Psyllid ID: psy3836


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------
MKNPKAPDLLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQYYDLPLDSKLVN
cccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccHHcccHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccc
ccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccHEHccccccHccccHHHHHHHHHHHHHHHHHHHccccccccccc
mknpkapdllknikyEHLLAGVTGGVTSTLILHPLDLLKIRFAvsdgrspnpsynnlsnaVHTIFrqegfkglykgvtpniwgsgsawGFYFLFYNTIKTWIQqgnttkpigptMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYandkvptskrySGMIDALHKIYSvegirglykgfvpgmfgvshgaVQFMVYEEMKSHytqyydlpldsklvn
MKNPKAPDLLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYAndkvptskrysGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTqyydlpldsklvn
MKNPKAPDLLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQYYDLPLDSKLVN
********LLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSD*******YNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQYYDLPL******
****************HLLAGVTGGVTSTLILHPLDLLKIRF***************SNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQ*****KPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRL*****************MIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQ************
MKNPKAPDLLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQYYDLPLDSKLVN
********LLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQYY**********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKNPKAPDLLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQYYDLPLDSKLVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query217 2.2.26 [Sep-21-2011]
Q8BMG8316 Mitochondrial folate tran yes N/A 0.949 0.651 0.526 3e-62
Q9H2D1315 Mitochondrial folate tran yes N/A 0.940 0.647 0.540 6e-61
Q95J75315 Mitochondrial folate tran N/A N/A 0.940 0.647 0.535 1e-60
Q7XA87 308 Folate transporter 1, chl yes N/A 0.847 0.597 0.441 5e-42
P40556373 Mitochondrial nicotinamid yes N/A 0.829 0.482 0.365 3e-26
P40464311 Mitochondrial FAD carrier no N/A 0.811 0.565 0.331 3e-25
O13660277 Uncharacterized mitochond yes N/A 0.778 0.610 0.333 2e-24
Q54FU9329 Mitochondrial substrate c yes N/A 0.815 0.537 0.342 6e-23
O22261312 Nicotinamide adenine dinu no N/A 0.801 0.557 0.369 7e-23
Q8RWA5 363 Nicotinamide adenine dinu no N/A 0.764 0.457 0.375 2e-22
>sp|Q8BMG8|MFTC_MOUSE Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1 Back     alignment and function desciption
 Score =  238 bits (606), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 152/207 (73%), Gaps = 1/207 (0%)

Query: 9   LLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQE 68
           + ++++YE+L+AGV+GGV S L LHPLDL+KIRFAVSDG    P Y  + + + TI++ +
Sbjct: 17  VFRHVRYENLVAGVSGGVLSNLALHPLDLVKIRFAVSDGLEVRPKYKGILHCLATIWKVD 76

Query: 69  GFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTL 128
           G +GLY+GVTPN+WG+G +WG YF FYN IK++  +G   + + P   +V+AAEAG +TL
Sbjct: 77  GLRGLYQGVTPNVWGAGLSWGLYFFFYNAIKSYKTEGRAEQ-LEPLEYLVSAAEAGAMTL 135

Query: 129 VMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSH 188
            +TNP+WV KTRL LQY     P+ ++Y GM DAL KIY  EG+RGLYKGFVPG+FG SH
Sbjct: 136 CITNPLWVTKTRLMLQYGGVASPSQRQYKGMFDALVKIYKYEGVRGLYKGFVPGLFGTSH 195

Query: 189 GAVQFMVYEEMKSHYTQYYDLPLDSKL 215
           GA+QFM YE +K  Y ++ +   +++L
Sbjct: 196 GALQFMAYELLKLKYNKHINRLPEAQL 222




Transports folate across the inner membranes of mitochondria.
Mus musculus (taxid: 10090)
>sp|Q9H2D1|MFTC_HUMAN Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2 Back     alignment and function description
>sp|Q95J75|MFTC_MACFA Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1 Back     alignment and function description
>sp|Q7XA87|FOLT1_ARATH Folate transporter 1, chloroplastic OS=Arabidopsis thaliana GN=FOLT1 PE=2 SV=1 Back     alignment and function description
>sp|P40556|YIA6_YEAST Mitochondrial nicotinamide adenine dinucleotide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIA6 PE=1 SV=1 Back     alignment and function description
>sp|P40464|FLX1_YEAST Mitochondrial FAD carrier protein FLX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLX1 PE=2 SV=1 Back     alignment and function description
>sp|O13660|YBC9_SCHPO Uncharacterized mitochondrial carrier C27B12.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi069 PE=3 SV=1 Back     alignment and function description
>sp|Q54FU9|MCFW_DICDI Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1 Back     alignment and function description
>sp|O22261|NDT1_ARATH Nicotinamide adenine dinucleotide transporter 1, chloroplastic OS=Arabidopsis thaliana GN=NDT1 PE=1 SV=2 Back     alignment and function description
>sp|Q8RWA5|NDT2_ARATH Nicotinamide adenine dinucleotide transporter 2, mitochondrial OS=Arabidopsis thaliana GN=NDT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
158285262 333 AGAP007653-PA [Anopheles gambiae str. PE 0.953 0.621 0.703 4e-86
328698645 332 PREDICTED: mitochondrial folate transpor 0.972 0.635 0.712 4e-85
157114525316 folate carrier protein [Aedes aegypti] g 0.986 0.677 0.672 1e-84
157114527309 folate carrier protein [Aedes aegypti] g 0.986 0.692 0.672 2e-84
357608835317 hypothetical protein KGM_13704 [Danaus p 1.0 0.684 0.654 2e-84
312377457 368 hypothetical protein AND_11250 [Anophele 0.953 0.562 0.701 3e-84
320543705 322 CG8026, isoform D [Drosophila melanogast 0.976 0.658 0.680 1e-83
170053910 339 folate carrier protein [Culex quinquefas 0.949 0.607 0.693 2e-83
195332753 360 GM20618 [Drosophila sechellia] gi|194125 0.976 0.588 0.680 3e-83
195581824 360 GD10092 [Drosophila simulans] gi|1941927 0.976 0.588 0.680 3e-83
>gi|158285262|ref|XP_308217.4| AGAP007653-PA [Anopheles gambiae str. PEST] gi|157019906|gb|EAA04139.4| AGAP007653-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 147/209 (70%), Positives = 180/209 (86%), Gaps = 2/209 (0%)

Query: 10  LKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPN-PSYNNLSNAVHTIFRQE 68
           L ++KYEHL+AG++GGVTSTL+LHPLDL+KIRFAV+DGR+ + P Y  L++A  TIFRQE
Sbjct: 32  LAHVKYEHLVAGISGGVTSTLLLHPLDLIKIRFAVNDGRTASVPQYRGLTSAFMTIFRQE 91

Query: 69  GFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTL 128
           GF+GLYKGVTPN+WGSGSAWGFYF+FYNTIKTWIQ GNT +P+GPT++M+AAAEAG+LTL
Sbjct: 92  GFRGLYKGVTPNMWGSGSAWGFYFMFYNTIKTWIQDGNTAQPLGPTLHMLAAAEAGVLTL 151

Query: 129 VMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSH 188
            MTNP+WVVKTRLCLQ  N++  +S  Y+GM+D L KIY  EGIRGLY+GFVPGMFGVSH
Sbjct: 152 AMTNPIWVVKTRLCLQ-CNERAGSSTGYAGMVDGLTKIYRTEGIRGLYRGFVPGMFGVSH 210

Query: 189 GAVQFMVYEEMKSHYTQYYDLPLDSKLVN 217
           GA+QFM YEEMK+ Y Q+   P+D+KL  
Sbjct: 211 GALQFMTYEEMKNKYNQHRKRPIDAKLTT 239




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328698645|ref|XP_001946218.2| PREDICTED: mitochondrial folate transporter/carrier-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|157114525|ref|XP_001652313.1| folate carrier protein [Aedes aegypti] gi|108877256|gb|EAT41481.1| AAEL006879-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|157114527|ref|XP_001652314.1| folate carrier protein [Aedes aegypti] gi|108877257|gb|EAT41482.1| AAEL006879-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357608835|gb|EHJ66181.1| hypothetical protein KGM_13704 [Danaus plexippus] Back     alignment and taxonomy information
>gi|312377457|gb|EFR24286.1| hypothetical protein AND_11250 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|320543705|ref|NP_724769.2| CG8026, isoform D [Drosophila melanogaster] gi|318068553|gb|AAF58969.2| CG8026, isoform D [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|170053910|ref|XP_001862889.1| folate carrier protein [Culex quinquefasciatus] gi|167874359|gb|EDS37742.1| folate carrier protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|195332753|ref|XP_002033058.1| GM20618 [Drosophila sechellia] gi|194125028|gb|EDW47071.1| GM20618 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|195581824|ref|XP_002080730.1| GD10092 [Drosophila simulans] gi|194192739|gb|EDX06315.1| GD10092 [Drosophila simulans] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query217
FB|FBgn0033391 360 CG8026 [Drosophila melanogaste 0.967 0.583 0.691 8.7e-79
ZFIN|ZDB-GENE-040426-758324 slc25a32a "solute carrier fami 0.940 0.629 0.579 1.6e-61
UNIPROTKB|E1BSF1322 SLC25A32 "Uncharacterized prot 0.972 0.655 0.537 2.7e-61
UNIPROTKB|Q5ZJN5322 SLC25A32 "Uncharacterized prot 0.972 0.655 0.537 2.7e-61
ZFIN|ZDB-GENE-050306-39313 slc25a32b "solute carrier fami 0.963 0.667 0.542 1.9e-60
MGI|MGI:1917156316 Slc25a32 "solute carrier famil 0.926 0.636 0.541 3.5e-59
UNIPROTKB|J9NZI7316 SLC25A32 "Uncharacterized prot 0.921 0.632 0.549 1.2e-58
RGD|1565789316 Slc25a32 "solute carrier famil 0.926 0.636 0.536 1.5e-58
UNIPROTKB|Q9H2D1315 SLC25A32 "Mitochondrial folate 0.917 0.631 0.556 1.9e-58
UNIPROTKB|F1S1D3324 SLC25A32 "Uncharacterized prot 0.926 0.620 0.527 6.6e-58
FB|FBgn0033391 CG8026 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
 Identities = 148/214 (69%), Positives = 179/214 (83%)

Query:     3 NPKAPDLLKNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPN-PSYNNLSNAV 61
             +PK  ++  ++KYEHL+AGV+GGV STLILHPLDL+KIRFAV+DGR+   P Y  LS+A 
Sbjct:    11 SPKKFNVFAHVKYEHLVAGVSGGVVSTLILHPLDLIKIRFAVNDGRTATVPQYRGLSSAF 70

Query:    62 HTIFRQEGFKGLYKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAA 121
              TIFRQEGF+GLYKGVTPN+WGSGS+WG YF+FYNTIKT+IQ GNTT P+GPTMNM+AAA
Sbjct:    71 TTIFRQEGFRGLYKGVTPNVWGSGSSWGLYFMFYNTIKTFIQGGNTTMPLGPTMNMLAAA 130

Query:   122 EAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVP 181
             E+GILTL++TNP+WVVKTRLCLQ   D   +S  Y GMI AL +IY  EGIRGLY+GFVP
Sbjct:   131 ESGILTLLLTNPIWVVKTRLCLQC--DAA-SSAEYRGMIHALGQIYKEEGIRGLYRGFVP 187

Query:   182 GMFGVSHGAVQFMVYEEMKSHYTQYYDLPLDSKL 215
             GM GVSHGA+QFM YEE+K+ Y +Y  LP+D+KL
Sbjct:   188 GMLGVSHGAIQFMTYEELKNAYNEYRKLPIDTKL 221


GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0008517 "folic acid transporter activity" evidence=ISS
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0015884 "folic acid transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
ZFIN|ZDB-GENE-040426-758 slc25a32a "solute carrier family 25, member 32a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BSF1 SLC25A32 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZJN5 SLC25A32 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050306-39 slc25a32b "solute carrier family 25, member 32b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1917156 Slc25a32 "solute carrier family 25, member 32" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|J9NZI7 SLC25A32 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1565789 Slc25a32 "solute carrier family 25 (mitochondrial folate carrier) , member 32" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H2D1 SLC25A32 "Mitochondrial folate transporter/carrier" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S1D3 SLC25A32 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8BMG8MFTC_MOUSENo assigned EC number0.52650.94930.6518yesN/A
Q9H2D1MFTC_HUMANNo assigned EC number0.54060.94000.6476yesN/A
O13660YBC9_SCHPONo assigned EC number0.33330.77880.6101yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-23
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-13
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-09
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 93.5 bits (233), Expect = 6e-25
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 15  YEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLY 74
              LLAG   G  +  + +PLD++K R   S     +  Y  + +    I+++EG +GLY
Sbjct: 6   LASLLAGGIAGAIAATVTYPLDVVKTRLQ-SSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 75  KGVTPNIWGSGSAWGFYFLFYNTIKTWIQ 103
           KG+ PN+     A   YF  Y T+K  + 
Sbjct: 65  KGLLPNLLRVAPAAAIYFGTYETLKKLLL 93


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 217
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0753|consensus317 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753|consensus317 100.0
KOG0760|consensus302 100.0
KOG0757|consensus319 100.0
KOG0762|consensus311 100.0
KOG0760|consensus302 100.0
KOG0768|consensus323 100.0
KOG0758|consensus297 100.0
KOG0754|consensus294 100.0
KOG0757|consensus319 100.0
KOG0759|consensus286 100.0
KOG0758|consensus297 100.0
KOG0759|consensus286 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751|consensus694 100.0
KOG0762|consensus 311 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754|consensus294 100.0
KOG0756|consensus299 100.0
KOG0761|consensus361 100.0
KOG0761|consensus361 99.98
KOG0769|consensus308 99.97
KOG0749|consensus298 99.97
KOG0766|consensus297 99.97
KOG0765|consensus333 99.97
KOG0770|consensus 353 99.97
KOG0036|consensus463 99.96
KOG0767|consensus 333 99.96
KOG0750|consensus304 99.96
KOG0749|consensus298 99.96
KOG0755|consensus320 99.96
KOG0763|consensus301 99.96
KOG0755|consensus320 99.96
KOG0036|consensus463 99.96
KOG0765|consensus333 99.95
KOG0768|consensus323 99.94
KOG0770|consensus353 99.94
KOG0763|consensus301 99.93
KOG0750|consensus304 99.93
KOG0767|consensus333 99.9
KOG0769|consensus308 99.9
KOG0766|consensus297 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
KOG2745|consensus321 99.78
KOG0756|consensus299 99.74
KOG1519|consensus297 99.72
KOG1519|consensus297 99.69
KOG0751|consensus 694 99.61
KOG2745|consensus321 99.5
KOG2954|consensus427 99.19
KOG2954|consensus427 98.71
>KOG0764|consensus Back     alignment and domain information
Probab=100.00  E-value=1.5e-43  Score=270.77  Aligned_cols=201  Identities=52%  Similarity=0.932  Sum_probs=184.3

Q ss_pred             hHHHHHHHhHHHHHHHHhhccHHHHHHHHHhcCCC-CCCCCCCcHHHHHHHHHHhhchhhhcccchhhhhccccchhHHH
Q psy3836          14 KYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGR-SPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFYF   92 (217)
Q Consensus        14 ~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~-~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~   92 (217)
                      ...+.++|.++|+++.+++||+|++|+|+|++... .....|++.++++++|++.||+||||+|+.|.+++..+.|++||
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF   84 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYF   84 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHH
Confidence            34566999999999999999999999999998442 45788999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHhHhhhcccHHHHHHHHhhhccCCCCCCCCCCCcHHHHHHHHHHhhCc
Q psy3836          93 LFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGI  172 (217)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~  172 (217)
                      .+||..|.++.+..+....+...++.+++.||+++.++|+|+.++|+|++.+....   ....|++.++++++|+++||+
T Consensus        85 ~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~---~~~~Y~~~f~a~rki~k~EG~  161 (299)
T KOG0764|consen   85 FFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV---QSTAYKGMFDALRKIYKEEGF  161 (299)
T ss_pred             HHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc---cccccccHHHHHHHHHHHHhH
Confidence            99999999997766455568999999999999999999999999999999987763   356899999999999999999


Q ss_pred             ccccccccccccccccchhhHHhHHHHHHHHhhhcCCCCCCcccC
Q psy3836         173 RGLYKGFVPGMFGVSHGAVQFMVYEEMKSHYTQYYDLPLDSKLVN  217 (217)
Q Consensus       173 ~gly~G~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~  217 (217)
                      +|||+|++|.++-+.+.++.|.+||.+|.++.++.+...+++++|
T Consensus       162 rgLY~GlVP~L~GvshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n  206 (299)
T KOG0764|consen  162 RGLYKGLVPGLLGVSHGAIQFPAYEELKLRKNRKQGRSTDNHLSN  206 (299)
T ss_pred             HHHHhhhhhHhhhhchhhhhhhhHHHHHHHHHHhcCCCcccchhh
Confidence            999999999999999999999999999999999888888877654



>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-16
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 4e-04
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-11
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 87/194 (44%), Gaps = 9/194 (4%) Query: 16 EHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYK 75 LLAG T G + + P D++K+RF Y + A TI R+EG +GL+K Sbjct: 106 SRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWK 165 Query: 76 GVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVW 135 G +PN+ + + Y+ IK + + N P + +A AG T V+ +PV Sbjct: 166 GTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPC-HFTSAFGAGFCTTVIASPVD 224 Query: 136 VVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGV-SHGAVQFM 194 VVKTR Y N + +Y + EG R YKGF+P + S V F+ Sbjct: 225 VVKTR----YMNSAL---GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFV 277 Query: 195 VYEEMKSHYTQYYD 208 YE++K Y Sbjct: 278 TYEQLKRALMAAYQ 291
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query217
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-44
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-41
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-15
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-41
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-41
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-15
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-10
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  148 bits (376), Expect = 3e-44
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 6/187 (3%)

Query: 15  YEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPS-YNNLSNAVHTIFRQEGFKGL 73
             +L +G   G TS   ++PLD  + R A   G+      +  L N +  IF+ +G +GL
Sbjct: 113 AGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGL 172

Query: 74  YKGVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNP 133
           Y+G   ++ G       YF  Y+T K  +            ++ + A     +  +++ P
Sbjct: 173 YQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNV---HIIVSWMIAQTVTAVAGLVSYP 229

Query: 134 VWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQF 193
              V+ R+ +Q           Y+G +D   KI   EG +  +KG    +     GA   
Sbjct: 230 FDTVRRRMMMQSGRKGADI--MYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVL 287

Query: 194 MVYEEMK 200
           ++Y+E+K
Sbjct: 288 VLYDEIK 294


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query217
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.9e-40  Score=268.62  Aligned_cols=188  Identities=30%  Similarity=0.415  Sum_probs=170.1

Q ss_pred             hhhHHHHHHHhHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhhchhhhcccchhhhhccccchhHH
Q psy3836          12 NIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWGFY   91 (217)
Q Consensus        12 ~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~   91 (217)
                      .+....+++|++|++++.++++|+|+||+|+|++........|++.++++++|+++||++|||||+.+.+++.++..+++
T Consensus       102 ~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~  181 (303)
T 2lck_A          102 AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAE  181 (303)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999987543456799999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHhHhhhcccHHHHHHHHhhhccCCCCCCCCCCCcHHHHHHHHHHhhC
Q psy3836          92 FLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEG  171 (217)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G  171 (217)
                      |.+||.+++.+.+.. ....+....+++|++||++++++++|+|+||+|||++.       ...|.++++|+++|+++||
T Consensus       182 f~~ye~~k~~l~~~~-~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~-------~~~y~~~~~~~~~i~~~eG  253 (303)
T 2lck_A          182 LVTYDLIKDTLLKAN-LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSA-------LGQYHSAGHCALTMLRKEG  253 (303)
T ss_dssp             HHHHHHHHHTTTTTT-SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-------SSSCCSHHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHHhcc-CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc-------ccccCCHHHHHHHHHHHcC
Confidence            999999999886543 33456778899999999999999999999999999863       3469999999999999999


Q ss_pred             ccccccccccccc-ccccchhhHHhHHHHHHHHhhhc
Q psy3836         172 IRGLYKGFVPGMF-GVSHGAVQFMVYEEMKSHYTQYY  207 (217)
Q Consensus       172 ~~gly~G~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~  207 (217)
                      ++|||||+.|+++ .+|.+++.|.+||.+++.+.+..
T Consensus       254 ~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~  290 (303)
T 2lck_A          254 PRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAY  290 (303)
T ss_dssp             THHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             hHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999 99999999999999998776544



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 217
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-23
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-20
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 9e-09
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 92.9 bits (229), Expect = 2e-23
 Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 6/184 (3%)

Query: 17  HLLAGVTGGVTSTLILHPLDLLKIR-FAVSDGRSPNPSYNNLSNAVHTIFRQEGFKGLYK 75
           +L +G   G TS   ++PLD  + R  A     +    +  L N +  IF+ +G +GLY+
Sbjct: 114 NLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQ 173

Query: 76  GVTPNIWGSGSAWGFYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVW 135
           G   ++ G       YF  Y+T K  +        I   M          +  +++ P  
Sbjct: 174 GFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTV---TAVAGLVSYPFD 230

Query: 136 VVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSVEGIRGLYKGFVPGMFGVSHGAVQFMV 195
            V+ R+ +Q  + +      Y+G +D   KI   EG +  +KG    +     GA   ++
Sbjct: 231 TVRRRMMMQ--SGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVL 288

Query: 196 YEEM 199
           Y+E+
Sbjct: 289 YDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query217
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=2.3e-34  Score=229.49  Aligned_cols=183  Identities=25%  Similarity=0.444  Sum_probs=160.3

Q ss_pred             chhhHHHHHHHhHHHHHHHHhhccHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHhhchhhhcccchhhhhccccchh
Q psy3836          11 KNIKYEHLLAGVTGGVTSTLILHPLDLLKIRFAVSDG-RSPNPSYNNLSNAVHTIFRQEGFKGLYKGVTPNIWGSGSAWG   89 (217)
Q Consensus        11 ~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~~~q~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~   89 (217)
                      .......+++|.+|++++.++.+|+|++|+|+|++.. ......+.+.++.+++++++||+++||+|+.+++++++++.+
T Consensus       108 ~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~  187 (292)
T d1okca_         108 WRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRA  187 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhccchhhhhccccccccceehHhh
Confidence            3344678899999999999999999999999999875 334567889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCCCCChHHHHHHHHHHHHhHhhhcccHHHHHHHHhhhccCCCCCCCCCCCcHHHHHHHHHHh
Q psy3836          90 FYFLFYNTIKTWIQQGNTTKPIGPTMNMVAAAEAGILTLVMTNPVWVVKTRLCLQYANDKVPTSKRYSGMIDALHKIYSV  169 (217)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~q~~~~~~~~~~~~~~~~~~~~~~~i~~~  169 (217)
                      ++|.+||.+++.+.+.   ........++++.+++++++++++|+|+||+|||.+....  .....|.++++++++++++
T Consensus       188 ~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~--~~~~~y~~~~~~~~~i~~~  262 (292)
T d1okca_         188 AYFGVYDTAKGMLPDP---KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRK--GADIMYTGTVDCWRKIAKD  262 (292)
T ss_dssp             HHHHHHHHHHHSSCGG---GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC--GGGCSCSSHHHHHHHHHHH
T ss_pred             hhhhhccchhhhcccc---cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHh
Confidence            9999999999876443   3456778899999999999999999999999999976542  1345799999999999999


Q ss_pred             hCccccccccccccc-ccccchhhHHhHHHH
Q psy3836         170 EGIRGLYKGFVPGMF-GVSHGAVQFMVYEEM  199 (217)
Q Consensus       170 ~G~~gly~G~~~~~~-~~~~~~~~~~~y~~~  199 (217)
                      ||++|||||+.|+++ .++ +++.|.+||.+
T Consensus       263 eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         263 EGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             cCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            999999999999999 655 68889999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure