Psyllid ID: psy4649

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-----

MSWFRNQASNSHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAVFPDLEVEDDDTDSGYGGRFSYPRPYSEPPSPSSSRATTPVPSQRNSDDEDSVDDESERAPVPSQRNSDDEDSVDDESERAELNLPR

cccccccccccccccEEEEEHHHHHHccccEEEEEcccHHHHHHHHcccEEEEcccccccccccEEEcccccccHHHHHHHHHHHcccEEEEEEEEEccccEEEEEEcccHHcHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHccccccEEEEEEccccHHHHccccccccccccccccHHHHHHcccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHccccccccccEEEEEEccccccccccccccHHHHHHccccccccccccccccHHHHHHHccccccccccccHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccc

cccccccccccccccEEEHHHHHHHHHcccEEEEEEcccccHHHHHcccEEEEccccccccccccccccccccHHHHHHHHHHHHcccEEEEEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHcccccHHHHHHHccccHHHHHcccccHHHHHHHHHHHccHHccHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHccccccEEEcccccccccHHHHHHHHHcccccccccEEEEEcccccccccccccccHHHHHccccccccccccccccccccEEEEcccccEccccccHHHHHHHHHcccHHccEEEEEcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccEEccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccc

mswfrnqasnshqnrWVFESAWEVANKVGGIYTVIRSKAfvsseelgnqyvllgpykeqsarteveevefmngspLQIAVDKMREHGFKLHvgnwlvdgnpqiiLFDIGSAAWKMDEYKQELWstcslgvphldieandAIILGHMVATFIAEFEKvahnefgppkiitHFHEWQAGIGLIALrtrkvpvatvFTTHATLLGRYLCagntdfynnlstfdvdfeagrRQIYHRYCMERAASHLAHVFTTVSEITGYEAEhllkrkpevitpnglnvvKFSAIHEFQNLHARAKEKINEFvrghfyghydfnldkTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFptktnnfnveslrghAVTKSLRDTINEIQGKMSNMSKRIYETClmgrmptedefftkeDKTRIKRCLYALqryslppvtthnviddwndpvlcafrrchlfnsvhdrvkvifhpeflsstnplfgldyeefvrgchlgvfpsyyepwgytpaectvmgipsittnlsgfgcfmeehiadptsygiyiVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAvfpdlevedddtdsgyggrfsyprpyseppspsssrattpvpsqrnsddedsvddeserapvpsqrnsddedsvddeseraelnlpr

mswfrnqasnshqnrwVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTktnnfnveslrghavtksLRDTINEiqgkmsnmSKRIYETCLMGrmptedefftkedKTRIKRCLYALQryslppvtthnvIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMYdfttlnrrqriiqrnrterlsdlldwrnLGVYYKQARKLAQYMYDfttlnrrqriiqrnrterlsdlldwrNLGVYYKQARNKALKAVFPDLEARNKALkavfpdlevedddtdsgyggrfsyprpyseppspsssrattpvpsqrnsddedsvddeserapvpsqrnsddedsvddeseraelnlpr

MSWFRNQASNSHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMYDFTTLnrrqriiqrnrTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLnrrqriiqrnrTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAVFPDLEVEDDDTDSGYGGRFsyprpyseppspsssrattpvpsQRNsddedsvddeseRAPVPSQRNsddedsvddeseRAELNLPR

*************NRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKE******VEEVEFMNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQG****MSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAVFPD***********************************************************************************

*************NRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTT**************************VYYKQARNKALKAVFPDLEARNKALKAVFPDLEVEDD*****************************************************************************

************QNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAVFPDLEVEDDDTDSGYGGRFSYPR***************************************************************

*****NQASNSHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAVFPDLEVEDDDTDSGYGGRFSYPRPYS**************************************************S**A******

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		755	2.2.26 [Sep-21-2011]
Q9VFC8		709	Putative glycogen [starch	yes	N/A	0.862	0.918	0.669	0.0
P13834		735	Glycogen [starch] synthas	yes	N/A	0.874	0.897	0.554	0.0
Q8MJ26		737	Glycogen [starch] synthas	yes	N/A	0.874	0.895	0.553	0.0
P13807		737	Glycogen [starch] synthas	yes	N/A	0.874	0.895	0.551	0.0
A2RRU1		738	Glycogen [starch] synthas	yes	N/A	0.888	0.909	0.549	0.0
Q9Z1E4		738	Glycogen [starch] synthas	yes	N/A	0.859	0.879	0.562	0.0
Q9U2D9		672	Probable glycogen [starch	yes	N/A	0.784	0.880	0.611	0.0
A7MB78		736	Glycogen [starch] synthas	yes	N/A	0.849	0.870	0.561	0.0
Q5R9H0		737	Glycogen [starch] synthas	yes	N/A	0.874	0.895	0.547	0.0
P54840		703	Glycogen [starch] synthas	no	N/A	0.765	0.822	0.619	0.0

>sp\|Q9VFC8\|GYS_DROME Putative glycogen [starch] synthase OS=Drosophila melanogaster GN=CG6904 PE=1 SV=2	Back alignment and function desciption

 Score =  986 bits (2548), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/723 (66%), Positives = 556/723 (76%), Gaps = 72/723 (9%)

Query: 11  SHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEF 70
           S +NRW FE AWEVANKVGGIYTVIRSKA+VS+EE+G Q  ++GPYKE  ARTE+EE+EF
Sbjct: 45  SRENRWNFEVAWEVANKVGGIYTVIRSKAYVSTEEMGEQLCMMGPYKEHCARTEMEEMEF 104

Query: 71  MNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGV 130
             G+PL  AV+ +R  G+K+H G WLVDGNPQ+ILFDIGSAAWK+D++K E+W  C +G+
Sbjct: 105 PRGNPLLDAVNSLRSRGYKIHTGRWLVDGNPQLILFDIGSAAWKLDQFKSEMWEKCHIGI 164

Query: 131 PHLDIEANDAIILGHMVATFIAEFEKVA-----HNEFGPPKIITHFHEWQAGIGLIALRT 185
           PHLDIE NDAIILG M+A F+ EF   A     +NE   P+I+ HFHEWQAG+GLI LRT
Sbjct: 165 PHLDIETNDAIILGFMIAEFLEEFRNFAVTYSQNNELSAPRIVAHFHEWQAGVGLIVLRT 224

Query: 186 RKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAH 245
           R V +ATVFTTHATLLGRYLCAGNTDFYNNL  F VD EAG+RQIYHRYC+ER A+HLAH
Sbjct: 225 RLVEIATVFTTHATLLGRYLCAGNTDFYNNLDKFAVDEEAGKRQIYHRYCLERGATHLAH 284

Query: 246 VFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFY 305
           VFTTVSEITGYEAEHLLKRKP++ITPNGLNV KFSAIHEFQNLHA AKEKINEFVRGHFY
Sbjct: 285 VFTTVSEITGYEAEHLLKRKPDIITPNGLNVKKFSAIHEFQNLHAVAKEKINEFVRGHFY 344

Query: 306 GHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTN 365
           GH DF+LDKTLYFF AGRYEF NKGAD+FIE+LARLN  LK    D TVVAFLIFPTKTN
Sbjct: 345 GHIDFDLDKTLYFFIAGRYEFGNKGADIFIEALARLNAMLKHEKPDTTVVAFLIFPTKTN 404

Query: 366 NFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKR 425
           NFNV+SLRGHAV K LRDTIN +Q     + KR+++TCL G +P  D+   K+D  +IKR
Sbjct: 405 NFNVDSLRGHAVIKQLRDTINNVQ---QAVGKRMFDTCLQGNIPNADDLLQKDDLVKIKR 461

Query: 426 CLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFG 485
           C++A+QR S+PPVTTHNV DDWNDPVL + RRCHLFNS HDRVK++FHPEFL+STNPLFG
Sbjct: 462 CMFAMQRDSMPPVTTHNVADDWNDPVLSSIRRCHLFNSRHDRVKMVFHPEFLTSTNPLFG 521

Query: 486 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGI 545
           +DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPS+TTNLSGFGCFMEEHI+DP SYGI
Sbjct: 522 IDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHISDPKSYGI 581

Query: 546 YIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARK 605
           YIVDRR I LE S++QL+ +M +F+ LNRRQRIIQRNRTERLSDLLDWR LG+YY+QAR 
Sbjct: 582 YIVDRRYIGLENSVQQLSSFMMEFSRLNRRQRIIQRNRTERLSDLLDWRTLGIYYRQARV 641

Query: 606 LAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKA 665
                                                       KAL+AV+PD       
Sbjct: 642 --------------------------------------------KALQAVYPDYV----- 652

Query: 666 LKAVFPDLEVEDDDTDSGYGGR--FSYPRPYSEPPSPSSSRATTPVPSQRNSDDEDSVDD 723
                        D  S YG +    + RP+SEPPSP+SSR TTP PS   SDDEDSVD+
Sbjct: 653 -------------DELSLYGSKNNLIFSRPHSEPPSPTSSRHTTPAPSVHGSDDEDSVDE 699

Query: 724 ESE 726
           E+E
Sbjct: 700 ETE 702

Transfers the glycosyl residue from UDPG to the non-reducing end of alpha-1,4-glucan.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 1

>sp\|P13834\|GYS1_RABIT Glycogen [starch] synthase, muscle OS=Oryctolagus cuniculus GN=GYS1 PE=1 SV=4	Back alignment and function description

>sp\|Q8MJ26\|GYS1_MACMU Glycogen [starch] synthase, muscle OS=Macaca mulatta GN=GYS1 PE=2 SV=1	Back alignment and function description

>sp\|P13807\|GYS1_HUMAN Glycogen [starch] synthase, muscle OS=Homo sapiens GN=GYS1 PE=1 SV=2	Back alignment and function description

>sp\|A2RRU1\|GYS1_RAT Glycogen [starch] synthase, muscle OS=Rattus norvegicus GN=Gys1 PE=2 SV=1	Back alignment and function description

>sp\|Q9Z1E4\|GYS1_MOUSE Glycogen [starch] synthase, muscle OS=Mus musculus GN=Gys1 PE=1 SV=2	Back alignment and function description

>sp\|Q9U2D9\|GYS_CAEEL Probable glycogen [starch] synthase OS=Caenorhabditis elegans GN=gsy-1 PE=3 SV=1	Back alignment and function description

>sp\|A7MB78\|GYS1_BOVIN Glycogen [starch] synthase, muscle OS=Bos taurus GN=GYS1 PE=2 SV=1	Back alignment and function description

>sp\|Q5R9H0\|GYS1_PONAB Glycogen [starch] synthase, muscle OS=Pongo abelii GN=GYS1 PE=2 SV=1	Back alignment and function description

>sp\|P54840\|GYS2_HUMAN Glycogen [starch] synthase, liver OS=Homo sapiens GN=GYS2 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		755
307207332		1013	Putative glycogen [starch] synthase [Har	0.847	0.631	0.696	0.0
223036832		694	glycogen synthase [Locusta migratoria]	0.856	0.932	0.693	0.0
291278040		669	glycogen synthase [Spodoptera exigua]	0.855	0.965	0.683	0.0
195390029		710	GJ23225 [Drosophila virilis] gi\|19415175	0.872	0.928	0.667	0.0
307183486		696	Putative glycogen [starch] synthase [Cam	0.847	0.919	0.700	0.0
158290788		692	AGAP002586-PA [Anopheles gambiae str. PE	0.871	0.950	0.698	0.0
380014313		692	PREDICTED: putative glycogen [starch] sy	0.785	0.856	0.785	0.0
357613861		753	glycogen synthase [Danaus plexippus]	0.846	0.848	0.681	0.0
194742160		709	GF17161 [Drosophila ananassae] gi\|190626	0.864	0.921	0.671	0.0
66549280		692	PREDICTED: putative glycogen [starch] sy	0.785	0.856	0.783	0.0

>gi\|307207332\|gb\|EFN85082.1\| Putative glycogen [starch] synthase [Harpegnathos saltator]	Back alignment and taxonomy information

 Score = 1005 bits (2598), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/705 (69%), Positives = 557/705 (79%), Gaps = 65/705 (9%)

Query: 12  HQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFM 71
           ++NRW FE AWE ANKVGGIYTVIRSKA+VS+EE+G+QY L+GPYKE SARTEVEE +F+
Sbjct: 31  NENRWNFEVAWEAANKVGGIYTVIRSKAYVSTEEMGDQYCLIGPYKETSARTEVEESDFL 90

Query: 72  NGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVP 131
             +PL   V KMR+ G+K+  G WLVDGNPQIILFDIGSAAWK+DEYKQELW TC  G+P
Sbjct: 91  PHNPLNQTVQKMRDQGYKVITGTWLVDGNPQIILFDIGSAAWKLDEYKQELWDTCHFGIP 150

Query: 132 HLDIEANDAIILGHMVATFIAEFEKVAHNEFG-PPKIITHFHEWQAGIGLIALRTRKVPV 190
           HLDIEANDA+I G+++  FIAEF K A       P+++ H HEWQAG+GLIALRTR V V
Sbjct: 151 HLDIEANDAVIFGYLICQFIAEFRKAAEGYSSIAPRVVVHCHEWQAGVGLIALRTRHVDV 210

Query: 191 ATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTV 250
           ATVFTTHATLLGRYLCAG TDFYNNL  F VD EAG+RQIYHRYCMERAA+HLAHVFTTV
Sbjct: 211 ATVFTTHATLLGRYLCAGKTDFYNNLDKFSVDEEAGKRQIYHRYCMERAATHLAHVFTTV 270

Query: 251 SEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDF 310
           S+ITG+EAEHLLKRKP++ITPNGLNV KF+A+HEFQNLHA +KEKI+EFVRGHFYGHYDF
Sbjct: 271 SDITGFEAEHLLKRKPDIITPNGLNVKKFAALHEFQNLHAISKEKIHEFVRGHFYGHYDF 330

Query: 311 NLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVE 370
           +LDKTLYFF AGRYEF NKGAD+FIE+LARLNHYLK +  D+TVVAFLIFP +TNNFNVE
Sbjct: 331 DLDKTLYFFIAGRYEFGNKGADIFIEALARLNHYLKTSRPDLTVVAFLIFPARTNNFNVE 390

Query: 371 SLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYAL 430
           SLRGHAVTKSLRDTIN+IQ K   + KR+YE CL GRMP  ++   KED  +IKRCLYAL
Sbjct: 391 SLRGHAVTKSLRDTINDIQQK---IGKRMYELCLSGRMPEAEDLLQKEDTIKIKRCLYAL 447

Query: 431 QRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEE 490
           QR  LPP+TTHNVIDD+NDPVL + RRC+LFN+VHDRVK++FHPEFLSSTNPLFGLDYEE
Sbjct: 448 QRNGLPPITTHNVIDDYNDPVLNSIRRCNLFNTVHDRVKIVFHPEFLSSTNPLFGLDYEE 507

Query: 491 FVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDR 550
           FVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFM+EHIADP SYGIYIVDR
Sbjct: 508 FVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMQEHIADPMSYGIYIVDR 567

Query: 551 RNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYM 610
           R I+LE S++QLAQYM+DF  L+RRQRIIQRNRTERLSDLLDWRNLG+YY+QAR      
Sbjct: 568 RFISLENSVQQLAQYMFDFARLSRRQRIIQRNRTERLSDLLDWRNLGIYYRQARI----- 622

Query: 611 YDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAVF 670
                                                  KAL  V+P+L++         
Sbjct: 623 ---------------------------------------KALITVYPELQS--------- 634

Query: 671 PDLEVEDDDTDSGYGGRFSYPRPYSEPPSPSSSRATTPVPSQRNS 715
                   +   G  GRF+YPRP SEPPSP SSR TTP  S   S
Sbjct: 635 --------EYAEGGVGRFTYPRPISEPPSPLSSRHTTPAASVHGS 671

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom:

>gi\|223036832\|gb\|ACM78946.1\| glycogen synthase [Locusta migratoria]	Back alignment and taxonomy information

>gi\|291278040\|gb\|ADA53796.1\| glycogen synthase [Spodoptera exigua]	Back alignment and taxonomy information

>gi\|195390029\|ref\|XP_002053671.1\| GJ23225 [Drosophila virilis] gi\|194151757\|gb\|EDW67191.1\| GJ23225 [Drosophila virilis]	Back alignment and taxonomy information

>gi\|307183486\|gb\|EFN70285.1\| Putative glycogen [starch] synthase [Camponotus floridanus]	Back alignment and taxonomy information

>gi\|158290788\|ref\|XP_312352.3\| AGAP002586-PA [Anopheles gambiae str. PEST] gi\|157018065\|gb\|EAA08045.3\| AGAP002586-PA [Anopheles gambiae str. PEST]	Back alignment and taxonomy information

>gi\|380014313\|ref\|XP_003691183.1\| PREDICTED: putative glycogen [starch] synthase-like [Apis florea]	Back alignment and taxonomy information

>gi\|357613861\|gb\|EHJ68750.1\| glycogen synthase [Danaus plexippus]	Back alignment and taxonomy information

>gi\|194742160\|ref\|XP_001953574.1\| GF17161 [Drosophila ananassae] gi\|190626611\|gb\|EDV42135.1\| GF17161 [Drosophila ananassae]	Back alignment and taxonomy information

>gi\|66549280\|ref\|XP_624707.1\| PREDICTED: putative glycogen [starch] synthase-like [Apis mellifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		755
FB\|FBgn0038293		709	CG6904 [Drosophila melanogaste	0.792	0.843	0.723	6.4e-250
UNIPROTKB\|P13834		735	GYS1 "Glycogen [starch] syntha	0.778	0.8	0.618	7.9e-216
MGI\|MGI:101805		738	Gys1 "glycogen synthase 1, mus	0.777	0.795	0.617	1.3e-215
RGD\|1589798		738	Gys1 "glycogen synthase 1, mus	0.777	0.795	0.615	1.6e-215
UNIPROTKB\|F1RIP1		737	GYS1 "Uncharacterized protein"	0.778	0.797	0.618	3.4e-215
UNIPROTKB\|P13807		737	GYS1 "Glycogen [starch] syntha	0.778	0.797	0.615	4.4e-215
UNIPROTKB\|A7MB78		736	GYS1 "Glycogen [starch] syntha	0.778	0.798	0.613	1.2e-214
UNIPROTKB\|Q8MJ26		737	GYS1 "Glycogen [starch] syntha	0.778	0.797	0.615	1.5e-214
UNIPROTKB\|Q5R9H0		737	GYS1 "Glycogen [starch] syntha	0.778	0.797	0.613	3.5e-213
ZFIN\|ZDB-GENE-040426-1243		700	gys1 "glycogen synthase 1 (mus	0.773	0.834	0.607	4.4e-213

FB\|FBgn0038293 CG6904 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 2407 (852.4 bits), Expect = 6.4e-250, P = 6.4e-250
 Identities = 439/607 (72%), Positives = 504/607 (83%)

Query:    11 SHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEF 70
             S +NRW FE AWEVANKVGGIYTVIRSKA+VS+EE+G Q  ++GPYKE  ARTE+EE+EF
Sbjct:    45 SRENRWNFEVAWEVANKVGGIYTVIRSKAYVSTEEMGEQLCMMGPYKEHCARTEMEEMEF 104

Query:    71 MNGSPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGV 130
               G+PL  AV+ +R  G+K+H G WLVDGNPQ+ILFDIGSAAWK+D++K E+W  C +G+
Sbjct:   105 PRGNPLLDAVNSLRSRGYKIHTGRWLVDGNPQLILFDIGSAAWKLDQFKSEMWEKCHIGI 164

Query:   131 PHLDIEANDAIILGHMVATFIAEFEKVA-----HNEFGPPKIITHFHEWQAGIGLIALRT 185
             PHLDIE NDAIILG M+A F+ EF   A     +NE   P+I+ HFHEWQAG+GLI LRT
Sbjct:   165 PHLDIETNDAIILGFMIAEFLEEFRNFAVTYSQNNELSAPRIVAHFHEWQAGVGLIVLRT 224

Query:   186 RKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAH 245
             R V +ATVFTTHATLLGRYLCAGNTDFYNNL  F VD EAG+RQIYHRYC+ER A+HLAH
Sbjct:   225 RLVEIATVFTTHATLLGRYLCAGNTDFYNNLDKFAVDEEAGKRQIYHRYCLERGATHLAH 284

Query:   246 VFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFY 305
             VFTTVSEITGYEAEHLLKRKP++ITPNGLNV KFSAIHEFQNLHA AKEKINEFVRGHFY
Sbjct:   285 VFTTVSEITGYEAEHLLKRKPDIITPNGLNVKKFSAIHEFQNLHAVAKEKINEFVRGHFY 344

Query:   306 GHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTN 365
             GH DF+LDKTLYFF AGRYEF NKGAD+FIE+LARLN  LK    D TVVAFLIFPTKTN
Sbjct:   345 GHIDFDLDKTLYFFIAGRYEFGNKGADIFIEALARLNAMLKHEKPDTTVVAFLIFPTKTN 404

Query:   366 NFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKR 425
             NFNV+SLRGHAV K LRDTIN +Q     + KR+++TCL G +P  D+   K+D  +IKR
Sbjct:   405 NFNVDSLRGHAVIKQLRDTINNVQ---QAVGKRMFDTCLQGNIPNADDLLQKDDLVKIKR 461

Query:   426 CLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFG 485
             C++A+QR S+PPVTTHNV DDWNDPVL + RRCHLFNS HDRVK++FHPEFL+STNPLFG
Sbjct:   462 CMFAMQRDSMPPVTTHNVADDWNDPVLSSIRRCHLFNSRHDRVKMVFHPEFLTSTNPLFG 521

Query:   486 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGI 545
             +DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPS+TTNLSGFGCFMEEHI+DP SYGI
Sbjct:   522 IDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHISDPKSYGI 581

Query:   546 YIVDRRNIALEESIRQLAQYMYDFTTLXXXXXXXXXXXTERLSDLLDWRNLGVYYKQAR- 604
             YIVDRR I LE S++QL+ +M +F+ L           TERLSDLLDWR LG+YY+QAR 
Sbjct:   582 YIVDRRYIGLENSVQQLSSFMMEFSRLNRRQRIIQRNRTERLSDLLDWRTLGIYYRQARV 641

Query:   605 KLAQYMY 611
             K  Q +Y
Sbjct:   642 KALQAVY 648

GO:0005978 "glycogen biosynthetic process" evidence=IEA;NAS

GO:0004373 "glycogen (starch) synthase activity" evidence=IEA;NAS

UNIPROTKB\|P13834 GYS1 "Glycogen [starch] synthase, muscle" [Oryctolagus cuniculus (taxid:9986)]	Back alignment and assigned GO terms

MGI\|MGI:101805 Gys1 "glycogen synthase 1, muscle" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|1589798 Gys1 "glycogen synthase 1, muscle" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RIP1 GYS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|P13807 GYS1 "Glycogen [starch] synthase, muscle" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|A7MB78 GYS1 "Glycogen [starch] synthase, muscle" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8MJ26 GYS1 "Glycogen [starch] synthase, muscle" [Macaca mulatta (taxid:9544)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5R9H0 GYS1 "Glycogen [starch] synthase, muscle" [Pongo abelii (taxid:9601)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040426-1243 gys1 "glycogen synthase 1 (muscle)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9Z1E4	GYS1_MOUSE	2, ., 4, ., 1, ., 1, 1	0.5628	0.8596	0.8794	yes	N/A
A2RRU1	GYS1_RAT	2, ., 4, ., 1, ., 1, 1	0.5491	0.8887	0.9092	yes	N/A
Q9U2D9	GYS_CAEEL	2, ., 4, ., 1, ., 1, 1	0.6119	0.7841	0.8809	yes	N/A
P13807	GYS1_HUMAN	2, ., 4, ., 1, ., 1, 1	0.5519	0.8741	0.8955	yes	N/A
Q55GH4	GYS_DICDI	2, ., 4, ., 1, ., 1, 1	0.5361	0.7642	0.6571	yes	N/A
A7MB78	GYS1_BOVIN	2, ., 4, ., 1, ., 1, 1	0.5611	0.8490	0.8709	yes	N/A
P13834	GYS1_RABIT	2, ., 4, ., 1, ., 1, 1	0.5546	0.8741	0.8979	yes	N/A
P23337	GYS1_YEAST	2, ., 4, ., 1, ., 1, 1	0.5658	0.7788	0.8305	yes	N/A
Q9VFC8	GYS_DROME	2, ., 4, ., 1, ., 1, 1	0.6694	0.8622	0.9181	yes	N/A
Q8MJ26	GYS1_MACMU	2, ., 4, ., 1, ., 1, 1	0.5532	0.8741	0.8955	yes	N/A
Q5R9H0	GYS1_PONAB	2, ., 4, ., 1, ., 1, 1	0.5478	0.8741	0.8955	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.11	0.946
3rd Layer	2.4.1	0.963

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		755
cd03793		590	cd03793, GT1_Glycogen_synthase_GSY2_like, Glycogen	0.0
pfam05693		633	pfam05693, Glycogen_syn, Glycogen synthase	0.0
cd03801		374	cd03801, GT1_YqgM_like, This family is most closel	9e-08
cd01635		229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	2e-06
pfam00534		158	pfam00534, Glycos_transf_1, Glycosyl transferases	7e-05
cd03801		374	cd03801, GT1_YqgM_like, This family is most closel	4e-04
cd03791		476	cd03791, GT1_Glycogen_synthase_DULL1_like, This fa	5e-04
COG0438		381	COG0438, RfaG, Glycosyltransferase [Cell envelope	0.001
TIGR02095		473	TIGR02095, glgA, glycogen/starch synthase, ADP-glu	0.002
TIGR04157		406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	0.003

>gnl\|CDD\|99967 cd03793, GT1_Glycogen_synthase_GSY2_like, Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis	Back alignment and domain information

 Score = 1113 bits (2881), Expect = 0.0
 Identities = 421/594 (70%), Positives = 488/594 (82%), Gaps = 7/594 (1%)

Query: 14  NRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNG 73
           NR +FE AWEVANKVGGIYTVI+SKA V+ EE G++Y L+GPY E  ARTEVE +E  N 
Sbjct: 1   NRLLFEVAWEVANKVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNP 60

Query: 74  SPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHL 133
             L+ A+D+MR  G K+H G WL++G P+++LFDIGSAAWK+DE+K ELW  C +G P  
Sbjct: 61  -ALRQALDRMRSRGIKVHFGRWLIEGYPKVVLFDIGSAAWKLDEWKGELWELCGIGSPEG 119

Query: 134 DIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATV 193
           D E NDAII G +VA F+ EF   A      P ++ HFHEWQAG+GL  LR RKV V+T+
Sbjct: 120 DRETNDAIIFGFLVAWFLGEF---AEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTI 176

Query: 194 FTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVFTTVSEI 253
           FTTHATLLGRYLCAGN DFYNNL  FDVD EAG+R IYHRYC+ERAA+H AHVFTTVSEI
Sbjct: 177 FTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEI 236

Query: 254 TGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLD 313
           T YEAEHLLKRKP+V+ PNGLNV KFSA+HEFQNLHA++KEKINEFVRGHFYGHYDF+LD
Sbjct: 237 TAYEAEHLLKRKPDVVLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLD 296

Query: 314 KTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLR 373
           KTLYFFTAGRYEF+NKGAD+F+E+LARLN+ LK   SD TVVAF I P KTNNFNVESL+
Sbjct: 297 KTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLK 356

Query: 374 GHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRY 433
           G AV K LRDT+N ++ K   + KR++E  L G++P  +E   KEDK  +KR ++ALQR+
Sbjct: 357 GQAVRKQLRDTVNSVKEK---IGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRH 413

Query: 434 SLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLDYEEFVR 493
           SLPPV THN++DD NDP+L   RR  LFNS  DRVKV+FHPEFLSSTNPL GLDYEEFVR
Sbjct: 414 SLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR 473

Query: 494 GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNI 553
           GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI DP SYGIYIVDRR  
Sbjct: 474 GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFK 533

Query: 554 ALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLA 607
           + +ES++QL QYMY+F  L+RRQRIIQRNRTERLSDLLDWRNLG YY++AR+LA
Sbjct: 534 SPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLA 587

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. Length = 590

>gnl\|CDD\|203307 pfam05693, Glycogen_syn, Glycogen synthase	Back alignment and domain information

>gnl\|CDD\|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>gnl\|CDD\|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>gnl\|CDD\|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1	Back alignment and domain information

>gnl\|CDD\|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>gnl\|CDD\|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>gnl\|CDD\|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type	Back alignment and domain information

>gnl\|CDD\|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		755
KOG3742\|consensus		692		100.0
PF05693		633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	100.0
cd03793		590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	100.0
PLN02939		977	transferase, transferring glycosyl groups	100.0
PRK14098		489	glycogen synthase; Provisional	100.0
PRK14099		485	glycogen synthase; Provisional	100.0
PLN02316		1036	synthase/transferase	100.0
PRK00654		466	glgA glycogen synthase; Provisional	100.0
TIGR02095		473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
COG0297		487	GlgA Glycogen synthase [Carbohydrate transport and	100.0
cd03791		476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
TIGR02468		1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
PLN00142		815	sucrose synthase	100.0
TIGR02470		784	sucr_synth sucrose synthase. This model represents	100.0
TIGR02472		439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
TIGR03449		405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
TIGR02149		388	glgA_Coryne glycogen synthase, Corynebacterium fam	99.97
cd03796		398	GT1_PIG-A_like This family is most closely related	99.97
cd04962		371	GT1_like_5 This family is most closely related to	99.97
PRK15427		406	colanic acid biosynthesis glycosyltransferase WcaL	99.97
cd03800		398	GT1_Sucrose_synthase This family is most closely r	99.97
TIGR02094		601	more_P_ylases alpha-glucan phosphorylases. This fa	99.97
TIGR03088		374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	99.96
cd03819		355	GT1_WavL_like This family is most closely related	99.96
PLN02871		465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	99.96
PRK15179		694	Vi polysaccharide biosynthesis protein TviE; Provi	99.96
cd03805		392	GT1_ALG2_like This family is most closely related	99.96
cd03813		475	GT1_like_3 This family is most closely related to	99.96
PRK15484		380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	99.96
cd03818		396	GT1_ExpC_like This family is most closely related	99.95
PRK10125		405	putative glycosyl transferase; Provisional	99.95
cd04299		778	GT1_Glycogen_Phosphorylase_like This family is mos	99.95
PRK15490		578	Vi polysaccharide biosynthesis protein TviE; Provi	99.95
cd04955		363	GT1_like_6 This family is most closely related to	99.95
cd04951		360	GT1_WbdM_like This family is most closely related	99.95
cd05844		367	GT1_like_7 Glycosyltransferases catalyze the trans	99.95
cd03792		372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	99.95
TIGR02918		500	accessory Sec system glycosylation protein GtfA. M	99.95
PRK10307		412	putative glycosyl transferase; Provisional	99.95
cd03807		365	GT1_WbnK_like This family is most closely related	99.94
cd03821		375	GT1_Bme6_like This family is most closely related	99.94
cd03802		335	GT1_AviGT4_like This family is most closely relate	99.94
cd03809		365	GT1_mtfB_like This family is most closely related	99.94
PHA01630		331	putative group 1 glycosyl transferase	99.94
cd03822		366	GT1_ecORF704_like This family is most closely rela	99.93
cd03816		415	GT1_ALG1_like This family is most closely related	99.93
cd03801		374	GT1_YqgM_like This family is most closely related	99.93
cd04946		407	GT1_AmsK_like This family is most closely related	99.93
cd03825		365	GT1_wcfI_like This family is most closely related	99.93
PLN02949		463	transferase, transferring glycosyl groups	99.93
cd03812		358	GT1_CapH_like This family is most closely related	99.93
PF08323		245	Glyco_transf_5: Starch synthase catalytic domain;	99.93
cd03799		355	GT1_amsK_like This is a family of GT1 glycosyltran	99.93
cd03817		374	GT1_UGDG_like This family is most closely related	99.92
cd03806		419	GT1_ALG11_like This family is most closely related	99.92
cd03788		460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.92
PLN02846		462	digalactosyldiacylglycerol synthase	99.92
PHA01633		335	putative glycosyl transferase group 1	99.92
PRK09922		359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	99.92
cd03794		394	GT1_wbuB_like This family is most closely related	99.92
cd03795		357	GT1_like_4 This family is most closely related to	99.92
cd04949		372	GT1_gtfA_like This family is most closely related	99.91
cd03811		353	GT1_WabH_like This family is most closely related	99.91
cd03820		348	GT1_amsD_like This family is most closely related	99.91
TIGR03087		397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	99.91
cd03823		359	GT1_ExpE7_like This family is most closely related	99.91
cd03808		359	GT1_cap1E_like This family is most closely related	99.91
cd03814		364	GT1_like_2 This family is most closely related to	99.91
cd03798		377	GT1_wlbH_like This family is most closely related	99.91
cd03804		351	GT1_wbaZ_like This family is most closely related	99.91
TIGR02400		456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.9
PLN02275		371	transferase, transferring glycosyl groups	99.89
KOG1111\|consensus		426		99.89
PLN02501		794	digalactosyldiacylglycerol synthase	99.88
PLN03063		797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.84
PRK14501		726	putative bifunctional trehalose-6-phosphate syntha	99.82
PRK05749		425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.78
cd01635		229	Glycosyltransferase_GTB_type Glycosyltransferases	99.71
PLN02605		382	monogalactosyldiacylglycerol synthase	99.7
PRK13609		380	diacylglycerol glucosyltransferase; Provisional	99.69
PF00534		172	Glycos_transf_1: Glycosyl transferases group 1; In	99.69
cd03785		350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.67
PRK00726		357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.65
COG0438		381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.64
TIGR02398		487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.63
KOG0853\|consensus		495		99.63
TIGR01133		348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.62
TIGR00236		365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.62
PRK13608		391	diacylglycerol glucosyltransferase; Provisional	99.58
PLN03064		934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.55
cd04950		373	GT1_like_1 Glycosyltransferases catalyze the trans	99.54
PRK00025		380	lpxB lipid-A-disaccharide synthase; Reviewed	99.38
KOG3742\|consensus		692		99.38
cd03786		363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.36
PRK09814		333	beta-1,6-galactofuranosyltransferase; Provisional	99.18
PF13692		135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.03
PF13439		177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	98.96
PF13579		160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	98.95
TIGR00215		385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	98.93
KOG1387\|consensus		465		98.86
PF00982		474	Glyco_transf_20: Glycosyltransferase family 20; In	98.81
PRK10117		474	trehalose-6-phosphate synthase; Provisional	98.68
PLN02205		854	alpha,alpha-trehalose-phosphate synthase [UDP-form	98.59
PF13524		92	Glyco_trans_1_2: Glycosyl transferases group 1	98.53
COG0380		486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	98.5
TIGR03713		519	acc_sec_asp1 accessory Sec system protein Asp1. Th	98.44
PRK14986		815	glycogen phosphorylase; Provisional	97.9
KOG2941\|consensus		444		97.84
cd04300		797	GT1_Glycogen_Phosphorylase This is a family of oli	97.81
PRK14985		798	maltodextrin phosphorylase; Provisional	97.8
TIGR02093		794	P_ylase glycogen/starch/alpha-glucan phosphorylase	97.77
PF09314		185	DUF1972: Domain of unknown function (DUF1972); Int	97.43
COG0058		750	GlgP Glucan phosphorylase [Carbohydrate transport	96.91
TIGR02919		438	accessory Sec system glycosyltransferase GtfB. Mem	96.81
PF00862		550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	96.67
PF13477		139	Glyco_trans_4_2: Glycosyl transferase 4-like	96.47
PF00343		713	Phosphorylase: Carbohydrate phosphorylase; InterPr	96.45
PF13844		468	Glyco_transf_41: Glycosyl transferase family 41; P	95.29
TIGR03590		279	PseG pseudaminic acid biosynthesis-associated prot	94.66
PRK12446		352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	94.61
PF05693		633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	94.25
COG1519		419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	92.33
PF04007		335	DUF354: Protein of unknown function (DUF354); Inte	91.85
PF08288		90	PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP	91.63
TIGR01426		392	MGT glycosyltransferase, MGT family. This model de	90.26
KOG1050\|consensus		732		90.23
TIGR03492		396	conserved hypothetical protein. This protein famil	88.9
cd03784		401	GT1_Gtf_like This family includes the Gtfs, a grou	86.51
PF11997		268	DUF3492: Domain of unknown function (DUF3492); Int	80.69

>KOG3742\|consensus	Back alignment and domain information

Probab=100.00  E-value=1.8e-181  Score=1436.98  Aligned_cols=646  Identities=68%  Similarity=1.150  Sum_probs=616.9

Q ss_pred             cCCCCCCCeEEEEeehhhhcccchhhhhhhhHHHhHHHhCCcEEEEccCCCccccchhhhhhccCCCchHHHHHHHHhCC
Q psy4649           8 ASNSHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHG   87 (755)
Q Consensus         8 ~~~~~~~~~~fEvs~Ev~nKVGGI~dVi~slak~l~~~~G~~~~vigP~~~~~~~~~~e~~~~~~~~~l~~~~~~l~~~G   87 (755)
                      +.++++|.++|||||||+|||||||||++|||+++.+|+|++|++||||.++.++++++.++ ++..++..++.+|+++|
T Consensus        21 ~~~~~en~~lFEvAwEVaNkVGGIYtVl~sKA~vt~~e~gd~y~l~GP~~e~~~rteve~le-~~~~~i~~al~sm~s~G   99 (692)
T KOG3742|consen   21 DSADLENRLLFEVAWEVANKVGGIYTVLRSKAKVTTEEWGDNYCLIGPYKEHTYRTEVEPLE-PENRPIRRALDSMRSRG   99 (692)
T ss_pred             hhhhhhhhhhhhhHHHHhhccCcEEEEEeccCcccHHHhccceEEeccccccchhhcccccC-CCchHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999999999999999999999999999888 88889999999999999


Q ss_pred             eEEEEEEEeecCCCEEEEEcCCchhchhhhhhHhhhhccCCCCCCCCccchhhHHHHHHHHHHHHHHHHHhhhcCCCCce
Q psy4649          88 FKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKI  167 (755)
Q Consensus        88 ~~v~~grw~i~g~p~v~l~d~~~~~~~~~~iy~~~w~~~~i~~~~~~~e~~~~~~F~~av~~fl~~~~~~~~~~~~~~~d  167 (755)
                      ++++||||+|+|.|.|+|||.++..|.+|+|+++||+.|+|++|+.|.|.|++++||++++||++++.+....   ....
T Consensus       100 ~~~~~GrWLIeG~P~viLfdlgs~a~~l~~wK~elwe~c~IgiP~~D~EtNDaiilG~~vawFL~e~~~~~~~---~~~v  176 (692)
T KOG3742|consen  100 CKVHYGRWLIEGAPKVILFDLGSSAWKLNEWKGELWELCGIGIPHHDIETNDAIILGFMVAWFLGEFRELASS---YTAV  176 (692)
T ss_pred             cEEEeccEEecCCCeEEEEEcccchhhHhhHhHHHHHhcCCCCCcccccccchhhHHHHHHHHHHHHHhhccc---chHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999876443   3479


Q ss_pred             EEEeCcchhHHHHHHHHhcCCCCcEEEEeccCcchhhhhcCCcccccccccCCCchhhhhcchhHHHHHHHHHHhHcCEE
Q psy4649         168 ITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCAGNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLAHVF  247 (755)
Q Consensus       168 IiH~HeW~sg~~~~~lk~~~~~v~tVfTiH~t~~Gr~l~~~~~~fy~~L~~~~~~~~a~~~~iy~r~~~Ek~a~~~AD~I  247 (755)
                      |+|||||++|+|+++||.++++|.||||+|+|++|||||+++.|||++|+.++.|++||+++||||||+||+++++||+|
T Consensus       177 VahFHEW~AGVgL~l~R~rrl~iaTifTTHATLLGRyLCA~~~DfYNnLd~f~vD~EAGkr~IYHrYC~ERaa~h~AhVF  256 (692)
T KOG3742|consen  177 VAHFHEWQAGVGLILCRARRLDIATIFTTHATLLGRYLCAGNVDFYNNLDSFDVDKEAGKRQIYHRYCLERAAAHTAHVF  256 (692)
T ss_pred             HHHHHHHHhccchheehhcccceEEEeehhHHHHHHHHhcccchhhhchhhcccchhhccchhHHHHHHHHHhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCChHHHHHHHHHhCCCCCceeeCCCcCCCCCcchhhhhhHHHHHHHHHHhhhccccccccCCCCCceEEEEecccccC
Q psy4649         248 TTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLYFFTAGRYEFT  327 (755)
Q Consensus       248 iTVS~~ta~Ei~~~~g~~~d~VIpNGVD~~~f~~~~~~~~~~~~~r~~L~~fv~~~~~g~~~~~~~~~~~~~~~GRle~~  327 (755)
                      ||||++|+-|++++++++||.++|||+|+.+|.+.+++||+|+..|++|++|||||||||++|++|+++|||++|||||.
T Consensus       257 TTVSeITa~EAeHlLkRKPD~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~  336 (692)
T KOG3742|consen  257 TTVSEITALEAEHLLKRKPDVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFS  336 (692)
T ss_pred             hhHHHHHHHHHHHHHhcCCCeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhccccccccccceEEEEEeeeeeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHhHHHHhhcCCCCceEEEEEeeCCCCCcccccccccchhhhhhhHHHHHHHHhhhcchhhHhhhhcCC
Q psy4649         328 NKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCLMGR  407 (755)
Q Consensus       328 ~KG~d~lieAl~~L~~~l~~~~~~~~vv~fiI~~~g~~~~~~~~l~~~~~~~~l~~~~~~l~~~~~~~g~~~~e~~l~~~  407 (755)
                      |||.|+|||||+|||..+|.++++.|||+|+|+|+++++||+|+|||||+.|||+++++++++++   |+++|+.+|+++
T Consensus       337 NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~Vk~~~---Gkrifd~~l~g~  413 (692)
T KOG3742|consen  337 NKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEVKEKV---GKRIFDHCLRGE  413 (692)
T ss_pred             cCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHHHHHH---HHHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999   999999999999


Q ss_pred             CCCcccccchhhHHHHHHHHHhhhhcCCCCccccccccCCCchHHHHHHHhccCcCCCCceEEEEcccccCCCCCCCCCc
Q psy4649         408 MPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHPEFLSSTNPLFGLD  487 (755)
Q Consensus       408 ~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~th~~~~~~~d~il~~i~~~gl~n~~~drVkvif~p~~l~~~~~~~~~d  487 (755)
                      +||+++||+++|++.|||||+|++|+++|||+||||.||++||||+.||++||+|.++|||||||||+||++++|++++|
T Consensus       414 lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglD  493 (692)
T KOG3742|consen  414 LPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLD  493 (692)
T ss_pred             CCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccEEEeCCCCCCCChHHHHHHhhCCcEEEccCCCccccccccccCCCCceEEEecCCcccHHHHHHHHHHHHH
Q psy4649         488 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIADPTSYGIYIVDRRNIALEESIRQLAQYMY  567 (755)
Q Consensus       488 y~~~~~gadl~VfPS~yEpfG~t~lEAma~G~PvItT~~~G~~~~v~d~~~~~~~~Gi~V~~r~~~~~~e~~~~La~~l~  567 (755)
                      |++|+||||++|||||||||||||+||++||+|+||||+|||||+|+|+++++..+||||++|+..+++++++||++.|.
T Consensus       494 YeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~  573 (692)
T KOG3742|consen  494 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMY  573 (692)
T ss_pred             HHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999998999999999999888887777766665


Q ss_pred             HHhhccHHHHHHHHHHHHHHHcccChhhHHHHHHHHHHHHHhhhhcccccHHHHHHHHHhHHhhhcccchhhHHHHHHHH
Q psy4649         568 DFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQA  647 (755)
Q Consensus       568 ~~~~~~~~~r~~~r~~~~~~s~~fsW~~~a~~ye~ayqla~~~~~~~~~~~~~~~~~R~~a~~ls~~a~W~~~~~yY~~A  647 (755)
                      +||                                            ++||||||+||||+|+||+++||++++.||.+|
T Consensus       574 ~F~--------------------------------------------~qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~a  609 (692)
T KOG3742|consen  574 EFC--------------------------------------------KQSRRQRIIQRNRTERLSDLLDWKYLGRYYRKA  609 (692)
T ss_pred             HHH--------------------------------------------HHHHHHHHHHhcchhhHHHHHhHHHHhHHHHHH
Confidence            554                                            556777778888888888888899999999999


Q ss_pred             HHHHHHhcCCchHHhhhhhhhcCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy4649         648 RNKALKAVFPDLEARNKALKAVFPDLEVEDDDTDSGYGGRFSYPRPYSEPPSPSSSRATTPVPSQRNSDDED  719 (755)
Q Consensus       648 y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~s~~~~~~~~~~~~~~~~  719 (755)
                      +.+||++++||.|+.             ...  +...+++||++||.|+||||+.|+++||++|.++|+.+|
T Consensus       610 R~laL~r~~Pd~f~~-------------~~~--~~~~~~~~k~~rP~svppSp~~sr~~sp~~s~~~~~~~~  666 (692)
T KOG3742|consen  610 RHLALSRAYPDQFDE-------------LVG--ENEKGKGFKYPRPLSVPPSPSTSRHSSPVPSTHGDDGED  666 (692)
T ss_pred             HHHHHHhhCcHHHHH-------------hhc--CCccccccccCCCCCCCCCccccccCCCCCCCCcccccc
Confidence            999999999999985             111  234578999999999999999999999999988888766

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3	Back alignment and domain information

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis	Back alignment and domain information

>PLN02939 transferase, transferring glycosyl groups	Back alignment and domain information

>PRK14098 glycogen synthase; Provisional	Back alignment and domain information

>PRK14099 glycogen synthase; Provisional	Back alignment and domain information

>PLN02316 synthase/transferase	Back alignment and domain information

>PRK00654 glgA glycogen synthase; Provisional	Back alignment and domain information

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type	Back alignment and domain information

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant	Back alignment and domain information

>PLN00142 sucrose synthase	Back alignment and domain information

>TIGR02470 sucr_synth sucrose synthase	Back alignment and domain information

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain	Back alignment and domain information

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase	Back alignment and domain information

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family	Back alignment and domain information

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional	Back alignment and domain information

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02094 more_P_ylases alpha-glucan phosphorylases	Back alignment and domain information

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	Back alignment and domain information

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional	Back alignment and domain information

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PRK10125 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences	Back alignment and domain information

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional	Back alignment and domain information

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli	Back alignment and domain information

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose	Back alignment and domain information

>TIGR02918 accessory Sec system glycosylation protein GtfA	Back alignment and domain information

>PRK10307 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PHA01630 putative group 1 glycosyl transferase	Back alignment and domain information

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known	Back alignment and domain information

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PLN02949 transferase, transferring glycosyl groups	Back alignment and domain information

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2	Back alignment and domain information

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria	Back alignment and domain information

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor	Back alignment and domain information

>PLN02846 digalactosyldiacylglycerol synthase	Back alignment and domain information

>PHA01633 putative glycosyl transferase group 1	Back alignment and domain information

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional	Back alignment and domain information

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding	Back alignment and domain information

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated	Back alignment and domain information

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases	Back alignment and domain information

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>PLN02275 transferase, transferring glycosyl groups	Back alignment and domain information

>KOG1111\|consensus	Back alignment and domain information

>PLN02501 digalactosyldiacylglycerol synthase	Back alignment and domain information

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional	Back alignment and domain information

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed	Back alignment and domain information

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PLN02605 monogalactosyldiacylglycerol synthase	Back alignment and domain information

>PRK13609 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis	Back alignment and domain information

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional	Back alignment and domain information

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase	Back alignment and domain information

>KOG0853\|consensus	Back alignment and domain information

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	Back alignment and domain information

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase	Back alignment and domain information

>PRK13608 diacylglycerol glucosyltransferase; Provisional	Back alignment and domain information

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional	Back alignment and domain information

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds	Back alignment and domain information

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed	Back alignment and domain information

>KOG3742\|consensus	Back alignment and domain information

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)	Back alignment and domain information

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional	Back alignment and domain information

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A	Back alignment and domain information

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A	Back alignment and domain information

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A	Back alignment and domain information

>TIGR00215 lpxB lipid-A-disaccharide synthase	Back alignment and domain information

>KOG1387\|consensus	Back alignment and domain information

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK10117 trehalose-6-phosphate synthase; Provisional	Back alignment and domain information

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]	Back alignment and domain information

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1	Back alignment and domain information

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1	Back alignment and domain information

>PRK14986 glycogen phosphorylase; Provisional	Back alignment and domain information

>KOG2941\|consensus	Back alignment and domain information

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases	Back alignment and domain information

>PRK14985 maltodextrin phosphorylase; Provisional	Back alignment and domain information

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases	Back alignment and domain information

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases	Back alignment and domain information

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR02919 accessory Sec system glycosyltransferase GtfB	Back alignment and domain information

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2	Back alignment and domain information

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like	Back alignment and domain information

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A	Back alignment and domain information

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG	Back alignment and domain information

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed	Back alignment and domain information

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3	Back alignment and domain information

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length	Back alignment and domain information

>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins	Back alignment and domain information

>TIGR01426 MGT glycosyltransferase, MGT family	Back alignment and domain information

>KOG1050\|consensus	Back alignment and domain information

>TIGR03492 conserved hypothetical protein	Back alignment and domain information

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin	Back alignment and domain information

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		755
3naz_A		725	Basal State Form Of Yeast Glycogen Synthase Length		0.0
3nb0_A		725	Glucose-6-Phosphate Activated Form Of Yeast Glycoge		0.0

>pdb|3NAZ|A Chain A, Basal State Form Of Yeast Glycogen Synthase Length = 725

Back alignment and structure

Iteration: 1

Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/619 (53%), Positives = 428/619 (69%), Gaps = 27/619 (4%) Query: 9 SNSHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEV 68 S QN +FE+A EVAN+VGGIY+V++SKA ++ + + Y L+GP + + + EV+ + Sbjct: 22 SRDLQNHLLFETATEVANRVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDIL 81 Query: 69 EFMNGS-------PLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQE 121 ++ P+Q A+ M G G WL++G P++ILFD+ S +E+K + Sbjct: 82 DWKKPEAFSDEMRPVQHALQTMESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGD 141 Query: 122 LWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLI 181 LWS + P D E NDAI+LG+ VA F+ E VAH + I+ HFHEW AG+ L Sbjct: 142 LWSLVGIPSPENDFETNDAILLGYTVAWFLGE---VAHLD-SQHAIVAHFHEWLAGVALP 197 Query: 182 ALRTRKVPVATVFTTHATLLGRYLCA-GNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAA 240 R R++ V T+FTTHATLLGRYLCA G+ DFYN L + DVD EAGR IYHRYC+ERAA Sbjct: 198 LCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAA 257 Query: 241 SHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFV 300 +H A VFTTVS+IT +EAEHLLKRKP+ I PNGLNV+KF A HEFQNLHA KEKIN+FV Sbjct: 258 AHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFV 317 Query: 301 RGHFYGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIF 360 RGHF+G +DF+LD TLYFF AGRYE+ NKGAD+FIE+LARLN+ LK + S TVVAF++ Sbjct: 318 RGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVM 377 Query: 361 PTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYE-------TCLMGRMPTE-D 412 P K N+F VE+L+G A ++L +T++E+ +++ KRI++ L +PT+ Sbjct: 378 PAKNNSFTVEALKGQAEVRALENTVHEV---TTSIGKRIFDHAIRYPHNGLTTELPTDLG 434 Query: 413 EFFTKEDKTRIKRCLYALQR--YSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKV 470 E DK +KR + AL+R LPP+ THN++DD ND +L R+ LFNS DRVK+ Sbjct: 435 ELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKM 494 Query: 471 IFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFG 530 IFHPEFL++ NP+ GLDY+EFVRGCHLGVFPSYYEPWGYTPAECTVMG+PSITTN+SGFG Sbjct: 495 IFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFG 554 Query: 531 CFMEEHIA--DPTSYGIYIVDRRNIALEESIRQLAQYMYDFTTLXXXXXXXXXXXTERLS 588 +ME+ I YGIYIVDRR A +ES+ QL YM +F TERLS Sbjct: 555 SYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTAAQAINQRNRTERLS 614 Query: 589 DLLDWRNLGVYYKQARKLA 607 DLLDW+ +G+ Y +AR+LA Sbjct: 615 DLLDWKRMGLEYVKARQLA 633

PyMOL of 3naz

>pdb|3NB0|A Chain A, Glucose-6-Phosphate Activated Form Of Yeast Glycogen Synthase Length = 725

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		755
3nb0_A		725	Glycogen [starch] synthase isoform 2; glycogen syn	0.0
3oy2_A		413	Glycosyltransferase B736L; rossmann fold, GDP-mann	3e-08
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	7e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
2gek_A		406	Phosphatidylinositol mannosyltransferase (PIMA); G	1e-06
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	3e-05
2x6q_A		416	Trehalose-synthase TRET; biosynthetic protein; 2.2	4e-05
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	7e-05

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725	Back alignment and structure

 Score =  738 bits (1905), Expect = 0.0
 Identities = 343/717 (47%), Positives = 448/717 (62%), Gaps = 77/717 (10%)

Query: 13  QNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMN 72
           QN  +FE+A EVAN+VGGIY+V++SKA ++  +  + Y L+GP  + + + EV+ +++  
Sbjct: 26  QNHLLFETATEVANRVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKK 85

Query: 73  G-------SPLQIAVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWST 125
                    P+Q A+  M   G     G WL++G P++ILFD+ S     +E+K +LWS 
Sbjct: 86  PEAFSDEMRPVQHALQTMESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSL 145

Query: 126 CSLGVPHLDIEANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEWQAGIGLIALRT 185
             +  P  D E NDAI+LG+ VA F+ E      +      I+ HFHEW AG+ L   R 
Sbjct: 146 VGIPSPENDFETNDAILLGYTVAWFLGEV----AHLDSQHAIVAHFHEWLAGVALPLCRK 201

Query: 186 RKVPVATVFTTHATLLGRYLCA-GNTDFYNNLSTFDVDFEAGRRQIYHRYCMERAASHLA 244
           R++ V T+FTTHATLLGRYLCA G+ DFYN L + DVD EAGR  IYHRYC+ERAA+H A
Sbjct: 202 RRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSA 261

Query: 245 HVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHF 304
            VFTTVS+IT +EAEHLLKRKP+ I PNGLNV+KF A HEFQNLHA  KEKIN+FVRGHF
Sbjct: 262 DVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHF 321

Query: 305 YGHYDFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKT 364
           +G +DF+LD TLYFF AGRYE+ NKGAD+FIE+LARLN+ LK + S  TVVAF++ P K 
Sbjct: 322 HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKN 381

Query: 365 NNFNVESLRGHAVTKSLRDTINEIQGKMSNMSKRIYETCL-------MGRMPTE-DEFFT 416
           N+F VE+L+G A  ++L +T++E+   +     RI++  +          +PT+  E   
Sbjct: 382 NSFTVEALKGQAEVRALENTVHEVTTSIGK---RIFDHAIRYPHNGLTTELPTDLGELLK 438

Query: 417 KEDKTRIKRCLYALQRY--SLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRVKVIFHP 474
             DK  +KR + AL+R    LPP+ THN++DD ND +L   R+  LFNS  DRVK+IFHP
Sbjct: 439 SSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHP 498

Query: 475 EFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 534
           EFL++ NP+ GLDY+EFVRGCHLGVFPSYYEPWGYTPAECTVMG+PSITTN+SGFG +ME
Sbjct: 499 EFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYME 558

Query: 535 EHIADPT--SYGIYIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLD 592
           + I       YGIYIVDRR  A +ES+ QL  YM +F    RRQRI QRN TE LSDLLD
Sbjct: 559 DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLD 618

Query: 593 WRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARNKAL 652
           W+ +G+ Y +AR+L                                            AL
Sbjct: 619 WKRMGLEYVKARQL--------------------------------------------AL 634

Query: 653 KAVFPDLEARNKALKAVFPDLEVEDDDTDSGYGGRFSYPRPYSEPPSPSSSRATTPV 709
           +  +PD             +   + +      G +    RP S P SP   R+ + V
Sbjct: 635 RRGYPDQFRELVG------EELNDSNMDALAGGKKLKVARPLSVPGSPRDLRSNSTV 685

PyMOL of 3nb0

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413	Back alignment and structure

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394	Back alignment and structure

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416	Back alignment and structure

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		755
3nb0_A		725	Glycogen [starch] synthase isoform 2; glycogen syn	100.0
3vue_A		536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
3fro_A		439	GLGA glycogen synthase; glycosyltransferase family	100.0
1rzu_A		485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
2qzs_A		485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
3s28_A		816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
3c48_A		438	Predicted glycosyltransferases; retaining glycosyl	100.0
2r60_A		499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
2jjm_A		394	Glycosyl transferase, group 1 family protein; anth	99.98
2iw1_A		374	Lipopolysaccharide core biosynthesis protein RFAG;	99.96
3oy2_A		413	Glycosyltransferase B736L; rossmann fold, GDP-mann	99.96
3okp_A		394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	99.96
2x6q_A		416	Trehalose-synthase TRET; biosynthetic protein; 2.2	99.95
1uqt_A		482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.95
2gek_A		406	Phosphatidylinositol mannosyltransferase (PIMA); G	99.95
2iuy_A		342	Avigt4, glycosyltransferase; antibiotics, family G	99.94
2x0d_A		413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	99.92
2c4m_A		796	Glycogen phosphorylase; allosteric control, phosph	99.88
1l5w_A		796	Maltodextrin phosphorylase; enzymatic catalysis, s	99.88
3t5t_A		496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.86
2hy7_A		406	Glucuronosyltransferase GUMK; glycosyltransferases	99.86
1f0k_A		364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.86
3beo_A		375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.85
1vgv_A		384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.84
2gj4_A		824	Glycogen phosphorylase, muscle form; transferase;	99.84
2bfw_A		200	GLGA glycogen synthase; glycosyltransferase family	99.83
3qhp_A		166	Type 1 capsular polysaccharide biosynthesis prote	99.82
2vsy_A		568	XCC0866; transferase, glycosyl transferase, GT-B,	99.8
2f9f_A		177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.73
2xci_A		374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.73
1v4v_A		376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.68
3dzc_A		396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.48
3ot5_A		403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.33
3otg_A		412	CALG1; calicheamicin, TDP, structural genomics, PS	99.23
3rhz_A		339	GTF3, nucleotide sugar synthetase-like protein; gl	99.22
4hwg_A		385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	98.82
3s2u_A		365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	98.79
4fzr_A		398	SSFS6; structural genomics, PSI-biology, protein s	98.79
3tsa_A		391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	98.62
3q3e_A		631	HMW1C-like glycosyltransferase; N-glycosylation; 2	98.57
2iyf_A		430	OLED, oleandomycin glycosyltransferase; antibiotic	98.56
3ia7_A		402	CALG4; glycosysltransferase, calicheamicin, enediy	98.23
3oti_A		398	CALG3; calicheamicin, TDP, structural genomics, PS	98.07
3rsc_A		415	CALG2; TDP, enediyne, structural genomics, PSI-2,	97.95
2o6l_A		170	UDP-glucuronosyltransferase 2B7; drug metabolism,	97.93
2p6p_A		384	Glycosyl transferase; X-RAY-diffraction,urdamycina	97.86
2yjn_A		441	ERYCIII, glycosyltransferase; transferase, cytochr	97.78
1ygp_A		879	Yeast glycogen phosphorylase; phosphorylated form,	97.77
3h4t_A		404	Glycosyltransferase GTFA, glycosyltransferase; van	96.71
1iir_A		415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	96.23
4amg_A		400	Snogd; transferase, polyketide biosynthesis, GT1 f	95.89
1rrv_A		416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	95.39
2iya_A		424	OLEI, oleandomycin glycosyltransferase; carbohydra	95.14
4gyw_A		723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	94.11
3nb0_A		725	Glycogen [starch] synthase isoform 2; glycogen syn	90.77

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*	Back alignment and structure

Probab=100.00  E-value=3.7e-141  Score=1219.92  Aligned_cols=641  Identities=54%  Similarity=0.911  Sum_probs=566.2

Q ss_pred             ccCCCCCCCeEEEEeehhhhcccchhhhhhhhHHHhHHHhCCcEEEEccCCCccccchhhhhhccCCCc--------hHH
Q psy4649           7 QASNSHQNRWVFESAWEVANKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSP--------LQI   78 (755)
Q Consensus         7 ~~~~~~~~~~~fEvs~Ev~nKVGGI~dVi~slak~l~~~~G~~~~vigP~~~~~~~~~~e~~~~~~~~~--------l~~   78 (755)
                      .|.++++|+||||+||||||||||||||++|||+++++++|++|++|||+++..++++|++++ ++++.        ++.
T Consensus        20 ~m~~~~~~~~lfE~swEV~NkVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~-~~~~~~~~~~~~~~~~   98 (725)
T 3nb0_A           20 HMSRDLQNHLLFETATEVANRVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILD-WKKPEAFSDEMRPVQH   98 (725)
T ss_dssp             --CCEEEEEEEEEEETTTTSCSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECC-SSSGGGSCSTTHHHHH
T ss_pred             ccccccCCCeEEeeehhhhcccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecC-CCCchhhcchhHHHHH
Confidence            456888999999999999999999999999999999999999999999998877777777655 56555        688


Q ss_pred             HHHHHHhCCeEEEEEEEeecCCCEEEEEcCCchhchhhhhhHhhhhccCCCCCCCCccchhhHHHHHHHHHHHHHHHHHh
Q psy4649          79 AVDKMREHGFKLHVGNWLVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDIEANDAIILGHMVATFIAEFEKVA  158 (755)
Q Consensus        79 ~~~~l~~~G~~v~~grw~i~g~p~v~l~d~~~~~~~~~~iy~~~w~~~~i~~~~~~~e~~~~~~F~~av~~fl~~~~~~~  158 (755)
                      ++++|+.+|++|++|||+|+|.|+|+|||++++++.+|+||+++|+.+||+++++|.+++++.+|+|++++|++.+.. +
T Consensus        99 ~~~~~~~~G~~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~-~  177 (725)
T 3nb0_A           99 ALQTMESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAH-L  177 (725)
T ss_dssp             HHHHHHTTTCCEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHCCCeEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHHh-c
Confidence            888899999999999999999999999999999999999999999999999999999999999999999999998754 2


Q ss_pred             hhcCCCCceEEEeCcchhHHHHHHHHhcCCCCcEEEEeccCcchhhhhc-CCcccccccccCCCchhhhhcchhHHHHHH
Q psy4649         159 HNEFGPPKIITHFHEWQAGIGLIALRTRKVPVATVFTTHATLLGRYLCA-GNTDFYNNLSTFDVDFEAGRRQIYHRYCME  237 (755)
Q Consensus       159 ~~~~~~~~dIiH~HeW~sg~~~~~lk~~~~~v~tVfTiH~t~~Gr~l~~-~~~~fy~~L~~~~~~~~a~~~~iy~r~~~E  237 (755)
                      ..   ..|||+||||||+|+++++||.+.++++||||||||.+||++|+ ++.++|+++..++.+.+++.+++++.+++|
T Consensus       178 ~~---~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~E  254 (725)
T 3nb0_A          178 DS---QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIE  254 (725)
T ss_dssp             CC---SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHH
T ss_pred             CC---CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHH
Confidence            21   36999999999999999999987789999999999999999998 778889888888888888888999999999


Q ss_pred             HHHHhHcCEEEeCChHHHHHHHHHhCCCCCceeeCCCcCCCCCcchhhhhhHHHHHHHHHHhhhccccccccCCCCCceE
Q psy4649         238 RAASHLAHVFTTVSEITGYEAEHLLKRKPEVITPNGLNVVKFSAIHEFQNLHARAKEKINEFVRGHFYGHYDFNLDKTLY  317 (755)
Q Consensus       238 k~a~~~AD~IiTVS~~ta~Ei~~~~g~~~d~VIpNGVD~~~f~~~~~~~~~~~~~r~~L~~fv~~~~~g~~~~~~~~~~~  317 (755)
                      |++++.||+|||||++|++|++++++++++.+||||||++.|.+.+++++.|+.+|++|++|++++|+++++++++++++
T Consensus       255 Kaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~li  334 (725)
T 3nb0_A          255 RAAAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLY  334 (725)
T ss_dssp             HHHHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEE
T ss_pred             HHHHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeE
Confidence            99999999999999999999999999999988999999999988888899999999999999999999988887788999


Q ss_pred             EEEecccccCCCCHHHHHHHHHHhHHHHhhcCCCCceEEEEEeeCCCCCcccccccccchhhhhhhHHHHHHHHhhhcch
Q psy4649         318 FFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEIQGKMSNMSK  397 (755)
Q Consensus       318 ~~~~GRle~~~KG~d~lieAl~~L~~~l~~~~~~~~vv~fiI~~~g~~~~~~~~l~~~~~~~~l~~~~~~l~~~~~~~g~  397 (755)
                      ||++|||+++|||+|+||+|+++|++.++..+++.+||+|||+|+|++++|+|+|||||++|||++|+++++++|   |+
T Consensus       335 ifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~---~~  411 (725)
T 3nb0_A          335 FFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSI---GK  411 (725)
T ss_dssp             EEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH---HH
T ss_pred             EEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHH---hH
Confidence            999999999999999999999999999988888999999999999999999999999999999999999999999   99


Q ss_pred             hhHhhhh-------cCCCC-CcccccchhhHHHHHHHHHhhhhc--CCCCccccccccCCCchHHHHHHHhccCcCCCCc
Q psy4649         398 RIYETCL-------MGRMP-TEDEFFTKEDKTRIKRCLYALQRY--SLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDR  467 (755)
Q Consensus       398 ~~~e~~l-------~~~~p-~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~th~~~~~~~d~il~~i~~~gl~n~~~dr  467 (755)
                      ++|+.++       ++++| |++++|..+|+++|||||||++|+  .+||++||||+|+.+|+|+++++++||+|.++||
T Consensus       412 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~dr  491 (725)
T 3nb0_A          412 RIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDR  491 (725)
T ss_dssp             HHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCS
T ss_pred             HHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCc
Confidence            9999999       68899 999999999999999999999998  9999999999999999999999999999999999


Q ss_pred             eEEEEcccccCCCCCCCCCcHHHHHhhccEEEeCCCCCCCChHHHHHHhhCCcEEEccCCCcccccccccc--CCCCceE
Q psy4649         468 VKVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIA--DPTSYGI  545 (755)
Q Consensus       468 Vkvif~p~~l~~~~~~~~~dy~~~~~gadl~VfPS~yEpfG~t~lEAma~G~PvItT~~~G~~~~v~d~~~--~~~~~Gi  545 (755)
                      |||||+|+||+++||+|++||.++|++||+|||||+|||||+|+|||||||+|||+|+++|++++|.+.+.  +++.+|+
T Consensus       492 VKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~  571 (725)
T 3nb0_A          492 VKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGI  571 (725)
T ss_dssp             EEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTE
T ss_pred             eeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999988642  1125899


Q ss_pred             EEecCCcccHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHcccChhhHHHHHHHHHHHHHhhhhcccccHHHHHHHH
Q psy4649         546 YIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARKLAQYMYDFTTLNRRQRIIQR  625 (755)
Q Consensus       546 ~V~~r~~~~~~e~~~~La~~l~~~~~~~~~~r~~~r~~~~~~s~~fsW~~~a~~ye~ayqla~~~~~~~~~~~~~~~~~R  625 (755)
                      +|+++++.++++.+++|+++|..|++.++++|+.+++++++++++|+                                 
T Consensus       572 lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FS---------------------------------  618 (725)
T 3nb0_A          572 YIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLD---------------------------------  618 (725)
T ss_dssp             EEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGB---------------------------------
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC---------------------------------
Confidence            99999889999999999999999987778888888888877777777                                 


Q ss_pred             HhHHhhhcccchhhHHHHHHHHHHHHHHhcCCchHHhhhhhhhcCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy4649         626 NRTERLSDLLDWRNLGVYYKQARNKALKAVFPDLEARNKALKAVFPDLEVEDDDTDSGYGGRFSYPRPYSEPPSPSSSRA  705 (755)
Q Consensus       626 ~~a~~ls~~a~W~~~~~yY~~Ay~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~s~~  705 (755)
                                 |++++++|.++|+.||++++|+.|....     ....-|.... +...+.+||+|||+|+|+||+.|++
T Consensus       619 -----------We~iA~~Yl~~Ye~aL~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  681 (725)
T 3nb0_A          619 -----------WKRMGLEYVKARQLALRRGYPDQFRELV-----GEELNDSNMD-ALAGGKKLKVARPLSVPGSPRDLRS  681 (725)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHCHHHHHHTT-----SSCCCCSSHH-HHC----------------------
T ss_pred             -----------HHHHHHHHHHHHHHHHhhccchhhhhcc-----cccccccccc-ccccccceeccCCCCCCcCCccccc
Confidence                       8889999999999999999999997510     0000000001 2345679999999999999998864

PyMOL of 3nb0

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*	Back alignment and structure

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*	Back alignment and structure

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A	Back alignment and structure

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A	Back alignment and structure

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*	Back alignment and structure

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*	Back alignment and structure

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*	Back alignment and structure

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*	Back alignment and structure

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*	Back alignment and structure

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*	Back alignment and structure

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*	Back alignment and structure

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*	Back alignment and structure

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*	Back alignment and structure

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*	Back alignment and structure

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*	Back alignment and structure

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*	Back alignment and structure

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}	Back alignment and structure

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*	Back alignment and structure

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*	Back alignment and structure

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*	Back alignment and structure

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*	Back alignment and structure

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A	Back alignment and structure

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*	Back alignment and structure

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...	Back alignment and structure

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8	Back alignment and structure

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}	Back alignment and structure

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*	Back alignment and structure

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8	Back alignment and structure

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*	Back alignment and structure

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3	Back alignment and structure

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}	Back alignment and structure

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}	Back alignment and structure

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*	Back alignment and structure

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*	Back alignment and structure

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}	Back alignment and structure

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}	Back alignment and structure

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*	Back alignment and structure

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*	Back alignment and structure

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A	Back alignment and structure

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}	Back alignment and structure

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*	Back alignment and structure

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*	Back alignment and structure

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}	Back alignment and structure

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}	Back alignment and structure

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}	Back alignment and structure

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*	Back alignment and structure

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*	Back alignment and structure

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5	Back alignment and structure

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}	Back alignment and structure

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*	Back alignment and structure

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		755
d1rzua_		477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bisa1		437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2iw1a1		370	Lipopolysaccharide core biosynthesis protein RfaG	99.95
d1uqta_		456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.88
d2bfwa1		196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.86
d2f9fa1		166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.72
d1l5wa_		796	Maltodextrin phosphorylase (MALP) {Escherichia col	98.22
d2gj4a1		824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	97.93
d1ygpa_		876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	96.94
d1pn3a_		391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	94.73
d1iira_		401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	94.28
d1rrva_		401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	93.9
d1f0ka_		351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.5

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=8e-45  Score=404.53  Aligned_cols=433  Identities=15%  Similarity=0.172  Sum_probs=266.3

Q ss_pred             Eeehhh--hcccchhhhhhhhHHHhHHHhCCcEEEEccCCCccccchhhhhhccCCCchHHHHHHHHhCC--eEEEEEEE
Q psy4649          20 SAWEVA--NKVGGIYTVIRSKAFVSSEELGNQYVLLGPYKEQSARTEVEEVEFMNGSPLQIAVDKMREHG--FKLHVGNW   95 (755)
Q Consensus        20 vs~Ev~--nKVGGI~dVi~slak~l~~~~G~~~~vigP~~~~~~~~~~e~~~~~~~~~l~~~~~~l~~~G--~~v~~grw   95 (755)
                      |+||..  .|||||+||+.+|+++|++ .||+|.||.|.|+.+.....+...  . ...      ....|  ..+.... 
T Consensus         6 v~~e~~P~~~~GGl~~vv~~La~~L~~-~Gh~V~Vi~P~y~~~~~~~~~~~~--~-~~~------~~~~~~~~~~~~~~-   74 (477)
T d1rzua_           6 VSSEIYPLIKTGGLADVVGALPIALEA-HGVRTRTLIPGYPAVKAAVTDPVK--C-FEF------TDLLGEKADLLEVQ-   74 (477)
T ss_dssp             ECSCBTTTBCSSHHHHHHHHHHHHHHT-TTCEEEEEEECCHHHHHHCCSCEE--E-EEE------SCSSSCCEEEEEEE-
T ss_pred             EEEeeecccccCcHHHHHHHHHHHHHH-cCCeEEEEecCCcchhhhcccceE--E-EEE------eccCCceEEEEEEE-
Confidence            677766  5999999999999999976 999999999999865221000000  0 000      01123  3333333 


Q ss_pred             eecCCCEEEEEcCCchhchhhhhhHhhhhccCCCCCCCCc-cchhhHHHHHHHHHHHHHHHHHhhhcCCCCceEEEeCcc
Q psy4649          96 LVDGNPQIILFDIGSAAWKMDEYKQELWSTCSLGVPHLDI-EANDAIILGHMVATFIAEFEKVAHNEFGPPKIITHFHEW  174 (755)
Q Consensus        96 ~i~g~p~v~l~d~~~~~~~~~~iy~~~w~~~~i~~~~~~~-e~~~~~~F~~av~~fl~~~~~~~~~~~~~~~dIiH~HeW  174 (755)
                       .+| ..+++++.+.++...+.+|...+       ...+. ....+..|+.++++++....   .   ..+|||||+|+|
T Consensus        75 -~~~-v~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~pDIvH~h~~  139 (477)
T d1rzua_          75 -HER-LDLLILDAPAYYERSGGPYLGQT-------GKDYPDNWKRFAALSLAAARIGAGVL---P---GWRPDMVHAHDW  139 (477)
T ss_dssp             -ETT-EEEEEEECHHHHCSSSCSSBCTT-------SSBCTTHHHHHHHHHHHHHHHHTTCS---S---SCCCSEEEEEHH
T ss_pred             -ECC-eeEEEecChhhcccCCCcccCcc-------cccccccHHHHHHHHHHHHhhhhhcc---c---CCCCCEEEecch
Confidence             234 67888888776622233322111       01111 11233445544443332211   1   248999999999


Q ss_pred             hhHHHHHHHHh-cCCCCcEEEEeccCcchhhhhcCCccccccc----ccCCCchhhhhcchhHHHHHHHHHHhHcCEEEe
Q psy4649         175 QAGIGLIALRT-RKVPVATVFTTHATLLGRYLCAGNTDFYNNL----STFDVDFEAGRRQIYHRYCMERAASHLAHVFTT  249 (755)
Q Consensus       175 ~sg~~~~~lk~-~~~~v~tVfTiH~t~~Gr~l~~~~~~fy~~L----~~~~~~~~a~~~~iy~r~~~Ek~a~~~AD~IiT  249 (755)
                      ++++++.+++. +...+|+|+|+|++.+......   .+...+    ..+...    ....+...+.++.++..||.+++
T Consensus       140 ~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ad~~~~  212 (477)
T d1rzua_         140 QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGA---NIFSKLALPAHAFGME----GIEYYNDVSFLKGGLQTATALST  212 (477)
T ss_dssp             HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECG---GGGGGSCCCGGGSSTT----TTEETTEEEHHHHHHHHCSEEEE
T ss_pred             hHHHHHHHHHHhhCCCCCEEEEEecccccccCCH---HHHHHhhcchhhcccc----cccccchhHHHHHHHHhhhhhhh
Confidence            99988888774 3467999999999855322100   000000    001100    01112345678899999999999


Q ss_pred             CChHHHHHHHH-HhCCC--------CC--ceeeCCCcCCCCCcchh----------hhhhHHHHHHHHHHhhhccccccc
Q psy4649         250 VSEITGYEAEH-LLKRK--------PE--VITPNGLNVVKFSAIHE----------FQNLHARAKEKINEFVRGHFYGHY  308 (755)
Q Consensus       250 VS~~ta~Ei~~-~~g~~--------~d--~VIpNGVD~~~f~~~~~----------~~~~~~~~r~~L~~fv~~~~~g~~  308 (755)
                      ||..+++++.. .++..        ..  .+|+||+|.+.|.+...          ........++.+..    +    +
T Consensus       213 vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~----~----~  284 (477)
T d1rzua_         213 VSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE----H----F  284 (477)
T ss_dssp             SCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH----H----H
T ss_pred             ccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHH----h----c
Confidence            99999988743 12211        11  58999999877633110          01112223333321    1    2


Q ss_pred             cCCCCCceEEEEecccccCCCCHHHHHHHHHHhHHHHhhcCCCCceEEEEEeeCCCCCcccccccccchhhhhhhHHHHH
Q psy4649         309 DFNLDKTLYFFTAGRYEFTNKGADVFIESLARLNHYLKAANSDVTVVAFLIFPTKTNNFNVESLRGHAVTKSLRDTINEI  388 (755)
Q Consensus       309 ~~~~~~~~~~~~~GRle~~~KG~d~lieAl~~L~~~l~~~~~~~~vv~fiI~~~g~~~~~~~~l~~~~~~~~l~~~~~~l  388 (755)
                      +++.++.++|+++||+. ++||+|+||+|+.++.+.      +   +.|+++|.|...                     .
T Consensus       285 ~~~~~~~~~i~~vgrl~-~~KG~~~Ll~a~~~~~~~------~---~~l~~~G~G~~~---------------------~  333 (477)
T d1rzua_         285 RIDDDGSPLFCVISRLT-WQKGIDLMAEAVDEIVSL------G---GRLVVLGAGDVA---------------------L  333 (477)
T ss_dssp             TCCCSSSCEEEEESCBS-TTTTHHHHHTTHHHHHHT------T---CEEEEEECBCHH---------------------H
T ss_pred             ccccCCccEEEEEeeee-ecCCcHHHHHHHHHHHhh------C---CeEEEEecCCch---------------------H
Confidence            45445667888999998 799999999999998653      2   346777776421                     0


Q ss_pred             HHHhhhcchhhHhhhhcCCCCCcccccchhhHHHHHHHHHhhhhcCCCCccccccccCCCchHHHHHHHhccCcCCCCce
Q psy4649         389 QGKMSNMSKRIYETCLMGRMPTEDEFFTKEDKTRIKRCLYALQRYSLPPVTTHNVIDDWNDPVLCAFRRCHLFNSVHDRV  468 (755)
Q Consensus       389 ~~~~~~~g~~~~e~~l~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~th~~~~~~~d~il~~i~~~gl~n~~~drV  468 (755)
                      ..++                                                           +.  ...++    .++|
T Consensus       334 ~~~~-----------------------------------------------------------~~--~~~~~----~~~v  348 (477)
T d1rzua_         334 EGAL-----------------------------------------------------------LA--AASRH----HGRV  348 (477)
T ss_dssp             HHHH-----------------------------------------------------------HH--HHHHT----TTTE
T ss_pred             HHHH-----------------------------------------------------------HH--HHhhc----CCeE
Confidence            0000                                                           00  00111    2344


Q ss_pred             EEEEcccccCCCCCCCCCcHHHHHhhccEEEeCCCCCCCChHHHHHHhhCCcEEEccCCCcccccccccc----CCCCce
Q psy4649         469 KVIFHPEFLSSTNPLFGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIA----DPTSYG  544 (755)
Q Consensus       469 kvif~p~~l~~~~~~~~~dy~~~~~gadl~VfPS~yEpfG~t~lEAma~G~PvItT~~~G~~~~v~d~~~----~~~~~G  544 (755)
                      .+  ++.+-       .-.+..+|++||++|+||.+||||++++||||||+|||+|++||+.+.|.|...    ..+.+|
T Consensus       349 ~~--~~~~~-------~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G  419 (477)
T d1rzua_         349 GV--AIGYN-------EPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATG  419 (477)
T ss_dssp             EE--EESCC-------HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCB
T ss_pred             EE--EcccC-------hhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCce
Confidence            33  23221       113456899999999999999999999999999999999999999998877421    124689


Q ss_pred             EEEecCCcccHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHcccChhhHHHHHHHHHH
Q psy4649         545 IYIVDRRNIALEESIRQLAQYMYDFTTLNRRQRIIQRNRTERLSDLLDWRNLGVYYKQARK  605 (755)
Q Consensus       545 i~V~~r~~~~~~e~~~~La~~l~~~~~~~~~~r~~~r~~~~~~s~~fsW~~~a~~ye~ayq  605 (755)
                      ++|.+   .++++.+++|.+++..+  .++..+..++++++  ++.|||+++++.|+.+|+
T Consensus       420 ~l~~~---~d~~~la~ai~~~l~~~--~~~~~~~~~~~~a~--~~~fsw~~~a~~~~~lY~  473 (477)
T d1rzua_         420 VQFSP---VTLDGLKQAIRRTVRYY--HDPKLWTQMQKLGM--KSDVSWEKSAGLYAALYS  473 (477)
T ss_dssp             EEESS---CSHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH--TCCCBHHHHHHHHHHHHH
T ss_pred             EEeCC---CCHHHHHHHHHHHHhhh--CCHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHH
Confidence            99944   45666666665555332  25666667776664  468999999999999997

PyMOL of d1rzua_

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}	Back information, alignment and structure

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}	Back information, alignment and structure

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}	Back information, alignment and structure