Identities=21%  Similarity=0.311  Sum_probs=23.3

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHH-HcCCCC
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLE-THDNEM   49 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~-~h~~~~   49 (111)
                      |+++++|.|.+|++.|.....|..|++ +|+++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            567777777777777777777777777 676653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=3.2e-09  Score=47.91  Aligned_cols=28  Identities=7%  Similarity=0.076  Sum_probs=19.0

Q ss_pred             CCCceecCCCccccccchhHHhh-ccccC
Q psy370           77 EERGFVCEICGHVVDEMPVATQS-SKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h-~~~~~  104 (111)
                      +++||.|..|++.|.....|..| ++.|.
T Consensus         6 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            6 SGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            56677777777777777777777 55554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=6.1e-09  Score=47.62  Aligned_cols=29  Identities=10%  Similarity=0.043  Sum_probs=18.7

Q ss_pred             CCCceecCC--CccccccchhHHhhccccCc
Q psy370           77 EERGFVCEI--CGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        77 ~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +++||.|..  |++.|...+.|..|+++|..
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            566666654  66666666666666666554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=4.2e-08  Score=50.23  Aligned_cols=42  Identities=19%  Similarity=0.266  Sum_probs=33.0

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCD   57 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~   57 (111)
                      ..++++++|.|.+|++.|.....|..|+++|+++.. .+.+++
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~-~~~~~~   47 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL-QLGYID   47 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC-CCCSCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc-cccccc
Confidence            447788999999999999999999999999987533 444443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.69  E-value=8.5e-09  Score=49.33  Aligned_cols=30  Identities=27%  Similarity=0.697  Sum_probs=18.0

Q ss_pred             cCCCCCccccccCcccCCHHHHHHHHH-hcc
Q psy370           45 HDNEMDYSCEHCDMQFNCKSDMRKHVH-SHL   74 (111)
Q Consensus        45 h~~~~~~~c~~c~~~f~~~~~l~~h~~-~h~   74 (111)
                      |+++++|.|.+|++.|.....|..|++ .|.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            455566666666666666666666665 554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.68  E-value=1.3e-08  Score=45.79  Aligned_cols=32  Identities=25%  Similarity=0.374  Sum_probs=24.2

Q ss_pred             ccccCcccCC--CcccccCCHHHHHHHHHHcCCC
Q psy370           17 YTIFVASQCP--VCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        17 ~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      |+++++|.|.  .|++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5677788887  4888888888888887777664

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=9.8e-09  Score=45.82  Aligned_cols=29  Identities=14%  Similarity=0.201  Sum_probs=21.0

Q ss_pred             CCCceecCCCccccccchhHHhhccccCc
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +++||.|..|++.|.....|..|+++|..
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            56777777777777777777777777654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.67  E-value=2.3e-08  Score=43.91  Aligned_cols=32  Identities=19%  Similarity=0.364  Sum_probs=25.2

Q ss_pred             CCccccccCcccCCHHHHHHHHHhccCCCCCcee
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFV   82 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~   82 (111)
                      ++|.|.+|++.|...+.|..|++.|+  ++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~--~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE--LLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT--TTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC--CCCCCC
Confidence            46788888888888888888888887  677763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.61  E-value=3.5e-08  Score=41.79  Aligned_cols=29  Identities=34%  Similarity=0.655  Sum_probs=20.2

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      +++|.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35677777777777777777777776654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=3.2e-08  Score=44.63  Aligned_cols=35  Identities=20%  Similarity=0.483  Sum_probs=20.6

Q ss_pred             cCCCCCcccc--ccCcccCCHHHHHHHHHhccCCCCCce
Q psy370           45 HDNEMDYSCE--HCDMQFNCKSDMRKHVHSHLSMEERGF   81 (111)
Q Consensus        45 h~~~~~~~c~--~c~~~f~~~~~l~~h~~~h~~~~~~~~   81 (111)
                      |+++++|.|.  .|++.|...+.|..|++.|.  ++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE--MTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHH--TTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhC--CCCCC
Confidence            3455666666  36666666666666666665  45544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=4.5e-08  Score=43.48  Aligned_cols=28  Identities=7%  Similarity=0.114  Sum_probs=15.1

Q ss_pred             CCCceecCCCccccccchhHHhhccccC
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ++++|.|..|++.|.....|..|+++|.
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            4555555555555555555555555443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.59  E-value=2e-08  Score=41.95  Aligned_cols=26  Identities=8%  Similarity=0.230  Sum_probs=20.4

Q ss_pred             CCceecCCCccccccchhHHhhcccc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      ++||.|..|++.|.....|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            36788888888888888888887765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.58  E-value=3.3e-08  Score=41.42  Aligned_cols=27  Identities=15%  Similarity=0.335  Sum_probs=20.8

Q ss_pred             CCceecCCCccccccchhHHhhccccC
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ++||.|..|++.|.....|..|++.|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            357888888888888888888877764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.57  E-value=7.1e-08  Score=40.53  Aligned_cols=28  Identities=29%  Similarity=0.663  Sum_probs=19.3

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3567777777777777777777776654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=5.8e-08  Score=43.18  Aligned_cols=28  Identities=11%  Similarity=0.252  Sum_probs=16.7

Q ss_pred             CCCceecCCCccccccchhHHhhccccC
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      +++||.|..|++.|.....|..|++.|.
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            4556666666666666666666665554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.57  E-value=1.5e-08  Score=45.74  Aligned_cols=25  Identities=16%  Similarity=0.357  Sum_probs=16.5

Q ss_pred             CCCceecCCCccccccchhHHhhcc
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSK  101 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~  101 (111)
                      +++||.|..||+.|...+.|..|+.
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcCC
Confidence            5666666666666666666666663

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.57  E-value=2.3e-08  Score=41.62  Aligned_cols=26  Identities=19%  Similarity=0.494  Sum_probs=18.5

Q ss_pred             CCceecCCCccccccchhHHhhcccc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      ++||.|..|++.|.....|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35677777777777777777777655

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=7.5e-08  Score=42.72  Aligned_cols=30  Identities=20%  Similarity=0.448  Sum_probs=15.5

Q ss_pred             cCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           45 HDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        45 h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      |+++++|.|.+|++.|.....|..|++.|+
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            344455555555555555555555555544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3.1e-08  Score=44.36  Aligned_cols=28  Identities=11%  Similarity=0.115  Sum_probs=16.8

Q ss_pred             CCCceecCCCccccccc-hhHHhhccccC
Q psy370           77 EERGFVCEICGHVVDEM-PVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~-~~l~~h~~~~~  104 (111)
                      ++++|.|..|++.|... ..|..|+++|.
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            45566666666666665 56666665543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.54  E-value=1.8e-09  Score=47.19  Aligned_cols=31  Identities=23%  Similarity=0.432  Sum_probs=19.9

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCCCc
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEMDY   51 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~   51 (111)
                      ++|.|.+|++.|...+.|..|+++|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3566666666666666666666666666554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.54  E-value=6.8e-08  Score=40.10  Aligned_cols=27  Identities=26%  Similarity=0.448  Sum_probs=19.0

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcC
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      +++|.|..||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            356777777777777777777776653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.53  E-value=4.8e-08  Score=41.35  Aligned_cols=27  Identities=11%  Similarity=0.401  Sum_probs=17.7

Q ss_pred             CceecCCCccccccchhHHhhccccCc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +||.|..|++.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            566666677666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.53  E-value=5.8e-08  Score=40.60  Aligned_cols=27  Identities=22%  Similarity=0.551  Sum_probs=19.0

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcC
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      +++|.|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            356777777777777777777776664

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.52  E-value=4.5e-08  Score=41.22  Aligned_cols=28  Identities=25%  Similarity=0.539  Sum_probs=17.7

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ++|.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.51  E-value=6.8e-08  Score=40.65  Aligned_cols=27  Identities=15%  Similarity=0.111  Sum_probs=19.8

Q ss_pred             CceecCCCccccccchhHHhhccccCc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            467777777777777777777777654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=6.5e-08  Score=40.60  Aligned_cols=28  Identities=29%  Similarity=0.533  Sum_probs=18.5

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3566777777777777777776666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=1.2e-07  Score=42.12  Aligned_cols=28  Identities=18%  Similarity=0.290  Sum_probs=16.0

Q ss_pred             CCCceecCCCccccccchhHHhhccccC
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ++++|.|..|++.|.....|..|+++|.
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            4555555556655555555555555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.49  E-value=9.1e-08  Score=41.32  Aligned_cols=28  Identities=18%  Similarity=0.444  Sum_probs=18.3

Q ss_pred             CcccCC--CcccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCP--VCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~--~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ++|.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            466666  6666666666666666666654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.49  E-value=5.7e-08  Score=40.47  Aligned_cols=26  Identities=23%  Similarity=0.542  Sum_probs=18.4

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHc
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      +++|.|+.||+.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35677777777777777777777665

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.49  E-value=1.3e-07  Score=40.59  Aligned_cols=28  Identities=32%  Similarity=0.520  Sum_probs=19.2

Q ss_pred             CcccCC--CcccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCP--VCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~--~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ++|.|.  .||+.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356676  6777777777777777776654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.48  E-value=4.8e-08  Score=41.34  Aligned_cols=27  Identities=11%  Similarity=0.245  Sum_probs=16.7

Q ss_pred             ceecCCCccccccchhHHhhccccCcc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      +|.|..|++.|.....|..|+++|+.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            456666666666666666666665544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.45  E-value=1.3e-07  Score=39.91  Aligned_cols=27  Identities=22%  Similarity=0.482  Sum_probs=17.2

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      +|.|.+|++.|...+.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            466666666666666666666666544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.45  E-value=2.9e-08  Score=43.21  Aligned_cols=28  Identities=14%  Similarity=0.154  Sum_probs=21.3

Q ss_pred             CceecCCCccccccchhHHhhccccCcc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      +||.|..|++.|.....|..|+++|..+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            4678888888888888888888776544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.45  E-value=9.2e-08  Score=39.56  Aligned_cols=26  Identities=12%  Similarity=0.363  Sum_probs=17.9

Q ss_pred             ceecCCCccccccchhHHhhccccCc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ||.|..|++.|.....|..|+++|..
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777776653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=7.8e-08  Score=40.31  Aligned_cols=27  Identities=26%  Similarity=0.629  Sum_probs=15.7

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455666666666666666666555443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=3.6e-08  Score=46.80  Aligned_cols=33  Identities=18%  Similarity=0.318  Sum_probs=24.0

Q ss_pred             CccccCcccCC--CcccccCCHHHHHHHHHHcCCC
Q psy370           16 SYTIFVASQCP--VCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        16 ~~~~~~~~~c~--~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      .|+++++|.|.  .|++.|...+.|..|+++|+++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            46777777774  5777777777777777777664

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.42  E-value=1.6e-07  Score=38.74  Aligned_cols=26  Identities=19%  Similarity=0.644  Sum_probs=17.2

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCC
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      +|.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=2.9e-08  Score=42.13  Aligned_cols=28  Identities=25%  Similarity=0.554  Sum_probs=19.1

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5667777777777777777777666543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3e-08  Score=42.09  Aligned_cols=27  Identities=11%  Similarity=0.277  Sum_probs=20.4

Q ss_pred             CceecCCCccccccchhHHhhccccCc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +||.|..|++.|.....|..|+++|+.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            567788888888777778778777654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3.1e-08  Score=41.84  Aligned_cols=28  Identities=29%  Similarity=0.595  Sum_probs=18.8

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ++|.|..|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3567777777777777777777666553

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=3.2e-08  Score=40.76  Aligned_cols=25  Identities=20%  Similarity=0.440  Sum_probs=20.0

Q ss_pred             CceecCCCccccccchhHHhhcccc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      +||.|..||+.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4678888888888888888888765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=1.9e-07  Score=40.23  Aligned_cols=27  Identities=15%  Similarity=0.262  Sum_probs=17.4

Q ss_pred             CceecC--CCccccccchhHHhhccccCc
Q psy370           79 RGFVCE--ICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        79 ~~~~C~--~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +||.|.  .|++.|.....|..|+++|..
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            466666  666666666666666666554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4.1e-08  Score=41.45  Aligned_cols=27  Identities=11%  Similarity=0.308  Sum_probs=19.7

Q ss_pred             CceecCCCccccccchhHHhhccccCc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +||.|..|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            367777777777777777777777654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.36  E-value=3.4e-07  Score=40.95  Aligned_cols=28  Identities=18%  Similarity=0.522  Sum_probs=15.1

Q ss_pred             CCCceecCC--CccccccchhHHhhccccC
Q psy370           77 EERGFVCEI--CGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~--C~~~~~~~~~l~~h~~~~~  104 (111)
                      ++++|.|..  |++.|.....|..|+++|.
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            455555552  5555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=1.8e-07  Score=39.58  Aligned_cols=27  Identities=26%  Similarity=0.656  Sum_probs=17.3

Q ss_pred             cccCCCcccccCCHHHHHHH-HHHcCCC
Q psy370           22 ASQCPVCKKIYTDQQLFQNH-LETHDNE   48 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h-~~~h~~~   48 (111)
                      +|.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666676666666666666 4556554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.35  E-value=2.5e-07  Score=39.58  Aligned_cols=26  Identities=15%  Similarity=0.369  Sum_probs=16.1

Q ss_pred             ceecC--CCccccccchhHHhhccccCc
Q psy370           80 GFVCE--ICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        80 ~~~C~--~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ||.|.  .|++.|.....|..|+++|.+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            56665  666666666666666666554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.34  E-value=3.1e-07  Score=38.80  Aligned_cols=27  Identities=11%  Similarity=0.432  Sum_probs=19.3

Q ss_pred             CceecCCCccccccchhHHhh-ccccCc
Q psy370           79 RGFVCEICGHVVDEMPVATQS-SKYPGQ  105 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h-~~~~~~  105 (111)
                      +||.|..|++.|.....|..| ++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            367788888888877778888 555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=1.1e-07  Score=39.88  Aligned_cols=25  Identities=12%  Similarity=0.159  Sum_probs=14.0

Q ss_pred             ceecCCCccccccchhHHhhccccC
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ||.|..|++.|.....|..|+++|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhc
Confidence            4555555555555555555555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=7.4e-08  Score=45.68  Aligned_cols=34  Identities=9%  Similarity=0.113  Sum_probs=23.9

Q ss_pred             HHhccCCCCCceecC--CCccccccchhHHhhccccCc
Q psy370           70 VHSHLSMEERGFVCE--ICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        70 ~~~h~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ...|.  +++||.|.  .|++.|.....|..|+++|.+
T Consensus        10 ~~~H~--~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           10 YVKEM--PDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SCEEE--TTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HhccC--CCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            33455  67778884  588888777778777777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.30  E-value=1.2e-06  Score=44.68  Aligned_cols=30  Identities=20%  Similarity=0.311  Sum_probs=27.5

Q ss_pred             cCCCCCccccccCcccCCHHHHHHHHHhcc
Q psy370           45 HDNEMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        45 h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +.++++|.|..|++.|.....|..|++.|+
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            567899999999999999999999999997

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.60  E-value=1e-07  Score=39.18  Aligned_cols=25  Identities=24%  Similarity=0.543  Sum_probs=17.3

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHc
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      ++|.|.+||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567777777777777777776655

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.26  E-value=1.1e-06  Score=36.58  Aligned_cols=25  Identities=28%  Similarity=0.727  Sum_probs=12.2

Q ss_pred             CccccccCcccCCHHHHHHHHHhcc
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +|.|..|++.|...+.|..|++.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhc
Confidence            3445555555555555555544443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.21  E-value=9.8e-07  Score=36.75  Aligned_cols=24  Identities=13%  Similarity=0.264  Sum_probs=12.0

Q ss_pred             ceecCCCccccccchhHHhhcccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      ||.|..|++.|.....|..|+++|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHHHh
Confidence            445555555555555555555444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.18  E-value=1.1e-06  Score=36.66  Aligned_cols=25  Identities=20%  Similarity=0.546  Sum_probs=17.7

Q ss_pred             cccCC--CcccccCCHHHHHHHHHHcC
Q psy370           22 ASQCP--VCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        22 ~~~c~--~C~~~f~~~~~l~~h~~~h~   46 (111)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56677  77777777777777776664

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.13  E-value=9.6e-07  Score=36.82  Aligned_cols=25  Identities=20%  Similarity=0.450  Sum_probs=17.2

Q ss_pred             ceecC--CCccccccchhHHhhccccC
Q psy370           80 GFVCE--ICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        80 ~~~C~--~C~~~~~~~~~l~~h~~~~~  104 (111)
                      +|.|.  .|++.|.....|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56677  77777777777777776654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.87  E-value=5.7e-05  Score=38.13  Aligned_cols=24  Identities=13%  Similarity=0.300  Sum_probs=13.6

Q ss_pred             ceecC--CCccccccchhHHhhcccc
Q psy370           80 GFVCE--ICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        80 ~~~C~--~C~~~~~~~~~l~~h~~~~  103 (111)
                      +|.|.  .|++.+.....|..|+++.
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45664  4666555555566665543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.77  E-value=4e-05  Score=38.71  Aligned_cols=51  Identities=18%  Similarity=0.352  Sum_probs=42.6

Q ss_pred             ccCCCcccccCCHHHHHHHHH-HcCCCC------Ccccc--ccCcccCCHHHHHHHHHhc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLE-THDNEM------DYSCE--HCDMQFNCKSDMRKHVHSH   73 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~-~h~~~~------~~~c~--~c~~~f~~~~~l~~h~~~h   73 (111)
                      +.+..|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            345679999999999999984 687665      78996  6999999999999998853

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.43  E-value=7.8e-05  Score=42.47  Aligned_cols=32  Identities=13%  Similarity=0.304  Sum_probs=27.4

Q ss_pred             CCCCccccCcccCCCcccccCCHHHHHHHHHH
Q psy370           13 IPGSYTIFVASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        13 ~~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      ....++|+++|.|..|++.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34568999999999999999999999998764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.36  E-value=5.3e-05  Score=43.17  Aligned_cols=26  Identities=8%  Similarity=0.034  Sum_probs=19.2

Q ss_pred             CCCceecCCCccccccchhHHhhccc
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      |+++|.|..|++.|.+...|..|++.
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhh
Confidence            66777777777777777777777754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.61  E-value=0.00058  Score=31.97  Aligned_cols=23  Identities=13%  Similarity=0.218  Sum_probs=14.2

Q ss_pred             ceecCCCccccccchhHHhhccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      +|.|+.|+..|....+|..|+++
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhh
Confidence            45666666666666666666653

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.51  E-value=0.0053  Score=35.04  Aligned_cols=76  Identities=22%  Similarity=0.367  Sum_probs=48.8

Q ss_pred             cCcccCCCcccccCCHHHHHHHH--HHcCCC-CCccccc------cCcccCCHHHHHHHHHhccCCCCCceecCCCcccc
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHL--ETHDNE-MDYSCEH------CDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVV   90 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~--~~h~~~-~~~~c~~------c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~   90 (111)
                      .+++.|..|+..|.+.+.+..|.  +.|... +.+.+..      -+..+....    +...+.  +...|.|..|.+.|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~C~~C~~~f  103 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDG--EDRSKCCPVCNMTF  103 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSC--CCTTTEETTTTEEC
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccC--CCCCeEcCCCCCEe
Confidence            35688999999999999999998  344321 1222210      011121110    111222  56778999999999


Q ss_pred             ccchhHHhhcc
Q psy370           91 DEMPVATQSSK  101 (111)
Q Consensus        91 ~~~~~l~~h~~  101 (111)
                      .+...|.+|..
T Consensus       104 ~s~~~~~~H~~  114 (127)
T 1zu1_A          104 SSPVVAESHYI  114 (127)
T ss_dssp             SSHHHHHHHHT
T ss_pred             CCHHHHHHHHC
Confidence            99999999985

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.42  E-value=0.0039  Score=35.60  Aligned_cols=24  Identities=21%  Similarity=0.333  Sum_probs=21.0

Q ss_pred             CCCccccccCcccCCHHHHHHHHH
Q psy370           48 EMDYSCEHCDMQFNCKSDMRKHVH   71 (111)
Q Consensus        48 ~~~~~c~~c~~~f~~~~~l~~h~~   71 (111)
                      .+++.|.+|...|.+.+.+..|..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~   53 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQ   53 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHC
Confidence            367899999999999999999983

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.24  E-value=0.0044  Score=28.98  Aligned_cols=24  Identities=17%  Similarity=0.441  Sum_probs=21.7

Q ss_pred             CcccCCCcccccCCHHHHHHHHHH
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      ..|.|+.|+..|.....|..||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            788999999999999999999874

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.42  E-value=0.0064  Score=26.56  Aligned_cols=28  Identities=14%  Similarity=0.300  Sum_probs=21.9

Q ss_pred             ceecCCCccccccchhHHhhccccCccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      .|.|+.|.+.+.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999988888888886555443

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=93.66  E-value=0.05  Score=28.29  Aligned_cols=45  Identities=20%  Similarity=0.302  Sum_probs=27.3

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCC
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNC   62 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~   62 (111)
                      +.....|.|..||.+++-+ .+..|...-.+...+.|..|+..|..
T Consensus         5 ~~~MV~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            5 SSGMVFFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             SCCCCEEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             CCceeEEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeCC
Confidence            3444557777777776554 46666554444445677777776664

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.36  E-value=0.2  Score=29.65  Aligned_cols=74  Identities=14%  Similarity=0.194  Sum_probs=47.2

Q ss_pred             CcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           27 VCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        27 ~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      .|+..+.. ..+..|... -...+..|..|+..+ ....+..|....-  ..+...|..|+..+... .|..|..++..+
T Consensus        89 GC~~~~~~-~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C--~~r~~~C~~C~~~~~~~-~l~~H~~~~~~~  162 (170)
T 3hcs_A           89 GCLHKMEL-RHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDC--PRRQVSCDNCAASMAFE-DKEIHDQNCPLA  162 (170)
T ss_dssp             TCCCEEEG-GGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTC--TTCEEECTTTCCEEEGG-GHHHHHTTCCC-
T ss_pred             CCCceecH-hHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhC--CCCCeECCCCCCccCHH-HHHhHHHhCcCh
Confidence            45544432 245555432 233556788888766 5667888886555  56777899999888776 478888766544

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=92.12  E-value=0.06  Score=22.90  Aligned_cols=26  Identities=8%  Similarity=0.203  Sum_probs=19.4

Q ss_pred             eecCCCccccccchhHHhhccccCcc
Q psy370           81 FVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      ..|..|.+.++....|.+|++..|+-
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            46888888888777888888766654

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.63  E-value=0.57  Score=20.46  Aligned_cols=25  Identities=12%  Similarity=0.372  Sum_probs=16.5

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHH
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      ...+.|..|+-+|.....+..|.+.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3456677777777777777776543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.43  E-value=0.16  Score=30.07  Aligned_cols=56  Identities=16%  Similarity=0.334  Sum_probs=40.9

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCc
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERG   80 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~   80 (111)
                      .+..|+.|+..+ ....+..|....-..+...|..|+..+. ...+..|.....  |+.+
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~--~~~~  164 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCP--LALE  164 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCC--C---
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCc--Chhh
Confidence            356789999887 4456889987777778889999988764 467788988776  5544

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.02  E-value=0.6  Score=24.24  Aligned_cols=51  Identities=18%  Similarity=0.269  Sum_probs=36.2

Q ss_pred             CCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhcc
Q psy370           47 NEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSK  101 (111)
Q Consensus        47 ~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~  101 (111)
                      ....|.|..|+..+.-+ .+..|...-.  +...|-|..|++.|.. ..+..|.+
T Consensus         7 ~MV~F~C~~Cgd~lKK~-kv~~H~~~Cr--~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            7 GMVFFTCNACGESVKKI-QVEKHVSNCR--NCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             CCCEEEESSSCCEEETT-HHHHHHHHCT--TCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             ceeEEEcCCCCCeeecc-cchhHHhhCC--CCCcEEecccCCeeCC-CCEeCEee
Confidence            34568999999876554 5666765432  4457999999999986 45777764

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=88.94  E-value=0.3  Score=20.17  Aligned_cols=22  Identities=27%  Similarity=0.452  Sum_probs=18.1

Q ss_pred             cccCCCcccccCCHHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLE   43 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~   43 (111)
                      .+.|++|....++...++.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            3679999999999988888854

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=88.70  E-value=0.1  Score=27.27  Aligned_cols=56  Identities=20%  Similarity=0.410  Sum_probs=28.8

Q ss_pred             ccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEM   93 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~   93 (111)
                      -+|+.||.+...... ...|.+-..        ....|.....+..-..      +=.|+|+.||--|.-+
T Consensus         9 ~~~PlCG~~L~W~eL-IeQML~~en--------~~ei~kDr~~Fl~~~e------~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A            9 AKCPICGSPLKWEEL-IEEMLIIEN--------FEEIVKDRERFLAQVE------EFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             EECSSSCCEECHHHH-HHHSTTCST--------HHHHTTCHHHHHHHHH------HSEEECTTTCCEEETT
T ss_pred             ccCCcCCCccCHHHH-HHHHHhhcc--------HHHHHhhHHHHHHHHH------HHhhcCCCccHHHhcc
Confidence            369999999877754 333332211        1123444444433222      2346777777666433

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.51  E-value=0.14  Score=26.50  Aligned_cols=28  Identities=18%  Similarity=0.292  Sum_probs=19.6

Q ss_pred             ceecCCCccccc-------cchhHHhhccccCccc
Q psy370           80 GFVCEICGHVVD-------EMPVATQSSKYPGQQN  107 (111)
Q Consensus        80 ~~~C~~C~~~~~-------~~~~l~~h~~~~~~~~  107 (111)
                      --.|.+|++.+.       .-..|..|++..|..+
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e   62 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREE   62 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHH
Confidence            457888888876       2346888888777543

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.80  E-value=0.37  Score=26.44  Aligned_cols=32  Identities=19%  Similarity=0.326  Sum_probs=22.7

Q ss_pred             CCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEM   93 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~   93 (111)
                      .++.|..||..|.          ..   ..+|-.|+.|+......
T Consensus        66 ~p~~C~~CG~~F~----------~~---~~kPsrCP~CkSe~Ie~   97 (105)
T 2gmg_A           66 KPAQCRKCGFVFK----------AE---INIPSRCPKCKSEWIEE   97 (105)
T ss_dssp             CCCBBTTTCCBCC----------CC---SSCCSSCSSSCCCCBCC
T ss_pred             ECcChhhCcCeec----------cc---CCCCCCCcCCCCCccCC
Confidence            5788999998881          11   45677899998766544

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=84.35  E-value=0.41  Score=21.37  Aligned_cols=22  Identities=27%  Similarity=0.451  Sum_probs=14.9

Q ss_pred             CCceecCCCccccccchhHHhhc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSS  100 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~  100 (111)
                      +..+.|+.|++.+... ....|.
T Consensus         7 ~~~~~C~~C~~~i~~~-~~~EH~   28 (39)
T 2i5o_A            7 EDQVPCEKCGSLVPVW-DMPEHM   28 (39)
T ss_dssp             CCEEECTTTCCEEEGG-GHHHHH
T ss_pred             CCCcccccccCcCCcc-cccchh
Confidence            3457888898888763 445554

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=81.82  E-value=0.62  Score=28.60  Aligned_cols=10  Identities=20%  Similarity=0.318  Sum_probs=5.2

Q ss_pred             CccccccCcc
Q psy370           50 DYSCEHCDMQ   59 (111)
Q Consensus        50 ~~~c~~c~~~   59 (111)
                      .|.|.+||..
T Consensus       171 ~~~C~~CG~i  180 (202)
T 1yuz_A          171 FHLCPICGYI  180 (202)
T ss_dssp             EEECSSSCCE
T ss_pred             EEEECCCCCE
Confidence            3555555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	111
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.003

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 4e-04
 Identities = 6/36 (16%), Positives = 11/36 (30%)

Query: 41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSHLSM 76
                    + C  CD  F+    +  H   H+ +
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.001
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
          TH  E  Y C  C  +F     M+ H+   
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.002
 Identities = 12/46 (26%), Positives = 18/46 (39%)

Query: 28 CKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
          C K +T +     H+  H     Y C  C  +F  K  +  H+  H
Sbjct: 8  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.6 bits (72), Expect = 0.002
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 44 THDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
          TH  E  Y+C HCD  F  K  +  H   +
Sbjct: 2  THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.9 bits (70), Expect = 0.003
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 41 HLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH 73
                    Y C+ C   F+  SD+ KH  +H
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	111
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.74
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.74
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.41
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.37
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.35
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.33
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.31
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.3
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.23
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.23
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.21
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.2
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.18
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.05
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.04
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.0
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.95
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.95
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.93
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.9
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.84
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.84
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.74
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.69
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.62
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.58
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.55
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.38
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.36
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.26
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.19
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.19
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.16
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.16
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.08
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.98
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.98
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.89
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.86
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.85
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.79
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.78
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.78
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.76
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.74
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.67
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.6
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.54
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.47
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.47
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.29
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.28
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.23
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.22
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.21
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.15
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.08
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.06
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	97.02
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.0
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.95
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.89
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.89
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.87
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.78
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.75
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.7
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.67
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.45
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.41
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.35
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.23
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.19
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.17
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.75
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.68
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.62
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.51
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.47
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.45
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.43
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.4
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	95.14
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	94.83
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	94.4
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.01
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.88
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.57
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.34
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.28
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.93
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.62
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.92
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	87.84
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.26
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	85.81
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.13
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	83.53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-18  Score=85.37  Aligned_cols=52  Identities=27%  Similarity=0.510  Sum_probs=30.2

Q ss_pred             CCccccccCcccCCHHHHHHHHHhccCCCCCceecCCCccccccchhHHhhcccc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      ++|.|. ||+.|....+|..|++.|+  |++||.|.+||+.|...+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht--~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHL--GLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHS--CCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccc--cccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            455553 5555555555555655555  555666666666666666666665544

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1e-18  Score=85.50  Aligned_cols=53  Identities=25%  Similarity=0.473  Sum_probs=50.9

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcccCCHHHHHHHHHhc
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQFNCKSDMRKHVHSH   73 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~f~~~~~l~~h~~~h   73 (111)
                      |++|+| +||+.|.....|..|+++|+++++|.|.+||++|...+.|..|++.|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 59999999999999999999999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=8e-14  Score=62.95  Aligned_cols=36  Identities=19%  Similarity=0.459  Sum_probs=23.7

Q ss_pred             ccCcccCCCcccccCCHHHHHHHHH-HcCCCCCcccc
Q psy370           19 IFVASQCPVCKKIYTDQQLFQNHLE-THDNEMDYSCE   54 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~   54 (111)
                      .++||.|.+||+.|...+.|..|++ +|++++||.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4566667777777776666666654 46666666664

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=7.1e-14  Score=60.86  Aligned_cols=32  Identities=19%  Similarity=0.342  Sum_probs=25.4

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ||+++||.|.+||++|...+.|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            67788888888888888888888888887764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1e-13  Score=61.80  Aligned_cols=33  Identities=15%  Similarity=0.316  Sum_probs=23.8

Q ss_pred             hccCCCCCceecCCCccccccchhHHhhccccCcc
Q psy370           72 SHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        72 ~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      .|+  ||+||+|.+||++|...+.|..|+++|+++
T Consensus         2 ~HT--gekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THT--GEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCC--CCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCC--CCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            455  677777777777777777777777777654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=4.4e-13  Score=60.41  Aligned_cols=35  Identities=20%  Similarity=0.275  Sum_probs=25.4

Q ss_pred             CCCccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           14 PGSYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        14 ~~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      ...|++++||.|++||++|...+.|..|+++|+||
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            34577777777777777777777777777777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=5.7e-13  Score=58.65  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=26.6

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCC
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      |||++||.|.+|++.|...+.|..|+++|++..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            678888888888888888888888888887653

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=9.8e-13  Score=59.29  Aligned_cols=37  Identities=24%  Similarity=0.594  Sum_probs=32.6

Q ss_pred             CCCCccccccCcccCCHHHHHHHHH-hccCCCCCceecCC
Q psy370           47 NEMDYSCEHCDMQFNCKSDMRKHVH-SHLSMEERGFVCEI   85 (111)
Q Consensus        47 ~~~~~~c~~c~~~f~~~~~l~~h~~-~h~~~~~~~~~C~~   85 (111)
                      .++||.|..||+.|...++|..|++ .|+  |++||.|..
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht--~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT--SERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC--CCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC--CCcCcCCcC
Confidence            4689999999999999999999976 688  899999963

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=2.1e-13  Score=61.10  Aligned_cols=33  Identities=12%  Similarity=0.158  Sum_probs=20.4

Q ss_pred             HHHhccCCCCCceecCCCccccccchhHHhhcccc
Q psy370           69 HVHSHLSMEERGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        69 h~~~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      |.|.|+  ||+||.|..|++.|..++.|..|+++|
T Consensus         2 h~R~HT--geKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGST--GIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTC--CSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccC--CccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            345555  566666666666666666666666655

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=3.2e-13  Score=60.05  Aligned_cols=34  Identities=18%  Similarity=0.271  Sum_probs=24.1

Q ss_pred             hccCCCCCceecCCCccccccchhHHhhccccCccc
Q psy370           72 SHLSMEERGFVCEICGHVVDEMPVATQSSKYPGQQN  107 (111)
Q Consensus        72 ~h~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~  107 (111)
                      .|+  ||+||.|..|++.|..++.|..|++.+|.+|
T Consensus         2 ~HT--gekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           2 THS--GEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCS--CCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             ccC--CCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            455  7777777777777777777777776666543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.5e-12  Score=57.85  Aligned_cols=33  Identities=21%  Similarity=0.385  Sum_probs=23.4

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      .|||++||.|.+||++|...+.|..|+++|.++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            467777777777777777777777777776653

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=4.7e-13  Score=60.31  Aligned_cols=28  Identities=18%  Similarity=0.446  Sum_probs=14.5

Q ss_pred             CCCceecCCCccccccchhHHhhccccC
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      +++||.|..||++|...+.|..|+++|.
T Consensus         9 ~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   36 (38)
T d2cota2           9 ERRRYKCDECGKSFSHSSDLSKHRRTHT   36 (38)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             CCCCEecCCCCceeeCHHHHHHhCccCC
Confidence            4555555555555555555555555544

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=4.4e-12  Score=56.68  Aligned_cols=32  Identities=22%  Similarity=0.378  Sum_probs=21.7

Q ss_pred             CCccccCcccCCCcccccCCHHHHHHHHHHcC
Q psy370           15 GSYTIFVASQCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        15 ~~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      ..||+|+||.|++|+++|...+.|..|+++|.
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            45667777777777777777777777766664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=2.5e-12  Score=56.55  Aligned_cols=29  Identities=24%  Similarity=0.399  Sum_probs=20.7

Q ss_pred             CCCceecCCCccccccchhHHhhccccCc
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ||+||+|..|++.|..+..|..|+++|.+
T Consensus         4 GekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           4 GKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCccccCCCCCCcccChHHHHHHccccCC
Confidence            67777777777777777777777776654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.22  E-value=4.5e-12  Score=53.50  Aligned_cols=29  Identities=28%  Similarity=0.624  Sum_probs=21.4

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=6.4e-12  Score=54.50  Aligned_cols=29  Identities=17%  Similarity=0.397  Sum_probs=16.0

Q ss_pred             CCCceecCCCccccccchhHHhhccccCc
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      |++||+|..||++|...+.|..|+++|.+
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            55555555555555555555555555543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=3.1e-12  Score=53.46  Aligned_cols=28  Identities=21%  Similarity=0.545  Sum_probs=20.2

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCC
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      |+||.|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5677777777777777777777777764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=6.2e-12  Score=53.01  Aligned_cols=29  Identities=28%  Similarity=0.612  Sum_probs=20.7

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      +||.|++||+.|...+.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=2.3e-11  Score=53.88  Aligned_cols=29  Identities=14%  Similarity=0.288  Sum_probs=21.1

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHH
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      .||||+||.|+.|++.|...+.|..|++.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            57777777777777777777777777643

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=7e-12  Score=52.35  Aligned_cols=26  Identities=19%  Similarity=0.341  Sum_probs=14.1

Q ss_pred             CCceecCCCccccccchhHHhhcccc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      |+||+|..|++.|..++.|..|+++|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCc
Confidence            34555555555555555555555544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.2e-11  Score=49.69  Aligned_cols=26  Identities=23%  Similarity=0.468  Sum_probs=18.8

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      +||+|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777777663

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.8e-11  Score=49.96  Aligned_cols=25  Identities=12%  Similarity=0.352  Sum_probs=19.8

Q ss_pred             CceecCCCccccccchhHHhhcccc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      |||+|.+||+.|..++.|.+|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            5788888888888888888887766

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.7e-11  Score=52.49  Aligned_cols=32  Identities=31%  Similarity=0.775  Sum_probs=19.7

Q ss_pred             ccCCC--cccccCCHHHHHHHHHHcCCCCCcccc
Q psy370           23 SQCPV--CKKIYTDQQLFQNHLETHDNEMDYSCE   54 (111)
Q Consensus        23 ~~c~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~   54 (111)
                      |.|+.  ||+.|...+.|..|+++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            34443  666666666666666666666666664

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.00  E-value=1.8e-10  Score=48.43  Aligned_cols=26  Identities=27%  Similarity=0.677  Sum_probs=16.4

Q ss_pred             CCccccccCcccCCHHHHHHHHHhcc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +||.|.+|++.|...+.|..|++.|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            35666666666666666666666665

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.7e-10  Score=47.69  Aligned_cols=28  Identities=29%  Similarity=0.705  Sum_probs=20.4

Q ss_pred             CcccCCC--cccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCPV--CKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~~--C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      +||.|++  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677766  777777777777777777764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.3e-10  Score=50.46  Aligned_cols=33  Identities=33%  Similarity=0.921  Sum_probs=30.1

Q ss_pred             ccccc--cCcccCCHHHHHHHHHhccCCCCCceecCC
Q psy370           51 YSCEH--CDMQFNCKSDMRKHVHSHLSMEERGFVCEI   85 (111)
Q Consensus        51 ~~c~~--c~~~f~~~~~l~~h~~~h~~~~~~~~~C~~   85 (111)
                      |.|..  |++.|...+.|..|++.|+  |++||.|..
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht--gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS--DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH--TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC--CCCCEeCCC
Confidence            67876  9999999999999999999  899999973

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.2e-10  Score=47.61  Aligned_cols=25  Identities=24%  Similarity=0.720  Sum_probs=13.4

Q ss_pred             CccccccCcccCCHHHHHHHHHhcc
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ||.|.+|++.|...++|..|++.|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CEECCcCCCeecchHHhhhhcCccC
Confidence            4555555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.93  E-value=1.1e-10  Score=54.59  Aligned_cols=34  Identities=18%  Similarity=0.325  Sum_probs=26.7

Q ss_pred             CccccCcccCCC--cccccCCHHHHHHHHHHcCCCC
Q psy370           16 SYTIFVASQCPV--CKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        16 ~~~~~~~~~c~~--C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      .|++++||.|.+  |+++|...+.|..|+++|++++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            478888888866  8888888888888888888764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.8e-10  Score=47.74  Aligned_cols=28  Identities=21%  Similarity=0.477  Sum_probs=19.9

Q ss_pred             CcccCCC--cccccCCHHHHHHHHHHcCCC
Q psy370           21 VASQCPV--CKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        21 ~~~~c~~--C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      +||.|++  ||++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677755  777777777777777777664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=5e-11  Score=55.83  Aligned_cols=32  Identities=9%  Similarity=0.217  Sum_probs=22.4

Q ss_pred             ccCCCCCceecCC--CccccccchhHHhhccccCcc
Q psy370           73 HLSMEERGFVCEI--CGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        73 h~~~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      |.  |++||.|.+  |++.|..++.|..|+++|.++
T Consensus        13 h~--gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EM--PDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EE--TTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             cc--CCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            55  677777765  777777777777777776654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.3e-09  Score=46.35  Aligned_cols=29  Identities=31%  Similarity=0.486  Sum_probs=20.3

Q ss_pred             CcccCC--CcccccCCHHHHHHHHHHcCCCC
Q psy370           21 VASQCP--VCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        21 ~~~~c~--~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466774  47777777777777777777654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.74  E-value=3e-09  Score=45.50  Aligned_cols=28  Identities=14%  Similarity=0.312  Sum_probs=19.6

Q ss_pred             CCceecCC--CccccccchhHHhhccccCc
Q psy370           78 ERGFVCEI--CGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        78 ~~~~~C~~--C~~~~~~~~~l~~h~~~~~~  105 (111)
                      |+||.|..  |++.|...+.|..|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777765  77777777777777777654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=9e-09  Score=43.30  Aligned_cols=26  Identities=19%  Similarity=0.540  Sum_probs=14.8

Q ss_pred             CCccccc--cCcccCCHHHHHHHHHhcc
Q psy370           49 MDYSCEH--CDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        49 ~~~~c~~--c~~~f~~~~~l~~h~~~h~   74 (111)
                      +||.|.+  |++.|...+.|..|++.|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            3555555  5555555555555555555

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.63  E-value=5.1e-09  Score=43.73  Aligned_cols=27  Identities=22%  Similarity=0.625  Sum_probs=17.7

Q ss_pred             CcccCCC--cccccCCHHHHHHHHHHcCC
Q psy370           21 VASQCPV--CKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        21 ~~~~c~~--C~~~f~~~~~l~~h~~~h~~   47 (111)
                      +||.|.+  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4566655  77777777777777666654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=1.2e-08  Score=43.58  Aligned_cols=27  Identities=19%  Similarity=0.395  Sum_probs=15.3

Q ss_pred             cCcccCCC--cccccCCHHHHHHHHHHcC
Q psy370           20 FVASQCPV--CKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        20 ~~~~~c~~--C~~~f~~~~~l~~h~~~h~   46 (111)
                      |+||.|.+  |++.|...+.|..|+++|+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            34555554  5555555555555555554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.1e-08  Score=43.10  Aligned_cols=25  Identities=28%  Similarity=0.725  Sum_probs=12.1

Q ss_pred             Cccccc--cCcccCCHHHHHHHHHhcc
Q psy370           50 DYSCEH--CDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        50 ~~~c~~--c~~~f~~~~~l~~h~~~h~   74 (111)
                      ||.|.+  |++.|...++|..|++.|+
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CccCCCCCCCceECcHHHcCccccccC
Confidence            444443  4455555555555554444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=1.1e-08  Score=40.97  Aligned_cols=26  Identities=27%  Similarity=0.602  Sum_probs=21.7

Q ss_pred             CCceecCCCccccccchhHHhhcccc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      |+||.|..||+.|..++.-..|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            57888888888888888888888876

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=2.8e-08  Score=42.14  Aligned_cols=25  Identities=20%  Similarity=0.675  Sum_probs=12.2

Q ss_pred             Ccccc--ccCcccCCHHHHHHHHHhcc
Q psy370           50 DYSCE--HCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        50 ~~~c~--~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ||.|.  .|++.|...++|..|++.|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            44443  25555555555555555554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=2.6e-08  Score=38.69  Aligned_cols=26  Identities=23%  Similarity=0.695  Sum_probs=15.5

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCC
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      |++|++|++.|+.+..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666666553

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=9.5e-09  Score=42.88  Aligned_cols=25  Identities=16%  Similarity=0.418  Sum_probs=15.9

Q ss_pred             CceecCC--CccccccchhHHhhcccc
Q psy370           79 RGFVCEI--CGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        79 ~~~~C~~--C~~~~~~~~~l~~h~~~~  103 (111)
                      +||.|.+  |++.|..++.|..|+++|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~H   27 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIH   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCcc
Confidence            4666655  666666666666666655

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=9.2e-09  Score=42.49  Aligned_cols=25  Identities=16%  Similarity=0.327  Sum_probs=17.9

Q ss_pred             CceecCC--CccccccchhHHhhcccc
Q psy370           79 RGFVCEI--CGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        79 ~~~~C~~--C~~~~~~~~~l~~h~~~~  103 (111)
                      +||.|..  ||+.|...+.|..|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            4677765  777777777777777765

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1.5e-08  Score=41.80  Aligned_cols=25  Identities=28%  Similarity=0.692  Sum_probs=14.4

Q ss_pred             cccCCC--cccccCCHHHHHHHHHHcC
Q psy370           22 ASQCPV--CKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        22 ~~~c~~--C~~~f~~~~~l~~h~~~h~   46 (111)
                      ||.|++  ||++|...+.|..|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            555544  6666666666666665553

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=8.8e-08  Score=37.16  Aligned_cols=23  Identities=17%  Similarity=0.446  Sum_probs=11.4

Q ss_pred             eecCCCccccccchhHHhhcccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      .+|+.|++.|++++.|..|++.|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGC
T ss_pred             CccchhhhHhcchhHHHHHhhcc
Confidence            34555555555555555555444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.7e-07  Score=38.01  Aligned_cols=29  Identities=24%  Similarity=0.551  Sum_probs=22.1

Q ss_pred             cCcccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           20 FVASQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        20 ~~~~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      |+||.|++|+..|..+.-+.-|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            56788888888888887777777777653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.1e-07  Score=38.63  Aligned_cols=29  Identities=31%  Similarity=0.653  Sum_probs=14.0

Q ss_pred             ccCCCcccccCCHHHHHHHHHHcCCCCCc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETHDNEMDY   51 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h~~~~~~   51 (111)
                      .-|..||+.|..-..|..|..+|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34444555555444444444444444443

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=3.4e-07  Score=36.16  Aligned_cols=26  Identities=23%  Similarity=0.546  Sum_probs=18.0

Q ss_pred             ccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      +.|.+||+.|...+.|..|+.+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45777777777777777777777653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=4.4e-07  Score=37.62  Aligned_cols=31  Identities=26%  Similarity=0.484  Sum_probs=26.8

Q ss_pred             CCccccccCcccCCHHHHHHHHHhccCCCCCce
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHLSMEERGF   81 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~~~~~~~~   81 (111)
                      +...|..||+.|.....|..|...|.  +|+||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs--~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHS--GEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSC--SCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccC--CCCCC
Confidence            45678999999999999999998888  88887

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=6.1e-07  Score=35.59  Aligned_cols=27  Identities=22%  Similarity=0.318  Sum_probs=15.5

Q ss_pred             CceecCCCccccccchhHHhhccccCc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      +||+|..|.....+++.|..|.+.|..
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666666555555556666555543

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=7.3e-07  Score=35.60  Aligned_cols=27  Identities=26%  Similarity=0.709  Sum_probs=20.8

Q ss_pred             CCCccccccCcccCCHHHHHHHHHhcc
Q psy370           48 EMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        48 ~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ++||.|.+||+.|..+.....|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467888888888888888888777763

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=2.9e-07  Score=36.91  Aligned_cols=30  Identities=10%  Similarity=0.277  Sum_probs=25.1

Q ss_pred             CceecCCCccccccchhHHhhccccCcccc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPGQQNQ  108 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~  108 (111)
                      +||.|.+|......++.|..|+++.|+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            578899999888888889999988887653

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=2e-07  Score=37.84  Aligned_cols=26  Identities=42%  Similarity=0.743  Sum_probs=12.4

Q ss_pred             CCccccccCcccCCHHHHHHHHHhcc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +||.|++|...|....-+..|.++|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCcccchHHHHhhccccceEeeeccc
Confidence            44444444444444444444444443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.4e-07  Score=39.41  Aligned_cols=26  Identities=12%  Similarity=0.170  Sum_probs=23.4

Q ss_pred             CCCceecCCCccccccchhHHhhccc
Q psy370           77 EERGFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        77 ~~~~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      |-+||+|..|++.|-+++.++.|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            77999999999999999999999753

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=2.8e-06  Score=33.79  Aligned_cols=26  Identities=19%  Similarity=0.446  Sum_probs=17.9

Q ss_pred             ccCCCcccccCCHHHHHHHHHHcCCC
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      |.|+.||..-..++.|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56777777777777777777777664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.7e-06  Score=34.30  Aligned_cols=26  Identities=23%  Similarity=0.505  Sum_probs=13.2

Q ss_pred             CCccccccCcccCCHHHHHHHHHhcc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +||+|+.|..+-..++.|..|++.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CcceeeecccccCCchheEEeeeccc
Confidence            44555555555555555555555544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.98  E-value=3.9e-06  Score=36.31  Aligned_cols=29  Identities=21%  Similarity=0.560  Sum_probs=20.4

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCCCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      +.|.|.+|++.|.+..+|-.|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45777777777777777777777775443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.4e-06  Score=35.19  Aligned_cols=26  Identities=15%  Similarity=0.382  Sum_probs=21.4

Q ss_pred             CceecCC--CccccccchhHHhhccccC
Q psy370           79 RGFVCEI--CGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        79 ~~~~C~~--C~~~~~~~~~l~~h~~~~~  104 (111)
                      +||.|..  |++++..+++|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5788865  8889999988999988765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=5e-06  Score=32.71  Aligned_cols=24  Identities=25%  Similarity=0.526  Sum_probs=16.0

Q ss_pred             ccccccCcccCCHHHHHHHHHhcc
Q psy370           51 YSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        51 ~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      ..|..||++|..++.|..|+..|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTS
T ss_pred             chHHHHhHHHHHHHHHHHHhhccc
Confidence            456666777766666666666665

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.86  E-value=6.7e-06  Score=31.40  Aligned_cols=24  Identities=17%  Similarity=0.653  Sum_probs=18.6

Q ss_pred             ccCCCcccccCCHHHHHHHHHHcC
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      |+|..|.++|..++.|..|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            577888888888888888877763

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=8.5e-06  Score=32.87  Aligned_cols=25  Identities=32%  Similarity=0.627  Sum_probs=19.8

Q ss_pred             CcccCCC--cccccCCHHHHHHHHHHc
Q psy370           21 VASQCPV--CKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        21 ~~~~c~~--C~~~f~~~~~l~~h~~~h   45 (111)
                      +||.|..  |+++|+..++|..|++++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            4677766  888888888888888864

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=1.4e-05  Score=30.97  Aligned_cols=26  Identities=27%  Similarity=0.660  Sum_probs=19.7

Q ss_pred             cCCCcccccCCHHHHHHHHHHcCCCC
Q psy370           24 QCPVCKKIYTDQQLFQNHLETHDNEM   49 (111)
Q Consensus        24 ~c~~C~~~f~~~~~l~~h~~~h~~~~   49 (111)
                      +|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57778888888877777777777753

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=5.5e-06  Score=32.51  Aligned_cols=25  Identities=8%  Similarity=0.348  Sum_probs=14.9

Q ss_pred             CceecCCCccccccchhHHhhcccc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      +|++|..|...-..++.|.+|.++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4566666666666666666666555

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.78  E-value=6.9e-06  Score=31.37  Aligned_cols=24  Identities=13%  Similarity=0.394  Sum_probs=19.8

Q ss_pred             eecCCCccccccchhHHhhccccC
Q psy370           81 FVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      |+|..|.++|..+++|..|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888888763

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.9e-05  Score=31.29  Aligned_cols=24  Identities=33%  Similarity=0.778  Sum_probs=15.5

Q ss_pred             ccccccCcccCCHHHHHHHHHhcc
Q psy370           51 YSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        51 ~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      |.|..|+....-++-|..|++.|+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             ccccccCcccCCHHHHHHHHHHhc
Confidence            456666666666666666666665

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.74  E-value=1.1e-05  Score=32.88  Aligned_cols=26  Identities=8%  Similarity=0.308  Sum_probs=19.5

Q ss_pred             ceecCCCccccccchhHHhhccccCc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYPGQ  105 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~~~  105 (111)
                      ||.|..|++.|++++-|..|..--|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            67888888888888887777754443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=2.5e-05  Score=30.94  Aligned_cols=27  Identities=19%  Similarity=0.523  Sum_probs=16.8

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHcCC
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      ..|.|..|.+.|...-.|..||.+|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            345666666666666666666666655

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1.4e-05  Score=32.53  Aligned_cols=28  Identities=11%  Similarity=0.379  Sum_probs=22.4

Q ss_pred             CceecCC--CccccccchhHHhhccccCcc
Q psy370           79 RGFVCEI--CGHVVDEMPVATQSSKYPGQQ  106 (111)
Q Consensus        79 ~~~~C~~--C~~~~~~~~~l~~h~~~~~~~  106 (111)
                      +||.|+.  |.+.|++.++-.+|+.+.|+.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5888976  999999999988998555543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=4.2e-05  Score=33.29  Aligned_cols=24  Identities=21%  Similarity=0.506  Sum_probs=13.2

Q ss_pred             ccCcccCCCcccccCCHHHHHHHH
Q psy370           19 IFVASQCPVCKKIYTDQQLFQNHL   42 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~~~~~l~~h~   42 (111)
                      |-+||.|..|++.|-...++-.|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            445555555555555555555543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.47  E-value=6.1e-05  Score=32.44  Aligned_cols=26  Identities=23%  Similarity=0.653  Sum_probs=18.5

Q ss_pred             CCccccccCcccCCHHHHHHHHHhcc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +.|.|.+|++.|.+...|-.|++.|.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CccCCCCCCCccCCcccccchHhhhc
Confidence            45677777777777777777777664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=7.4e-05  Score=29.17  Aligned_cols=25  Identities=24%  Similarity=0.519  Sum_probs=14.4

Q ss_pred             CcccCCCcccccCCHHHHHHHHHHc
Q psy370           21 VASQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        21 ~~~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      +||+|..|.......++|..|++.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4555666655555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00013  Score=28.80  Aligned_cols=23  Identities=13%  Similarity=0.498  Sum_probs=12.7

Q ss_pred             cccCCCcccccCCHHHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      ||.|..|+-+|..+..|..||.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            35555555555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=7.6e-05  Score=29.55  Aligned_cols=23  Identities=17%  Similarity=0.303  Sum_probs=15.0

Q ss_pred             ceecCCCccccccchhHHhhccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      ||.|..|...|.....|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            46666666666666666666654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.23  E-value=5.1e-05  Score=29.97  Aligned_cols=25  Identities=12%  Similarity=0.183  Sum_probs=18.9

Q ss_pred             CceecCC--CccccccchhHHhhcccc
Q psy370           79 RGFVCEI--CGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        79 ~~~~C~~--C~~~~~~~~~l~~h~~~~  103 (111)
                      .||+|+.  |++.|+.++-|..|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677753  888888888888887765

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.22  E-value=0.00025  Score=27.98  Aligned_cols=27  Identities=30%  Similarity=0.660  Sum_probs=20.3

Q ss_pred             CCCccccccCcccCCHHHHHHHHHhcc
Q psy370           48 EMDYSCEHCDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        48 ~~~~~c~~c~~~f~~~~~l~~h~~~h~   74 (111)
                      +..|.|..|-..|...-.|..||..|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            356777778777888777777777776

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=8.8e-05  Score=28.19  Aligned_cols=22  Identities=9%  Similarity=0.191  Sum_probs=19.0

Q ss_pred             ceecCCCccccccchhHHhhcc
Q psy370           80 GFVCEICGHVVDEMPVATQSSK  101 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~  101 (111)
                      ||+|..|...|-.+.+|.+|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999998888988873

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.15  E-value=0.00029  Score=27.14  Aligned_cols=26  Identities=27%  Similarity=0.565  Sum_probs=21.1

Q ss_pred             cccccCcccCCHHHHHHHHHhccCCCCC
Q psy370           52 SCEHCDMQFNCKSDMRKHVHSHLSMEER   79 (111)
Q Consensus        52 ~c~~c~~~f~~~~~l~~h~~~h~~~~~~   79 (111)
                      .|+.|.+.|.+...|..|-+.|+  ||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht--gek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT--GEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS--SCC
T ss_pred             cCcchHHHHHHhHhhhhcccccc--CCC
Confidence            57888888888888888888887  553

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=7.8e-05  Score=29.59  Aligned_cols=22  Identities=23%  Similarity=0.655  Sum_probs=11.4

Q ss_pred             CccccccCcccCCHHHHHHHHH
Q psy370           50 DYSCEHCDMQFNCKSDMRKHVH   71 (111)
Q Consensus        50 ~~~c~~c~~~f~~~~~l~~h~~   71 (111)
                      ||+|..|.......++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            4555555555555555555544

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.0001  Score=29.25  Aligned_cols=26  Identities=27%  Similarity=0.442  Sum_probs=15.9

Q ss_pred             cccCC--CcccccCCHHHHHHHHHHcCC
Q psy370           22 ASQCP--VCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        22 ~~~c~--~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      ||+|.  -|.+.|.+.-.|.+|..+|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            45553  366666666666666666655

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00017  Score=29.91  Aligned_cols=24  Identities=21%  Similarity=0.492  Sum_probs=20.6

Q ss_pred             ceecCCCccccccchhHHhhcccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      .|.|..||++|.+++.+..|.--.
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            589999999999999998887543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=6.3e-05  Score=30.54  Aligned_cols=26  Identities=23%  Similarity=0.446  Sum_probs=15.2

Q ss_pred             CcccCCC--cccccCCHHHHHHHH-HHcC
Q psy370           21 VASQCPV--CKKIYTDQQLFQNHL-ETHD   46 (111)
Q Consensus        21 ~~~~c~~--C~~~f~~~~~l~~h~-~~h~   46 (111)
                      +||.|..  |.+.|.+.++--.|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3555544  666666666666665 5554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00037  Score=29.77  Aligned_cols=26  Identities=23%  Similarity=0.456  Sum_probs=17.4

Q ss_pred             cCcccC--CCcccccCCHHHHHHHHHHc
Q psy370           20 FVASQC--PVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        20 ~~~~~c--~~C~~~f~~~~~l~~h~~~h   45 (111)
                      ++||.|  +-|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            566766  55777777777777666555

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00067  Score=26.85  Aligned_cols=25  Identities=20%  Similarity=0.673  Sum_probs=15.3

Q ss_pred             CCccccccCcccCCHHHHHHHHHhc
Q psy370           49 MDYSCEHCDMQFNCKSDMRKHVHSH   73 (111)
Q Consensus        49 ~~~~c~~c~~~f~~~~~l~~h~~~h   73 (111)
                      +||.|+.|.......++|.+|....
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            3566666666666666666666543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00029  Score=27.51  Aligned_cols=25  Identities=8%  Similarity=0.080  Sum_probs=21.1

Q ss_pred             ceecCCCccccccchhHHhhccccC
Q psy370           80 GFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      |.+|+.|..+.++..+|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5688999999999999999988774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.00042  Score=26.24  Aligned_cols=22  Identities=18%  Similarity=0.578  Sum_probs=18.0

Q ss_pred             cccCCCcccccCCHHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLE   43 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~   43 (111)
                      ||+|..|...|-.+.+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6888888888888888887764

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.78  E-value=0.00053  Score=27.71  Aligned_cols=21  Identities=24%  Similarity=0.683  Sum_probs=11.2

Q ss_pred             cccCCCcccccCCHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHL   42 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~   42 (111)
                      ||.|.+|++.|.....+..|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            355555555555555555444

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00023  Score=30.43  Aligned_cols=27  Identities=15%  Similarity=0.379  Sum_probs=20.0

Q ss_pred             CCCceec--CCCccccccchhHHhhcccc
Q psy370           77 EERGFVC--EICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        77 ~~~~~~C--~~C~~~~~~~~~l~~h~~~~  103 (111)
                      .++||.|  +-|+.+|.+-+.|..|.+.|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            4678888  45888888888787777654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00079  Score=26.59  Aligned_cols=26  Identities=19%  Similarity=0.298  Sum_probs=21.0

Q ss_pred             CceecCCCccccccchhHHhhccccC
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      +||+|..|......++.|..|++--|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            47899999888888888988887544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.67  E-value=0.00076  Score=26.50  Aligned_cols=24  Identities=25%  Similarity=0.620  Sum_probs=16.7

Q ss_pred             cccCCC--cccccCCHHHHHHHHHHc
Q psy370           22 ASQCPV--CKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        22 ~~~c~~--C~~~f~~~~~l~~h~~~h   45 (111)
                      ||.|+.  |++.|...+.|..|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566643  777777777777776665

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.0014  Score=25.34  Aligned_cols=22  Identities=27%  Similarity=0.593  Sum_probs=14.5

Q ss_pred             cccCCCcccccCCHHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLE   43 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~   43 (111)
                      ||+|..||+.|-.+..|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4667777777777766666643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00079  Score=28.05  Aligned_cols=22  Identities=18%  Similarity=0.289  Sum_probs=17.2

Q ss_pred             CcccccCCHHHHHHHHHHcCCC
Q psy370           27 VCKKIYTDQQLFQNHLETHDNE   48 (111)
Q Consensus        27 ~C~~~f~~~~~l~~h~~~h~~~   48 (111)
                      --++.|.....|..|+++|+++
T Consensus        12 R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          12 RELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCcchhHHHHHHHHhhcCCC
Confidence            3456788888888999988875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.35  E-value=0.0009  Score=25.90  Aligned_cols=22  Identities=18%  Similarity=0.313  Sum_probs=17.0

Q ss_pred             ceecCCCccccccchhHHhhcc
Q psy370           80 GFVCEICGHVVDEMPVATQSSK  101 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~  101 (111)
                      ||+|..||+.+-.+-.|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888888888877777777754

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0021  Score=28.80  Aligned_cols=25  Identities=28%  Similarity=0.659  Sum_probs=21.9

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcC
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      .|+|..||+.|+....|.+|..-|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5889999999999999999987665

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.19  E-value=0.00081  Score=25.52  Aligned_cols=24  Identities=17%  Similarity=0.216  Sum_probs=19.1

Q ss_pred             eecCCCccccccchhHHhhccccC
Q psy370           81 FVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      |.|+.|-+-|.+++.+..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888877644

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.17  E-value=0.0025  Score=24.09  Aligned_cols=22  Identities=27%  Similarity=0.640  Sum_probs=18.9

Q ss_pred             ccCCCcccccCCHHHHHHHHHH
Q psy370           23 SQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      |+|+.|-+-|..+..+..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999998888654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.75  E-value=0.0035  Score=24.63  Aligned_cols=16  Identities=19%  Similarity=0.225  Sum_probs=7.8

Q ss_pred             CccccccchhHHhhcc
Q psy370           86 CGHVVDEMPVATQSSK  101 (111)
Q Consensus        86 C~~~~~~~~~l~~h~~  101 (111)
                      |.+.|.....|..|.-
T Consensus        10 c~kgf~tlhhltrhs~   25 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSL   25 (30)
T ss_dssp             CCCEESSTTHHHHHHH
T ss_pred             ccccchhhhhhhhhhc
Confidence            4455555544444443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0054  Score=23.69  Aligned_cols=23  Identities=22%  Similarity=0.535  Sum_probs=18.2

Q ss_pred             cccCCCcccccCCHHHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      .|+|+.|+.....+++|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            36788888888888888888765

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.62  E-value=0.0031  Score=25.72  Aligned_cols=23  Identities=22%  Similarity=0.499  Sum_probs=17.7

Q ss_pred             ceecCCCccccccchhHHhhccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      .|.|..||-.|++.+.|.-|+.+
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            36788888888888888877764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0087  Score=24.58  Aligned_cols=26  Identities=23%  Similarity=0.488  Sum_probs=18.5

Q ss_pred             cccCCCcccccCCHHHHHHHHHHcCC
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      .|.|..||++|.....+..|....++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46788888888888777777665443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0016  Score=29.18  Aligned_cols=25  Identities=20%  Similarity=0.369  Sum_probs=18.9

Q ss_pred             CceecCCCccccccchhHHhhcccc
Q psy370           79 RGFVCEICGHVVDEMPVATQSSKYP  103 (111)
Q Consensus        79 ~~~~C~~C~~~~~~~~~l~~h~~~~  103 (111)
                      --|.|..|||.|+....|.+|..-|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            3477888888888888888887544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0036  Score=24.21  Aligned_cols=22  Identities=18%  Similarity=0.339  Sum_probs=15.7

Q ss_pred             eecCCCccccccchhHHhhccc
Q psy370           81 FVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        81 ~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      |.|+.|+-...++++|..|++-
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            6677777777777777777653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.43  E-value=0.0045  Score=25.22  Aligned_cols=22  Identities=14%  Similarity=0.366  Sum_probs=19.4

Q ss_pred             cccCCCcccccCCHHHHHHHHH
Q psy370           22 ASQCPVCKKIYTDQQLFQNHLE   43 (111)
Q Consensus        22 ~~~c~~C~~~f~~~~~l~~h~~   43 (111)
                      .|.|..||-.|.+.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            5789999999999999999864

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.0076  Score=23.33  Aligned_cols=23  Identities=17%  Similarity=0.446  Sum_probs=14.6

Q ss_pred             ccCCCcccccCCHHHHHHHHHHc
Q psy370           23 SQCPVCKKIYTDQQLFQNHLETH   45 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~h   45 (111)
                      -+|++|..+-.++..|..|.+.|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            35666666666666666666655

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.14  E-value=0.0072  Score=28.90  Aligned_cols=40  Identities=25%  Similarity=0.476  Sum_probs=27.3

Q ss_pred             ccccCcccCCCcccccCCHHHHHHHHHHcCCCCCccccccCcc
Q psy370           17 YTIFVASQCPVCKKIYTDQQLFQNHLETHDNEMDYSCEHCDMQ   59 (111)
Q Consensus        17 ~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~c~~~   59 (111)
                      .+....|.|+.|++.|.....+.   ........|.|..|+..
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             cccCCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCE
Confidence            35566788999998887665544   34445567888888753

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.0031  Score=24.71  Aligned_cols=21  Identities=19%  Similarity=0.400  Sum_probs=17.4

Q ss_pred             CCCccccccchhHHhhccccC
Q psy370           84 EICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        84 ~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      +-||+.|+++..|.-|.++.|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            458999999998988888765

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.40  E-value=0.0074  Score=29.34  Aligned_cols=27  Identities=15%  Similarity=0.370  Sum_probs=22.8

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHH
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      .|...|.|..|++.|.+...|..|.++
T Consensus        11 pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          11 PGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCEEecccccCccCCHHHHHHHHcc
Confidence            456679999999999999999998754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.01  E-value=0.024  Score=23.27  Aligned_cols=27  Identities=30%  Similarity=0.481  Sum_probs=21.0

Q ss_pred             cccCcccCCCcccccCCHHHHHHHHHH
Q psy370           18 TIFVASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        18 ~~~~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      .++..|.|..|.+.|...+.+-.|-.+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            355678899999999888888877654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.0097  Score=28.90  Aligned_cols=23  Identities=9%  Similarity=0.076  Sum_probs=15.9

Q ss_pred             ceecCCCccccccchhHHhhccc
Q psy370           80 GFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        80 ~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      .|.|..|++.|.+..+|..|.+.
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            46677777777777777777653

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.57  E-value=0.026  Score=21.55  Aligned_cols=23  Identities=17%  Similarity=0.375  Sum_probs=18.4

Q ss_pred             cCCCcccccCCHHHHHHHHHHcC
Q psy370           24 QCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        24 ~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      ....|++.|.....|..|+-+|+
T Consensus         5 hfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           5 HFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CSTTCCCEESSHHHHHHHHHHHH
T ss_pred             EecCchHHHhhccceEEEeeccc
Confidence            34679999999999998887664

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.34  E-value=0.082  Score=20.55  Aligned_cols=22  Identities=18%  Similarity=0.297  Sum_probs=14.9

Q ss_pred             ccCCCcccccCCHHHHHHHHHH
Q psy370           23 SQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        23 ~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      |.|..||+...+...+.-|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            6677777777777666666544

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.046  Score=21.10  Aligned_cols=23  Identities=30%  Similarity=0.639  Sum_probs=17.2

Q ss_pred             cCCCcccccCCHHHHHHHHHHcC
Q psy370           24 QCPVCKKIYTDQQLFQNHLETHD   46 (111)
Q Consensus        24 ~c~~C~~~f~~~~~l~~h~~~h~   46 (111)
                      +-.-|++.|.+.+.+..|+-+|.
T Consensus         5 phkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           5 PHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CSTTCCCEESSHHHHHHHHGGGS
T ss_pred             CcccHHHHhhchHHHHHHhhccC
Confidence            34568888888888888876663

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.93  E-value=0.083  Score=20.89  Aligned_cols=19  Identities=21%  Similarity=0.546  Sum_probs=10.2

Q ss_pred             cCcccCCHHHHHHHHHhcc
Q psy370           56 CDMQFNCKSDMRKHVHSHL   74 (111)
Q Consensus        56 c~~~f~~~~~l~~h~~~h~   74 (111)
                      |+-.|.....|..|+..|+
T Consensus        11 C~A~ynk~wkL~AHLckHT   29 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHT   29 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHH
T ss_pred             cchhhccchhhhHHhhhhc
Confidence            4455555555555555554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.62  E-value=0.12  Score=24.46  Aligned_cols=32  Identities=19%  Similarity=0.328  Sum_probs=25.8

Q ss_pred             CccccCcccCCCcccccCCHHHHHHHHHHcCC
Q psy370           16 SYTIFVASQCPVCKKIYTDQQLFQNHLETHDN   47 (111)
Q Consensus        16 ~~~~~~~~~c~~C~~~f~~~~~l~~h~~~h~~   47 (111)
                      ...+...|+|..|...|.....|..|...|.+
T Consensus        12 ~~~~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          12 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             cccCCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            34667789999999999999889888877753

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.92  E-value=0.3  Score=21.46  Aligned_cols=26  Identities=23%  Similarity=0.556  Sum_probs=17.6

Q ss_pred             ccCcccCCCcccccCCHHHHHHHHHH
Q psy370           19 IFVASQCPVCKKIYTDQQLFQNHLET   44 (111)
Q Consensus        19 ~~~~~~c~~C~~~f~~~~~l~~h~~~   44 (111)
                      .+.|-.|+.|+........|..|...
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            34566777777777777777776654

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=87.84  E-value=0.14  Score=21.48  Aligned_cols=11  Identities=36%  Similarity=0.437  Sum_probs=5.8

Q ss_pred             CCceecCCCcc
Q psy370           78 ERGFVCEICGH   88 (111)
Q Consensus        78 ~~~~~C~~C~~   88 (111)
                      +.|-+|+.|+.
T Consensus        18 ~~Pe~CPvCg~   28 (36)
T d1yuza2          18 EDFEKCPICFR   28 (36)
T ss_dssp             SCCSBCTTTCC
T ss_pred             CCCCcCCCCCC
Confidence            34455666653

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.26  E-value=0.16  Score=21.36  Aligned_cols=11  Identities=36%  Similarity=0.842  Sum_probs=5.4

Q ss_pred             CCceecCCCcc
Q psy370           78 ERGFVCEICGH   88 (111)
Q Consensus        78 ~~~~~C~~C~~   88 (111)
                      +.|..|+.|+.
T Consensus        18 ~~P~~CPvCg~   28 (37)
T d1nnqa2          18 EAPEYCPVCGA   28 (37)
T ss_dssp             CCCSBCTTTCC
T ss_pred             CCCCcCCCCCC
Confidence            34445555553

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=0.33  Score=19.77  Aligned_cols=25  Identities=20%  Similarity=0.430  Sum_probs=18.4

Q ss_pred             CCceecCCCccccccchhHHhhccc
Q psy370           78 ERGFVCEICGHVVDEMPVATQSSKY  102 (111)
Q Consensus        78 ~~~~~C~~C~~~~~~~~~l~~h~~~  102 (111)
                      .+-|.|+.|.+-..+...|..|+.-
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHh
Confidence            4567888888888877778777643

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=83.53  E-value=0.25  Score=28.14  Aligned_cols=42  Identities=19%  Similarity=0.313  Sum_probs=28.5

Q ss_pred             CHHHHHHHHHhccCCCCC-----ceecCCCccccccchhHHhhccccC
Q psy370           62 CKSDMRKHVHSHLSMEER-----GFVCEICGHVVDEMPVATQSSKYPG  104 (111)
Q Consensus        62 ~~~~l~~h~~~h~~~~~~-----~~~C~~C~~~~~~~~~l~~h~~~~~  104 (111)
                      ....|..|+....-.|.-     =|+|..||+-..-. .|.+|++.|.
T Consensus       123 LGgrlieHiK~~m~~GqDyvFWQFYKCe~CgKYvDie-~~~~H~k~HG  169 (218)
T d2czra1         123 LGAALVNHIKNNALAGQDYIFWQFYKCEECGKYVDIE-NLEAHLREHG  169 (218)
T ss_dssp             CHHHHHHHHHTTCCBTTTEEEEEEEECTTTCCEEEGG-GHHHHHHTTT
T ss_pred             HhHHHHHHHHhccccCcceEEEEEeehhhcCceecHH-HHHHHHHHcC
Confidence            346777888765321221     25899999977655 5889998875