Psyllid ID: psy4683

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MQEKIPSTDAHDIEIKKEGLWSFLEDENEKRNFSSEEDEESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLAWEDTSLEITLLKK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEccccEEcccccccccccccccccccHHHEHccccccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccEccccHHHHHccccEEccccc
Coil and Loop (DISEMBL)
mqekipstdahdieIKKEGLWSfledenekrnfsseedeesdklddednvtsdtkfpcrlcsqefdTKEQRkkherkdhatqglfscdlcsytstqkYYLVKHKSRHIKDYNVFCKIcqlgflsknelnvhnikqhcaqphtcsvcKKIFvnkknltthKKIHLALDRnyqcdtyfyegnslawedTSLEITLLKK
Flexible Loop (DISEMBL)
mqekipstdahdieikkegLWSFLEDENEkrnfsseedeesdklddednvtsdtkfpcrlcsqefdtkeqrkkherkdhatqglfscdlcsyTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGnslawedtsleitllkk
Low Complexity Region (SEG)
MQEKIPSTDAHDIEIKKEGLWSFLEDENEKRNFsseedeesdklddedNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLAWEDTSLEITLLKK
Disordered region (IsUnstruct)
*********************************************************************************QGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLAWEDTSLEITL***
Disordered Region (DISOPRED)
MQEKIPSTDAHDIEIKKEGLWSFLEDENEKRNFSSEEDEESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLA*************
Disordered Region (DISEMBL)
********DAHDIEIKKEGLWSFLEDE*************************DTKFPCRLCSQEF**************ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLAWEDTSLEITLLKK
Disordered Region (DISPRO)
**EKIPSTDAHDIEIKKEGLWSFLEDENEKRNFSSEEDEESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLAWEDTS*EI*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQEKIPSTDAHDIEIKKEGLWSFLEDENEKRNFSSEEDEESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLAWEDTSLEITLLKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
P08045	1350	Zinc finger protein Xfin	N/A	N/A	0.668	0.097	0.308	8e-12
Q6ZSB9	765	Zinc finger and BTB domai	yes	N/A	0.698	0.179	0.3	9e-12
P13360	604	Protein glass OS=Drosophi	no	N/A	0.698	0.226	0.302	2e-11
Q9VQU9	744	Protein bowel OS=Drosophi	no	N/A	0.602	0.158	0.308	2e-11
Q8BXX2	756	Zinc finger and BTB domai	no	N/A	0.647	0.167	0.294	3e-11
Q96EQ9	843	Histone-lysine N-methyltr	no	N/A	0.673	0.156	0.291	4e-11
P0C6Y7	796	Histone-lysine N-methyltr	no	N/A	0.744	0.183	0.274	4e-11
Q24732	598	Protein glass OS=Drosophi	N/A	N/A	0.714	0.234	0.311	4e-11
Q8NAM6	433	Zinc finger and SCAN doma	no	N/A	0.5	0.226	0.343	4e-11
A1YFX5	433	Zinc finger and SCAN doma	N/A	N/A	0.5	0.226	0.333	7e-11

>sp|P08045|XFIN_XENLA Zinc finger protein Xfin OS=Xenopus laevis PE=1 SV=1

 Score = 70.1 bits (170), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
           T +  F C LC + F       KH R  H  +  F C  C  + T++  L+KH   H  +
Sbjct: 554 TGEKPFKCLLCKKSFSQNSDLHKHWR-IHTGEKPFPCYTCDKSFTERSALIKHHRTHTGE 612

Query: 111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY 170
               C +CQ GF+ K+ L  H+      +P+ C+ C K F+   +L  H++IH   ++ Y
Sbjct: 613 RPHKCSVCQKGFIQKSALTKHSRTHTGEKPYPCTQCGKSFIQNSDLVKHQRIHTG-EKPY 671

Query: 171 ---QCDTYFYEGNSLA 183
              +C+  F EG+SL 
Sbjct: 672 HCTECNKRFTEGSSLV 687

Binds to poly-G sequences in RNA. May function in post-translational regulation processes.
Xenopus laevis (taxid: 8355)

>sp|Q6ZSB9|ZBT49_HUMAN Zinc finger and BTB domain-containing protein 49 OS=Homo sapiens GN=ZBTB49 PE=2 SV=3

 Score = 70.1 bits (170), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 35  SEEDEESDKLDDED-NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYT 93
           +E  E+   L+D+   + S  ++ C LC + F      + H+R  H  +  F C++C   
Sbjct: 373 TERPEDPAALEDQSQTLQSQRQYACELCGKPFKHPSNLELHKR-SHTGEKPFECNICGKH 431

Query: 94  STQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNK 153
            +Q   L  H  RH  +    C+IC   F +  ++  H I     +PH C +C + F N 
Sbjct: 432 FSQAGNLQTHLRRHSGEKPYICEICGKRFAASGDVQRHIIIHSGEKPHLCDICGRGFSNF 491

Query: 154 KNLTTHKKIHLALDRNYQCD 173
            NL  HKK H A D+ + CD
Sbjct: 492 SNLKEHKKTHTA-DKVFTCD 510

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P13360|GLAS_DROME Protein glass OS=Drosophila melanogaster GN=gl PE=1 SV=2

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 5/142 (3%)

Query: 33  FSSEEDEESDKLDDEDNVTSDTKFP--CRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC 90
           F  EED   D   DE +   + K P  CRLC + +      K H R  H+ +  + C  C
Sbjct: 413 FEDEEDSNEDLDGDEGSSGGEMK-PNLCRLCGKTYARPSTLKTHLRT-HSGERPYRCPDC 470

Query: 91  SYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIF 150
           + + +Q   L  H   H       C IC   F   + +  H       +P+ CS CKK F
Sbjct: 471 NKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYRCSSCKKSF 530

Query: 151 VNKKNLTTHKKIHLALDRNYQC 172
            +   LT H +IH   ++ YQC
Sbjct: 531 SDSSTLTKHLRIHSG-EKPYQC 551

Transcription factor required for gene expression specific to photoreceptor cells.

Drosophila melanogaster (taxid: 7227)

>sp|Q9VQU9|BOWEL_DROME Protein bowel OS=Drosophila melanogaster GN=bowl PE=1 SV=1

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 2/120 (1%)

Query: 55  KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVF 114
           +F C+ C+++F        HER  H  +  +SCD+C     ++ +L  H+  H K+    
Sbjct: 237 QFICKFCNRQFTKSYNLLIHERT-HTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFK 295

Query: 115 CKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDT 174
           C  C  GF     L VH I      PH C VC + F  + NL TH   H    + Y+C +
Sbjct: 296 CTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTD-HKPYECSS 354

Putative transcription factor. Required for leg joint formation, acting downstream of Notch to pattern the leg tarsal segments. Functions in the terminal pathway during embryogenesis, acting downstream of tll in the posterior of the embryo. Acts in a hierarchy downstream of drm and lin during foregut and hindgut patterning and morphogenesis. Involved in cell rearrangement during elongation of the embryonic hindgut. Regulates expression of hindgut patterning genes to establish the small intestine region of the embryonic hindgut. Required in the foregut for spatially localized gene expression and morphogenesis of the proventriculus.

Drosophila melanogaster (taxid: 7227)

>sp|Q8BXX2|ZBT49_MOUSE Zinc finger and BTB domain-containing protein 49 OS=Mus musculus GN=Zbtb49 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 2/129 (1%)

Query: 45  DDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHK 104
           D    +    ++ C LC + F      + H+R  H  +  F C++C    +Q   L  H 
Sbjct: 375 DPSQALQPQKQYACELCGKPFKHPSNLELHKRS-HTGEKPFECNICGKHFSQAGNLQTHL 433

Query: 105 SRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHL 164
            RH  +    C+IC   F +  ++  H I     +PH C  C + F N  NL  HKK H 
Sbjct: 434 RRHSGEKPYICEICGKRFAASGDVQRHIIIHSGEKPHLCDTCGRGFSNFSNLKEHKKTHT 493

Query: 165 ALDRNYQCD 173
           A D+ + CD
Sbjct: 494 A-DKVFTCD 501

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q96EQ9|PRDM9_MOUSE Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus GN=Prdm9 PE=1 SV=2

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 2/134 (1%)

Query: 39  EESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKY 98
           ++SD +  +   T +  + CR C + F  K    KH+R  H  +  + C  C    TQK 
Sbjct: 604 QKSDLIKHQRTHTGEKPYVCRECGRGFTQKSVLIKHQR-THTGEKPYVCRECGRGFTQKS 662

Query: 99  YLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTT 158
            L+KH+  H  +    C+ C  GF +K+ L  H       +P+ C  C + F  K NL  
Sbjct: 663 VLIKHQRTHTGEKPYVCRECGRGFTAKSVLIQHQRTHTGEKPYVCRECGRGFTAKSNLIQ 722

Query: 159 HKKIHLALDRNYQC 172
           H++ H   ++ Y C
Sbjct: 723 HQRTHTG-EKPYVC 735

Histone methyltransferase that specifically trimethylates 'Lys-4' of histone H3 during meiotic prophase and is essential for proper meiotic progression. Does not have the ability to mono- and dimethylate 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Plays a central role in the transcriptional activation of genes during early meiotic prophase.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|P0C6Y7|PRDM9_RAT Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus GN=Prdm9 PE=3 SV=1

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 7/153 (4%)

Query: 39  EESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKY 98
           ++SD +  +   T +  + CR C + F  K    KH+R  H  +  + C  C    TQK 
Sbjct: 613 QKSDLIKHQRTHTGEKPYICRECGRGFTQKSDLIKHQR-THTEEKPYICRECGRGFTQKS 671

Query: 99  YLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLT 157
            L++H+  H  +    C+ C LGF  K+ L + +++ H  + P+ C  C   F  K NL 
Sbjct: 672 SLIRHQRTHTGEKPYICRECGLGFTQKSNL-IRHLRTHTGEKPYICRECGLGFTRKSNLI 730

Query: 158 THKKIHLALDRNYQCDTYFYEGNSLAWEDTSLE 190
            H++ H   ++ Y C      G  L W+ + ++
Sbjct: 731 QHQRTHTG-EKPYICREC---GQGLTWKSSLIQ 759

Histone methyltransferase that specifically trimethylates 'Lys-4' of histone H3 during meiotic prophase and is essential for proper meiotic progression. Does not have the ability to mono- and dimethylate 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Plays a central role in the transcriptional activation of genes during early meiotic prophase.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

>sp|Q24732|GLAS_DROVI Protein glass OS=Drosophila virilis GN=gl PE=3 SV=1

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 24  LEDENEKRNFSSEEDEESDKLDDEDNVTSDTKFP--CRLCSQEFDTKEQRKKHERKDHAT 81
            EDE E     S ED ++D  D E +   D K P  CRLC + +      K H R  H+ 
Sbjct: 400 FEDEEE-----SIEDGDADA-DGEGSAGGDMK-PNLCRLCGKTYARPSTLKTHLRT-HSG 451

Query: 82  QGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPH 141
           +  + C  C+ + +Q   L  H   H       C IC   F   + +  H       +P+
Sbjct: 452 ERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPY 511

Query: 142 TCSVCKKIFVNKKNLTTHKKIHLALDRNYQC 172
            CS CKK F +   LT H +IH   ++ YQC
Sbjct: 512 RCSSCKKSFSDSSTLTKHLRIHSG-EKPYQC 541

Transcription factor required for gene expression specific to photoreceptor cells.

Drosophila virilis (taxid: 7244)

>sp|Q8NAM6|ZSCA4_HUMAN Zinc finger and SCAN domain-containing protein 4 OS=Homo sapiens GN=ZSCAN4 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 74  HERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNI 133
           H++  H  Q  + C+ C        +L+ H+ RH  +    C  CQ GF   ++L VH I
Sbjct: 301 HQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI 360

Query: 134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC 172
                +P TCS+CKK F +K NL +H++IH   ++ Y C
Sbjct: 361 IHTGKKPFTCSMCKKSFSHKTNLRSHERIHTG-EKPYTC 398

Embryonic stem (ES) cell-specific transcription factor required to regulate ES cell pluripotency. Binds telomeres and plays a key role in genomic stability in ES cells by regulating telomere elongation. Acts as an activator of spontaneous telomere sister chromatid exchange (T-SCE) and telomere elongation in undifferentiated ES cells.

Homo sapiens (taxid: 9606)

>sp|A1YFX5|ZSCA4_PANPA Zinc finger and SCAN domain-containing protein 4 OS=Pan paniscus GN=ZSCAN4 PE=3 SV=1

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 74  HERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNI 133
           H++  H  +  + C+ C        +L+ H+ RH  +    C  CQ GF   ++L VH I
Sbjct: 301 HQKGSHGVRKSYKCEECPKVFKYLCHLLAHQRRHRNERPFVCPECQKGFFQISDLRVHQI 360

Query: 134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC 172
                +P TCS+CKK F +K NL +H++IH   ++ Y C
Sbjct: 361 IHTGKKPFTCSICKKSFSHKTNLRSHERIHTG-EKPYTC 398

Embryonic stem (ES) cell-specific transcription factor required to regulate ES cell pluripotency. Binds telomeres and plays a key role in genomic stability in ES cells by regulating telomere elongation. Acts as an activator of spontaneous telomere sister chromatid exchange (T-SCE) and telomere elongation in undifferentiated ES cells.

Pan paniscus (taxid: 9597)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
328715760	372	PREDICTED: zinc finger protein 502-like	0.658	0.346	0.386	1e-18
328702980	414	PREDICTED: zinc finger protein 271-like,	0.668	0.316	0.308	1e-11
432943308	550	PREDICTED: uncharacterized protein LOC10	0.571	0.203	0.336	2e-11
332028292	1642	Zinc finger protein 91 [Acromyrmex echin	0.658	0.078	0.328	2e-11
432953406	194	PREDICTED: zinc finger protein Xfin-like	0.658	0.664	0.326	2e-11
432912348	1168	PREDICTED: zinc finger protein Xfin-like	0.908	0.152	0.279	3e-11
328702649	724	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.704	0.190	0.294	4e-11
391342810	936	PREDICTED: uncharacterized protein LOC10	0.545	0.114	0.317	4e-11
345317755	388	PREDICTED: zinc finger protein 551-like	0.581	0.293	0.339	5e-11
195156251	570	GL26127 [Drosophila persimilis] gi|19411	0.637	0.219	0.301	6e-11

>gi|328715760|ref|XP_001948978.2| PREDICTED: zinc finger protein 502-like [Acyrthosiphon pisum]

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 45  DDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHK 104
           D +++    + + C  C + FDT   R+KH++++H +   +SCD C Y +  K  +  H+
Sbjct: 94  DHQNDAHPHSAYKCNCCDKTFDTMCARQKHKKEEHPSV-TYSCDTCDYRTPYKSRMQYHE 152

Query: 105 SRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHL 164
           +RH K Y+VFC  CQ GF +K+EL  H IK H A+P+ C  C K+  +K NL +H K+H 
Sbjct: 153 NRHKKVYSVFCDTCQAGFFNKDELATHEIKNHGAEPYQCDRCSKLCTSKTNLYSHMKVHT 212

Query: 165 --ALDRNYQCDT 174
             A   +YQC+T
Sbjct: 213 TSAESVSYQCET 224

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328702980|ref|XP_001947926.2| PREDICTED: zinc finger protein 271-like, partial [Acyrthosiphon pisum]

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 5/136 (3%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
           T +  +PC +C + F   +Q   H+R  H  +  + CD+C  T ++ ++L  HK  H  +
Sbjct: 158 TGEKPYPCDVCDKTFSRSQQLTVHKRT-HTGEKPYPCDVCDKTFSRNHHLTLHKRTHTGE 216

Query: 111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY 170
               C +C   F   +EL VH       +P+ C VC K F    NLT HK+ H   ++ Y
Sbjct: 217 KPYPCDVCDKWFAGSSELTVHRRTHTGEKPYPCDVCDKSFAQSNNLTIHKRTHTG-EKPY 275

Query: 171 QCDT---YFYEGNSLA 183
            CD    +F   N L 
Sbjct: 276 PCDVCDKWFAGSNELT 291

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432943308|ref|XP_004083152.1| PREDICTED: uncharacterized protein LOC101160452 [Oryzias latipes]

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
           T    F CRLC + F        H R  H+ +  FSC+ C  T +Q+ +L  H + H+ +
Sbjct: 219 TGAKMFSCRLCGKRFSQSHHLGSHMRT-HSGEKPFSCEECGQTFSQRSHLTGHMTTHMGE 277

Query: 111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH 163
              FC+ C  GF     L+ H +    ++P +CS C K F    NLT H K H
Sbjct: 278 KLFFCEFCSKGFSRSTHLSSHRVIHTGSRPFSCSECDKSFTQSSNLTRHMKTH 330

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332028292|gb|EGI68339.1| Zinc finger protein 91 [Acromyrmex echinatior]

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 2/131 (1%)

Query: 43  KLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERK-DHATQGLFSCDLCSYTSTQKYYLV 101
           KL   D V    K  C LC++ F  ++    H +  D   Q  + C +CS + + K YL 
Sbjct: 462 KLHQPDYVQPQRKHHCELCNKRFSRRQVLLMHMKTHDAGPQNEYVCTICSKSVSSKTYLA 521

Query: 102 KHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKK 161
            H+ +H  +    C +C  GF+S+N L+VH       +PH C+ CKK F  +  L  H +
Sbjct: 522 VHQRKHTGEKPHVCDVCGKGFISQNYLSVHRRTHTGEKPHQCTHCKKRFTQRTTLVVHLR 581

Query: 162 IHLALDRNYQC 172
            H   DR Y C
Sbjct: 582 GHTG-DRPYPC 591

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432953406|ref|XP_004085379.1| PREDICTED: zinc finger protein Xfin-like [Oryzias latipes]

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
           T +  FPC LC + F  +    +H  K H  +  F C LC+ T ++   L +H   H + 
Sbjct: 33  TGERPFPCHLCERSFIQRGDLLRHM-KVHTDERQFPCRLCTKTFSEDGQLSRHMRNHSRK 91

Query: 111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY 170
               CK+C+  F+ K  L  H       +P  C  C + F+N+ NLT HKK+H   +R +
Sbjct: 92  KPYSCKVCKKRFIKKTHLTAHARTHTGEKPFLCDTCGRGFINRNNLTCHKKVHTGENRGH 151

Query: 171 QCD---TY-----FYEGN 180
             D   TY     FY GN
Sbjct: 152 TLDLVITYGLSAGFYGGN 169

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432912348|ref|XP_004078886.1| PREDICTED: zinc finger protein Xfin-like [Oryzias latipes]

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 8/186 (4%)

Query: 2   QEKIPSTDAHDIEIKKEGLWSFLEDENEKRNFSSEEDEESDKLDDEDNVTSDTKFPCRLC 61
           +E++ S +   +E+K+E +  F+  E+++ N   +  E + KL    + T +  + C++C
Sbjct: 288 EEQVISEEGEKLELKQETV-DFMVTEDDQENMDPK-PEPNGKLHMRTH-TGEMPYSCKVC 344

Query: 62  SQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLG 121
            + F +      H R  H  +  F+CD+C    T   YL  H   H  +    C IC  G
Sbjct: 345 KKVFVSLRNLTHHMR-IHTGERPFTCDVCGKGFTISSYLKIHMRIHTGERPYSCDICNKG 403

Query: 122 FLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDT---YFYE 178
           F+S   L  H       +P++C VC+K F     L  H +IH   +R Y C+     F  
Sbjct: 404 FVSSGALTGHMRTHTGEKPYSCKVCQKCFFQSSYLNIHMRIHTG-ERPYSCEICKKAFIY 462

Query: 179 GNSLAW 184
            NSL +
Sbjct: 463 ANSLTY 468

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328702649|ref|XP_003241967.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein Xfin [Acyrthosiphon pisum]

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
           T +  FPC +C + F+T  +   H R+ H  +  F CD+C  + +QK  L+ H+  H  +
Sbjct: 68  TGEKPFPCDVCDKWFNTNSELMVH-RRTHTGEKPFPCDVCEKSFSQKSNLMVHRRTHTGE 126

Query: 111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY 170
               C +C   F + +EL VH       +P  C VC K F    NLT H++ H   ++ +
Sbjct: 127 KPFPCDVCDKWFNTNSELTVHRRTHTGEKPFPCDVCDKWFKTSNNLTVHRRTHTG-EKPF 185

Query: 171 QCDTYFYEGNSLAWEDTSLEITLLKK 196
            CD          W +T+ E+T+ ++
Sbjct: 186 PCDV------CDKWFNTNSELTVHRR 205

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391342810|ref|XP_003745708.1| PREDICTED: uncharacterized protein LOC100900741 [Metaseiulus occidentalis]

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 50/107 (46%)

Query: 57  PCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK 116
           PC +C + F T+++ K H R  H T    SC +C    + +  L+ H   H  D    C 
Sbjct: 386 PCDVCGKLFATQDRMKAHMRSAHQTDKNCSCSICGSGFSYRCKLLDHMRTHSGDRPFHCD 445

Query: 117 ICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH 163
           +C  GF  KN L  H +     +P +C  C + F  K  LT H++ H
Sbjct: 446 VCGRGFSQKNHLTRHTMIHTGERPFSCEFCGRGFYRKDKLTRHRRTH 492

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345317755|ref|XP_003429928.1| PREDICTED: zinc finger protein 551-like [Ornithorhynchus anatinus]

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 51/115 (44%), Gaps = 1/115 (0%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
           T +  F C  C + F  K   K H+R  H  QG FSC  C  +  QK  L  H+  H  +
Sbjct: 229 TGERPFSCPQCGKSFSQKGSLKIHQR-THGGQGPFSCAECGKSFAQKVNLTAHQRVHTGE 287

Query: 111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA 165
               C  C   F  K  L +H        P +C+ C K F  K NLT H+++H A
Sbjct: 288 RPFSCPQCGKSFSQKGSLKIHQRTHGGQGPFSCAECGKSFAQKVNLTAHQRVHAA 342

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195156251|ref|XP_002019014.1| GL26127 [Drosophila persimilis] gi|194115167|gb|EDW37210.1| GL26127 [Drosophila persimilis]

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 39  EESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKY 98
           E+   + +       T F C+ C   +    + ++HER  H     + C  CS     + 
Sbjct: 199 EQPSAVSNTGGPRPKTAFLCQYCDLGYTLPAECQQHERTAHDPHAPYCCTFCSLLFITRA 258

Query: 99  YLVKH-KSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLT 157
            L+ H KS+H  D    C  C+ GF+ +++L  H I     +P+TC+VC K F    NLT
Sbjct: 259 ALIAHIKSQHDMDRPYVCAQCRKGFVRRSDLKKHAIVHTGVRPYTCTVCTKSFSRNTNLT 318

Query: 158 THKKIH 163
            H +IH
Sbjct: 319 KHMRIH 324

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
RGD|2323352	173	LOC100363288 "mCG142312-like"	0.607	0.687	0.325	3.3e-15
RGD|621205	407	Zfp260 "zinc finger protein 26	0.612	0.294	0.330	8.8e-15
UNIPROTKB|Q15072	292	ZNF146 "Zinc finger protein OZ	0.607	0.407	0.325	9.8e-15
UNIPROTKB|Q96PE6	472	ZIM3 "Zinc finger imprinted 3"	0.607	0.252	0.341	9.9e-15
ZFIN|ZDB-GENE-030131-6002	443	zgc:162958 "zgc:162958" [Danio	0.729	0.322	0.306	1.1e-14
MGI|MGI:1347071	407	Zfp260 "zinc finger protein 26	0.612	0.294	0.330	1.5e-14
UNIPROTKB|Q3ZCT1	412	ZNF260 "Zinc finger protein 26	0.612	0.291	0.330	1.9e-14
UNIPROTKB|J9NY19	292	ZNF146 "Uncharacterized protei	0.586	0.393	0.327	2.3e-14
UNIPROTKB|F1N9T2	303	LOC100858709 "Uncharacterized	0.607	0.392	0.312	2.9e-14
UNIPROTKB|I3LFI4	292	ZNF146 "Uncharacterized protei	0.581	0.390	0.330	3e-14

RGD|2323352 LOC100363288 "mCG142312-like" [Rattus norvegicus (taxid:10116)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 40/123 (32%), Positives = 59/123 (47%)

Query:    51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
             T +  F C  C + F  K Q  +H+R  H  +  F C  C     QK  L+KH+  H  +
Sbjct:    29 TGEKPFECSDCGKAFAWKPQLLRHQRI-HTGEKPFECSECGKAFVQKVQLIKHQRHHTGE 87

Query:   111 YNVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRN 169
                 C  C+  F  K +L +H  K H  + P+TC  C K F  K +L  H+ IH  + ++
Sbjct:    88 KTYKCNGCEKAFFEKTQLMIHQ-KIHTGERPYTCGKCGKSFTRKSHLMRHEPIHTRV-KS 145

Query:   170 YQC 172
             Y+C
Sbjct:   146 YRC 148

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|621205 Zfp260 "zinc finger protein 260" [Rattus norvegicus (taxid:10116)]

 Score = 194 (73.4 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 41/124 (33%), Positives = 63/124 (50%)

Query:    51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
             T +  F C  C + F  K+   KH+   H+ +  F C+ C    +QK  L+ H+  H  +
Sbjct:   154 TGEKPFECNQCGRAFSQKQYLIKHQNV-HSGKKPFKCNECGKAFSQKENLIIHQRIHTGE 212

Query:   111 YNVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRN 169
                 CK C   F+ K+ L  H  + H  + P+TC  C K F  K NLT H+KIH+  ++ 
Sbjct:   213 KPYECKGCGKAFIQKSSLIRHQ-RSHTGEKPYTCKECGKAFSGKSNLTEHEKIHIG-EKP 270

Query:   170 YQCD 173
             Y+C+
Sbjct:   271 YKCN 274

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|Q15072 ZNF146 "Zinc finger protein OZF" [Homo sapiens (taxid:9606)]

 Score = 188 (71.2 bits), Expect = 9.8e-15, P = 9.8e-15
 Identities = 40/123 (32%), Positives = 61/123 (49%)

Query:    51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
             T +  F C  C + F  K+   KH+   H  + LF C+ C  + +QK  L+ H+  H  +
Sbjct:    39 TREKPFECNECGKAFSQKQYVIKHQNT-HTGEKLFECNECGKSFSQKENLLTHQKIHTGE 97

Query:   111 YNVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRN 169
                 CK C   F+ K+ L  H  + H  + P  C  C K F  K NLT H+KIH+  ++ 
Sbjct:    98 KPFECKDCGKAFIQKSNLIRHQ-RTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIG-EKP 155

Query:   170 YQC 172
             ++C
Sbjct:   156 FKC 158

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=TAS

GO:0008201 "heparin binding" evidence=TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|Q96PE6 ZIM3 "Zinc finger imprinted 3" [Homo sapiens (taxid:9606)]

 Score = 195 (73.7 bits), Expect = 9.9e-15, P = 9.9e-15
 Identities = 42/123 (34%), Positives = 58/123 (47%)

Query:    51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
             T +  + C +C + F  K     HE K H  +  + CDLC  T  QK  L++HK  H  +
Sbjct:   330 TGEKPYKCSICEKAFSQKSNVIDHE-KIHTGKRAYECDLCGNTFIQKKNLIQHKKIHTGE 388

Query:   111 YNVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRN 169
                 C  C   F  K+ L+ H  K H  +  + CS C K F+ K NL+ HKK H    + 
Sbjct:   389 KPYECNRCGKAFFQKSNLHSHQ-KTHSGERTYRCSECGKTFIRKLNLSLHKKTHTG-QKP 446

Query:   170 YQC 172
             Y C
Sbjct:   447 YGC 449

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-030131-6002 zgc:162958 "zgc:162958" [Danio rerio (taxid:7955)]

 Score = 194 (73.4 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 46/150 (30%), Positives = 68/150 (45%)

Query:    25 EDENEKRN-FXXXXXXXXXXXX--XXXNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHAT 81
             +D+NEK N F                    S++ FPC+ C ++F  K   + H R  H  
Sbjct:    46 KDQNEKHNDFLPDEASSVTKNTCESAEKTKSNSYFPCQECGKQFCQKSNLEAHMRI-HTR 104

Query:    82 QGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQ-P 140
             + L +CD C  + ++K Y  KH+  H K+   +C  C   F  KN L VH ++ H  + P
Sbjct:   105 ESLITCDQCGKSFSRKSYFDKHRKTHTKEKPYWCTECGKRFSQKNNLTVH-MRIHTGEKP 163

Query:   141 HTCSVCKKIFVNKKNLTTHKKIHLALDRNY 170
               C  C K F   +NL  H  +H   +R Y
Sbjct:   164 FLCQYCGKKFRQMQNLKAHIPVHTG-ERPY 192

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:1347071 Zfp260 "zinc finger protein 260" [Mus musculus (taxid:10090)]

 Score = 192 (72.6 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 41/124 (33%), Positives = 63/124 (50%)

Query:    51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
             T +  F C  C + F  K+   KH+   H+ +  F C+ C    +QK  L+ H+  H  +
Sbjct:   154 TGEKPFECSQCGRAFSQKQYLIKHQNI-HSGKKPFKCNECGKAFSQKENLIIHQRIHTGE 212

Query:   111 YNVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRN 169
                 CK C   F+ K+ L  H  + H  + P+TC  C K F  K NLT H+KIH+  ++ 
Sbjct:   213 KPYECKGCGKAFIQKSSLIRHQ-RSHTGEKPYTCKECGKAFSGKSNLTEHEKIHIG-EKP 270

Query:   170 YQCD 173
             Y+C+
Sbjct:   271 YKCN 274

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q3ZCT1 ZNF260 "Zinc finger protein 260" [Homo sapiens (taxid:9606)]

 Score = 191 (72.3 bits), Expect = 1.9e-14, P = 1.9e-14
 Identities = 41/124 (33%), Positives = 61/124 (49%)

Query:    51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
             T +  F C  C + F  K+   KH+   H  +  F C  C    +QK  L+ H+  H  +
Sbjct:   159 TGEKPFECNQCGRAFSQKQYLIKHQNI-HTGKKPFKCSECGKAFSQKENLIIHQRIHTGE 217

Query:   111 YNVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRN 169
                 CK C   F+ K+ L  H  + H  + P+TC  C K F  K NLT H+KIH+  ++ 
Sbjct:   218 KPYECKGCGKAFIQKSSLIRHQ-RSHTGEKPYTCKECGKAFSGKSNLTEHEKIHIG-EKP 275

Query:   170 YQCD 173
             Y+C+
Sbjct:   276 YKCN 279

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|J9NY19 ZNF146 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 185 (70.2 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 39/119 (32%), Positives = 60/119 (50%)

Query:    56 FPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC 115
             F C  C + F  K+   KH+   H  + LF C+ C  + +QK  L+ H+  H  +    C
Sbjct:    44 FECNECGKAFSQKQYVIKHQNT-HTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFEC 102

Query:   116 KICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD 173
             K C   F+ K+ L  H  + H  + P  C  C K F  K NLT H+KIH+  ++ ++C+
Sbjct:   103 KDCGKAFIQKSNLIRHQ-RTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIG-EKPFKCN 159

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1N9T2 LOC100858709 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 185 (70.2 bits), Expect = 2.9e-14, P = 2.9e-14
 Identities = 39/125 (31%), Positives = 60/125 (48%)

Query:    53 DTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHK--SRHIK- 109
             D KFPC LCS+ F+ +++ + H    H       C+ C      +YY  KH   +R +  
Sbjct:    44 DRKFPCHLCSRSFEKRDRLRIHVLHVHEKHRPHKCERCGKVFAYRYYRDKHLKYTRCVDR 103

Query:   110 -DYNVFCKICQLGFLSKNELNVHNIKQHCA-QPHTCSVCKKIFVNKKNLTTHKKIHLALD 167
              D    C +C   F  ++ L +H +  H   +PH CSVC K F    +L  H ++H   +
Sbjct:   104 GDRKFPCHLCSRSFEKRDRLRIHVLHVHEKHRPHKCSVCGKSFSQSSSLNKHMRVHSG-E 162

Query:   168 RNYQC 172
             R Y+C
Sbjct:   163 RPYKC 167

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3LFI4 ZNF146 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 184 (69.8 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 39/118 (33%), Positives = 59/118 (50%)

Query:    56 FPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC 115
             F C  C + F  K+   KH+   H  + LF C+ C  + +QK  L+ H+  H  +    C
Sbjct:    44 FECNECGKAFSQKQYVIKHQNT-HTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFEC 102

Query:   116 KICQLGFLSKNELNVHNIKQHCAQ-PHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC 172
             K C   F+ K+ L  H  + H  + P  C  C K F  K NLT H+KIH+  ++ ++C
Sbjct:   103 KDCGKAFIQKSNLIRHQ-RTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIG-EKPFKC 158

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.95
KOG1074|consensus	958		99.86
KOG1074|consensus	958		99.79
KOG3576|consensus	267		99.78
KOG3608|consensus	467		99.75
KOG3608|consensus	467		99.75
KOG3576|consensus	267		99.72
KOG3623|consensus	1007		99.66
KOG3623|consensus	1007		99.6
PLN03086	567	PRLI-interacting factor K; Provisional	99.35
PHA00733	128	hypothetical protein	99.3
PLN03086	567	PRLI-interacting factor K; Provisional	99.29
PHA00733	128	hypothetical protein	99.24
KOG3993|consensus	500		99.13
PHA02768	55	hypothetical protein; Provisional	99.05
PHA02768	55	hypothetical protein; Provisional	98.93
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.82
PHA00616	44	hypothetical protein	98.81
KOG3993|consensus	500		98.79
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.62
PHA00616	44	hypothetical protein	98.54
PHA00732	79	hypothetical protein	98.48
PHA00732	79	hypothetical protein	98.43
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.31
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.3
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.22
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.97
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.95
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.93
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.92
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.88
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.82
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.8
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.67
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.66
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.58
KOG2231|consensus	669		97.49
smart00355	26	ZnF_C2H2 zinc finger.	97.42
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.37
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.32
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.21
smart00355	26	ZnF_C2H2 zinc finger.	96.98
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.86
PRK04860	160	hypothetical protein; Provisional	96.75
PRK04860	160	hypothetical protein; Provisional	96.56
COG5048	467	FOG: Zn-finger [General function prediction only]	96.52
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.51
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.5
KOG2482|consensus	423		96.36
KOG2482|consensus	423		96.15
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.91
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.86
KOG1146|consensus	1406		95.8
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.78
KOG2231|consensus	669		95.68
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.23
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.73
KOG1146|consensus	1406		94.69
KOG2893|consensus	341		94.62
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.58
KOG2893|consensus	341		94.48
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.25
KOG2785|consensus	390		93.97
COG4049	65	Uncharacterized protein containing archaeal-type C	93.74
COG4049	65	Uncharacterized protein containing archaeal-type C	93.66
KOG4173|consensus	253		93.62
COG5048	467	FOG: Zn-finger [General function prediction only]	93.07
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.64
KOG2785|consensus	390		92.27
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.15
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	92.08
KOG2186|consensus	276		90.91
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.8
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.98
KOG2186|consensus	276		89.79
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.74
KOG4173|consensus	253		89.57
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.33
PHA00626	59	hypothetical protein	88.92
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	88.84
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	88.32
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.14
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	87.61
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	87.43
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	86.73
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	86.19
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	86.12
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	85.38
PRK06266	178	transcription initiation factor E subunit alpha; V	85.3
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	84.89
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	84.41
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	83.94
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	83.32
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	83.05
PRK06266	178	transcription initiation factor E subunit alpha; V	82.89
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.47
COG1592	166	Rubrerythrin [Energy production and conversion]	82.24
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	81.95
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	81.69
smart00531	147	TFIIE Transcription initiation factor IIE.	81.31
smart00531	147	TFIIE Transcription initiation factor IIE.	80.69

>KOG2462|consensus

Probab=99.97  E-value=4.5e-33  Score=197.33  Aligned_cols=132  Identities=24%  Similarity=0.449  Sum_probs=123.7

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcC---CCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHh
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHA---TQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNV  130 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~---~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  130 (196)
                      ..|+|+.||+.+.+.++|.+|. .+|-   ..+.+.|.+|++.|.....|.+|+++|.  .+++|.+||+.|..+.-|+.
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHk-Q~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHK-QTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             Cceeccccccccccccccchhh-cccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            4599999999999999999999 5563   3567999999999999999999999997  78999999999999999999


Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC---ceeccCCchhhhhhhH
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD---TYFYEGNSLAWEDTSL  189 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~---~~f~~~~~l~~H~~~~  189 (196)
                      |+|+|+||+||.|+.|+++|..+++|+.|+++|.+ .|+|+|+   ++|+..+.|.+|..+-
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~-~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSD-VKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcC-CccccCcchhhHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999999999999 8999999   9999999999998753

>KOG2462|consensus

Probab=99.95  E-value=3.2e-28  Score=172.76  Aligned_cols=136  Identities=21%  Similarity=0.387  Sum_probs=117.8

Q ss_pred             ccccccchhhhhcCCCCcccccCCCCCCCCCC---CCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccC
Q psy4683          20 LWSFLEDENEKRNFSSEEDEESDKLDDEDNVT---SDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQ   96 (196)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~   96 (196)
                      ..-+.|++|+.. .+    ..+.|..|...|-   ..+.+.|..||+.|.+..+|..|+ ++|+  .+++|.+||+.|..
T Consensus       128 ~~r~~c~eCgk~-ys----T~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHi-rTH~--l~c~C~iCGKaFSR  199 (279)
T KOG2462|consen  128 HPRYKCPECGKS-YS----TSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHI-RTHT--LPCECGICGKAFSR  199 (279)
T ss_pred             CCceeccccccc-cc----cccccchhhcccccccccccccCCCCCceeeehHHHhhHh-hccC--CCcccccccccccc
Confidence            345677777777 43    2444555544442   245689999999999999999999 6786  68999999999999


Q ss_pred             chHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHh
Q psy4683          97 KYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus        97 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      .+.|+-|+++|+|+|||.|+.|+++|.+.++|..|+++|.+.++|.|+.|+|+|...+.|.+|...-
T Consensus       200 PWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  200 PWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             hHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            9999999999999999999999999999999999999999999999999999999999999998764

>KOG1074|consensus

Probab=99.86  E-value=7.4e-23  Score=163.74  Aligned_cols=79  Identities=23%  Similarity=0.391  Sum_probs=69.8

Q ss_pred             ccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhcc---CCccccC------ceeccCCchh
Q psy4683         113 VFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLAL---DRNYQCD------TYFYEGNSLA  183 (196)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~~~C~------~~f~~~~~l~  183 (196)
                      -.|.+|.++..-.++|+.|.++|+|++||+|.+||++|.++.+|+.|+.+|--.   .-+|.|+      +.|...-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            369999999999999999999999999999999999999999999999999640   1335566      9999999999


Q ss_pred             hhhhhHhh
Q psy4683         184 WEDTSLEI  191 (196)
Q Consensus       184 ~H~~~~h~  191 (196)
                      .|++.|-.
T Consensus       686 QhIriH~~  693 (958)
T KOG1074|consen  686 QHIRIHLG  693 (958)
T ss_pred             ceEEeecC
Confidence            99988763

>KOG1074|consensus

Probab=99.79  E-value=5e-20  Score=147.77  Aligned_cols=82  Identities=24%  Similarity=0.380  Sum_probs=63.3

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCC----Cccccc---ccccccCCch
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD----YNVFCK---ICQLGFLSKN  126 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~---~C~~~f~~~~  126 (196)
                      .|.+|.+|-+..+..++|+.|. ++|+|++||+|.+||+.|.++.+|+.||..|...    ..+.|+   +|-+.|...-
T Consensus       604 dPNqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             Cccceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            4678888888888888888888 7788888888888888888888888888877543    235666   6777777666


Q ss_pred             HHHhhhhhhc
Q psy4683         127 ELNVHNIKQH  136 (196)
Q Consensus       127 ~l~~H~~~~~  136 (196)
                      .|..|.++|.
T Consensus       683 ~lpQhIriH~  692 (958)
T KOG1074|consen  683 TLPQHIRIHL  692 (958)
T ss_pred             cccceEEeec
Confidence            6666766665

>KOG3576|consensus

Probab=99.78  E-value=1.6e-19  Score=122.98  Aligned_cols=112  Identities=22%  Similarity=0.425  Sum_probs=103.1

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhh
Q psy4683          53 DTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHN  132 (196)
Q Consensus        53 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  132 (196)
                      ...|.|..|++.|.-+..|.+|+ .-|...+.+.|..||+.|.....|.+|+++|+|.+||+|..|+++|...-.|..|.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            44599999999999999999999 78999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCC-----------CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         133 IKQHCA-----------QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       133 ~~~~~~-----------~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +..+|.           +.|.|..||.+-.....+..|+..|+.
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            887753           468999999999999999999999876

>KOG3608|consensus

Probab=99.75  E-value=1.6e-19  Score=132.45  Aligned_cols=105  Identities=22%  Similarity=0.351  Sum_probs=45.4

Q ss_pred             ccCCCCcccccCchHHHHHHH-hhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcc--cccccCCchhHHHHHH
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKS-RHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSV--CKKIFVNKKNLTTHKK  161 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~  161 (196)
                      |+|+.|+.+....+.|.+|++ .|...+||+|+.|+..+...+.|.+|...|. +..|.|..  |..+|+....+.+|++
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~  342 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFL  342 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHH
Confidence            333344333333334444433 2333444444444444444444444444333 33444433  4444444444444444


Q ss_pred             Hhhcc--CCccccC---ceeccCCchhhhhhhHh
Q psy4683         162 IHLAL--DRNYQCD---TYFYEGNSLAWEDTSLE  190 (196)
Q Consensus       162 ~h~~~--~~~~~C~---~~f~~~~~l~~H~~~~h  190 (196)
                      -++.+  ..+|.|.   +.|++...|-.|++..|
T Consensus       343 evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  343 EVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             HhccCCCCCceeeecchhhhccchhHHHHHHHhh
Confidence            43311  2234444   55555555555554444

>KOG3608|consensus

Probab=99.75  E-value=1.2e-18  Score=127.86  Aligned_cols=149  Identities=20%  Similarity=0.367  Sum_probs=133.8

Q ss_pred             cccCCCCCCCCCCCCCcccccccccccCCHHHHHHHHHhhc-CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccc
Q psy4683          39 EESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDH-ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKI  117 (196)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  117 (196)
                      +...+..|.+.|++++..-|+.||..|.+...|-.|.++.- ....+|.|..|.+.|.+...|..|++.|.  ..|+|+.
T Consensus       191 ~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCpl  268 (467)
T KOG3608|consen  191 NKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPL  268 (467)
T ss_pred             cHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccc
Confidence            56778899999999999999999999999999999985432 34578999999999999999999999996  6799999


Q ss_pred             cccccCCchHHHhhhhhhc-CCCCccCcccccccCCchhHHHHHHHhhccCCccccC-----ceeccCCchhhhhhhHhh
Q psy4683         118 CQLGFLSKNELNVHNIKQH-CAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD-----TYFYEGNSLAWEDTSLEI  191 (196)
Q Consensus       118 C~~~f~~~~~l~~H~~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~-----~~f~~~~~l~~H~~~~h~  191 (196)
                      |+.+....+.|.+|++.-+ ..+||+|..|++.|.+.+.|.+|..+|..  ..|.|.     ++|.+.-+|.+|++-||-
T Consensus       269 Cdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~--~~y~C~h~~C~~s~r~~~q~~~H~~evhE  346 (467)
T KOG3608|consen  269 CDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK--TVYQCEHPDCHYSVRTYTQMRRHFLEVHE  346 (467)
T ss_pred             cccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccc--cceecCCCCCcHHHHHHHHHHHHHHHhcc
Confidence            9999999999999998755 57899999999999999999999999874  678887     889999999999999983

>KOG3576|consensus

Probab=99.72  E-value=9.9e-19  Score=119.15  Aligned_cols=110  Identities=22%  Similarity=0.358  Sum_probs=98.1

Q ss_pred             CCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHH
Q psy4683          82 QGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKK  161 (196)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  161 (196)
                      ...|.|.+|++.|.....|.+|++-|...+.+.|..||+.|.+...|.+|.++|+|.+||+|..|+++|..+-.|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            45699999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             Hhhc----------cCCccccC---ceeccCCchhhhhhhHhh
Q psy4683         162 IHLA----------LDRNYQCD---TYFYEGNSLAWEDTSLEI  191 (196)
Q Consensus       162 ~h~~----------~~~~~~C~---~~f~~~~~l~~H~~~~h~  191 (196)
                      .-+|          ..+.|.|.   ++-.....+..|+..+|-
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            8665          24667777   555566778888888873

>KOG3623|consensus

Probab=99.66  E-value=3.1e-17  Score=130.27  Aligned_cols=108  Identities=27%  Similarity=0.490  Sum_probs=90.8

Q ss_pred             ccccccccccCCHHHHHHHHHhhcC-CCCCccCCCCcccccCchHHHHHHHhhcCC-------------Ccccccccccc
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHA-TQGLFSCDLCSYTSTQKYYLVKHKSRHIKD-------------YNVFCKICQLG  121 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------~~~~C~~C~~~  121 (196)
                      ..|..|++++.....|+.|+.-.|. .+..|.|..|..+|.++..|.+|+..|...             +-|+|..||++
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            6899999999999999999965563 445699999999999999999999988643             34788888888


Q ss_pred             cCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHh
Q psy4683         122 FLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       122 f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      |+.+-.|+.|+|+|.|++||.|+.|+|.|+....+..|+...
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSK  332 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSK  332 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccccccc
Confidence            888888888888888888888888888888888888887553

>KOG3623|consensus

Probab=99.60  E-value=5.1e-16  Score=123.52  Aligned_cols=79  Identities=22%  Similarity=0.453  Sum_probs=46.2

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhh
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNI  133 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  133 (196)
                      .+|.|+.|+++|.-.+.|.+|. -.|+|.+||+|.+|.+.|..+..|..|+|.|.|++||.|+.|++.|...+....||.
T Consensus       893 gmyaCDqCDK~FqKqSSLaRHK-YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  893 GMYACDQCDKAFQKQSSLARHK-YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             ccchHHHHHHHHHhhHHHHHhh-hhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            4556666666666566666665 445566666666666666666566666666666666666556655555555555543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.35  E-value=1.9e-12  Score=103.07  Aligned_cols=128  Identities=16%  Similarity=0.305  Sum_probs=100.0

Q ss_pred             ccccccccccCCHHHHHHHHHhhcC-------------------CCCCccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHA-------------------TQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      -.|..|..... ..+|..|. ....                   .+..+.|+.|++.|. ...|..|+..++  +++.|+
T Consensus       408 V~C~NC~~~i~-l~~l~lHe-~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp  482 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHE-AYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP  482 (567)
T ss_pred             EECCCCCCccc-hhHHHHHH-hhCCCcceeCCcccccceeeccccccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC
Confidence            46888877764 44556776 2222                   124578999999996 678999999885  789999


Q ss_pred             ccccccCCchHHHhhhhhhcCCCCccCcccccccCC----------chhHHHHHHHhhccCCccccC--ceeccCCchhh
Q psy4683         117 ICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVN----------KKNLTTHKKIHLALDRNYQCD--TYFYEGNSLAW  184 (196)
Q Consensus       117 ~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~----------~~~l~~H~~~h~~~~~~~~C~--~~f~~~~~l~~  184 (196)
                       |+..+ ....|..|+..|...+++.|+.|++.|..          .+.|..|..++ | .+++.|.  ......-.|..
T Consensus       483 -Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G-~rt~~C~~Cgk~Vrlrdm~~  558 (567)
T PLN03086        483 -CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-G-SRTAPCDSCGRSVMLKEMDI  558 (567)
T ss_pred             -CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-C-CcceEccccCCeeeehhHHH
Confidence             99755 67899999999999999999999999952          35899999886 6 7999988  45555678999


Q ss_pred             hhhhHhhh
Q psy4683         185 EDTSLEIT  192 (196)
Q Consensus       185 H~~~~h~~  192 (196)
                      |+..+|.+
T Consensus       559 H~~~~h~~  566 (567)
T PLN03086        559 HQIAVHQK  566 (567)
T ss_pred             HHHHhhcC
Confidence            99988854

>PHA00733 hypothetical protein

Probab=99.30  E-value=2.2e-12  Score=84.63  Aligned_cols=82  Identities=18%  Similarity=0.184  Sum_probs=51.0

Q ss_pred             CCCccCCCCcccccCchHHHHH--HH---hhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhH
Q psy4683          82 QGLFSCDLCSYTSTQKYYLVKH--KS---RHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNL  156 (196)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l  156 (196)
                      .+++.|.+|...|.+...|..+  ++   .+.+.++|.|..|++.|.....|..|++.+  ..+|.|..|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            4556666666555554444443  11   222356677777777777777777776654  3457777777777777777


Q ss_pred             HHHHHHhhc
Q psy4683         157 TTHKKIHLA  165 (196)
Q Consensus       157 ~~H~~~h~~  165 (196)
                      ..|+...++
T Consensus       116 ~~H~~~~h~  124 (128)
T PHA00733        116 LDHVCKKHN  124 (128)
T ss_pred             HHHHHHhcC
Confidence            777776654

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.29  E-value=8.2e-12  Score=99.56  Aligned_cols=104  Identities=17%  Similarity=0.361  Sum_probs=85.9

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCC---------
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLS---------  124 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~---------  124 (196)
                      ..+.|+.|++.|. ...|..|+.. +.  .++.|+ ||+.+ .+..|..|+..|.+.+++.|..|+..+..         
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~-~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d  525 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKV-FH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRD  525 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHh-cC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhh
Confidence            4578999999996 6889999954 42  789999 99755 67899999999999999999999998842         


Q ss_pred             -chHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         125 -KNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       125 -~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                       .+.|..|...+ +.+++.|..||+.+..+ .|..|+..-|.
T Consensus       526 ~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        526 RLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence             35899998885 89999999999988765 56777766443

>PHA00733 hypothetical protein

Probab=99.24  E-value=6.4e-12  Score=82.46  Aligned_cols=90  Identities=12%  Similarity=0.177  Sum_probs=72.8

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHH--H--HhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccccccc
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKH--E--RKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGF  122 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H--~--~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  122 (196)
                      -......+++.|..|.+.|.....|..+  +  ...+.+.+||.|+.|++.|.....|..|++.+  ..++.|..|+++|
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F  109 (128)
T PHA00733         32 HSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEF  109 (128)
T ss_pred             hcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCcc
Confidence            3333445679999999999887776665  1  12334578999999999999999999999976  3579999999999


Q ss_pred             CCchHHHhhhhhhcCC
Q psy4683         123 LSKNELNVHNIKQHCA  138 (196)
Q Consensus       123 ~~~~~l~~H~~~~~~~  138 (196)
                      .....|..|+...++.
T Consensus       110 ~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        110 RNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCHHHHHHHHHHhcCc
Confidence            9999999999887753

>KOG3993|consensus

Probab=99.13  E-value=1.1e-11  Score=93.52  Aligned_cols=61  Identities=15%  Similarity=0.296  Sum_probs=50.5

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      .+.+..+.|.|..|...|.+...|.+|. -...-.-.|+|+.|++.|....+|..|.++|..
T Consensus       260 ~i~n~iGdyiCqLCK~kYeD~F~LAQHr-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKP  320 (500)
T KOG3993|consen  260 GIPNVIGDYICQLCKEKYEDAFALAQHR-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKP  320 (500)
T ss_pred             cCcccHHHHHHHHHHHhhhhHHHHhhcc-CCeeEEeeecCCcccccccCchhhhhhhcccCC
Confidence            3344445699999999999999999998 444444569999999999999999999999863

>PHA02768 hypothetical protein; Provisional

Probab=99.05  E-value=8.6e-11  Score=64.09  Aligned_cols=39  Identities=23%  Similarity=0.408  Sum_probs=17.0

Q ss_pred             ccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCc
Q psy4683         113 VFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNK  153 (196)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~  153 (196)
                      |.|+.||+.|...++|..|+++|+  ++|+|..|++.|...
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~   44 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRT   44 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccc
Confidence            344444444444444444444444  344444444444433

>PHA02768 hypothetical protein; Provisional

Probab=98.93  E-value=6.2e-10  Score=60.74  Aligned_cols=40  Identities=15%  Similarity=0.372  Sum_probs=23.4

Q ss_pred             ccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCch
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKY   98 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~   98 (196)
                      |.|+.||+.|....+|..|+ +.|.  ++++|..|++.|...+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~-r~H~--k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHL-RKHN--TNLKLSNCKRISLRTG   45 (55)
T ss_pred             cCcchhCCeeccHHHHHHHH-HhcC--CcccCCcccceecccc
Confidence            56666666666666666666 3344  4566666666655443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.82  E-value=2.2e-09  Score=50.17  Aligned_cols=24  Identities=29%  Similarity=0.533  Sum_probs=16.7

Q ss_pred             HHhhhhhhcCCCCccCcccccccC
Q psy4683         128 LNVHNIKQHCAQPHTCSVCKKIFV  151 (196)
Q Consensus       128 l~~H~~~~~~~~~~~C~~C~~~f~  151 (196)
                      |..|+++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            566777777777777777777665

...

>PHA00616 hypothetical protein

Probab=98.81  E-value=2.1e-09  Score=55.81  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=30.5

Q ss_pred             CccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      ||.|+.||+.|...+.|.+|++.|+| ++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg-~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK-QNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC-CCcccee
Confidence            68999999999999999999999999 8999988

>KOG3993|consensus

Probab=98.79  E-value=7.8e-10  Score=83.80  Aligned_cols=81  Identities=22%  Similarity=0.420  Sum_probs=71.1

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCC--------------------------
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCA--------------------------  138 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--------------------------  138 (196)
                      |.|..|...|.....|.+|.-....-..|+|+.|+++|.-..+|..|++.|.-.                          
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            999999999999999999987666667899999999999999999999987611                          


Q ss_pred             -------CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 -------QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 -------~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                             ..|.|..|++.|++...|+.|+-+|+.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                   138899999999999999999988874

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.62  E-value=2.3e-08  Score=46.71  Aligned_cols=24  Identities=17%  Similarity=0.552  Sum_probs=13.2

Q ss_pred             HHHHHHhhcCCCCCccCCCCccccc
Q psy4683          71 RKKHERKDHATQGLFSCDLCSYTST   95 (196)
Q Consensus        71 l~~H~~~~h~~~~~~~C~~C~~~f~   95 (196)
                      |.+|+ ..|++++||.|+.|++.|.
T Consensus         2 l~~H~-~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHM-RTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHH-HHHSSSSSEEESSSSEEES
T ss_pred             HHHHh-hhcCCCCCCCCCCCcCeeC
Confidence            45555 3455555555555555553

...

>PHA00616 hypothetical protein

Probab=98.54  E-value=4.3e-08  Score=50.95  Aligned_cols=31  Identities=16%  Similarity=0.216  Sum_probs=13.4

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |+|+.||+.|.+...|..|++.|++++++.|
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            3444444444444444444444444444433

>PHA00732 hypothetical protein

Probab=98.48  E-value=1.2e-07  Score=56.63  Aligned_cols=47  Identities=28%  Similarity=0.504  Sum_probs=29.0

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhh
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      ||.|..|++.|.+..+|..|++..|.   ++.|+.|++.|.   .+..|....
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            46677777777777777777632343   346777777665   455565443

>PHA00732 hypothetical protein

Probab=98.43  E-value=1.3e-07  Score=56.48  Aligned_cols=36  Identities=28%  Similarity=0.767  Sum_probs=17.0

Q ss_pred             ccCCCCcccccCchHHHHHHHh-hcCCCcccccccccccC
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSR-HIKDYNVFCKICQLGFL  123 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~  123 (196)
                      |.|..|++.|.....|..|++. |.   ++.|+.|++.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC
Confidence            4455555555555555555542 32   124444444444

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.31  E-value=1.6e-06  Score=48.14  Aligned_cols=51  Identities=22%  Similarity=0.474  Sum_probs=35.0

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCC-CCccCCCCcccccCchHHHHHHHhhc
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQ-GLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      .|.|+.|++. .+...|..|....|..+ +.+.||+|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            3778888884 45677888876767654 4577888887544  37777776554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.30  E-value=1.1e-06  Score=48.76  Aligned_cols=49  Identities=22%  Similarity=0.402  Sum_probs=25.9

Q ss_pred             ccccccccccCCchHHHhhhhhhcC--CCCccCcccccccCCchhHHHHHHHhh
Q psy4683         113 VFCKICQLGFLSKNELNVHNIKQHC--AQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       113 ~~C~~C~~~f~~~~~l~~H~~~~~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      |.|+.|++ ..+...|..|....+.  .+.+.||+|...+.  .+|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45566665 3444555555554443  23456666665433  36666666554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.22  E-value=6.9e-07  Score=40.39  Aligned_cols=23  Identities=39%  Similarity=0.775  Sum_probs=17.8

Q ss_pred             ccCcccccccCCchhHHHHHHHh
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56788888888888888887764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.97  E-value=4.7e-06  Score=37.83  Aligned_cols=24  Identities=33%  Similarity=0.714  Sum_probs=17.4

Q ss_pred             ccCcccccccCCchhHHHHHHHhh
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      |.|++|++.|.+...|..|+.+|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578888888888888888887764

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.95  E-value=5.2e-06  Score=37.43  Aligned_cols=19  Identities=32%  Similarity=0.828  Sum_probs=9.2

Q ss_pred             cccccccccCCHHHHHHHH
Q psy4683          57 PCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        57 ~C~~C~~~f~~~~~l~~H~   75 (196)
                      .|+.|++.|.+...|..|+
T Consensus         2 ~C~~C~~~f~~~~~l~~H~   20 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHM   20 (23)
T ss_dssp             EETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHH
Confidence            4444444444444444444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.93  E-value=4.9e-06  Score=52.37  Aligned_cols=24  Identities=25%  Similarity=0.629  Sum_probs=16.4

Q ss_pred             CccCcccccccCCchhHHHHHHHh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            567777777777777777777764

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.92  E-value=5.8e-06  Score=52.03  Aligned_cols=74  Identities=19%  Similarity=0.342  Sum_probs=22.2

Q ss_pred             cccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhc
Q psy4683          57 PCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQH  136 (196)
Q Consensus        57 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  136 (196)
                      +|..|+..|.+...|..|+...|.-..+     ....+.....+....+... ...+.|..|++.|.+...|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Cccccccccccccccccccccccccccc-----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            4899999999999999999777754333     1112223344444444332 236899999999999999999999753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.88  E-value=4e-06  Score=61.89  Aligned_cols=70  Identities=21%  Similarity=0.294  Sum_probs=47.3

Q ss_pred             CCCccCCC--CcccccCchHHHHHHHhhcC-CCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHH
Q psy4683          82 QGLFSCDL--CSYTSTQKYYLVKHKSRHIK-DYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTT  158 (196)
Q Consensus        82 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~  158 (196)
                      .+||+|++  |.+.|.+...|..|+..-+. .+...          ......+.......+||+|.+|+|.|.+..+|.-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~----------~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHE----------NPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCC----------CCCccccccccccCCceeccccchhhccCcccee
Confidence            48888876  88888888888888764321 11110          0112223333456789999999999999999988


Q ss_pred             HHH
Q psy4683         159 HKK  161 (196)
Q Consensus       159 H~~  161 (196)
                      |..
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.82  E-value=4.9e-06  Score=39.12  Aligned_cols=25  Identities=36%  Similarity=0.712  Sum_probs=18.2

Q ss_pred             CccCcccccccCCchhHHHHHHHhh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777776664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.80  E-value=1.3e-05  Score=42.60  Aligned_cols=32  Identities=28%  Similarity=0.604  Sum_probs=22.7

Q ss_pred             CCCCccCcccccccCCchhHHHHHHHhhccCCc
Q psy4683         137 CAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRN  169 (196)
Q Consensus       137 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  169 (196)
                      .++|..||+|+..++...+|++|+.+.|+ .+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~-~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHF-KKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTT-TS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhc-ccC
Confidence            46789999999999999999999999887 554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.67  E-value=1.6e-05  Score=58.87  Aligned_cols=70  Identities=20%  Similarity=0.364  Sum_probs=45.6

Q ss_pred             CCCcccccc--cccccCCHHHHHHHHHhhcCCCCCccCC--CCcccccCchHHHHHHHhhcCCCcccccccccccCCchH
Q psy4683          52 SDTKFPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNE  127 (196)
Q Consensus        52 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  127 (196)
                      +++||+|+.  |++.|.+...|+-|+.-.|...+...-+  +--..|            -...+||.|..|++.|+...+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F------------~~~~KPYrCevC~KRYKNlNG  413 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF------------SAKDKPYRCEVCDKRYKNLNG  413 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc------------cccCCceeccccchhhccCcc
Confidence            358999997  9999999999999985444322211111  001111            234577888888888877777


Q ss_pred             HHhhhh
Q psy4683         128 LNVHNI  133 (196)
Q Consensus       128 l~~H~~  133 (196)
                      |+-|+.
T Consensus       414 LKYHr~  419 (423)
T COG5189         414 LKYHRK  419 (423)
T ss_pred             ceeccc
Confidence            777754

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.66  E-value=4e-05  Score=34.61  Aligned_cols=20  Identities=30%  Similarity=0.885  Sum_probs=9.8

Q ss_pred             ccccccccccCCHHHHHHHH
Q psy4683          56 FPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~   75 (196)
                      |.|+.|+..|.+...|..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~   20 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHM   20 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHH
Confidence            34555555555555555555

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.58  E-value=4.7e-05  Score=35.67  Aligned_cols=21  Identities=24%  Similarity=0.689  Sum_probs=14.5

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      +|.|..|++.|.+..+|..|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~   21 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHK   21 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCccCCccCChhHHHHHh
Confidence            366777777777777777776

>KOG2231|consensus

Probab=97.49  E-value=0.00028  Score=58.06  Aligned_cols=126  Identities=26%  Similarity=0.425  Sum_probs=86.5

Q ss_pred             ccccccccccC---------------CHHHHHHHHHhhcCCCCCccCCCCcc---------cccCchHHHHHHHhhcC-C
Q psy4683          56 FPCRLCSQEFD---------------TKEQRKKHERKDHATQGLFSCDLCSY---------TSTQKYYLVKHKSRHIK-D  110 (196)
Q Consensus        56 ~~C~~C~~~f~---------------~~~~l~~H~~~~h~~~~~~~C~~C~~---------~f~~~~~l~~H~~~h~~-~  110 (196)
                      +.|..|+..|.               ....|+.|+...|.   .+.|.+|-.         ..-+...|..|+..--. +
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~---~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~  176 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK---LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDD  176 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh---hhccccccccceeeeeeeehehHHHHHHHHhcCCCcc
Confidence            57888877773               78889999976664   356666532         22345677777764221 2


Q ss_pred             Cc----ccccccccccCCchHHHhhhhhhcCCCCccCccc------ccccCCchhHHHHHHHhhccCCc-cccC-ceecc
Q psy4683         111 YN----VFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVC------KKIFVNKKNLTTHKKIHLALDRN-YQCD-TYFYE  178 (196)
Q Consensus       111 ~~----~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~-~~C~-~~f~~  178 (196)
                      +.    -.|..|...|.....|.+|++.++    |.|..|      +..|.....|..|.+.+|- --- -.|. +.|..
T Consensus       177 ~s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~Hf-lCE~~~C~~~~f~~  251 (669)
T KOG2231|consen  177 ESCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHF-LCEEEFCRTKKFYV  251 (669)
T ss_pred             ccccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCc-cccccccccceeee
Confidence            21    368999999999999999998777    556666      4668888899999998764 111 2455 77777


Q ss_pred             CCchhhhhhhH
Q psy4683         179 GNSLAWEDTSL  189 (196)
Q Consensus       179 ~~~l~~H~~~~  189 (196)
                      ...+.+|++.|
T Consensus       252 ~~~~ei~lk~~  262 (669)
T KOG2231|consen  252 AFELEIELKAH  262 (669)
T ss_pred             hhHHHHHHHhh
Confidence            76777776633

>smart00355 ZnF_C2H2 zinc finger

Probab=97.42  E-value=0.00011  Score=33.66  Aligned_cols=24  Identities=33%  Similarity=0.692  Sum_probs=20.5

Q ss_pred             ccCcccccccCCchhHHHHHHHhh
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            578899999999999999988764

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.37  E-value=0.0001  Score=55.35  Aligned_cols=133  Identities=21%  Similarity=0.372  Sum_probs=93.0

Q ss_pred             ccccc--cccccCCHHHHHHHHHhhcCCCCCccCCCCc---cccc------CchHHHHHHHhhcCCCcc----ccccccc
Q psy4683          56 FPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCDLCS---YTST------QKYYLVKHKSRHIKDYNV----FCKICQL  120 (196)
Q Consensus        56 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~---~~f~------~~~~l~~H~~~h~~~~~~----~C~~C~~  120 (196)
                      |.|+.  |.........|..|.+..|.   .+.|.+|-   +.|+      ....|..|...-..+..|    .|..|..
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~---~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG---FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC---cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            67775  77788888899999976664   36788774   3443      345566665433323233    5999999


Q ss_pred             ccCCchHHHhhhhhhcCCCCccCcccccc-------cCCchhHHHHHHHhhccCCccccC----ceeccCCchhhhhhhH
Q psy4683         121 GFLSKNELNVHNIKQHCAQPHTCSVCKKI-------FVNKKNLTTHKKIHLALDRNYQCD----TYFYEGNSLAWEDTSL  189 (196)
Q Consensus       121 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~~C~----~~f~~~~~l~~H~~~~  189 (196)
                      .|.+...|..|.+..+.    .|.+|++.       |.+...|.+|.+.-+-.=..-.|.    +.|.....|+.|+...
T Consensus       229 ~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc~~~k~~vf~~~~el~~h~~~~  304 (493)
T COG5236         229 YFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTCRVGKCYVFPYHTELLEHLTRF  304 (493)
T ss_pred             eecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEEecCcEEEeccHHHHHHHHHHH
Confidence            99999999999887763    46666654       777778888877644211111233    7889999999999999


Q ss_pred             hhhhhc
Q psy4683         190 EITLLK  195 (196)
Q Consensus       190 h~~~~~  195 (196)
                      |+..+|
T Consensus       305 h~~~~~  310 (493)
T COG5236         305 HKVNAR  310 (493)
T ss_pred             hhcccc
Confidence            998775

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.32  E-value=0.00011  Score=39.12  Aligned_cols=27  Identities=19%  Similarity=0.289  Sum_probs=10.0

Q ss_pred             CCCccCCCCcccccCchHHHHHHHhhc
Q psy4683          82 QGLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      +.|-.|++|+..+....+|.+|+..++
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHh
Confidence            334444444444444444444444333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.21  E-value=0.00026  Score=32.09  Aligned_cols=24  Identities=33%  Similarity=0.451  Sum_probs=17.2

Q ss_pred             ccCcccccccCCchhHHHHHHHhhc
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |.|+.|++... ...|..|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57888888887 7788888888653

>smart00355 ZnF_C2H2 zinc finger

Probab=96.98  E-value=0.00087  Score=30.53  Aligned_cols=19  Identities=32%  Similarity=0.646  Sum_probs=9.3

Q ss_pred             cccccccccCCHHHHHHHH
Q psy4683          57 PCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        57 ~C~~C~~~f~~~~~l~~H~   75 (196)
                      .|..|++.|.....|..|+
T Consensus         2 ~C~~C~~~f~~~~~l~~H~   20 (26)
T smart00355        2 RCPECGKVFKSKSALKEHM   20 (26)
T ss_pred             CCCCCcchhCCHHHHHHHH
Confidence            3444555555554554444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.86  E-value=0.00035  Score=31.95  Aligned_cols=23  Identities=26%  Similarity=0.664  Sum_probs=15.4

Q ss_pred             ccCcccccccCCchhHHHHHHHh
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      |.|..|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45677777777777777776543

>PRK04860 hypothetical protein; Provisional

Probab=96.75  E-value=0.00075  Score=46.13  Aligned_cols=29  Identities=21%  Similarity=0.722  Sum_probs=14.3

Q ss_pred             CccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      +|.|. |+.   ....+.+|.++|.+ +++|.|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g-~~~YrC~  147 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRG-EAVYRCR  147 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcC-CccEECC
Confidence            45554 544   44444555555555 4555544

>PRK04860 hypothetical protein; Provisional

Probab=96.56  E-value=0.0015  Score=44.61  Aligned_cols=38  Identities=26%  Similarity=0.382  Sum_probs=31.1

Q ss_pred             cccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCc
Q psy4683         112 NVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNK  153 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~  153 (196)
                      +|.|. |+.   ....+.+|.++++++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58887 887   566788899999999999999999887654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.52  E-value=0.00049  Score=54.62  Aligned_cols=131  Identities=24%  Similarity=0.344  Sum_probs=89.2

Q ss_pred             CcccccccccccCCHHHHHHHHHh-hcCCC--CCccCC--CCcccccCchHHHHHHHhhcCCCcccccc--cc-------
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERK-DHATQ--GLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKI--CQ-------  119 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~-------  119 (196)
                      .++.|..|...|.....+.+|.+. .|.++  +++.|+  .|++.|.....+..|...|.+..++.+..  +.       
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            368899999999999999999942 79998  999999  79999999999999998888766554433  22       


Q ss_pred             ----------------------------cccCCchHHHhhhhhhcCCC--CccCcccccccCCchhHHHHHHHhhccCCc
Q psy4683         120 ----------------------------LGFLSKNELNVHNIKQHCAQ--PHTCSVCKKIFVNKKNLTTHKKIHLALDRN  169 (196)
Q Consensus       120 ----------------------------~~f~~~~~l~~H~~~~~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  169 (196)
                                                  ..+.....+..|...+...+  .+.+..|...|.....+..|++.|.. ..+
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  446 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTN-HAP  446 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccccccc-CCc
Confidence                                        22222222222222222222  35567788888888888888888876 555


Q ss_pred             cccC--ceeccCCchhhh
Q psy4683         170 YQCD--TYFYEGNSLAWE  185 (196)
Q Consensus       170 ~~C~--~~f~~~~~l~~H  185 (196)
                      +-|.  +.|.....+..|
T Consensus       447 ~~~~~~~~~~~~~~~~~~  464 (467)
T COG5048         447 LLCSILKSFRRDLDLSNH  464 (467)
T ss_pred             eeeccccccchhhhhhcc
Confidence            5555  444444444433

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.51  E-value=0.0014  Score=29.87  Aligned_cols=18  Identities=22%  Similarity=0.826  Sum_probs=8.0

Q ss_pred             ccccccccCCHHHHHHHH
Q psy4683          58 CRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        58 C~~C~~~f~~~~~l~~H~   75 (196)
                      |..|+..|.+...+..|+
T Consensus         3 C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    3 CDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             ETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCcCCHHHHHHHH
Confidence            444444444444444443

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.50  E-value=0.0021  Score=28.95  Aligned_cols=20  Identities=40%  Similarity=0.810  Sum_probs=7.8

Q ss_pred             cCCCCcccccCchHHHHHHHh
Q psy4683          86 SCDLCSYTSTQKYYLVKHKSR  106 (196)
Q Consensus        86 ~C~~C~~~f~~~~~l~~H~~~  106 (196)
                      +|+.|+.... ...|..|++.
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHh
Confidence            3444444443 4444444443

>KOG2482|consensus

Probab=96.36  E-value=0.007  Score=45.68  Aligned_cols=130  Identities=18%  Similarity=0.270  Sum_probs=80.7

Q ss_pred             ccccccccccc-CCHHHHHHHHHhhcCCC---------------------CCccCCCCcccccCchHHHHHHHh--hcCC
Q psy4683          55 KFPCRLCSQEF-DTKEQRKKHERKDHATQ---------------------GLFSCDLCSYTSTQKYYLVKHKSR--HIKD  110 (196)
Q Consensus        55 ~~~C~~C~~~f-~~~~~l~~H~~~~h~~~---------------------~~~~C~~C~~~f~~~~~l~~H~~~--h~~~  110 (196)
                      ..+|-.|...+ +.++.+..|+-..|.-.                     ..+.|-.|.+.|+.+..|..||+.  |...
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrri  223 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRI  223 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCccc
Confidence            36799997655 67888888887666421                     127999999999999999999984  3322


Q ss_pred             Cc--------ccc--cccccccCCchHHHhhh--hhh---------------cCCCC--ccCcccccccCCchhHHHHHH
Q psy4683         111 YN--------VFC--KICQLGFLSKNELNVHN--IKQ---------------HCAQP--HTCSVCKKIFVNKKNLTTHKK  161 (196)
Q Consensus       111 ~~--------~~C--~~C~~~f~~~~~l~~H~--~~~---------------~~~~~--~~C~~C~~~f~~~~~l~~H~~  161 (196)
                      .|        |.=  ..-|++..   ....+.  .+-               .+..+  ..|-.|.....+...|..||.
T Consensus       224 nPknreYDkfyiINY~ev~ks~t---~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk  300 (423)
T KOG2482|consen  224 NPKNREYDKFYIINYLEVGKSWT---IVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMK  300 (423)
T ss_pred             CCCccccceEEEEeHhhcCCccc---hhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHH
Confidence            22        100  00111110   001111  000               01112  478888888888888888888


Q ss_pred             Hhhc-----------------------------cCCccccCceeccCCchhhhhh
Q psy4683         162 IHLA-----------------------------LDRNYQCDTYFYEGNSLAWEDT  187 (196)
Q Consensus       162 ~h~~-----------------------------~~~~~~C~~~f~~~~~l~~H~~  187 (196)
                      +-|.                             ..+++.|.-.|.....|+.||.
T Consensus       301 ~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  301 IVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             HHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            7552                             1245567788889999999984

>KOG2482|consensus

Probab=96.15  E-value=0.022  Score=43.15  Aligned_cols=66  Identities=18%  Similarity=0.283  Sum_probs=40.6

Q ss_pred             HHHHHHHhhcCCCCCccCCCCccccc-CchHHHHHHHhhcC---C-------------------CcccccccccccCCch
Q psy4683          70 QRKKHERKDHATQGLFSCDLCSYTST-QKYYLVKHKSRHIK---D-------------------YNVFCKICQLGFLSKN  126 (196)
Q Consensus        70 ~l~~H~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~---~-------------------~~~~C~~C~~~f~~~~  126 (196)
                      .|.++++..-.......|-.|...+. +++.+..|+-.-++   +                   ..+.|-.|.+.|..+.
T Consensus       130 aLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkn  209 (423)
T KOG2482|consen  130 ALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKN  209 (423)
T ss_pred             HHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcH
Confidence            34555533322334567989987664 45666677643221   1                   1257888888888888


Q ss_pred             HHHhhhhhh
Q psy4683         127 ELNVHNIKQ  135 (196)
Q Consensus       127 ~l~~H~~~~  135 (196)
                      .|..||+..
T Consensus       210 tLkeHMrkK  218 (423)
T KOG2482|consen  210 TLKEHMRKK  218 (423)
T ss_pred             HHHHHHHhc
Confidence            888888753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.91  E-value=0.0044  Score=28.81  Aligned_cols=20  Identities=35%  Similarity=0.750  Sum_probs=15.4

Q ss_pred             ccccccccccCCHHHHHHHH
Q psy4683          56 FPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~   75 (196)
                      |-|..|++.|.+...+..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            56777888888888877777

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.86  E-value=0.0039  Score=29.00  Aligned_cols=18  Identities=39%  Similarity=0.711  Sum_probs=7.5

Q ss_pred             ccccccccCCchHHHhhh
Q psy4683         115 CKICQLGFLSKNELNVHN  132 (196)
Q Consensus       115 C~~C~~~f~~~~~l~~H~  132 (196)
                      |..|++.|.+...+..|+
T Consensus         4 C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    4 CDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             BTTTTBBBSSHHHHHCCT
T ss_pred             cccCCCCcCCHHHHHHHH
Confidence            444444444444444443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=95.80  E-value=0.0034  Score=55.24  Aligned_cols=104  Identities=14%  Similarity=0.224  Sum_probs=71.8

Q ss_pred             ccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhh
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQ  135 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  135 (196)
                      -.|..|+..+.....+..|+...+...+-|.|+.|++.|.....|..||+..+.+-.-  .+|-.. ...-.+.+-...-
T Consensus       437 ~e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~g-q~~~~~arg~~~~  513 (1406)
T KOG1146|consen  437 VELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKAG-QNHPRLARGEVYR  513 (1406)
T ss_pred             ccccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch--hHhHhc-ccccccccccccc
Confidence            3466777788888888887766677778999999999999999999999974432111  222211 1111111111223


Q ss_pred             cCCCCccCcccccccCCchhHHHHHHH
Q psy4683         136 HCAQPHTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       136 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      .+.++|.|..|...+....+|.+|+..
T Consensus       514 ~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  514 CPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CCCCcccceeeeeeeecchHHHHHHHH
Confidence            345789999999999999999999876

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.78  E-value=0.0075  Score=27.51  Aligned_cols=20  Identities=40%  Similarity=0.924  Sum_probs=12.2

Q ss_pred             cCcccccccCCchhHHHHHHH
Q psy4683         142 TCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       142 ~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      .|+.||+.| ....|.+|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            566666666 55566666543

>KOG2231|consensus

Probab=95.68  E-value=0.013  Score=48.60  Aligned_cols=103  Identities=19%  Similarity=0.361  Sum_probs=70.4

Q ss_pred             ccCCCCcccc---------------cCchHHHHHHHhhcCCCcccccccc---------cccCCchHHHhhhhhhcC-CC
Q psy4683          85 FSCDLCSYTS---------------TQKYYLVKHKSRHIKDYNVFCKICQ---------LGFLSKNELNVHNIKQHC-AQ  139 (196)
Q Consensus        85 ~~C~~C~~~f---------------~~~~~l~~H~~~h~~~~~~~C~~C~---------~~f~~~~~l~~H~~~~~~-~~  139 (196)
                      +.|.+|++.|               .....|..|++.-+  +.+.|..|-         ....+...|..|+...-. ++
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H--~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~  177 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQH--KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDE  177 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhh--hhhccccccccceeeeeeeehehHHHHHHHHhcCCCccc
Confidence            4576676666               36678889986433  233444432         222345677777765433 22


Q ss_pred             ----CccCcccccccCCchhHHHHHHHhhccCCccccC------ceeccCCchhhhhhhHhh
Q psy4683         140 ----PHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD------TYFYEGNSLAWEDTSLEI  191 (196)
Q Consensus       140 ----~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~------~~f~~~~~l~~H~~~~h~  191 (196)
                          --.|..|...|-....|++|++.++.  -..-|+      ..|....+|..|.+..|.
T Consensus       178 s~rGhp~C~~C~~~fld~~el~rH~~~~h~--~chfC~~~~~~neyy~~~~dLe~HfR~~Hf  237 (669)
T KOG2231|consen  178 SCRGHPLCKFCHERFLDDDELYRHLRFDHE--FCHFCDYKTGQNEYYNDYDDLEEHFRKGHF  237 (669)
T ss_pred             cccCCccchhhhhhhccHHHHHHhhcccee--heeecCcccccchhcccchHHHHHhhhcCc
Confidence                24699999999999999999998775  333442      788899999999998884

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.23  E-value=0.01  Score=44.90  Aligned_cols=102  Identities=23%  Similarity=0.361  Sum_probs=73.3

Q ss_pred             ccCCC--CcccccCchHHHHHHHhhcCCCcccccccc---ccc------CCchHHHhhhhhhcCCCCc----cCcccccc
Q psy4683          85 FSCDL--CSYTSTQKYYLVKHKSRHIKDYNVFCKICQ---LGF------LSKNELNVHNIKQHCAQPH----TCSVCKKI  149 (196)
Q Consensus        85 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f------~~~~~l~~H~~~~~~~~~~----~C~~C~~~  149 (196)
                      |.|+.  |.........|..|.+..++.  +.|.+|-   +.|      .+...|..|......+..|    .|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            78875  666655667888898765532  3465552   233      3456677776554443233    59999999


Q ss_pred             cCCchhHHHHHHHhhccCCccccC-------ceeccCCchhhhhhhHh
Q psy4683         150 FVNKKNLTTHKKIHLALDRNYQCD-------TYFYEGNSLAWEDTSLE  190 (196)
Q Consensus       150 f~~~~~l~~H~~~h~~~~~~~~C~-------~~f~~~~~l~~H~~~~h  190 (196)
                      |-....|.+|++.-+  ++.|.|+       ..|....+|..|.+.-|
T Consensus       230 FYdDDEL~~HcR~~H--E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         230 FYDDDELRRHCRLRH--EACHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             ecChHHHHHHHHhhh--hhhhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            999999999999977  4899999       67888899999987654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.73  E-value=0.032  Score=27.51  Aligned_cols=21  Identities=29%  Similarity=0.627  Sum_probs=14.1

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      +|.|+.|+..|.+...+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            456777777777666666666

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=94.69  E-value=0.014  Score=51.63  Aligned_cols=94  Identities=11%  Similarity=0.160  Sum_probs=61.3

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhh
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIK  134 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  134 (196)
                      -+.|..|++.|.....+. |+-    ...+|.|..|...|.....|..|.+.           |-+.+.......-+.-.
T Consensus      1260 e~~c~~~~~~~~~~~~~~-~l~----~~~~~~~~~~~~~~~~~~~l~~~~~k-----------~~~~~~~~~~~~~~~l~ 1323 (1406)
T KOG1146|consen 1260 EGECGAVDELLTPSFGIS-TLD----VTHRYLCRQCKMAFDGEAPLTAHQRK-----------FCFAGRGSGGSMPPPLR 1323 (1406)
T ss_pred             cchhhhccccccCcccee-ecc----cchhHHHHHHHhhhcchhHHHHHHHH-----------HHhccCccccCCCCccc
Confidence            367888888877666665 542    23467788888888777777777621           11233333333344444


Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +...++| |..|...|+....|..|+++-++
T Consensus      1324 ~~d~~~~-c~~c~~~~~~~~alqihm~~~~~ 1353 (1406)
T KOG1146|consen 1324 VPDCTYH-CLACEVLLSGREALQIHMRSSAH 1353 (1406)
T ss_pred             Ccccccc-chHHHhhcchhHHHHHHHHHhhh
Confidence            4445566 99999999999999999988544

>KOG2893|consensus

Probab=94.62  E-value=0.009  Score=42.88  Aligned_cols=45  Identities=24%  Similarity=0.431  Sum_probs=36.1

Q ss_pred             ccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHH
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKS  105 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  105 (196)
                      -.|-.|++.|.+..-|..|++..     -|+|.+|-+.+.+--.|..|..
T Consensus        11 pwcwycnrefddekiliqhqkak-----hfkchichkkl~sgpglsihcm   55 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKAK-----HFKCHICHKKLFSGPGLSIHCM   55 (341)
T ss_pred             ceeeecccccchhhhhhhhhhhc-----cceeeeehhhhccCCCceeehh
Confidence            36999999999999999998544     4899999988776666666643

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.58  E-value=0.02  Score=28.03  Aligned_cols=10  Identities=40%  Similarity=1.062  Sum_probs=5.8

Q ss_pred             CCccCccccc
Q psy4683         139 QPHTCSVCKK  148 (196)
Q Consensus       139 ~~~~C~~C~~  148 (196)
                      .++.||.|+.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4556666653

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893|consensus

Probab=94.48  E-value=0.013  Score=42.06  Aligned_cols=41  Identities=24%  Similarity=0.519  Sum_probs=21.3

Q ss_pred             ccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHH
Q psy4683         115 CKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTH  159 (196)
Q Consensus       115 C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  159 (196)
                      |=.|++.|.+...|..|++..    -|+|.+|.+..-+...|..|
T Consensus        13 cwycnrefddekiliqhqkak----hfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhhc----cceeeeehhhhccCCCceee
Confidence            444555555555555554432    25555555555555555554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.25  E-value=0.026  Score=27.83  Aligned_cols=23  Identities=22%  Similarity=0.492  Sum_probs=18.6

Q ss_pred             CccCcccccccCCchhHHHHHHH
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      +|.|..|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2785|consensus

Probab=93.97  E-value=0.21  Score=38.62  Aligned_cols=22  Identities=14%  Similarity=0.288  Sum_probs=15.3

Q ss_pred             CccCCCCcccccCchHHHHHHH
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKS  105 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~  105 (196)
                      ++.|..|.+.|........|+.
T Consensus        68 ~~~c~~c~k~~~s~~a~~~hl~   89 (390)
T KOG2785|consen   68 VVYCEACNKSFASPKAHENHLK   89 (390)
T ss_pred             ceehHHhhccccChhhHHHHHH
Confidence            4677777777777766666664

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.74  E-value=0.036  Score=30.20  Aligned_cols=31  Identities=19%  Similarity=0.432  Sum_probs=23.9

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcC
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHA   80 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~   80 (196)
                      -.++..+.|+-||..|..+.++.+|....|.
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3455668888888888888888888876663

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.66  E-value=0.035  Score=30.23  Aligned_cols=30  Identities=17%  Similarity=0.330  Sum_probs=24.8

Q ss_pred             cCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         136 HCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       136 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      -|+.-+.||.|+..|.......+|....++
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            356678899999999999999999887765

>KOG4173|consensus

Probab=93.62  E-value=0.037  Score=38.91  Aligned_cols=26  Identities=19%  Similarity=0.340  Sum_probs=16.0

Q ss_pred             CCCCccCcc--cccccCCchhHHHHHHH
Q psy4683         137 CAQPHTCSV--CKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       137 ~~~~~~C~~--C~~~f~~~~~l~~H~~~  162 (196)
                      |...|.|-+  |+..|.+...-..|+-.
T Consensus       141 G~dMy~ClvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  141 GQDMYQCLVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             CccHHHHHHHhhhhhhhhhhhhhhHHHH
Confidence            345566643  77777776666666544

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.07  E-value=0.022  Score=45.12  Aligned_cols=59  Identities=22%  Similarity=0.455  Sum_probs=31.9

Q ss_pred             cccccccccccCCchHHHhhhh--hhcCC--CCccCc--ccccccCCchhHHHHHHHhhccCCccc
Q psy4683         112 NVFCKICQLGFLSKNELNVHNI--KQHCA--QPHTCS--VCKKIFVNKKNLTTHKKIHLALDRNYQ  171 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~  171 (196)
                      ++.|..|...|.....+..|.+  .|.++  .++.|+  .|++.|.....+..|..+|.+ ..++.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  353 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS-ISPAK  353 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccC-CCccc
Confidence            3445555555555555555555  45555  555555  455555555555555555555 44333

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.64  E-value=0.19  Score=32.10  Aligned_cols=26  Identities=23%  Similarity=0.342  Sum_probs=23.0

Q ss_pred             CccC----cccccccCCchhHHHHHHHhhc
Q psy4683         140 PHTC----SVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       140 ~~~C----~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.|    ..|++.+.+...+.+|++.+||
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3889    9999999999999999998775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2785|consensus

Probab=92.27  E-value=0.23  Score=38.47  Aligned_cols=30  Identities=23%  Similarity=0.367  Sum_probs=24.6

Q ss_pred             CCCcccccccccccCCHHHHHHHHHhhcCC
Q psy4683          52 SDTKFPCRLCSQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        52 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~   81 (196)
                      ...|-.|-.|++.+.+...-..||...|.-
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~Hgf  192 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGF  192 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCC
Confidence            334678999999999999999999766653

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.15  E-value=0.25  Score=31.52  Aligned_cols=24  Identities=29%  Similarity=0.721  Sum_probs=14.7

Q ss_pred             CccCcccccccCCchhHHHHHHHh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      .|.|+.|...|=..=....|...|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhcc
Confidence            466666666666655555555554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=92.08  E-value=0.084  Score=33.61  Aligned_cols=13  Identities=31%  Similarity=0.710  Sum_probs=6.2

Q ss_pred             CccCcccccccCC
Q psy4683         140 PHTCSVCKKIFVN  152 (196)
Q Consensus       140 ~~~C~~C~~~f~~  152 (196)
                      |..||.||..|.-
T Consensus        26 PivCP~CG~~~~~   38 (108)
T PF09538_consen   26 PIVCPKCGTEFPP   38 (108)
T ss_pred             CccCCCCCCccCc
Confidence            4445555544443

The function of members of this family is unknown.

>KOG2186|consensus

Probab=90.91  E-value=0.12  Score=37.69  Aligned_cols=47  Identities=28%  Similarity=0.506  Sum_probs=27.0

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKS  105 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  105 (196)
                      .|.|..||.... ...+.+|+-+ ..+ .-|.|-.|++.|.. .....|..
T Consensus         3 ~FtCnvCgEsvK-Kp~vekH~sr-Crn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVK-KPQVEKHMSR-CRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhcc-ccchHHHHHh-ccC-CeeEEeeccccccc-chhhhhhh
Confidence            366777777664 3455557633 323 45677777777765 44455544

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.80  E-value=0.053  Score=39.15  Aligned_cols=13  Identities=15%  Similarity=0.424  Sum_probs=10.6

Q ss_pred             ccCcccccccCCc
Q psy4683         141 HTCSVCKKIFVNK  153 (196)
Q Consensus       141 ~~C~~C~~~f~~~  153 (196)
                      ..||.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5799999987754

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.98  E-value=0.52  Score=30.10  Aligned_cols=84  Identities=15%  Similarity=0.247  Sum_probs=57.4

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcCC-CCCc------------cCCCCcccccCchHHHHHHHhhcCCCccccccccc
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHAT-QGLF------------SCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQL  120 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~------------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  120 (196)
                      -|..|+.||-+.-....|.+..  +|.- .++|            .|--|...|........  ..-.....|.|..|..
T Consensus        14 LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~   89 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKN   89 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCC
Confidence            4678999999999998888875  2321 1222            38889988875431110  0022234689999999


Q ss_pred             ccCCchHHHhhhhhhcCCCCccCcccc
Q psy4683         121 GFLSKNELNVHNIKQHCAQPHTCSVCK  147 (196)
Q Consensus       121 ~f~~~~~l~~H~~~~~~~~~~~C~~C~  147 (196)
                      .|-..-.+..|...|.      |+.|.
T Consensus        90 ~FC~dCD~fiHe~Lh~------CPGC~  110 (112)
T TIGR00622        90 VFCVDCDVFVHESLHC------CPGCI  110 (112)
T ss_pred             ccccccchhhhhhccC------CcCCC
Confidence            9998888888877664      77775

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2186|consensus

Probab=89.79  E-value=0.2  Score=36.56  Aligned_cols=54  Identities=24%  Similarity=0.314  Sum_probs=38.4

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCc
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPH  141 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  141 (196)
                      |.|..||.....+ .+.+|+...++ ..|.|..|+.+|-. -....|..--+..+.|
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCITEaQKY   57 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCITEAQKY   57 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcchHHHh
Confidence            6788898877644 56668887776 67889999998887 5566776555544434

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.74  E-value=0.66  Score=29.57  Aligned_cols=82  Identities=21%  Similarity=0.165  Sum_probs=44.5

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHH-HHHhhc------------CCCcccc----cc
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVK-HKSRHI------------KDYNVFC----KI  117 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~-H~~~h~------------~~~~~~C----~~  117 (196)
                      -..|..|+.+... +.+..|++..|...+...-..-...+.....|.. ......            .-..|.|    ..
T Consensus        11 vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~~   89 (109)
T PF12013_consen   11 VLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPPH   89 (109)
T ss_pred             EEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCCC
Confidence            3679999988865 8899999655533211100000000000000000 000000            0123789    88


Q ss_pred             cccccCCchHHHhhhhhhcC
Q psy4683         118 CQLGFLSKNELNVHNIKQHC  137 (196)
Q Consensus       118 C~~~f~~~~~l~~H~~~~~~  137 (196)
                      |+....+...+..|++.+||
T Consensus        90 C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   90 CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCcEeccHHHHHHHHHHhcC
Confidence            99999999999999988775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4173|consensus

Probab=89.57  E-value=0.14  Score=36.08  Aligned_cols=78  Identities=21%  Similarity=0.281  Sum_probs=55.6

Q ss_pred             Ccccccc--cccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhh---------ccCCccccC-----c
Q psy4683         111 YNVFCKI--CQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHL---------ALDRNYQCD-----T  174 (196)
Q Consensus       111 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~---------~~~~~~~C~-----~  174 (196)
                      ..|.|++  |-..|.+......|-..-++.   .|..|.+.|.+...|-.|+.--|         .+..-|.|-     .
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            3466776  667777776666665444443   68889999998888888865433         124457766     8


Q ss_pred             eeccCCchhhhhhhHhh
Q psy4683         175 YFYEGNSLAWEDTSLEI  191 (196)
Q Consensus       175 ~f~~~~~l~~H~~~~h~  191 (196)
                      .|.+.-.-..|+...|+
T Consensus       155 KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhHHHHhcc
Confidence            89999999999988775

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.33  E-value=0.2  Score=24.66  Aligned_cols=8  Identities=38%  Similarity=1.394  Sum_probs=4.2

Q ss_pred             CccCcccc
Q psy4683         140 PHTCSVCK  147 (196)
Q Consensus       140 ~~~C~~C~  147 (196)
                      |..||.|+
T Consensus        18 p~~CP~Cg   25 (34)
T cd00729          18 PEKCPICG   25 (34)
T ss_pred             CCcCcCCC
Confidence            34555555

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PHA00626 hypothetical protein

Probab=88.92  E-value=0.14  Score=28.00  Aligned_cols=17  Identities=12%  Similarity=0.172  Sum_probs=11.4

Q ss_pred             CCCccCcccccccCCch
Q psy4683         138 AQPHTCSVCKKIFVNKK  154 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~  154 (196)
                      .+.|.|+.||+.|+..+
T Consensus        21 snrYkCkdCGY~ft~~~   37 (59)
T PHA00626         21 SDDYVCCDCGYNDSKDA   37 (59)
T ss_pred             CcceEcCCCCCeechhh
Confidence            35677888877776543

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=88.84  E-value=0.37  Score=33.03  Aligned_cols=33  Identities=15%  Similarity=0.395  Sum_probs=18.4

Q ss_pred             CCCcccccccccccCCchHHHhhhhhhcCCCCccCccccccc
Q psy4683         109 KDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIF  150 (196)
Q Consensus       109 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f  150 (196)
                      ....|.|+.|+..|+...++.         ..|.||.||...
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            344566666666665555543         146666666543

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=88.32  E-value=0.3  Score=24.54  Aligned_cols=32  Identities=22%  Similarity=0.513  Sum_probs=14.1

Q ss_pred             cccccccccCCchHHHhhhhhhcCCCCccCccccccc
Q psy4683         114 FCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIF  150 (196)
Q Consensus       114 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f  150 (196)
                      .|+.|+..|.....-     ...+....+|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~~-----l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDK-----LPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHHH-----cccCCcEEECCCCCcEe
Confidence            455555555544321     11222344555555544

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.14  E-value=0.42  Score=30.49  Aligned_cols=30  Identities=17%  Similarity=0.413  Sum_probs=17.0

Q ss_pred             ccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCc
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQK   97 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~   97 (196)
                      ..|..||+.|...            +..|..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL------------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL------------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC------------CCCCccCCCCCCccCcc
Confidence            4566677666422            22456677777666443

The function of members of this family is unknown.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=87.61  E-value=0.33  Score=25.63  Aligned_cols=10  Identities=30%  Similarity=1.009  Sum_probs=5.7

Q ss_pred             cccccccccc
Q psy4683          56 FPCRLCSQEF   65 (196)
Q Consensus        56 ~~C~~C~~~f   65 (196)
                      |.|..||..|
T Consensus         4 y~C~~CG~~~   13 (46)
T PRK00398          4 YKCARCGREV   13 (46)
T ss_pred             EECCCCCCEE
Confidence            5555565555

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=87.43  E-value=0.4  Score=26.68  Aligned_cols=10  Identities=40%  Similarity=0.863  Sum_probs=6.3

Q ss_pred             CCccCccccc
Q psy4683         139 QPHTCSVCKK  148 (196)
Q Consensus       139 ~~~~C~~C~~  148 (196)
                      .+|.|+.||+
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4566666664

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=86.73  E-value=0.53  Score=26.17  Aligned_cols=9  Identities=44%  Similarity=1.254  Sum_probs=4.3

Q ss_pred             ccccccccc
Q psy4683          56 FPCRLCSQE   64 (196)
Q Consensus        56 ~~C~~C~~~   64 (196)
                      |.|+.||..
T Consensus        28 F~CPnCGe~   36 (61)
T COG2888          28 FPCPNCGEV   36 (61)
T ss_pred             eeCCCCCce
Confidence            445555543

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=86.19  E-value=0.56  Score=23.36  Aligned_cols=10  Identities=20%  Similarity=0.557  Sum_probs=4.8

Q ss_pred             ccCCCCcccc
Q psy4683          85 FSCDLCSYTS   94 (196)
Q Consensus        85 ~~C~~C~~~f   94 (196)
                      .+|+.|+..|
T Consensus        26 v~C~~C~~~f   35 (36)
T PF13717_consen   26 VRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEe
Confidence            4455555443

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=86.12  E-value=0.44  Score=23.92  Aligned_cols=9  Identities=33%  Similarity=0.970  Sum_probs=4.3

Q ss_pred             ccccccccc
Q psy4683          57 PCRLCSQEF   65 (196)
Q Consensus        57 ~C~~C~~~f   65 (196)
                      .|+.|+..|
T Consensus         4 ~CP~C~~~~   12 (38)
T TIGR02098         4 QCPNCKTSF   12 (38)
T ss_pred             ECCCCCCEE
Confidence            344455444

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=85.38  E-value=0.52  Score=30.70  Aligned_cols=15  Identities=7%  Similarity=-0.057  Sum_probs=7.7

Q ss_pred             CcccccccccccCCc
Q psy4683         111 YNVFCKICQLGFLSK  125 (196)
Q Consensus       111 ~~~~C~~C~~~f~~~  125 (196)
                      .|..|+.||..|...
T Consensus        25 ~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        25 RPAVSPYTGEQFPPE   39 (129)
T ss_pred             CCccCCCcCCccCcc
Confidence            345555555555443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=85.30  E-value=0.64  Score=32.56  Aligned_cols=34  Identities=18%  Similarity=0.574  Sum_probs=19.4

Q ss_pred             CCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCC
Q psy4683         110 DYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVN  152 (196)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~  152 (196)
                      ...|.|+.|+..|....++.         ..|.||.||.....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCee
Confidence            34566766666666555442         24677777655433

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=84.89  E-value=0.54  Score=24.64  Aligned_cols=11  Identities=18%  Similarity=0.280  Sum_probs=4.9

Q ss_pred             ccccccccccC
Q psy4683         113 VFCKICQLGFL  123 (196)
Q Consensus       113 ~~C~~C~~~f~  123 (196)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            34444444433

present in RNA polymerase I, II and III

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=84.41  E-value=0.31  Score=26.45  Aligned_cols=11  Identities=18%  Similarity=0.661  Sum_probs=5.0

Q ss_pred             ccCCCCccccc
Q psy4683          85 FSCDLCSYTST   95 (196)
Q Consensus        85 ~~C~~C~~~f~   95 (196)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (52)
T TIGR02605         6 YRCTACGHRFE   16 (52)
T ss_pred             EEeCCCCCEeE
Confidence            44444444443

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=83.94  E-value=1.1  Score=30.69  Aligned_cols=33  Identities=18%  Similarity=0.229  Sum_probs=23.5

Q ss_pred             CCCCccCCCCcccccCchHHHHHHHhhcCCCccccccccccc
Q psy4683          81 TQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGF  122 (196)
Q Consensus        81 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  122 (196)
                      +..-|.|+.|+..|.....+.         ..|.|+.||...
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            345588888888887666653         368888888754

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=83.32  E-value=1.2  Score=23.23  Aligned_cols=24  Identities=25%  Similarity=0.549  Sum_probs=14.0

Q ss_pred             CcccccccccccCCH----HHHHHHHHh
Q psy4683          54 TKFPCRLCSQEFDTK----EQRKKHERK   77 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~----~~l~~H~~~   77 (196)
                      ....|..|++.+...    ++|.+|++.
T Consensus        15 ~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   15 KKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             S-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             CeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            456788888888654    677777744

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=83.05  E-value=0.35  Score=24.65  Aligned_cols=11  Identities=27%  Similarity=0.495  Sum_probs=5.2

Q ss_pred             ccccccccccC
Q psy4683         113 VFCKICQLGFL  123 (196)
Q Consensus       113 ~~C~~C~~~f~  123 (196)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (41)
T smart00834        6 YRCEDCGHTFE   16 (41)
T ss_pred             EEcCCCCCEEE
Confidence            34555555443

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=82.89  E-value=0.57  Score=32.82  Aligned_cols=32  Identities=22%  Similarity=0.335  Sum_probs=21.1

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccC
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFL  123 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  123 (196)
                      .-|.|+.|+..|.....+.         ..|.|+.||....
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            4477888887776555432         3678888876543

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.47  E-value=0.24  Score=35.76  Aligned_cols=19  Identities=42%  Similarity=0.903  Sum_probs=13.0

Q ss_pred             CcccccccccccCCHHHHH
Q psy4683          54 TKFPCRLCSQEFDTKEQRK   72 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~   72 (196)
                      +.+.|+.|++.|....-..
T Consensus         4 k~~~CPvC~~~F~~~~vrs   22 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRS   22 (214)
T ss_pred             CceECCCCCCeeeeeEEEc
Confidence            3567888888887664433

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=82.24  E-value=0.79  Score=31.60  Aligned_cols=23  Identities=22%  Similarity=0.728  Sum_probs=14.9

Q ss_pred             cccccccccccCCchHHHhhhhhhcCCCCccCcccc
Q psy4683         112 NVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCK  147 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~  147 (196)
                      -|.|++||..+             -++.|..||+||
T Consensus       134 ~~vC~vCGy~~-------------~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYTH-------------EGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCcc-------------cCCCCCcCCCCC
Confidence            57777776542             235677777777

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=81.95  E-value=0.53  Score=24.34  Aligned_cols=11  Identities=36%  Similarity=1.201  Sum_probs=7.0

Q ss_pred             ccccccccccC
Q psy4683          56 FPCRLCSQEFD   66 (196)
Q Consensus        56 ~~C~~C~~~f~   66 (196)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (42)
T PF09723_consen    6 YRCEECGHEFE   16 (42)
T ss_pred             EEeCCCCCEEE
Confidence            56666666663

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>smart00614 ZnF_BED BED zinc finger

Probab=81.69  E-value=0.97  Score=24.30  Aligned_cols=22  Identities=27%  Similarity=0.545  Sum_probs=15.2

Q ss_pred             CccCcccccccCCc-----hhHHHHHH
Q psy4683         140 PHTCSVCKKIFVNK-----KNLTTHKK  161 (196)
Q Consensus       140 ~~~C~~C~~~f~~~-----~~l~~H~~  161 (196)
                      .-.|..|++.++..     +.|.+|+.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            34677787777655     47777777

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>smart00531 TFIIE Transcription initiation factor IIE

Probab=81.31  E-value=1.3  Score=29.89  Aligned_cols=36  Identities=17%  Similarity=0.233  Sum_probs=20.2

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhcCCCccccccccccc
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGF  122 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  122 (196)
                      .-|.|+.|+..|.....+..   ... ...|.|+.||...
T Consensus        98 ~~Y~Cp~C~~~y~~~ea~~~---~d~-~~~f~Cp~Cg~~l  133 (147)
T smart00531       98 AYYKCPNCQSKYTFLEANQL---LDM-DGTFTCPRCGEEL  133 (147)
T ss_pred             cEEECcCCCCEeeHHHHHHh---cCC-CCcEECCCCCCEE
Confidence            45778888877764332211   011 2337788887654

>smart00531 TFIIE Transcription initiation factor IIE

Probab=80.69  E-value=1.6  Score=29.50  Aligned_cols=39  Identities=15%  Similarity=0.268  Sum_probs=26.8

Q ss_pred             CCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccC
Q psy4683         109 KDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFV  151 (196)
Q Consensus       109 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~  151 (196)
                      ....|.|+.|+..|....++..-   .. ...|.||.||....
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~~---d~-~~~f~Cp~Cg~~l~  134 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQLL---DM-DGTFTCPRCGEELE  134 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHhc---CC-CCcEECCCCCCEEE
Confidence            45578999999999876554331   11 33499999997754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD 110
           T +  + C  C + F  K+   +H+R  H  +  + C  C  + +Q+  L  H+  H  +
Sbjct: 45  TGEKPYKCPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103
Query: 111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY 170
               C  C   F     L  H       +P+ C  C K F  + NL TH++ H   ++ Y
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG-EKPY 162
Query: 171 QCD 173
           +C 
Sbjct: 163 KCP 165

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHI-- 108
           +  +   C  C ++F +K   K H RK H  +  F C  C     +K  L++H++R+   
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 109 KDYNVF-CKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTH 159
           +   VF C +CQ  F  + EL +H +      P+ CS C + F+ KK+L +H
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 81  TQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQP 140
           T+  F C  C    T+ Y L+ H+  H  +    C IC   F  ++ L  H       +P
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 141 HTCSVCKKIFVNKKNLTTHKKIHL 164
             C  C K F   + L  HK +H+
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLHM 97

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	6e-04

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKD-HATQGLFSCDLC---SYTSTQKYYLVKHKSR 106
           T  +KF C+ CS  +DT  +   H  +  H        D      ++  +K  L++ + +
Sbjct: 15  TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK 74

Query: 107 HIKDYNVFCKICQLGFLSKNELNVHNIKQH 136
                 + C  C   F S  +L+VH IK  
Sbjct: 75  EDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 5/53 (9%)

Query: 115 CKICQLGFLSKNELNVHNIKQHCAQ----PHTCSVCKKIFVNKKNLTTHKKIH 163
           C+IC      K  LN H  ++H          C  C K F    ++  H+   
Sbjct: 10  CEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 85  FSCDLCSYTSTQKYYLVKHKSRHIKDYNVF---CKICQLGFLSKNELNVHNIKQHCA-QP 140
             C++C +T  QK  L  H+ +H +        C+ C   F   + +  H  K H A   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 141 HTCSVCKKIF 150
                     
Sbjct: 68  APQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 56  FPCRLCSQEFDTKEQRKKHERKDHATQGL--FSCDLCSYTSTQKYYLVKHKSRH 107
             C +C      K     H+RK   T     F C+ C     +   +  H+S+ 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 7/36 (19%), Positives = 13/36 (36%), Gaps = 2/36 (5%)

Query: 140 PHTCSVCKKIFVNKKNLTTHKKIH--LALDRNYQCD 173
              C +C      K +L  H++ H        + C+
Sbjct: 7   GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCE 42

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 22/87 (25%), Positives = 30/87 (34%), Gaps = 13/87 (14%)

Query: 85  FSCDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHT 142
             C  C      KYYL  H  +H   K +   C  C   +  K  L  H   +     + 
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFE--CPKCGKCYFRKENLLEH---EARNCMNR 62

Query: 143 ------CSVCKKIFVNKKNLTTHKKIH 163
                 CSVC++ F  +  L  H   H
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSH 89

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.5 bits (91), Expect = 7e-05
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 50  VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIK 109
           V +   + CRLC+ +  +  ++  HER          C  CS          +H+S+  +
Sbjct: 11  VENKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEHESKC-E 66

Query: 110 DYNVFCKICQLGFLSKNELNVHNIKQH 136
              + C  C   F S   +  H ++ H
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVEVH 93

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 26/115 (22%), Positives = 37/115 (32%), Gaps = 14/115 (12%)

Query: 61  CSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRH---------IKDY 111
                   +Q    +      Q       C  T +  + LV H +              Y
Sbjct: 3   SGSSGQPIKQELSCKWI-DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 112 NVFCKICQLGFLSKNELNVHNIKQHCAQ-PHTCSV--CKKIFVNKKNLTTHKKIH 163
              C      F +K +L  H I+ H  + P  C    C KIF   +NL  HK+ H
Sbjct: 62  WEECPREGKSFKAKYKLVNH-IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 28/138 (20%), Positives = 44/138 (31%), Gaps = 19/138 (13%)

Query: 51  TSDTKFPCRLCSQEFDTKEQRKKHERKDH--------ATQGLFSCDLCSYTSTQKYYLVK 102
            +    P + C + F T  +   H   +H               C     +   KY LV 
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 103 HKSRHI--KDYNVFCKICQLG--FLSKNELNVHNIKQHCAQ-PHTCSV--CKKIFVNKKN 155
           H   H   K +   C     G  F     L +H  + H  + P  C    C + F N  +
Sbjct: 81  HIRVHTGEKPFP--CPFPGCGKIFARSENLKIH-KRTHTGEKPFKCEFEGCDRRFANSSD 137

Query: 156 LTTHKKIHLALDRNYQCD 173
              H  +H + D++    
Sbjct: 138 RKKHMHVHTS-DKSGPSS 154

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 37.0 bits (87), Expect = 4e-04
 Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 87  CDLCSYTSTQKYYLVKHKSRHI--KDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCS 144
           C++C    ++K  L  H   H   K Y   CK C       + LN H       +P  C 
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYK--CKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 145 VCKKIFVNKKNLTTHKKIH 163
           +C     N   LT H + H
Sbjct: 69  ICPYASRNSSQLTVHLRSH 87

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 5/53 (9%)

Query: 115 CKICQLGFLSKNELNVHNIKQH---CAQPHTCSVCKKIFVNKKNLTTH-KKIH 163
           C IC   F     + +H I Q          C  C  +   K +L  H +K H
Sbjct: 18  CYICHARFTQSGTMKMH-ILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 37.1 bits (85), Expect = 6e-04
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 74  HERKDHATQGLFSCDLCSYTSTQKYYLVKH-KSRH---IKDYNVFCKICQLGFLSKNELN 129
           H +++   +G + C  C++ +        H  S H   + + +  C  C       + L+
Sbjct: 8   HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67

Query: 130 VHNIKQH 136
            HN+K H
Sbjct: 68  EHNLKYH 74

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.95
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.94
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.88
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.87
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.86
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.86
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.86
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.86
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.85
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.85
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.84
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.83
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.83
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.81
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.81
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.8
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.78
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.77
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.77
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.76
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.75
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.74
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.72
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.71
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.71
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.7
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.69
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.68
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.68
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.68
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.65
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.65
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.65
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.64
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.63
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.63
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.61
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.61
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.59
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.58
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.57
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.55
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.53
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.53
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.52
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.51
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.5
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.5
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.49
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.48
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.47
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.46
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.45
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.42
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.37
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.34
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.34
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.3
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.29
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.29
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.28
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.28
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.28
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.28
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.27
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.27
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.26
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.25
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.25
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.22
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.2
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.2
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.18
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.17
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.1
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.02
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.02
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.0
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.0
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.97
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.94
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.92
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.89
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.86
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.85
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.85
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.79
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.73
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.72
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.71
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.68
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.68
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.6
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.59
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.57
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.55
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.55
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.53
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.53
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.53
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.51
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.51
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.5
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.48
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.47
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.47
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.46
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.81
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.43
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.78
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.4
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.4
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.37
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.36
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.35
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.69
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.34
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.34
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.33
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.32
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.31
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.3
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.28
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.27
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.24
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.22
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.53
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.21
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.48
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.16
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.13
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.34
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.87
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.86
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.7
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.03
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.92
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.84
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.49
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.46
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.32
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.69
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.86
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.53
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.26
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.81
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.76
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	91.32
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	90.19
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	89.89
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	89.33
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	87.93
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	87.76
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.36
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.62
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	85.25
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	84.37
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	82.77
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	81.78
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	81.65
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	81.26
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	81.16

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.2e-36  Score=214.58  Aligned_cols=169  Identities=22%  Similarity=0.447  Sum_probs=140.8

Q ss_pred             hccccccccchhhhhcCCCCcccccCCCCCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccC
Q psy4683          17 KEGLWSFLEDENEKRNFSSEEDEESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQ   96 (196)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~   96 (196)
                      ..+..++.|+.|+.. +.    ....+..|...+.++++|.|..|++.|.+...|..|+ ..|.++++|.|+.|++.|..
T Consensus        16 ~~~~~~~~C~~C~~~-f~----~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~   89 (190)
T 2i13_A           16 EPGEKPYACPECGKS-FS----RSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFSQ   89 (190)
T ss_dssp             ----------------CC----SSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESC
T ss_pred             cCCCCCCcCCCCccc-cC----CHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccCC
Confidence            456778999999987 44    4566777888888899999999999999999999999 67889999999999999999


Q ss_pred             chHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC---
Q psy4683          97 KYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD---  173 (196)
Q Consensus        97 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~---  173 (196)
                      ...|..|++.|.++++|.|..|++.|.....|..|++.|++++||.|+.|++.|.+...|..|+++|++ +++|+|+   
T Consensus        90 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~~~~C~~C~  168 (190)
T 2i13_A           90 RANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG-EKPYKCPECG  168 (190)
T ss_dssp             HHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTC
T ss_pred             HHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC-CCCeECCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999 9999988   


Q ss_pred             ceeccCCchhhhhhhHhhh
Q psy4683         174 TYFYEGNSLAWEDTSLEIT  192 (196)
Q Consensus       174 ~~f~~~~~l~~H~~~~h~~  192 (196)
                      +.|...+.|..|+++|+++
T Consensus       169 ~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          169 KSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             CEESSHHHHHHHHTTC---
T ss_pred             CccCCHHHHHHHHHhcCCC
Confidence            9999999999999998864

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.8e-33  Score=198.42  Aligned_cols=151  Identities=19%  Similarity=0.449  Sum_probs=119.2

Q ss_pred             ccCCCCCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccc
Q psy4683          40 ESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQ  119 (196)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  119 (196)
                      ...+..+...+.++++|.|+.|++.|.....|..|+ ..|.+.++|.|+.|++.|.....|..|++.|.++++|.|..|+
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   84 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECG   84 (190)
T ss_dssp             -------------------------CCSSHHHHHGG-GCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHH-HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccC
Confidence            345566777788889999999999999999999999 7798999999999999999999999999999999999999999


Q ss_pred             cccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC---ceeccCCchhhhhhhHhhh
Q psy4683         120 LGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD---TYFYEGNSLAWEDTSLEIT  192 (196)
Q Consensus       120 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~---~~f~~~~~l~~H~~~~h~~  192 (196)
                      +.|.....|..|++.|+++++|.|+.|++.|.+...|..|+++|++ +++|+|+   +.|...+.|..|++.|++.
T Consensus        85 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  159 (190)
T 2i13_A           85 KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG-EKPYKCPECGKSFSREDNLHTHQRTHTGE  159 (190)
T ss_dssp             CEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999 9999988   9999999999999998753

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=2.4e-32  Score=192.58  Aligned_cols=169  Identities=21%  Similarity=0.319  Sum_probs=146.9

Q ss_pred             hcccccccc--chhhhhcCCCCcccccCCCCCCCCCCCCCcccc--cccccccCCHHHHHHHHHhhcCCCCCccCC--CC
Q psy4683          17 KEGLWSFLE--DENEKRNFSSEEDEESDKLDDEDNVTSDTKFPC--RLCSQEFDTKEQRKKHERKDHATQGLFSCD--LC   90 (196)
Q Consensus        17 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C   90 (196)
                      .....++.|  ..|+.. +.    ....+..|...+.++++|.|  ..|++.|.+...|..|+ ..|.++++|.|+  .|
T Consensus         7 ~~~~~~~~C~~~~C~~~-f~----~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C   80 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAA-YN----KNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGC   80 (190)
T ss_dssp             ---CCCCBCSSTTTCCB-CS----SHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSC
T ss_pred             cCCCcceeCCCCCCcch-hC----CHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCC
Confidence            345677888  578776 44    46677778888888999999  88999999999999999 779999999999  89


Q ss_pred             cccccCchHHHHHH-Hhh-cCCCcccc--cccccccCCchHHHhhhhhhcCCCCccCcc--cccccCCchhHHHHHHHhh
Q psy4683          91 SYTSTQKYYLVKHK-SRH-IKDYNVFC--KICQLGFLSKNELNVHNIKQHCAQPHTCSV--CKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus        91 ~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  164 (196)
                      ++.|.+...|..|+ +.| .+.++|.|  ..|++.|.....|..|+++|++++||.|+.  |++.|.+.+.|..|+++|+
T Consensus        81 ~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~  160 (190)
T 1tf6_A           81 DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA  160 (190)
T ss_dssp             CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSC
T ss_pred             CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhC
Confidence            99999999999999 566 46789999  889999999999999999999999999988  9999999999999999999


Q ss_pred             ccCCccc---cCceeccCCchhhhhhhHhhh
Q psy4683         165 ALDRNYQ---CDTYFYEGNSLAWEDTSLEIT  192 (196)
Q Consensus       165 ~~~~~~~---C~~~f~~~~~l~~H~~~~h~~  192 (196)
                      + -+...   |++.|...+.|..|+++||++
T Consensus       161 ~-~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          161 G-YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             S-CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             C-CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            8 44445   889999999999999998863

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=3e-30  Score=176.13  Aligned_cols=137  Identities=26%  Similarity=0.433  Sum_probs=126.9

Q ss_pred             CcccccccccccCCHHHHHHHHHh--hcCCCCCccCCCC-----cccccCchHHHHHHHhhcCCCcccccc--cccccCC
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERK--DHATQGLFSCDLC-----SYTSTQKYYLVKHKSRHIKDYNVFCKI--CQLGFLS  124 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~--~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  124 (196)
                      .+|.|+.|++.|.+...|..|++.  .|.+.++|.|+.|     ++.|.....|..|++.|.++++|.|..  |++.|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            478999999999999999999953  6888899998753     499999999999999999999999985  9999999


Q ss_pred             chHHHhhhhhhcCCCCccCcc--cccccCCchhHHHHH-HHhhccCCccccC-----ceeccCCchhhhhhhHhh
Q psy4683         125 KNELNVHNIKQHCAQPHTCSV--CKKIFVNKKNLTTHK-KIHLALDRNYQCD-----TYFYEGNSLAWEDTSLEI  191 (196)
Q Consensus       125 ~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~C~-----~~f~~~~~l~~H~~~~h~  191 (196)
                      ...|..|++.|+++++|.|+.  |++.|.+.+.|..|+ ++|.+ +++|+|+     +.|...+.|..|+++||+
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN-EKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS-CCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC-CCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999999999999999999998  999999999999999 78888 8999873     999999999999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.7e-29  Score=178.00  Aligned_cols=139  Identities=21%  Similarity=0.348  Sum_probs=127.7

Q ss_pred             CCCCcccc--cccccccCCHHHHHHHHHhhcCCCCCccC--CCCcccccCchHHHHHHHhhcCCCccccc--ccccccCC
Q psy4683          51 TSDTKFPC--RLCSQEFDTKEQRKKHERKDHATQGLFSC--DLCSYTSTQKYYLVKHKSRHIKDYNVFCK--ICQLGFLS  124 (196)
Q Consensus        51 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~  124 (196)
                      ...++|.|  ..|++.|.+...|..|+ ..|.++++|.|  +.|++.|.....|..|++.|.++++|.|.  .|++.|.+
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            34578999  68999999999999999 67899999999  88999999999999999999999999999  89999999


Q ss_pred             chHHHhhh-hhh-cCCCCccC--cccccccCCchhHHHHHHHhhccCCccccC-----ceeccCCchhhhhhhHhh
Q psy4683         125 KNELNVHN-IKQ-HCAQPHTC--SVCKKIFVNKKNLTTHKKIHLALDRNYQCD-----TYFYEGNSLAWEDTSLEI  191 (196)
Q Consensus       125 ~~~l~~H~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~-----~~f~~~~~l~~H~~~~h~  191 (196)
                      ...|..|+ +.| .+.++|.|  +.|++.|.+...|..|+++|++ ++||+|+     +.|...+.|..|+++|++
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            99999999 556 36789999  8899999999999999999999 9999873     999999999999998765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.95  E-value=2.4e-28  Score=166.69  Aligned_cols=122  Identities=21%  Similarity=0.394  Sum_probs=114.5

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHhhcCCCCC--------ccCCCCcccccCchHHHHHHHhhcCCCcccccc--ccc
Q psy4683          51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGL--------FSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKI--CQL  120 (196)
Q Consensus        51 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~  120 (196)
                      ....+|.|..|++.|.+...|..|++..|.+..+        |.|..|++.|.....|..|++.|.++++|.|..  |++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            3456799999999999999999999655887765        899999999999999999999999999999998  999


Q ss_pred             ccCCchHHHhhhhhhcCCCCccCcc--cccccCCchhHHHHHHHhhccCCccccC
Q psy4683         121 GFLSKNELNVHNIKQHCAQPHTCSV--CKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       121 ~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|.....|..|++.|+++++|.|..  |++.|.+...|.+|+++|++ ++||+|.
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~~c~  154 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS-DKSGPSS  154 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS-CCCSCSC
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC-CCCCCCC
Confidence            9999999999999999999999997  99999999999999999999 9999985

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=4e-27  Score=154.69  Aligned_cols=114  Identities=26%  Similarity=0.512  Sum_probs=105.4

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHh---hcCCCcccccccccccCCchH
Q psy4683          51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSR---HIKDYNVFCKICQLGFLSKNE  127 (196)
Q Consensus        51 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~  127 (196)
                      +++++|.|..|++.|.+...|..|+ ..|.++++|.|+.|++.|.....|..|++.   +.++++|.|..|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHH-HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHH-HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            4567899999999999999999999 678899999999999999999999999985   567889999999999999999


Q ss_pred             HHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         128 LNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       128 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |..|++.|++++||.|++|++.|.+...|..|++..++
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            99999999999999999999999999999999986443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.94  E-value=1.6e-27  Score=155.58  Aligned_cols=112  Identities=24%  Similarity=0.544  Sum_probs=103.7

Q ss_pred             CCCCcccccc--cccccCCHHHHHHHHHhhcCCCCCccCC--CCcccccCchHHHHHHHhhcCCCcccccccccccCCch
Q psy4683          51 TSDTKFPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKN  126 (196)
Q Consensus        51 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  126 (196)
                      +++++|.|..  |++.|.+...|..|+ ..|.++++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHH-HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            4567899997  999999999999999 678888999999  79999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhcCCCCccC--cccccccCCchhHHHHHHHh
Q psy4683         127 ELNVHNIKQHCAQPHTC--SVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       127 ~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  163 (196)
                      .|..|++.|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  88999999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.94  E-value=2.1e-27  Score=156.15  Aligned_cols=115  Identities=23%  Similarity=0.415  Sum_probs=103.4

Q ss_pred             CCccccc--ccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccc--cccccCCchHH
Q psy4683          53 DTKFPCR--LCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKI--CQLGFLSKNEL  128 (196)
Q Consensus        53 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l  128 (196)
                      .++|.|.  .|++.|.+...|..|+ ..| +.++|.|+.|++.|.....|..|++.|.++++|.|..  |++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL-HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH-GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH-HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            3579999  8999999999999999 667 8899999999999999999999999999999999986  99999999999


Q ss_pred             HhhhhhhcCCCCccCc--ccccccCCchhHHHHHHHhhccCCcc
Q psy4683         129 NVHNIKQHCAQPHTCS--VCKKIFVNKKNLTTHKKIHLALDRNY  170 (196)
Q Consensus       129 ~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  170 (196)
                      ..|++.|+++++|.|+  .|++.|.+.+.|..|+++|++ ++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~-~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK-AKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc-cccC
Confidence            9999999999999996  499999999999999999999 7776

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=1.8e-27  Score=157.80  Aligned_cols=108  Identities=17%  Similarity=0.309  Sum_probs=87.4

Q ss_pred             CCCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccC
Q psy4683          44 LDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFL  123 (196)
Q Consensus        44 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  123 (196)
                      ..+...++|+++|.|+.|++.|.....|..|+ ..|.+++||.|+.|++.|.....|..|++.|.++++|.|..|++.|.
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHF-NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHH-HHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHH-HHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcC
Confidence            34455667778888888888888888888888 56888888888888888888888888888888888888888888888


Q ss_pred             CchHHHhhhhhhcCCC------CccCcccccccCC
Q psy4683         124 SKNELNVHNIKQHCAQ------PHTCSVCKKIFVN  152 (196)
Q Consensus       124 ~~~~l~~H~~~~~~~~------~~~C~~C~~~f~~  152 (196)
                      ..+.|..|++.+++++      +|.|..|++.|..
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            8888888888887654      4778888877764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.93  E-value=2.2e-27  Score=157.40  Aligned_cols=92  Identities=18%  Similarity=0.264  Sum_probs=88.7

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhH
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNL  156 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l  156 (196)
                      ..|.|+++|.|++|++.|.....|..|++.|.++++|.|..|+++|...+.|..|+++|++++||.|++|++.|...+.|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCc
Q psy4683         157 TTHKKIHLALDRN  169 (196)
Q Consensus       157 ~~H~~~h~~~~~~  169 (196)
                      ..|+++|++ ++|
T Consensus        95 ~~H~~~hh~-~~p  106 (133)
T 2lt7_A           95 SSHIKSVHS-QDP  106 (133)
T ss_dssp             HHHHHHHTC-CCT
T ss_pred             HHHhHHhcC-CCC
Confidence            999999987 554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=5.2e-27  Score=159.98  Aligned_cols=139  Identities=17%  Similarity=0.311  Sum_probs=122.1

Q ss_pred             cccccchhhhhcCCCCcccccCCCCCCC---CCCCCCcccccc-----cccccCCHHHHHHHHHhhcCCCCCccCCC--C
Q psy4683          21 WSFLEDENEKRNFSSEEDEESDKLDDED---NVTSDTKFPCRL-----CSQEFDTKEQRKKHERKDHATQGLFSCDL--C   90 (196)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~C~~-----C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C   90 (196)
                      .++.++.|+.. |.    ....+..|..   .+.+.++|.|..     |++.|.+...|..|+ ..|.+++||.|+.  |
T Consensus         2 ~~~~C~~C~~~-f~----~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C   75 (155)
T 2gli_A            2 TDCRWDGCSQE-FD----SQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTGEKPHKCTFEGC   75 (155)
T ss_dssp             CBCCBTTCCCB-CS----CHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT-HHHHCCCCCCCCSTTC
T ss_pred             CcCCcCCCccc-cC----CHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            35667777776 44    3556666655   677788898875     349999999999999 6788999999985  9


Q ss_pred             cccccCchHHHHHHHhhcCCCcccccc--cccccCCchHHHhhh-hhhcCCCCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683          91 SYTSTQKYYLVKHKSRHIKDYNVFCKI--CQLGFLSKNELNVHN-IKQHCAQPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus        91 ~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++.|.....|..|++.|.++++|.|..  |++.|...+.|..|+ +.|.++++|.|+.  |++.|.+.+.|..|+++|+|
T Consensus        76 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           76 RKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            999999999999999999999999998  999999999999998 8999999999988  99999999999999999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.5e-26  Score=151.88  Aligned_cols=113  Identities=25%  Similarity=0.449  Sum_probs=107.0

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhh---hcCCCCccCcccccccCCchhH
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIK---QHCAQPHTCSVCKKIFVNKKNL  156 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---~~~~~~~~C~~C~~~f~~~~~l  156 (196)
                      ++.++|.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|..|+..   +.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            5678999999999999999999999999999999999999999999999999996   5678999999999999999999


Q ss_pred             HHHHHHhhccCCccccC---ceeccCCchhhhhhhHhhhh
Q psy4683         157 TTHKKIHLALDRNYQCD---TYFYEGNSLAWEDTSLEITL  193 (196)
Q Consensus       157 ~~H~~~h~~~~~~~~C~---~~f~~~~~l~~H~~~~h~~~  193 (196)
                      ..|+++|++ ++||+|+   +.|...+.|..|++.+|.+.
T Consensus        83 ~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           83 RLHMVSHTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHSS-SCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHcCC-CCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999999999 9999988   99999999999999888754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=2.3e-26  Score=150.01  Aligned_cols=109  Identities=20%  Similarity=0.467  Sum_probs=104.3

Q ss_pred             CCCCCccCCC--CcccccCchHHHHHHHhhcCCCccccc--ccccccCCchHHHhhhhhhcCCCCccCcccccccCCchh
Q psy4683          80 ATQGLFSCDL--CSYTSTQKYYLVKHKSRHIKDYNVFCK--ICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKN  155 (196)
Q Consensus        80 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~  155 (196)
                      +++++|.|..  |++.|.+...|..|++.|.++++|.|.  .|++.|.....|..|++.|+++++|.|+.|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4678999997  999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCcccc--C---ceeccCCchhhhhhhH
Q psy4683         156 LTTHKKIHLALDRNYQC--D---TYFYEGNSLAWEDTSL  189 (196)
Q Consensus       156 l~~H~~~h~~~~~~~~C--~---~~f~~~~~l~~H~~~~  189 (196)
                      |..|+++|++ +++|+|  +   +.|...+.|..|+++|
T Consensus        82 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTG-EKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHT-CCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcC-CCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999 899999  5   9999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.92  E-value=3.5e-25  Score=145.45  Aligned_cols=110  Identities=25%  Similarity=0.442  Sum_probs=101.0

Q ss_pred             CCCCccCC--CCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcc--cccccCCchhH
Q psy4683          81 TQGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSV--CKKIFVNKKNL  156 (196)
Q Consensus        81 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l  156 (196)
                      .+++|.|+  .|++.|.+...|..|++.| +.++|.|..|++.|.....|..|++.|+++++|.|+.  |++.|.+...|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789999  8999999999999999999 8899999999999999999999999999999999986  99999999999


Q ss_pred             HHHHHHhhccCCcccc--C---ceeccCCchhhhhhhHhhh
Q psy4683         157 TTHKKIHLALDRNYQC--D---TYFYEGNSLAWEDTSLEIT  192 (196)
Q Consensus       157 ~~H~~~h~~~~~~~~C--~---~~f~~~~~l~~H~~~~h~~  192 (196)
                      ..|+++|++ +++|.|  .   +.|...+.|..|+++|++.
T Consensus        81 ~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           81 RTHVRIHTG-DRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             HHHHHHHHC-CCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             HHHHHHhCC-CCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            999999999 899988  2   9999999999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=1.1e-23  Score=143.52  Aligned_cols=113  Identities=22%  Similarity=0.309  Sum_probs=103.6

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHh-hcCCCc--------ccccccccccCCchHHHhhhhhhcCCCCccCcc--cc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSR-HIKDYN--------VFCKICQLGFLSKNELNVHNIKQHCAQPHTCSV--CK  147 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~  147 (196)
                      .....+|.|..|++.|.+...|..|++. |.+..+        |.|..|++.|.....|..|++.|+++++|.|..  |+
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            4456789999999999999999999997 766554        799999999999999999999999999999998  99


Q ss_pred             cccCCchhHHHHHHHhhccCCccccC-----ceeccCCchhhhhhhHhhh
Q psy4683         148 KIFVNKKNLTTHKKIHLALDRNYQCD-----TYFYEGNSLAWEDTSLEIT  192 (196)
Q Consensus       148 ~~f~~~~~l~~H~~~h~~~~~~~~C~-----~~f~~~~~l~~H~~~~h~~  192 (196)
                      +.|.....|..|+++|++ +++|+|.     +.|...+.|.+|+++|+++
T Consensus       100 ~~f~~~~~L~~H~~~h~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTG-EKPFKCEFEGCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             CEESCHHHHHHHHTTTCS-SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred             CccCCHHHHHHHHHhhCC-CCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            999999999999999999 8999774     8999999999999988764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.89  E-value=7.7e-23  Score=130.58  Aligned_cols=89  Identities=26%  Similarity=0.556  Sum_probs=48.9

Q ss_pred             CCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHH
Q psy4683          82 QGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKK  161 (196)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  161 (196)
                      .++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++++|.|.+|++.|.....|..|++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            34455555555555555555555555555555555555555555555555555555555666666666666666666666


Q ss_pred             HhhccCCccc
Q psy4683         162 IHLALDRNYQ  171 (196)
Q Consensus       162 ~h~~~~~~~~  171 (196)
                      +|++ +++|.
T Consensus        95 ~H~~-~~~~~  103 (106)
T 2ee8_A           95 LHMQ-TSSPT  103 (106)
T ss_dssp             HTTS-CCCCC
T ss_pred             HhCC-CCCCc
Confidence            6655 55554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=8.5e-23  Score=128.05  Aligned_cols=86  Identities=24%  Similarity=0.407  Sum_probs=51.0

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHH
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTH  159 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  159 (196)
                      .++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            34455555555555555555555555555555555555665565555566666555556666666666666666666666


Q ss_pred             HHHhhc
Q psy4683         160 KKIHLA  165 (196)
Q Consensus       160 ~~~h~~  165 (196)
                      +++|++
T Consensus        84 ~~~h~~   89 (96)
T 2dmd_A           84 LRSHTG   89 (96)
T ss_dssp             HTTCCS
T ss_pred             HHHhcC
Confidence            666655

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.87  E-value=1.2e-21  Score=124.97  Aligned_cols=94  Identities=23%  Similarity=0.491  Sum_probs=88.1

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHH
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELN  129 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  129 (196)
                      ...+++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|.
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            34567899999999999999999999 67889999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCccCc
Q psy4683         130 VHNIKQHCAQPHTCS  144 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~  144 (196)
                      .|+++|++++||.+.
T Consensus        91 ~H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           91 VHKTLHMQTSSPTAA  105 (106)
T ss_dssp             HHHHHTTSCCCCCCC
T ss_pred             HHHHHhCCCCCCcCC
Confidence            999999999998653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.86  E-value=2.1e-22  Score=124.70  Aligned_cols=84  Identities=25%  Similarity=0.517  Sum_probs=64.9

Q ss_pred             CCCccCC--CCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHH
Q psy4683          82 QGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTH  159 (196)
Q Consensus        82 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  159 (196)
                      ++||.|+  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4677776  47777777777777777777777777777777777777777777777777788888888888888888888


Q ss_pred             HHHhhc
Q psy4683         160 KKIHLA  165 (196)
Q Consensus       160 ~~~h~~  165 (196)
                      +++|++
T Consensus        82 ~~~H~~   87 (90)
T 1a1h_A           82 TKIHLR   87 (90)
T ss_dssp             HGGGGC
T ss_pred             HHHhcc
Confidence            887776

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.86  E-value=3.4e-22  Score=121.57  Aligned_cols=82  Identities=28%  Similarity=0.553  Sum_probs=63.1

Q ss_pred             CccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHh
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      ||.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++++|.|+.|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            46777777777777777777777777777777777777777777777777777777888888888888888888888877


Q ss_pred             hc
Q psy4683         164 LA  165 (196)
Q Consensus       164 ~~  165 (196)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=2.7e-22  Score=128.33  Aligned_cols=92  Identities=18%  Similarity=0.315  Sum_probs=47.2

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchH
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNE  127 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  127 (196)
                      ..+.++++|.|..|++.|.....|..|+ ..|  .++|.|..|++.|.....|..|++ |.++++|.|..|++.|.....
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHE-RLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHH-HHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHH-HHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            3444455555555555555555555555 333  234555555555555555555553 555555555555555555555


Q ss_pred             HHhhhh-hhcCCCCccC
Q psy4683         128 LNVHNI-KQHCAQPHTC  143 (196)
Q Consensus       128 l~~H~~-~~~~~~~~~C  143 (196)
                      |..|++ .|.++++|.|
T Consensus        85 L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCC
Confidence            555553 4444444443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=6.9e-23  Score=132.74  Aligned_cols=95  Identities=19%  Similarity=0.166  Sum_probs=65.5

Q ss_pred             HHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHh--hcCCCccc-cccccccc--CCchHHHhhhhhhcCCCCccCc
Q psy4683          70 QRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSR--HIKDYNVF-CKICQLGF--LSKNELNVHNIKQHCAQPHTCS  144 (196)
Q Consensus        70 ~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~~~~~~~~C~  144 (196)
                      .|..|+ ..|.+++||.|..|++.|.....|..|++.  |.+.+++. |..|++.|  .....|..|+++|++++||.|.
T Consensus         6 ~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            6 SGKLYG-SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCC-CCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhe-eeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            345555 455666666666666666666666666665  54454443 77777777  6777777787777777888888


Q ss_pred             ccccccCCchhHHHHHHHhhc
Q psy4683         145 VCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       145 ~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +|++.|.....|..|+++|+.
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCccCCHHHHHHHHHHhCC
Confidence            888888888888888877765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=2.3e-21  Score=121.49  Aligned_cols=91  Identities=23%  Similarity=0.431  Sum_probs=85.6

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHH
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELN  129 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  129 (196)
                      ..++++|.|..|++.|.....|..|+ ..|.+.++|.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            45667899999999999999999999 67999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcCCCCc
Q psy4683         130 VHNIKQHCAQPH  141 (196)
Q Consensus       130 ~H~~~~~~~~~~  141 (196)
                      .|++.|+++++.
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999987654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.4e-21  Score=125.55  Aligned_cols=87  Identities=23%  Similarity=0.377  Sum_probs=75.1

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHH
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLT  157 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~  157 (196)
                      .|.++++|.| .|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++++|.|++|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4677888888 788888888888888888888888888888888888888888888888888899999999999999999


Q ss_pred             HHHHHhhc
Q psy4683         158 THKKIHLA  165 (196)
Q Consensus       158 ~H~~~h~~  165 (196)
                      .|+++|+.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99988875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=4e-21  Score=122.81  Aligned_cols=93  Identities=17%  Similarity=0.306  Sum_probs=87.1

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhH
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNL  156 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l  156 (196)
                      ..|.++++|.|..|++.|.....|..|++.|.  ++|.|..|++.|.....|..|++ |++++||.|.+|++.|.....|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            56889999999999999999999999999984  78999999999999999999996 9999999999999999999999


Q ss_pred             HHHHH-HhhccCCccccC
Q psy4683         157 TTHKK-IHLALDRNYQCD  173 (196)
Q Consensus       157 ~~H~~-~h~~~~~~~~C~  173 (196)
                      ..|++ +|.+ +++|.|.
T Consensus        86 ~~H~~~~H~~-~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQ-NNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCC-CCCCCCC
T ss_pred             HHHHHHHcCC-CCCCCCC
Confidence            99998 6777 8999876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.5e-21  Score=119.87  Aligned_cols=86  Identities=26%  Similarity=0.505  Sum_probs=64.7

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCC--CCccCcccccccCCchhHH
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCA--QPHTCSVCKKIFVNKKNLT  157 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--~~~~C~~C~~~f~~~~~l~  157 (196)
                      .++++|.|..|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++  ++|.|+.|++.|.....|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            45667777777777777777777777777777777777777777777777777777775  7788888888888888888


Q ss_pred             HHHH-Hhhc
Q psy4683         158 THKK-IHLA  165 (196)
Q Consensus       158 ~H~~-~h~~  165 (196)
                      .|++ +|.+
T Consensus        83 ~H~~~~H~~   91 (95)
T 2yt9_A           83 GHIKQVHSG   91 (95)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhcCC
Confidence            8875 4554

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.83  E-value=5.4e-21  Score=118.29  Aligned_cols=86  Identities=21%  Similarity=0.431  Sum_probs=80.1

Q ss_pred             CCccccc--ccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHh
Q psy4683          53 DTKFPCR--LCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNV  130 (196)
Q Consensus        53 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  130 (196)
                      +++|.|.  .|++.|.....|..|+ ..|.+.++|.|+.|++.|.....|..|++.|.++++|.|..|++.|...+.|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            5689998  6999999999999999 678899999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcCCC
Q psy4683         131 HNIKQHCAQ  139 (196)
Q Consensus       131 H~~~~~~~~  139 (196)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=6.3e-21  Score=115.90  Aligned_cols=82  Identities=23%  Similarity=0.460  Sum_probs=78.2

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhh
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIK  134 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  134 (196)
                      ||.|..|++.|.....|..|+ ..|.++++|.|+.|++.|.....|..|++.|.++++|.|..|++.|...+.|..|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            589999999999999999999 6788999999999999999999999999999999999999999999999999999999


Q ss_pred             hcC
Q psy4683         135 QHC  137 (196)
Q Consensus       135 ~~~  137 (196)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=4e-21  Score=124.33  Aligned_cols=106  Identities=22%  Similarity=0.240  Sum_probs=94.1

Q ss_pred             cccCCCCCCCCCCCCCcccccccccccCCHHHHHHHHHhh--cCCCCCc-cCCCCcccc--cCchHHHHHHHhhcCCCcc
Q psy4683          39 EESDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKD--HATQGLF-SCDLCSYTS--TQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~  113 (196)
                      ....+..+...++++++|.|..|++.|.....|..|+ ..  |.+.+++ .|..|++.|  .....|..|++.|.++++|
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHH-HHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            3567888999999999999999999999999999999 55  5555554 599999999  8999999999999999999


Q ss_pred             cccccccccCCchHHHhhhhhhcCCCCccCcc
Q psy4683         114 FCKICQLGFLSKNELNVHNIKQHCAQPHTCSV  145 (196)
Q Consensus       114 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~  145 (196)
                      .|..|++.|.....|..|++.++......++.
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence            99999999999999999999998776665553

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.6e-20  Score=118.39  Aligned_cols=88  Identities=25%  Similarity=0.461  Sum_probs=83.2

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchH
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNE  127 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  127 (196)
                      ..++++++|.| .|++.|.....|..|+ ..|.+.++|.|+.|++.|.....|..|++.|.++++|.|..|++.|.....
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHH-HHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHH
Confidence            45678899999 9999999999999999 678899999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhcC
Q psy4683         128 LNVHNIKQHC  137 (196)
Q Consensus       128 l~~H~~~~~~  137 (196)
                      |..|++.|+.
T Consensus        81 l~~H~~~~~~   90 (110)
T 2csh_A           81 FHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHccc
Confidence            9999998874

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=6.5e-20  Score=114.56  Aligned_cols=87  Identities=21%  Similarity=0.424  Sum_probs=80.6

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCC--CcccccccccccCCchHH
Q psy4683          51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD--YNVFCKICQLGFLSKNEL  128 (196)
Q Consensus        51 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l  128 (196)
                      .++++|.|..|++.|.....|..|+ ..|.++++|.|+.|++.|.....|..|++.|.++  ++|.|..|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHH-HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHH-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            4667899999999999999999999 6799999999999999999999999999999987  899999999999999999


Q ss_pred             Hhhhh-hhcCC
Q psy4683         129 NVHNI-KQHCA  138 (196)
Q Consensus       129 ~~H~~-~~~~~  138 (196)
                      ..|++ .|.++
T Consensus        82 ~~H~~~~H~~~   92 (95)
T 2yt9_A           82 NGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHTSCCC
T ss_pred             HHHHHHhcCCC
Confidence            99986 66654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.80  E-value=8.8e-20  Score=115.00  Aligned_cols=81  Identities=30%  Similarity=0.528  Sum_probs=41.3

Q ss_pred             CccCCC--CcccccCchHHHHHHHhhcCCCccccc--ccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHH
Q psy4683          84 LFSCDL--CSYTSTQKYYLVKHKSRHIKDYNVFCK--ICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTH  159 (196)
Q Consensus        84 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  159 (196)
                      +|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|+++++|.|++|++.|.....|..|
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   94 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH   94 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHH
Confidence            344443  444444444444444444444444443  3555555555555555555555555555555555555555555


Q ss_pred             HHHhh
Q psy4683         160 KKIHL  164 (196)
Q Consensus       160 ~~~h~  164 (196)
                      +++|+
T Consensus        95 ~~~H~   99 (100)
T 2ebt_A           95 MKRHQ   99 (100)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            55554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.79  E-value=5.6e-20  Score=113.42  Aligned_cols=81  Identities=28%  Similarity=0.514  Sum_probs=47.2

Q ss_pred             CCccCCC--CcccccCchHHHHHHHhhcCCCccccc--ccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHH
Q psy4683          83 GLFSCDL--CSYTSTQKYYLVKHKSRHIKDYNVFCK--ICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTT  158 (196)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~  158 (196)
                      ++|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|+++++|.|+.|++.|...+.|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3455555  555555555555555555555555554  356666555556666655666666666666666666666666


Q ss_pred             HHHHh
Q psy4683         159 HKKIH  163 (196)
Q Consensus       159 H~~~h  163 (196)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            65554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.78  E-value=4.6e-20  Score=104.72  Aligned_cols=56  Identities=23%  Similarity=0.549  Sum_probs=37.0

Q ss_pred             CCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         110 DYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++||.|..|+++|...+.|..|+++|++++||.|.+||+.|...+.|..|+++|+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            45666666666666666666666666666666666666666666666666666665

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.77  E-value=3.3e-20  Score=114.37  Aligned_cols=82  Identities=20%  Similarity=0.293  Sum_probs=52.7

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHH
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      +||.|+.|++.|.....|..|++.|.++++|.|..|++.|.....|..|++.+++ .+|.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4566666666666666666666666666666666666666666666666666653 556666666666666666666666


Q ss_pred             hhc
Q psy4683         163 HLA  165 (196)
Q Consensus       163 h~~  165 (196)
                      +++
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=2.6e-18  Score=108.20  Aligned_cols=86  Identities=17%  Similarity=0.429  Sum_probs=79.8

Q ss_pred             CCCCcccccc--cccccCCHHHHHHHHHhhcCCCCCccCC--CCcccccCchHHHHHHHhhcCCCcccccccccccCCch
Q psy4683          51 TSDTKFPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKN  126 (196)
Q Consensus        51 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  126 (196)
                      ...++|.|..  |++.|.....|..|+ ..|.+.++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHH-HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHH-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            3445799997  999999999999999 679999999996  69999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhcC
Q psy4683         127 ELNVHNIKQHC  137 (196)
Q Consensus       127 ~l~~H~~~~~~  137 (196)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=5.5e-19  Score=100.25  Aligned_cols=57  Identities=18%  Similarity=0.380  Sum_probs=34.0

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          53 DTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        53 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      ++||.|+.||+.|.....|..|+ .+|++++||.|.+||+.|.....|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            35566666666666666666666 4466666666666666666666666666665544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.76  E-value=1.7e-18  Score=106.74  Aligned_cols=83  Identities=19%  Similarity=0.489  Sum_probs=78.2

Q ss_pred             CCcccccc--cccccCCHHHHHHHHHhhcCCCCCccCC--CCcccccCchHHHHHHHhhcCCCcccccccccccCCchHH
Q psy4683          53 DTKFPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNEL  128 (196)
Q Consensus        53 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  128 (196)
                      ..+|.|..  |++.|.....|..|+ ..|.+.++|.|+  .|++.|.....|..|++.|.++++|.|..|++.|...+.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            35799999  999999999999999 679999999997  5999999999999999999999999999999999999999


Q ss_pred             Hhhhhhhc
Q psy4683         129 NVHNIKQH  136 (196)
Q Consensus       129 ~~H~~~~~  136 (196)
                      ..|+++|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999873

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.75  E-value=1.3e-18  Score=106.18  Aligned_cols=78  Identities=17%  Similarity=0.261  Sum_probs=53.7

Q ss_pred             CccC--CCCcccccCchHHHHHHHhhcCCCcccccc--cccccCCchHHHhhhhhhcCCCCccCcc---cccccCCchhH
Q psy4683          84 LFSC--DLCSYTSTQKYYLVKHKSRHIKDYNVFCKI--CQLGFLSKNELNVHNIKQHCAQPHTCSV---CKKIFVNKKNL  156 (196)
Q Consensus        84 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~---C~~~f~~~~~l  156 (196)
                      ||.|  +.|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|++   |.|..   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4566  666666666666666666666666667766  77777777777777766666   67777   77777777777


Q ss_pred             HHHHHHhh
Q psy4683         157 TTHKKIHL  164 (196)
Q Consensus       157 ~~H~~~h~  164 (196)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            77776653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.74  E-value=2.2e-19  Score=110.64  Aligned_cols=81  Identities=20%  Similarity=0.346  Sum_probs=76.8

Q ss_pred             CCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC---ceeccCCchhhhh
Q psy4683         110 DYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD---TYFYEGNSLAWED  186 (196)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~---~~f~~~~~l~~H~  186 (196)
                      +++|.|..|++.|.....|..|+++|++++||.|+.|++.|.....|..|+++|++  .+|.|.   +.|...+.|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHH
Confidence            47899999999999999999999999999999999999999999999999999986  788887   9999999999999


Q ss_pred             hhHhhh
Q psy4683         187 TSLEIT  192 (196)
Q Consensus       187 ~~~h~~  192 (196)
                      +.+|+.
T Consensus        79 ~~~h~~   84 (88)
T 1llm_C           79 ARLKKL   84 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999974

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.1e-18  Score=102.64  Aligned_cols=69  Identities=23%  Similarity=0.397  Sum_probs=33.9

Q ss_pred             CCCccCCC--CcccccCchHHHHHHH-hhcCCCcccccc--cccccCCchHHHhhhhhhcCCCCccCccccccc
Q psy4683          82 QGLFSCDL--CSYTSTQKYYLVKHKS-RHIKDYNVFCKI--CQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIF  150 (196)
Q Consensus        82 ~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f  150 (196)
                      +++|.|..  |++.|.....|..|++ .|.++++|.|..  |++.|.....|..|+++|++++||.|.+|++.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            34444443  4444444444444444 344444455544  555555555555555555555555555555544

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=4.3e-18  Score=104.19  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=39.1

Q ss_pred             HHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCC----CcccccccccccCCchHHHhhhhhhcCCCCccCccccc
Q psy4683          73 KHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD----YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKK  148 (196)
Q Consensus        73 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~  148 (196)
                      +|+ .+|.+++||.|..|++.|.....|..|++.|...    ++|.|..|++.|.....|..|++.|++++++.|..|+.
T Consensus         5 ~H~-~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            5 SSG-RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             CCS-TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccc-ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            344 3445555555555555555555555555444332    44555555555555555555555555555555555554


Q ss_pred             c
Q psy4683         149 I  149 (196)
Q Consensus       149 ~  149 (196)
                      .
T Consensus        84 ~   84 (86)
T 1x6h_A           84 S   84 (86)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.4e-17  Score=100.25  Aligned_cols=73  Identities=22%  Similarity=0.440  Sum_probs=67.7

Q ss_pred             CCCCcccccc--cccccCCHHHHHHHHHhhcCCCCCccCCC--CcccccCchHHHHHHHhhcCCCcccccccccccC
Q psy4683          51 TSDTKFPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCDL--CSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFL  123 (196)
Q Consensus        51 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  123 (196)
                      +++++|.|..  |++.|.....|..|++..|.++++|.|+.  |++.|.....|..|++.|.++++|.|..|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567899997  99999999999999954799999999999  9999999999999999999999999999999883

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.71  E-value=1.1e-18  Score=115.11  Aligned_cols=112  Identities=17%  Similarity=0.211  Sum_probs=83.3

Q ss_pred             CCCCCCccccccccccc--CCHHHHHHHHHhhcCCCCCccCCCCccccc------CchHHHHHHHhhcCCCccccccccc
Q psy4683          49 NVTSDTKFPCRLCSQEF--DTKEQRKKHERKDHATQGLFSCDLCSYTST------QKYYLVKHKSRHIKDYNVFCKICQL  120 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f--~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~  120 (196)
                      .+.+.++|.|...+...  .....+..+. . ....+++.|..|++.|.      ....|..|+ .|.++++|.|..|++
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~~~-l-~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k   82 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQ-L-TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLM   82 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECCHHHHHHHTT-S-CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCC
T ss_pred             hcccccccccccCCeeeeecHHhhhcccc-C-ChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCc
Confidence            45566788777655443  2222222232 1 22345678888877665      445666666 588899999999999


Q ss_pred             ccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         121 GFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       121 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.....|..|+++|  ++||.|..|++.|...+.|..|+++|++
T Consensus        83 ~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           83 PFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             EESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             ccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            999999999999988  8899999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.71  E-value=1.4e-17  Score=101.58  Aligned_cols=78  Identities=23%  Similarity=0.358  Sum_probs=73.9

Q ss_pred             cccc--cccccccCCHHHHHHHHHhhcCCCCCccCCC--CcccccCchHHHHHHHhhcCCCcccccc---cccccCCchH
Q psy4683          55 KFPC--RLCSQEFDTKEQRKKHERKDHATQGLFSCDL--CSYTSTQKYYLVKHKSRHIKDYNVFCKI---CQLGFLSKNE  127 (196)
Q Consensus        55 ~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~  127 (196)
                      ||.|  ..|++.|.....|..|+ ..|.+++||.|+.  |++.|.....|..|++.|.+   |.|..   |++.|...+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5899  99999999999999999 6799999999998  99999999999999999987   99999   9999999999


Q ss_pred             HHhhhhhhc
Q psy4683         128 LNVHNIKQH  136 (196)
Q Consensus       128 l~~H~~~~~  136 (196)
                      |..|++.|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999998875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=7.2e-18  Score=101.13  Aligned_cols=63  Identities=21%  Similarity=0.462  Sum_probs=33.4

Q ss_pred             CCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         109 KDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       109 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      ++++|.|..|++.|.....|..|++.|++++||.|++|++.|.....|..|+++|++ ++||+|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG-SGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC-CCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            344555555555555555555555555555555555555555555555555555555 555554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=5.3e-18  Score=106.49  Aligned_cols=76  Identities=14%  Similarity=0.145  Sum_probs=49.3

Q ss_pred             cCchHHHHHHHhhcCCCcccccccccccC-CchHHHhhhhhhcC-CCCccCcccccccCCchhHHHHHHHhhccCCccc
Q psy4683          95 TQKYYLVKHKSRHIKDYNVFCKICQLGFL-SKNELNVHNIKQHC-AQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQ  171 (196)
Q Consensus        95 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  171 (196)
                      .....+..|++.|.++++|.|..|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|+++|++ ++|+.
T Consensus         7 ~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~-~kp~~   84 (98)
T 2gqj_A            7 GPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS-AKPSD   84 (98)
T ss_dssp             CCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC-SCSSC
T ss_pred             CCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC-CCCCC
Confidence            33444556666666666666666666666 66666666666666 6667777777777777777777766666 55543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=9e-17  Score=98.22  Aligned_cols=81  Identities=17%  Similarity=0.290  Sum_probs=72.9

Q ss_pred             CCCCCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCC---CCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          42 DKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQ---GLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        42 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      .+..+...+.++++|.|..|++.|.....|..|++..|...   ++|.|..|++.|.....|..|++.|.+++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            35678889999999999999999999999999995555543   799999999999999999999999999999999999


Q ss_pred             cccc
Q psy4683         119 QLGF  122 (196)
Q Consensus       119 ~~~f  122 (196)
                      +..+
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=5.2e-17  Score=102.08  Aligned_cols=72  Identities=15%  Similarity=0.309  Sum_probs=53.5

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhc---CCCCCccCCCCcccccCchHHHHH-HHhhcCCCcccccccc
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDH---ATQGLFSCDLCSYTSTQKYYLVKH-KSRHIKDYNVFCKICQ  119 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~  119 (196)
                      ....+++||.|..|++.|.....|..|++..|   .+++||.|..||+.|.....|..| ++.|.++++|.|.++.
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            34456677888888888888888888874457   456778888888888888888888 6778878888777643

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=6.7e-17  Score=100.90  Aligned_cols=72  Identities=17%  Similarity=0.127  Sum_probs=49.3

Q ss_pred             cccCchHHHHHHHhhcCCCccccccccccc-CCchHHHhhhhhhcCCCCccCcccccccCCchhHHHH-HHHhhc
Q psy4683          93 TSTQKYYLVKHKSRHIKDYNVFCKICQLGF-LSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTH-KKIHLA  165 (196)
Q Consensus        93 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  165 (196)
                      .|.....+..|++.+.++++|.|..|++.| .....|..|+++| +++||.|.+|++.|.....|..| +++|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            445555666666666666677777777777 6777777777777 66777777777777777777777 666655

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.68  E-value=5.2e-17  Score=96.58  Aligned_cols=63  Identities=30%  Similarity=0.560  Sum_probs=40.7

Q ss_pred             hcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcc
Q psy4683         107 HIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY  170 (196)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  170 (196)
                      +.++++|.|..|++.|.....|..|++.|+++++|.|.+|++.|.....|.+|+++|++ ++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG-EKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC-SCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC-CCCC
Confidence            34455666666666666666666666666666666666666666666666666666666 5654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.7e-16  Score=95.00  Aligned_cols=66  Identities=20%  Similarity=0.414  Sum_probs=48.1

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      ...++++|.|..|++.|.....|..|+ ..|.+++||.|+.|++.|.....|..|++.|.++++|.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344556777777777777777777777 567777777777777777777777777777777777765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=7.8e-17  Score=101.27  Aligned_cols=67  Identities=13%  Similarity=0.318  Sum_probs=40.6

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHH-hh---cCCCcccccccccccCCchHHHhh-hhhhcCCCCccCccc
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKS-RH---IKDYNVFCKICQLGFLSKNELNVH-NIKQHCAQPHTCSVC  146 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~C~~C  146 (196)
                      .+++||.|..|++.|.....|..|++ .|   .++++|.|..|++.|...+.|..| +++|++++||.|.++
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            45566666666666666666666665 35   345566666666666666666666 556666666666553

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=5.7e-17  Score=101.75  Aligned_cols=77  Identities=23%  Similarity=0.381  Sum_probs=58.2

Q ss_pred             CCHHHHHHHHHhhcCCCCCccCCCCccccc-CchHHHHHHHhhcC-CCcccccccccccCCchHHHhhhhhhcCCCCccC
Q psy4683          66 DTKEQRKKHERKDHATQGLFSCDLCSYTST-QKYYLVKHKSRHIK-DYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTC  143 (196)
Q Consensus        66 ~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  143 (196)
                      .....+..|+ ..|.++++|.|..|++.|. ....|..|++.|.+ +++|.|..|++.|.....|..|++.|++++|...
T Consensus         7 ~~~~~~~~h~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A            7 GPGGPEEQWQ-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCCCSCSHHH-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCCcHHHHH-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            3344456677 5677778888888888888 78888888888777 7788888888888888888888888887777543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=3.4e-16  Score=93.00  Aligned_cols=64  Identities=20%  Similarity=0.399  Sum_probs=44.9

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcc
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (196)
                      .+.++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|++.|.++++|
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHH-HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHH-HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            334456677777777777777777777 5577777777777777777777777777777766654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.7e-16  Score=93.28  Aligned_cols=62  Identities=23%  Similarity=0.321  Sum_probs=40.8

Q ss_pred             hcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCc
Q psy4683         107 HIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRN  169 (196)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  169 (196)
                      |.++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++ ++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG-DMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS-SSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC-CCC
Confidence            44556666666666666666666666666666666666666666666666666666666 554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.1e-16  Score=97.87  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=68.7

Q ss_pred             ccccCCHHHHHHHHHhhcCCCCCccCCCCcccc-cCchHHHHHHHhhcCCCcccccccccccCCchHHHhh-hhhhcCCC
Q psy4683          62 SQEFDTKEQRKKHERKDHATQGLFSCDLCSYTS-TQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVH-NIKQHCAQ  139 (196)
Q Consensus        62 ~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~  139 (196)
                      ...|.....|..|+ ..|.+.++|.|+.|++.| .....|..|++.| ++++|.|..|++.|...+.|..| +++|+++.
T Consensus        13 ~~~~~~~~~~~~~~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           13 PPVYAAGSLEEQWY-LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             CCSSCTTCHHHHHH-HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCCCCchHHHHHH-HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            34566777888888 667788999999999999 8999999999999 99999999999999999999999 88888655


Q ss_pred             CccC
Q psy4683         140 PHTC  143 (196)
Q Consensus       140 ~~~C  143 (196)
                      .+.+
T Consensus        91 ~~~~   94 (96)
T 2ctd_A           91 SGPS   94 (96)
T ss_dssp             SCSC
T ss_pred             CCCC
Confidence            4443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.63  E-value=1.6e-17  Score=109.40  Aligned_cols=112  Identities=11%  Similarity=0.055  Sum_probs=86.9

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHh---hcCCCcccccccccccC------CchHHHhhhhhhcCCCCccCcccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSR---HIKDYNVFCKICQLGFL------SKNELNVHNIKQHCAQPHTCSVCK  147 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~------~~~~l~~H~~~~~~~~~~~C~~C~  147 (196)
                      +.+.+.++|.|...+.....  .+..+.+.   ...++.+.|..|++.|.      ....|..|+ .|++++||.|.+|+
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTC
T ss_pred             hhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCC
Confidence            45788999999876654322  23333222   22356678888877665      556666666 68899999999999


Q ss_pred             cccCCchhHHHHHHHhhccCCccccC---ceeccCCchhhhhhhHhhhhh
Q psy4683         148 KIFVNKKNLTTHKKIHLALDRNYQCD---TYFYEGNSLAWEDTSLEITLL  194 (196)
Q Consensus       148 ~~f~~~~~l~~H~~~h~~~~~~~~C~---~~f~~~~~l~~H~~~~h~~~~  194 (196)
                      +.|.....|..|+++|   ++||+|.   +.|...+.|.+|++.||+..+
T Consensus        82 k~f~~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~v  128 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNICV  128 (129)
T ss_dssp             CEESSHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTCCCC
T ss_pred             cccCCHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCCccC
Confidence            9999999999999999   5899988   999999999999999998643

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.7e-16  Score=92.94  Aligned_cols=61  Identities=25%  Similarity=0.408  Sum_probs=44.7

Q ss_pred             HhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         105 SRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       105 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +.|.++++|.|..|++.|.....|..|++.|++++||.|++|++.|.....|..|+++|++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            3466667777777777777777777777777777777777777777777777777777776

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=7e-17  Score=96.75  Aligned_cols=68  Identities=18%  Similarity=0.372  Sum_probs=42.5

Q ss_pred             HHHHhhcCCCcccccccccccCCchHHHhhhh-hhcCC-CCccCcccccccCCchhHHHHHHHhhccCCc
Q psy4683         102 KHKSRHIKDYNVFCKICQLGFLSKNELNVHNI-KQHCA-QPHTCSVCKKIFVNKKNLTTHKKIHLALDRN  169 (196)
Q Consensus       102 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  169 (196)
                      +|++.|.++++|.|..|++.|.....|..|++ .|.++ ++|.|+.|++.|.....|..|++++++.+.|
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            45556666666666666666666666666665 34443 5677777777777777777777766553333

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.61  E-value=4.1e-16  Score=87.79  Aligned_cols=56  Identities=25%  Similarity=0.367  Sum_probs=38.3

Q ss_pred             CCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         110 DYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +++|.|..|++.|.....|..|+++|++++||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            45677777777777777777777777777777777777777777777777777653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=6.8e-16  Score=90.65  Aligned_cols=62  Identities=29%  Similarity=0.480  Sum_probs=39.5

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCc
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYN  112 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (196)
                      +.++++|.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|++.|+++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            44555666666666666666666666 446666666666666666666666666666666554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=5.9e-16  Score=89.83  Aligned_cols=60  Identities=23%  Similarity=0.405  Sum_probs=40.1

Q ss_pred             hhcCCCcccccccccccCCchHHHhhhhh-h-cCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         106 RHIKDYNVFCKICQLGFLSKNELNVHNIK-Q-HCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       106 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.++++|.|..|++.|.....|..|++. | .+++||.|+.|++.|...+.|..|+++|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45566666666666666666666666665 4 356677777777777777777777777664

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.4e-15  Score=88.15  Aligned_cols=63  Identities=17%  Similarity=0.386  Sum_probs=45.1

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      ...+.++++|.|..|++.|.....|..|+ ..|.+++||.|+.|++.|.....|..|++.|.++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            34566667777777777777777777777 5577777777777777777777777777777654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=5.6e-16  Score=94.09  Aligned_cols=59  Identities=27%  Similarity=0.418  Sum_probs=38.6

Q ss_pred             hcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHH-Hhhc
Q psy4683         107 HIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKK-IHLA  165 (196)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~  165 (196)
                      +.+.++|.|++|++.|.....|..|+++|++++||.|.+|++.|.....|.+|++ +|.+
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            4445566666666666666666666666666666777667777776667776653 3554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=6.9e-15  Score=87.93  Aligned_cols=67  Identities=18%  Similarity=0.355  Sum_probs=49.8

Q ss_pred             CCCCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCC-CCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          43 KLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQ-GLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        43 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      +..+...++++++|.|..|++.|.....|..|++..|.+. ++|.|+.|++.|.....|..|++.+++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4566777777778888888888888888888874466654 678888888888877888888776544

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=5.2e-15  Score=89.79  Aligned_cols=64  Identities=20%  Similarity=0.343  Sum_probs=51.6

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHH-hhcCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKS-RHIKD  110 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  110 (196)
                      ....+...++|.|+.|++.|.....|.+|+ ..|.+++||.|.+|++.|.....|..|++ .|.++
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHL-RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHH-HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhh-hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            344555667788999999999999999998 67888889999999999999999999964 56554

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.56  E-value=2.2e-15  Score=84.72  Aligned_cols=54  Identities=26%  Similarity=0.433  Sum_probs=37.7

Q ss_pred             cccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         112 NVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ||.|..|++.|.....|..|++.|++++||.|+.|++.|.....|..|+++|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            456666777776666777777766666777777777777777777777777666

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=3.7e-15  Score=83.77  Aligned_cols=54  Identities=26%  Similarity=0.540  Sum_probs=30.1

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhc
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      ++|.|..|++.|.....|..|+ ..|.+++||.|+.|++.|.....|..|++.|+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHL-RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHH-HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4555666666666666666665 34555555556555555555555555555543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=2.4e-17  Score=97.64  Aligned_cols=69  Identities=16%  Similarity=0.202  Sum_probs=49.4

Q ss_pred             HHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCccc
Q psy4683          70 QRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVC  146 (196)
Q Consensus        70 ~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C  146 (196)
                      .|..|+ ..|.+++||.|..|++.|.....|..       +++|.|..|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~l~~H~-~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQ-KIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCC-CCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHH-HHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            455666 55667777777777777766666554       5677777777777777777777777777777777766

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=4.1e-15  Score=86.18  Aligned_cols=59  Identities=17%  Similarity=0.379  Sum_probs=28.7

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhc-CCCCCccCCCCcccccCchHHHHHHHhhc
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDH-ATQGLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      ++++++|.|+.|++.|.....|..|++..| .+++||.|+.|++.|.....|..|++.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            334445555555555555555555553224 34455555555555555555555554443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=4.7e-15  Score=88.88  Aligned_cols=56  Identities=25%  Similarity=0.435  Sum_probs=31.2

Q ss_pred             hcCCCcccccccccccCCchHHHhhhhhhcC---CCCccCcccccccCCchhHHHHHHH
Q psy4683         107 HIKDYNVFCKICQLGFLSKNELNVHNIKQHC---AQPHTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      |.++++|.|..|++.|.....|..|++.|++   +++|.|.+|++.|.....|.+|++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHH
Confidence            3444555555555555555555555555553   5566666666666666666666644

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.52  E-value=1.6e-14  Score=81.16  Aligned_cols=55  Identities=24%  Similarity=0.484  Sum_probs=35.0

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      ||.|..|++.|.....|..|+ ..|.+++||.|+.|++.|.....|..|++.|.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            356666666666666666666 4466666666666666666666666666666554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=1.7e-14  Score=89.68  Aligned_cols=68  Identities=21%  Similarity=0.266  Sum_probs=43.4

Q ss_pred             ccCCCCcccccCchHHHHHHHh-hcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHh
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSR-HIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      |.|..|++.|.....|..|++. |.++++..+..|                    .+|.|..|++.|.....|..|+++|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c--------------------~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------YWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC--------------------CCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccce--------------------eccCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666655 554444221111                    1277888888888888888888888


Q ss_pred             hccCCccccC
Q psy4683         164 LALDRNYQCD  173 (196)
Q Consensus       164 ~~~~~~~~C~  173 (196)
                      ++ ++||+|.
T Consensus        86 ~~-~k~~~C~   94 (95)
T 2ej4_A           86 TG-EKSGPSS   94 (95)
T ss_dssp             HT-CCCCSSC
T ss_pred             CC-CCCCCCC
Confidence            87 7888774

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.9e-14  Score=86.24  Aligned_cols=53  Identities=19%  Similarity=0.473  Sum_probs=27.9

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHhhcCC---CCCccCCCCcccccCchHHHHHH
Q psy4683          51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHAT---QGLFSCDLCSYTSTQKYYLVKHK  104 (196)
Q Consensus        51 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~  104 (196)
                      +++++|.|..|++.|.....|..|+ ..|.+   +++|.|..|++.|.....|..|+
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHH-HHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHH-HHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence            4445555555555555555555555 33432   45555555555555555555555

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=3.7e-17  Score=96.81  Aligned_cols=69  Identities=16%  Similarity=0.260  Sum_probs=63.5

Q ss_pred             chHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683          97 KYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus        97 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      ...|..|++.|.++++|.|..|++.|...+.|..       +++|.|+.|++.|...+.|..|+++|++ +++|+|+
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~-~~~~~C~   71 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESG-KKTSGPS   71 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCC-CCCSSCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcC-CCCCCCC
Confidence            3567788999999999999999999999988876       7899999999999999999999999999 8999996

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.3e-14  Score=85.82  Aligned_cols=42  Identities=24%  Similarity=0.456  Sum_probs=15.8

Q ss_pred             CcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhh
Q psy4683          90 CSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVH  131 (196)
Q Consensus        90 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  131 (196)
                      |++.|.....|..|++.|.++++|.|..|++.|...+.|..|
T Consensus        27 C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   68 (73)
T 1f2i_G           27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH   68 (73)
T ss_dssp             BCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHH
Confidence            333333333333333333333333333333333333333333

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.4e-14  Score=82.21  Aligned_cols=54  Identities=26%  Similarity=0.631  Sum_probs=30.7

Q ss_pred             cccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHH-HHhhc
Q psy4683         112 NVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHK-KIHLA  165 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~  165 (196)
                      +|.|..|++.|.....|..|++.|++++||.|+.|++.|.+...|..|+ ++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            4555555555555555555555555555566666666666666666664 34443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.47  E-value=3.4e-13  Score=83.68  Aligned_cols=63  Identities=21%  Similarity=0.227  Sum_probs=51.0

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcCCCCC--------ccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHATQGL--------FSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      ..++|..|++.|.....|..|++..|.+.++        |.|..|++.|.....|..|++.|+++++|.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3578999999999999999999444988887        77777777777777777777777777777764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.2e-14  Score=84.79  Aligned_cols=59  Identities=27%  Similarity=0.439  Sum_probs=52.5

Q ss_pred             hhcCCCccccc--ccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhh
Q psy4683         106 RHIKDYNVFCK--ICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       106 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      .+.++++|.|+  .|++.|.....|..|++.|+++++|.|++|++.|.....|.+|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            46678889997  599999999999999999999999999999999999999999998874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.2e-13  Score=78.40  Aligned_cols=54  Identities=28%  Similarity=0.688  Sum_probs=33.9

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHH-HhhcC
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHK-SRHIK  109 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~  109 (196)
                      ||.|..|++.|.....|..|+ ..|.+++||.|+.|++.|.....|..|+ +.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHH-HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            466666666666666666666 4466666666666666666666666664 34543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=5e-14  Score=81.60  Aligned_cols=55  Identities=20%  Similarity=0.337  Sum_probs=37.4

Q ss_pred             CCCcccccccccccCCchHHHhhhhhhcCCCCccCc-ccccccCCchhHHHHHHHhhc
Q psy4683         109 KDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCS-VCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       109 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +.++|.|..|++.|. .+.|..|+++ ++++||.|+ .|++.|...+.|..|+++|..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            455666666666666 6666677666 666677777 677777777777777766655

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.5e-13  Score=77.50  Aligned_cols=59  Identities=17%  Similarity=0.335  Sum_probs=43.5

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC-CCcccccCchHHHHHHHhhcCCCc
Q psy4683          51 TSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD-LCSYTSTQKYYLVKHKSRHIKDYN  112 (196)
Q Consensus        51 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  112 (196)
                      -+.++|.|..|++.|. ...|..|+ .. .+++||.|+ .|++.|.....|..|++.|.+.++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~-~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQ-YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHH-HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHH-HH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3456778888888888 77888887 44 677788887 788888777788888777765543

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.2e-13  Score=71.41  Aligned_cols=42  Identities=21%  Similarity=0.470  Sum_probs=37.5

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|...+.|.+|+++|++ ++||+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV-KSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC-CSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            56778889999999999999999999999999998 8999986

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.34  E-value=3.3e-13  Score=74.87  Aligned_cols=52  Identities=15%  Similarity=0.249  Sum_probs=46.5

Q ss_pred             ccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccc
Q psy4683         119 QLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQ  171 (196)
Q Consensus       119 ~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  171 (196)
                      ++.|.....|..|+++|++++||.|..|++.|...+.|..|+++|++ ++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF-AKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT-TSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc-CCCCC
Confidence            35678888899999999999999999999999999999999999999 88874

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.34  E-value=2.3e-13  Score=71.34  Aligned_cols=42  Identities=24%  Similarity=0.435  Sum_probs=35.3

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAG-ESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCC-CCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCC-CCCCCCC
Confidence            56677888888888888888888888888888888 8888885

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.33  E-value=3.7e-13  Score=72.03  Aligned_cols=43  Identities=23%  Similarity=0.429  Sum_probs=38.4

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT-SCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            477888899999999999999999999999999998 8999986

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.9e-13  Score=71.21  Aligned_cols=43  Identities=23%  Similarity=0.448  Sum_probs=38.8

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG-ESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT-SSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC-CCCCCCC
Confidence            477888999999999999999999999999999998 8999985

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.33  E-value=4.5e-13  Score=71.71  Aligned_cols=43  Identities=19%  Similarity=0.408  Sum_probs=31.7

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      +|+++|++++||.|.+|++.|...+.|.+|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS-CCCSSCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCC-CCCCCCC
Confidence            466667777777777777777777777777777777 6777775

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4e-13  Score=71.16  Aligned_cols=43  Identities=19%  Similarity=0.444  Sum_probs=38.6

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      +|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR-KSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC-CCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC-CCCCCCC
Confidence            477888899999999999999999999999999998 8999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.2e-13  Score=71.82  Aligned_cols=43  Identities=26%  Similarity=0.423  Sum_probs=38.4

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      +|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG-ERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC-CCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCC-CCCCCCC
Confidence            477888899999999999999999999999999998 8999986

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.4e-13  Score=71.73  Aligned_cols=43  Identities=26%  Similarity=0.471  Sum_probs=37.8

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC-CCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            477788889999999999999999999999999988 8899886

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=4.9e-13  Score=71.56  Aligned_cols=43  Identities=21%  Similarity=0.374  Sum_probs=37.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG-EKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS-SSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            477888889999999999999999999999999988 8899986

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.2e-13  Score=71.83  Aligned_cols=43  Identities=21%  Similarity=0.339  Sum_probs=32.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR-EKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS-TTSSCCS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC-CCCCCCC
Confidence            466777777778888888888887788888777777 7777775

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.4e-13  Score=71.72  Aligned_cols=43  Identities=19%  Similarity=0.364  Sum_probs=37.8

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG-EKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC-CSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC-CCCCCCC
Confidence            477788889999999999999999999999999988 8899886

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.7e-13  Score=72.02  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=37.6

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      +|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ-ETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS-CCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            477788888999999999999999999999999988 8889886

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.3e-13  Score=71.39  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=33.0

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC-CSCCSCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCC
Confidence            466777777778888888888888888888877777 7777775

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.5e-13  Score=71.34  Aligned_cols=43  Identities=26%  Similarity=0.424  Sum_probs=31.5

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK-QKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC-CCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC-CCCCCCC
Confidence            466667777777777777777777777777777777 6777775

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.4e-13  Score=71.39  Aligned_cols=43  Identities=28%  Similarity=0.527  Sum_probs=33.1

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC-SSCSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC-CCCCCCC
Confidence            466777777788888888888888888888877777 7777775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.8e-13  Score=71.22  Aligned_cols=43  Identities=21%  Similarity=0.459  Sum_probs=38.3

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS-CCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC-CCCCCCC
Confidence            477888899999999999999999999999999998 8999986

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.7e-13  Score=71.27  Aligned_cols=43  Identities=23%  Similarity=0.506  Sum_probs=30.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|.+|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC-CCTTSSS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            356667777777777777777777777777777777 6777775

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.31  E-value=7.8e-13  Score=70.75  Aligned_cols=42  Identities=21%  Similarity=0.415  Sum_probs=31.3

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|...+.|.+|+++|++ ++||+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC-CSSCSCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            56667777777777777777777777777777777 7777775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7e-13  Score=70.94  Aligned_cols=43  Identities=23%  Similarity=0.420  Sum_probs=37.8

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS-SCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            467788889999999999999999999999999988 8899886

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.7e-13  Score=71.28  Aligned_cols=43  Identities=21%  Similarity=0.383  Sum_probs=31.3

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT-SCCSCSS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC-CCCCCCC
Confidence            356667777777777777777777777777777777 6777775

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.3e-13  Score=71.11  Aligned_cols=43  Identities=23%  Similarity=0.493  Sum_probs=37.7

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|.+|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG-ERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS-CCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            367788888999999999999999999999999988 8899986

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7e-13  Score=70.22  Aligned_cols=42  Identities=24%  Similarity=0.437  Sum_probs=29.3

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|..|++.|...+.|..|+++|++ ++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE-EKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTS-SCSCSCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            45566667777777777777777777777777776 6777764

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.9e-13  Score=70.97  Aligned_cols=43  Identities=19%  Similarity=0.373  Sum_probs=39.3

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|.....|..|+++|++ +++|+|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR-EKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH-TTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            477888999999999999999999999999999999 8999996

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.6e-13  Score=71.01  Aligned_cols=43  Identities=16%  Similarity=0.175  Sum_probs=39.5

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|.....|..|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER-TDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH-SCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            477889999999999999999999999999999999 8999996

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=6.1e-13  Score=71.17  Aligned_cols=43  Identities=23%  Similarity=0.456  Sum_probs=30.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS-SSCSSCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC-CCCCCCC
Confidence            356667777777777777777777777777777777 6777774

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.1e-13  Score=70.90  Aligned_cols=43  Identities=21%  Similarity=0.458  Sum_probs=29.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA-EKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC-CCSSSCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCC-CCCCCCC
Confidence            355666677777777777777777777777777776 6777764

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.3e-13  Score=70.85  Aligned_cols=43  Identities=26%  Similarity=0.417  Sum_probs=31.3

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG-YRPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC-CCSSCSS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC-CCCCCCC
Confidence            356667777777777777777777777777777777 6777775

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.7e-13  Score=71.60  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=14.7

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      |.+++||.|+.|++.|.....|..|++.|.++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.5e-13  Score=71.68  Aligned_cols=43  Identities=21%  Similarity=0.449  Sum_probs=36.3

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT-SSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC-CCCCCCC
Confidence            467778888888888888888888888888888888 8888886

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.9e-13  Score=71.92  Aligned_cols=43  Identities=28%  Similarity=0.492  Sum_probs=31.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      +|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT-SCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCC
Confidence            466677777777777777777777777777777777 7777775

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.7e-13  Score=71.27  Aligned_cols=43  Identities=19%  Similarity=0.456  Sum_probs=31.3

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG-GKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS-CCCSCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC-CCCCCCC
Confidence            356667777777777777777777777777777777 6777775

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.30  E-value=4.1e-12  Score=70.36  Aligned_cols=48  Identities=13%  Similarity=0.378  Sum_probs=35.8

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccC
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQ   96 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~   96 (196)
                      .+.++++|.|..|++.|.....|.+|++..|.+++||.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            455667788888888888888888887436777788888888877754

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5e-13  Score=71.50  Aligned_cols=43  Identities=26%  Similarity=0.452  Sum_probs=35.5

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG-ENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS-SCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.8e-13  Score=71.98  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=35.6

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC-CCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.4e-13  Score=71.72  Aligned_cols=39  Identities=28%  Similarity=0.551  Sum_probs=15.5

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      ++|++++||.|.+|++.|...+.|..|+++|++ ++||+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG-KKPSGP   43 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS-CCCSCS
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC-CCCCCC
Confidence            333333344444444444444444444443333 333333

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.9e-13  Score=71.52  Aligned_cols=31  Identities=29%  Similarity=0.701  Sum_probs=11.6

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |++++||.|.+|++.|...+.|..|+++|++
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTG   37 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGSC
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcCC
Confidence            3333333333333333333333333333333

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.9e-13  Score=71.52  Aligned_cols=43  Identities=26%  Similarity=0.465  Sum_probs=37.0

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS-SSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467788888889999999999999999999888888 8888886

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4e-13  Score=71.14  Aligned_cols=43  Identities=21%  Similarity=0.373  Sum_probs=36.6

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG-ESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC-SSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC-CCCCCCC
Confidence            467788888888888899888888888888888888 8888885

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.2e-13  Score=71.46  Aligned_cols=43  Identities=21%  Similarity=0.373  Sum_probs=35.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS-SCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            467778888888888888888888888888888888 8888885

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.4e-13  Score=69.62  Aligned_cols=41  Identities=22%  Similarity=0.329  Sum_probs=36.9

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      |+++|++++||.|..|++.|...+.|..|+++|++ ++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS-CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC-CCCCCC
Confidence            66788889999999999999999999999999998 899987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.29  E-value=5.3e-13  Score=71.40  Aligned_cols=41  Identities=22%  Similarity=0.429  Sum_probs=18.1

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG-EKPSGP   43 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC-CCCCSS
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC-CCCCCC
Confidence            33344444444444444444444444444444444 444444

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.8e-13  Score=71.27  Aligned_cols=43  Identities=23%  Similarity=0.341  Sum_probs=37.6

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR-KSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC-CCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467788888999999999999999999999999988 8899885

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.5e-13  Score=71.71  Aligned_cols=43  Identities=19%  Similarity=0.424  Sum_probs=33.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC-CCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            466777778888888888888888888888888877 7888875

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.29  E-value=4.5e-13  Score=71.69  Aligned_cols=31  Identities=23%  Similarity=0.346  Sum_probs=11.1

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhcCCCcc
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (196)
                      +||.|+.|++.|.....|..|++.|.++++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS   41 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGGSSSCCCS
T ss_pred             CceECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3333333333333333333333333333333

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5e-13  Score=71.49  Aligned_cols=43  Identities=23%  Similarity=0.419  Sum_probs=35.6

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG-EKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS-CCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.2e-13  Score=71.45  Aligned_cols=43  Identities=33%  Similarity=0.538  Sum_probs=35.3

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG-ERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC-CCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.9e-13  Score=71.54  Aligned_cols=43  Identities=21%  Similarity=0.454  Sum_probs=36.1

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC-SCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.6e-13  Score=71.05  Aligned_cols=31  Identities=26%  Similarity=0.364  Sum_probs=11.1

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhcCCCcc
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (196)
                      +||.|+.|++.|.....|..|++.|.++++|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPS   41 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGGTSCSSCS
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            3333333333333333333333333333333

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=70.07  Aligned_cols=42  Identities=21%  Similarity=0.392  Sum_probs=31.6

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|...+.|.+|+++|++ ++||+|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG-QRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS-CCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC-CCCCCCC
Confidence            56667777777777777777777777777777777 7777775

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.1e-13  Score=70.66  Aligned_cols=43  Identities=23%  Similarity=0.438  Sum_probs=30.5

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD-DKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS-CCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            356666777777777777777777777777777776 6777764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.2e-13  Score=71.44  Aligned_cols=43  Identities=19%  Similarity=0.441  Sum_probs=34.8

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT-CCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            466777888888888888888888888888888887 7888885

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=70.23  Aligned_cols=43  Identities=21%  Similarity=0.407  Sum_probs=34.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC-CCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            366777888888888888888888888888888888 7888885

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.7e-13  Score=70.56  Aligned_cols=36  Identities=14%  Similarity=0.271  Sum_probs=13.5

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      .+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A            8 SVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             CCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            333333333333333333333333333333333333

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.5e-13  Score=71.03  Aligned_cols=31  Identities=29%  Similarity=0.559  Sum_probs=11.7

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |++++||.|++|++.|...+.|..|+++|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTG   37 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGGCC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhcCC
Confidence            3333333333333333333333333333333

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.6e-13  Score=70.92  Aligned_cols=43  Identities=23%  Similarity=0.433  Sum_probs=36.8

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ +++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG-QSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS-SCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            477788888888998899999988889999888888 8888885

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.2e-13  Score=71.43  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=35.5

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC-SCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.29  E-value=9.9e-13  Score=68.86  Aligned_cols=41  Identities=17%  Similarity=0.277  Sum_probs=36.7

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ-SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC-CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC-CCCCCC
Confidence            56778889999999999999999999999999998 899987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.5e-13  Score=71.04  Aligned_cols=32  Identities=28%  Similarity=0.640  Sum_probs=12.4

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +|++++||.|++|++.|...+.|.+|+++|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG   37 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCC
Confidence            33333333333333333333333333333333

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6e-13  Score=71.18  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=18.8

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG-EKPSGP   43 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS-CCSCCS
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCC
Confidence            33444444444444444444444444444444444 444444

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.3e-13  Score=71.41  Aligned_cols=38  Identities=16%  Similarity=0.217  Sum_probs=14.5

Q ss_pred             hcCCCcccccccccccCCchHHHhhhhhhcCCCCccCc
Q psy4683         107 HIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCS  144 (196)
Q Consensus       107 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~  144 (196)
                      |.++++|.|..|++.|...+.|..|+++|++++||.|+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=5.1e-13  Score=71.49  Aligned_cols=31  Identities=29%  Similarity=0.622  Sum_probs=11.9

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |++++||.|.+|++.|...+.|..|+++|++
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTG   37 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCC
Confidence            3333333333333333333333333333333

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.28  E-value=5.5e-12  Score=74.07  Aligned_cols=58  Identities=21%  Similarity=0.449  Sum_probs=44.7

Q ss_pred             CCCCCCcccccc--cccccCCHHHHHHHHHhhcCCCCCccCCC--CcccccCchHHHHHHHhh
Q psy4683          49 NVTSDTKFPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCDL--CSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        49 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  107 (196)
                      .....++|.|..  |++.|.....|..|+ ..|.+++||.|.+  |++.|.....|..|++.|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHH-HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHH-HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            344556788877  888888888888888 6688888888864  888888888888887654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.7e-13  Score=71.28  Aligned_cols=39  Identities=23%  Similarity=0.454  Sum_probs=16.2

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      ++|++++||.|..|++.|...+.|..|+++|++ ++||+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C   43 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG-EKPSGP   43 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC-CCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCC
Confidence            333444444444444444444444444444443 344443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.5e-13  Score=71.31  Aligned_cols=43  Identities=28%  Similarity=0.489  Sum_probs=35.9

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|.....|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS-CCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.2e-13  Score=71.42  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=23.1

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      ..|.+++||.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            345555555555555555555555555555555555555544

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5e-13  Score=71.49  Aligned_cols=43  Identities=23%  Similarity=0.481  Sum_probs=34.0

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS-CCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC-CCCcCCC
Confidence            466777778888888888888888888888888877 7888875

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.8e-13  Score=70.52  Aligned_cols=38  Identities=24%  Similarity=0.493  Sum_probs=15.1

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      +|++++||.|.+|++.|.....|.+|+++|++ ++||+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG-EKPSGP   43 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT-CCCCSS
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCC-CCCCCC
Confidence            33333344444444444444444444443333 333333

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.5e-12  Score=68.94  Aligned_cols=42  Identities=19%  Similarity=0.367  Sum_probs=37.8

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAG-ESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT-SCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCC-CCCCCCC
Confidence            66778889999999999999999999999999998 8999985

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.6e-13  Score=70.38  Aligned_cols=38  Identities=26%  Similarity=0.421  Sum_probs=15.2

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      +|++++||.|.+|++.|...+.|.+|+++|++ ++||+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG-EKPSGP   43 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC-SCSSCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCC-CCCCCC
Confidence            33333444444444444444444444444333 333433

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.8e-12  Score=69.31  Aligned_cols=42  Identities=19%  Similarity=0.298  Sum_probs=18.4

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      ..++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            3344444444444444444444444444 33444444444433

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2e-12  Score=69.07  Aligned_cols=39  Identities=21%  Similarity=0.334  Sum_probs=15.4

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCC
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDL   89 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   89 (196)
                      ++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            33333344444444444444444443 2333333444433

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=9.1e-13  Score=70.46  Aligned_cols=29  Identities=31%  Similarity=0.657  Sum_probs=10.7

Q ss_pred             cCCCCccCcccccccCCchhHHHHHHHhh
Q psy4683         136 HCAQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       136 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ++++||.|++|++.|...+.|..|+++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em7_A            8 TGEKPYKCEECGKGFICRRDLYTHHMVHT   36 (46)
T ss_dssp             SCCCSEECSSSCCEESCHHHHHHHGGGGT
T ss_pred             CCCcCccCCCccchhCCHHHHHHHHHHhC
Confidence            33333333333333333333333333333

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.28  E-value=1.8e-12  Score=69.29  Aligned_cols=41  Identities=15%  Similarity=0.269  Sum_probs=17.5

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCC
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDL   89 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   89 (196)
                      ..++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCC
Confidence            3344444444444444444444444444 3344444444443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.9e-13  Score=70.50  Aligned_cols=42  Identities=21%  Similarity=0.411  Sum_probs=29.0

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|.
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG-EKPSGPS   44 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS-CCCSSSC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC-CCCCCCC
Confidence            55666667777777777777777777777777766 6677664

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=9.2e-13  Score=70.43  Aligned_cols=29  Identities=28%  Similarity=0.528  Sum_probs=10.5

Q ss_pred             cCCCCccCcccccccCCchhHHHHHHHhh
Q psy4683         136 HCAQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       136 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ++++||.|.+|++.|...+.|..|+++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em9_A            8 TGEKPYNCKECGKSFRWASCLLKHQRVHS   36 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHGGGGT
T ss_pred             CCCcCeECCccccccCChHHHHHHHHHhC
Confidence            33333333333333333333333333333

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.27  E-value=2.6e-12  Score=68.63  Aligned_cols=39  Identities=15%  Similarity=0.125  Sum_probs=16.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKI  117 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  117 (196)
                      |.+++||.|+.|++.|.....|..|++.|.++++|.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            444444444444444444444444444444444444433

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=6.2e-13  Score=70.44  Aligned_cols=43  Identities=26%  Similarity=0.399  Sum_probs=35.8

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA-KSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC-CCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCC
Confidence            467778888888888888888888888888888888 8888884

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.7e-13  Score=70.80  Aligned_cols=42  Identities=24%  Similarity=0.426  Sum_probs=33.7

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|.....|.+|+++|++ ++||+|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG-ERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS-CCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC-CCCCCCC
Confidence            56677788888888888888888888888888887 7888875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1.5e-12  Score=69.65  Aligned_cols=42  Identities=21%  Similarity=0.445  Sum_probs=30.0

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG-QKNSGPS   44 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC-CSCCCTT
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            56666777777777777777777777777777776 6777764

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=6.8e-13  Score=70.95  Aligned_cols=39  Identities=23%  Similarity=0.455  Sum_probs=16.0

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      ++|++++||.|..|++.|...+.|..|+++|++ ++||+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMG-EKCSGP   43 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC-SCSSCC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC-CCCCCC
Confidence            333444444444444444444444444444443 344443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.6e-13  Score=70.57  Aligned_cols=41  Identities=22%  Similarity=0.375  Sum_probs=31.8

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      |+++|++++||.|+.|++.|...+.|..|+++|++ ++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC-CSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCC-CCCCCC
Confidence            56677777788888888888888888888877777 777776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.6e-12  Score=69.48  Aligned_cols=38  Identities=18%  Similarity=0.298  Sum_probs=14.6

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.3e-12  Score=68.18  Aligned_cols=36  Identities=22%  Similarity=0.397  Sum_probs=13.6

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      .+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (44)
T 2emx_A            6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP   41 (44)
T ss_dssp             SSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSC
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            333333333333333333333333333333333333

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.5e-13  Score=70.57  Aligned_cols=31  Identities=32%  Similarity=0.567  Sum_probs=11.6

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |++++||.|++|++.|...+.|..|+++|++
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG   37 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSCS
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhCC
Confidence            3333333333333333333333333333333

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=7.1e-13  Score=69.47  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=34.3

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      |+++|++++||.|.+|++.|...+.|..|+++|++ ++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG-SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC-CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC-CCCCCC
Confidence            56677888888888888888888888888888888 788887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=69.16  Aligned_cols=38  Identities=13%  Similarity=0.292  Sum_probs=14.7

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2ytk_A            7 GSGEKPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSCSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCC
T ss_pred             CCCCCCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCC
Confidence            33333344444444444444444443 233333333333

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=6.7e-13  Score=70.97  Aligned_cols=43  Identities=26%  Similarity=0.422  Sum_probs=35.4

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|..|++.|...+.|..|+++|++ ++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG-KKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC-CCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            467778888888888888888888888888888888 7888885

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=69.25  Aligned_cols=42  Identities=17%  Similarity=0.348  Sum_probs=31.3

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|.....|..|+++|++ ++||+|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG-EKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC-CCCCCSC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC-CCCCCCC
Confidence            55667777777777777777777777777777777 7777775

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2e-12  Score=69.06  Aligned_cols=42  Identities=19%  Similarity=0.283  Sum_probs=18.6

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      ..++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3344444444444444444444444444 33444444444433

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=69.30  Aligned_cols=26  Identities=15%  Similarity=0.466  Sum_probs=10.1

Q ss_pred             CCCCCcccccccccccCCHHHHHHHH
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ++++++|.|+.|++.|.....|..|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHL   32 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHH
Confidence            33333333333333333333333333

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.1e-12  Score=68.99  Aligned_cols=40  Identities=15%  Similarity=0.354  Sum_probs=17.1

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCC
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDL   89 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   89 (196)
                      .++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            334444444444444444444444444 3344444444443

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.26  E-value=9.5e-12  Score=66.40  Aligned_cols=44  Identities=14%  Similarity=0.308  Sum_probs=22.3

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            334444455555555555555555555555 34555555555444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.1e-12  Score=70.16  Aligned_cols=42  Identities=24%  Similarity=0.521  Sum_probs=33.6

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |+++|++++||.|.+|++.|.....|..|+++|++ ++||+|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC-SCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            56677788888888888888888888888888887 7888875

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.25  E-value=9.4e-12  Score=66.38  Aligned_cols=45  Identities=18%  Similarity=0.251  Sum_probs=41.8

Q ss_pred             CCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          45 DDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        45 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      .+...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4677889999999999999999999999999 77999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1e-11  Score=66.22  Aligned_cols=45  Identities=16%  Similarity=0.214  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          73 KHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        73 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      +|+ ..|.+++||.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSG-SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCc-ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            467 679999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=4.4e-12  Score=70.21  Aligned_cols=45  Identities=16%  Similarity=0.204  Sum_probs=25.2

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHH-hhcCCCcccccccccccC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKS-RHIKDYNVFCKICQLGFL  123 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~  123 (196)
                      |.+++||.|..|++.|.....|..|++ .|.++++|.|..|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            444555555555555555555555554 555555555555555554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-11  Score=66.03  Aligned_cols=45  Identities=13%  Similarity=0.237  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          45 DDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        45 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      .+...++++++|.|+.|++.|.....|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            4667889999999999999999999999999 77999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=69.33  Aligned_cols=43  Identities=21%  Similarity=0.341  Sum_probs=37.4

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .|+++|++++||.|.+|++.|...+.|..|+++|++ ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG-VSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS-CSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC-CCCCCCC
Confidence            477788888999999999999999999999999988 8888875

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=68.15  Aligned_cols=38  Identities=11%  Similarity=0.091  Sum_probs=15.4

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|.
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            33334444444444444444444444444444444433

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.25  E-value=1.5e-12  Score=69.57  Aligned_cols=31  Identities=32%  Similarity=0.604  Sum_probs=11.8

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |++++||.|.+|++.|.....|..|+++|++
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR   37 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            3333333333333333333333333333333

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.25  E-value=6e-12  Score=73.91  Aligned_cols=55  Identities=22%  Similarity=0.346  Sum_probs=29.3

Q ss_pred             CCCCCccCCC--CcccccCchHHHHHHHhhcCCCcccccc--cccccCCchHHHhhhhh
Q psy4683          80 ATQGLFSCDL--CSYTSTQKYYLVKHKSRHIKDYNVFCKI--CQLGFLSKNELNVHNIK  134 (196)
Q Consensus        80 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  134 (196)
                      ...++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            3445555555  5555555555555555555555555533  55555555555555443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1e-11  Score=66.24  Aligned_cols=44  Identities=14%  Similarity=0.210  Sum_probs=24.8

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344555555555655666665555555555 44555555555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-11  Score=66.01  Aligned_cols=44  Identities=14%  Similarity=0.255  Sum_probs=27.0

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444555566666666666666666666666 45666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.2e-11  Score=65.96  Aligned_cols=44  Identities=14%  Similarity=0.332  Sum_probs=25.4

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            344555555666666666666666666665 44555566666554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.24  E-value=1.2e-11  Score=65.97  Aligned_cols=45  Identities=13%  Similarity=0.131  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          73 KHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        73 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      +|+ ..|.+++||.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSG-SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCc-CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            466 679999999999999999999999999999999999999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.8e-12  Score=66.34  Aligned_cols=44  Identities=20%  Similarity=0.333  Sum_probs=24.4

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            344455555555555555555555555555 44555555555554

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=69.62  Aligned_cols=42  Identities=12%  Similarity=0.072  Sum_probs=25.0

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      ..|.+++||.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            345555666666666666666666666666666666665554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.1e-11  Score=66.13  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=41.6

Q ss_pred             CCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          45 DDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        45 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      .+...++++++|.|+.|++.|.....|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4677888999999999999999999999999 77999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1e-11  Score=66.25  Aligned_cols=44  Identities=14%  Similarity=0.271  Sum_probs=26.6

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            444555566666666666666666666666 45666666666555

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.3e-11  Score=65.78  Aligned_cols=45  Identities=16%  Similarity=0.119  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          73 KHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        73 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      +|+ ..|.+++||.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSG-SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCC-CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCC-CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467 679999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.3e-11  Score=65.81  Aligned_cols=43  Identities=16%  Similarity=0.335  Sum_probs=22.4

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      ...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34444555555555555555555555555 34555555555544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.9e-12  Score=67.92  Aligned_cols=42  Identities=19%  Similarity=0.339  Sum_probs=18.6

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      ..++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            3344444444444444444444444444 33444444444443

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.3e-11  Score=65.82  Aligned_cols=45  Identities=11%  Similarity=0.085  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          73 KHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        73 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      +|+ ..|.+++||.|..|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSG-SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCC-CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCc-cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467 679999999999999999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.3e-11  Score=65.87  Aligned_cols=44  Identities=14%  Similarity=0.255  Sum_probs=27.6

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            445556666666666666666666666666 45666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-11  Score=65.50  Aligned_cols=44  Identities=14%  Similarity=0.249  Sum_probs=25.9

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|.+|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            344555556666666666666666666666 44556666666554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.4e-11  Score=65.77  Aligned_cols=44  Identities=11%  Similarity=0.257  Sum_probs=24.2

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            344455555555555555555555555555 44555555555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1e-11  Score=66.21  Aligned_cols=44  Identities=14%  Similarity=0.177  Sum_probs=22.6

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            334444555555555555555555555555 34555555555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-11  Score=65.61  Aligned_cols=44  Identities=18%  Similarity=0.344  Sum_probs=24.5

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344455555555555555555555555555 44555555555554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-11  Score=65.51  Aligned_cols=45  Identities=9%  Similarity=0.242  Sum_probs=41.4

Q ss_pred             CCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          45 DDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        45 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      .+.+.++++++|.|..|++.|.....|..|+ ..|.+++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3567888999999999999999999999999 68999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=1.3e-11  Score=65.83  Aligned_cols=44  Identities=18%  Similarity=0.330  Sum_probs=24.7

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            344455555555666666665555565555 44555555555554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-11  Score=65.64  Aligned_cols=44  Identities=20%  Similarity=0.303  Sum_probs=23.1

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            334445555555555555555555555555 34555555555544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.4e-11  Score=65.65  Aligned_cols=45  Identities=13%  Similarity=0.171  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          73 KHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        73 ~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      +|+ ..|.+++||.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSG-SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSS-CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCC-cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466 679999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.4e-11  Score=65.74  Aligned_cols=44  Identities=16%  Similarity=0.267  Sum_probs=25.7

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344555555666666666666666666665 44556666666554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.7e-11  Score=65.40  Aligned_cols=44  Identities=14%  Similarity=0.217  Sum_probs=26.2

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344555556666666666666666666666 45666666666554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-11  Score=65.37  Aligned_cols=44  Identities=11%  Similarity=0.286  Sum_probs=23.8

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            344455555555555555555555555555 44555555555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-11  Score=65.75  Aligned_cols=43  Identities=19%  Similarity=0.226  Sum_probs=21.3

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      ...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34444444555555555555555555555 34445555555444

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.8e-11  Score=65.25  Aligned_cols=44  Identities=16%  Similarity=0.246  Sum_probs=24.5

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344455555555555555555555555555 44555555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-11  Score=65.38  Aligned_cols=44  Identities=16%  Similarity=0.324  Sum_probs=25.3

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            344555555566666666666666666665 44555566666554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.6e-11  Score=65.50  Aligned_cols=44  Identities=11%  Similarity=0.193  Sum_probs=26.3

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            344555556666666666666666666666 45666666666554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=1.8e-11  Score=65.33  Aligned_cols=44  Identities=14%  Similarity=0.219  Sum_probs=26.1

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +.+.++++++|.|+.|++.|.....|..|+ ..|.+++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            344555556666666666666666666665 45666666666554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.1e-11  Score=66.12  Aligned_cols=44  Identities=14%  Similarity=0.316  Sum_probs=25.1

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            344455555566666666666666666665 44555556665554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.21  E-value=1.9e-11  Score=65.20  Aligned_cols=44  Identities=16%  Similarity=0.262  Sum_probs=25.0

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            344455555566666666666666666665 44555555655554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.5e-12  Score=67.36  Aligned_cols=41  Identities=27%  Similarity=0.544  Sum_probs=35.4

Q ss_pred             hhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         132 NIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       132 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      ++.|++++||.|.+|++.|.....|..|+++|++ ++||+|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS-CCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCC-CCCCCCC
Confidence            4567888899999999999999999999999988 8889885

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.1e-11  Score=65.01  Aligned_cols=44  Identities=11%  Similarity=0.083  Sum_probs=41.4

Q ss_pred             HHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccccc
Q psy4683          74 HERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKIC  118 (196)
Q Consensus        74 H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  118 (196)
                      |+ ..|.+++||.|..|++.|.....|..|++.|.++++|.|..|
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SG-SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CS-SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CC-CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56 679999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.8e-11  Score=65.32  Aligned_cols=44  Identities=16%  Similarity=0.292  Sum_probs=28.4

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            445556666666666666666666666666 55666666666655

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-11  Score=64.95  Aligned_cols=45  Identities=16%  Similarity=0.178  Sum_probs=26.7

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +.+.++++++|.|..|++.|.....|..|++..|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            444555566666666666666666666666215666666666555

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.9e-12  Score=66.98  Aligned_cols=42  Identities=14%  Similarity=0.121  Sum_probs=25.8

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHH-hhcCCCccccccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKS-RHIKDYNVFCKIC  118 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  118 (196)
                      ..|.+++||.|..|++.|.....|..|++ .|.++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            44556666666666666666666666666 6666666666554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.7e-11  Score=65.33  Aligned_cols=44  Identities=14%  Similarity=0.299  Sum_probs=24.7

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQ-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHH-HHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHH-HHcCCCCCCCCCCC
Confidence            344455555555666666665555565555 44555555555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.3e-11  Score=64.86  Aligned_cols=43  Identities=16%  Similarity=0.132  Sum_probs=22.8

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      ...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34445555555555555555555555555 34555555555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.20  E-value=3e-13  Score=77.24  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=20.8

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCc
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSK  125 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  125 (196)
                      .|.+++||.|+.|++.|.....|.   +.|.++++|.|..|++.|...
T Consensus         8 ~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            8 DSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             HcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            344445555555555554444333   344444444444444444433

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.20  E-value=9.6e-12  Score=65.41  Aligned_cols=40  Identities=15%  Similarity=0.229  Sum_probs=33.2

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      +.|++++||.|..|++.|...+.|..|+++|++ ++||+|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHS-DKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC-TTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCC-CCCccCC
Confidence            356778888888888888888888888888888 8888885

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.6e-11  Score=64.64  Aligned_cols=43  Identities=16%  Similarity=0.293  Sum_probs=24.2

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDL   89 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   89 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQ-KIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHH-TTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            344555555555666666665555565555 4455555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.5e-12  Score=66.39  Aligned_cols=39  Identities=15%  Similarity=0.320  Sum_probs=15.9

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      .++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSS
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            333334444444444444444444444 233444444443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=2.9e-11  Score=65.14  Aligned_cols=43  Identities=16%  Similarity=0.344  Sum_probs=32.8

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcc
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSY   92 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~   92 (196)
                      .+.++++|.|..|++.|.....|..|+ ..|.+++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            345566788888888888888888888 6677788888888874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.5e-11  Score=65.24  Aligned_cols=40  Identities=18%  Similarity=0.346  Sum_probs=18.5

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      |+++++|.|..|++.|.....|..|+ ..|.++++|.|+.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~c   44 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKSGPSS   44 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHH-HHHSCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHH-HHccCCCCCCCcCC
Confidence            33444444444444444444444444 33444444444444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.18  E-value=6e-12  Score=65.78  Aligned_cols=38  Identities=16%  Similarity=0.331  Sum_probs=21.6

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      .|.+++||.|+.|++.|.....|..|++.|.++++|.|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45555555555555555555555555555555555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=1.2e-11  Score=66.67  Aligned_cols=40  Identities=20%  Similarity=0.309  Sum_probs=18.5

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccc
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQ  119 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  119 (196)
                      .++++|.|.+|++.|.....|..|++.|.++++|.|.+|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3344444444444444444444444444444444444443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=3.3e-11  Score=63.94  Aligned_cols=43  Identities=14%  Similarity=0.173  Sum_probs=40.7

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQ  119 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  119 (196)
                      ..|.+++||.|..|++.|.....|..|++.|.++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3588999999999999999999999999999999999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4e-12  Score=67.57  Aligned_cols=41  Identities=29%  Similarity=0.538  Sum_probs=31.7

Q ss_pred             hhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC
Q psy4683         132 NIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       132 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      .++|++++||.|.+|++.|.....|..|+++|++ ++||+|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG-EKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS-CCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCC-CCCCCCC
Confidence            4556777788888888888888888888888877 7788775

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=6.8e-12  Score=65.24  Aligned_cols=39  Identities=26%  Similarity=0.359  Sum_probs=31.0

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      ++|++++||.|++|++.|.....|..|+++|++ ++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTG-SGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCC-CSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCC-CCCcCC
Confidence            356777888888888888888888888888887 788877

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.15  E-value=1.6e-11  Score=65.54  Aligned_cols=37  Identities=16%  Similarity=0.186  Sum_probs=14.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            3333344444444444444444444444433333333

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8e-12  Score=66.68  Aligned_cols=35  Identities=17%  Similarity=0.225  Sum_probs=13.1

Q ss_pred             CCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          81 TQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        81 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      +++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            33333333333333333333333333333333333

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.14  E-value=7.9e-12  Score=69.17  Aligned_cols=49  Identities=22%  Similarity=0.252  Sum_probs=25.1

Q ss_pred             cccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCc
Q psy4683          93 TSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPH  141 (196)
Q Consensus        93 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  141 (196)
                      .|.....|..|++.|.++++|.|..|++.|...+.|..|+++|++++||
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            3444444455555555555555555555555555555555555555444

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.8e-11  Score=63.23  Aligned_cols=44  Identities=14%  Similarity=0.267  Sum_probs=40.2

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      .+..++++++|.|..|++.|.....|..|+ ..|.+++||.|.+|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            356788889999999999999999999999 77999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.3e-11  Score=64.83  Aligned_cols=37  Identities=16%  Similarity=0.284  Sum_probs=14.7

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      .+++||.|..|++.|.....|..|++.|.++++|.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            8 EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3333344444444444434444443333333333333

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.2e-11  Score=64.97  Aligned_cols=37  Identities=19%  Similarity=0.201  Sum_probs=14.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3333344444444444444444444444443333333

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.6e-11  Score=64.65  Aligned_cols=37  Identities=30%  Similarity=0.316  Sum_probs=16.4

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            4444444444444444444444444444444444444

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.5e-11  Score=62.75  Aligned_cols=36  Identities=22%  Similarity=0.328  Sum_probs=14.9

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVF  114 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  114 (196)
                      |.+++||.|+.|++.|.....|..|++.|.++++|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            333444444444444444444444444444444433

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.3e-11  Score=64.25  Aligned_cols=37  Identities=22%  Similarity=0.191  Sum_probs=16.7

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4444444444444444444444444444444444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2e-11  Score=65.08  Aligned_cols=37  Identities=14%  Similarity=0.202  Sum_probs=15.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            3444444444444444444444444444444444444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.2e-11  Score=65.36  Aligned_cols=39  Identities=18%  Similarity=0.266  Sum_probs=22.5

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      ..|.+++||.|+.|++.|.....|..|++.|.++++|.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            345555556665566555555555555555555555555

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.12  E-value=1.6e-11  Score=69.98  Aligned_cols=54  Identities=24%  Similarity=0.461  Sum_probs=46.7

Q ss_pred             CCCCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHH
Q psy4683          43 KLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYL  100 (196)
Q Consensus        43 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l  100 (196)
                      |..+...|++++||.|+.||+.|.....|.    ..|.+++||.|+.|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCccc
Confidence            456788899999999999999999888876    469999999999999999866543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.1e-11  Score=63.49  Aligned_cols=44  Identities=11%  Similarity=0.208  Sum_probs=40.0

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      .++.+.++++|.|..|++.|.....|..|+ ..|.+++||.|++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            356678889999999999999999999999 67999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=64.67  Aligned_cols=40  Identities=15%  Similarity=0.203  Sum_probs=21.4

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      ..|.+++||.|..|++.|.....|..|++.|.++++|.|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3455555555555555555555555555555555555553

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.8e-11  Score=64.55  Aligned_cols=37  Identities=19%  Similarity=0.209  Sum_probs=15.1

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            3334444444444444444444444444444444433

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=64.88  Aligned_cols=26  Identities=19%  Similarity=0.535  Sum_probs=10.2

Q ss_pred             CCCCCcccccccccccCCHHHHHHHH
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ++++++|.|..|++.|.....|..|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHL   32 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHH
Confidence            33333333433444443333333333

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3e-11  Score=63.75  Aligned_cols=37  Identities=30%  Similarity=0.510  Sum_probs=16.2

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|+.|++.|.....|..|++.|.++++|.|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4444444444444444444444444444444444433

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.4e-10  Score=61.71  Aligned_cols=41  Identities=20%  Similarity=0.334  Sum_probs=20.3

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSSS
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            34444444555555555555555555555 344455555543

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=65.00  Aligned_cols=40  Identities=15%  Similarity=0.259  Sum_probs=24.0

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcCCCccccc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCK  116 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  116 (196)
                      ..|.+++||.|..|++.|.....|..|++.|.++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3455566666666666666666666666666666666554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.2e-10  Score=62.06  Aligned_cols=42  Identities=17%  Similarity=0.318  Sum_probs=24.0

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            344555555566666666666666666665 445555555554

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.3e-10  Score=61.77  Aligned_cols=41  Identities=15%  Similarity=0.349  Sum_probs=20.9

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            34444455555555555555555555555 345555555553

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.3e-10  Score=61.81  Aligned_cols=41  Identities=15%  Similarity=0.292  Sum_probs=20.9

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCS
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCC
Confidence            34444455555555555555555555555 345555555553

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.4e-10  Score=61.77  Aligned_cols=42  Identities=14%  Similarity=0.373  Sum_probs=21.9

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...+.++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            334445555555555555555555555555 445555555553

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.5e-12  Score=76.23  Aligned_cols=63  Identities=21%  Similarity=0.316  Sum_probs=38.3

Q ss_pred             HHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         100 LVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       100 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |..|++.+.+.+++.|..|++.|. ...|..|+ .+.+++|+.|+.|++.|. ...|..|+++|++
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            444555555666666666666663 55666666 566666666666666655 3666666666655

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.7e-11  Score=65.43  Aligned_cols=30  Identities=33%  Similarity=0.605  Sum_probs=11.8

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHh
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      +|++++||.|..|++.|...+.|..|+++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIH   35 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTC
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHc
Confidence            333333344444444444333444443333

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.2e-10  Score=61.95  Aligned_cols=41  Identities=15%  Similarity=0.340  Sum_probs=20.7

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHH-HHHCCCSCSCTT
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHH-HHcCCCCCCCCC
Confidence            34444455555555555555555555555 345555555553

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-10  Score=61.44  Aligned_cols=42  Identities=21%  Similarity=0.302  Sum_probs=22.3

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            334445555555555555555555555555 445555555553

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.5e-10  Score=61.57  Aligned_cols=41  Identities=15%  Similarity=0.302  Sum_probs=20.6

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTT
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCC
Confidence            34444445555555555555555555555 345555555553

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.8e-10  Score=61.29  Aligned_cols=41  Identities=15%  Similarity=0.368  Sum_probs=20.3

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yth_A            4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSCC
T ss_pred             ccCCCCCcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            33444444555555555555555555554 344455555543

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.5e-10  Score=61.53  Aligned_cols=42  Identities=17%  Similarity=0.328  Sum_probs=23.6

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCC
Confidence            344455555556666666666555666665 445555555554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.4e-10  Score=61.65  Aligned_cols=41  Identities=22%  Similarity=0.474  Sum_probs=20.0

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQ-KTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHH-HHHCCCCCCCSC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            33444444555555555555555555555 334444555443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-10  Score=61.42  Aligned_cols=42  Identities=17%  Similarity=0.300  Sum_probs=22.0

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQ-RIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHH-GGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHH-hHhCCCCCCCCC
Confidence            334445555555555555555555555555 345555555553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-10  Score=61.49  Aligned_cols=42  Identities=14%  Similarity=0.300  Sum_probs=21.9

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            334445555555555555555555555555 345555555553

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-10  Score=61.53  Aligned_cols=41  Identities=22%  Similarity=0.404  Sum_probs=21.2

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHH-HTSCSSSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            34444555555555555555555555555 345555555553

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.5e-11  Score=62.37  Aligned_cols=35  Identities=14%  Similarity=0.239  Sum_probs=14.0

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (196)
                      |.+++||.|+.|++.|.....|..|++.|.++++|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            33333444444444444444444444444333333

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.7e-10  Score=61.36  Aligned_cols=42  Identities=17%  Similarity=0.347  Sum_probs=24.0

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            344555555566666666666666666665 445555555554

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=64.39  Aligned_cols=38  Identities=16%  Similarity=0.357  Sum_probs=18.7

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      .|.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444455555555555555555555555544444444

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=4.5e-12  Score=77.41  Aligned_cols=61  Identities=15%  Similarity=0.149  Sum_probs=46.7

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccCceeccCCchhhhhhhHhhhh
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCDTYFYEGNSLAWEDTSLEITL  193 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~~~f~~~~~l~~H~~~~h~~~  193 (196)
                      +.++|++++||.|..|++.|.....|..|+++|++ ++||+|. .+.....|..|.+.+.+.+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~-~~~~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE-EFQKRAK-RQERRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHH-HHHHHCC-CCSCCCCCCCCCCCCCCSS
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC-CCCcccc-hhhhHHHHHhhhccccccc
Confidence            34567888888888888888888888888888888 7888885 3556777777777665543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.8e-10  Score=61.28  Aligned_cols=41  Identities=15%  Similarity=0.358  Sum_probs=22.8

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +..++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCC
Confidence            34455555555555555555555555555 445555555554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.07  E-value=5.9e-11  Score=61.86  Aligned_cols=35  Identities=17%  Similarity=0.226  Sum_probs=14.0

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (196)
                      |.+++||.|+.|++.|.....|..|++.|.++++|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~   40 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS   40 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC
Confidence            33333444444444444444444444444333333

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.9e-10  Score=60.51  Aligned_cols=40  Identities=23%  Similarity=0.433  Sum_probs=20.7

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSC   87 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   87 (196)
                      ...++++++|.|+.|++.|.....|..|+ ..|.+++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQ-RTHTGESGPSS   43 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHH-HHTTTSSCSCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHH-HHhCCCCCCCC
Confidence            34444555555555555555555555555 34555555554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=62.46  Aligned_cols=35  Identities=17%  Similarity=0.185  Sum_probs=14.1

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS   40 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC
Confidence            33334444444444444444444444444333333

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.9e-11  Score=63.91  Aligned_cols=38  Identities=18%  Similarity=0.204  Sum_probs=20.0

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      .|.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44555555555555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.9e-10  Score=60.50  Aligned_cols=40  Identities=20%  Similarity=0.303  Sum_probs=20.2

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSC   87 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   87 (196)
                      ...++++++|.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSS   43 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCC
Confidence            34444445555555555555555555555 34555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=9.2e-11  Score=61.83  Aligned_cols=37  Identities=16%  Similarity=0.261  Sum_probs=16.3

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      |.+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3444444444444444444444444444444444443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.06  E-value=1.5e-10  Score=60.66  Aligned_cols=36  Identities=19%  Similarity=0.322  Sum_probs=14.4

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCCCcccc
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFC  115 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  115 (196)
                      .+++||.|..|++.|.....|..|++.|.++++|.|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            6 SGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            333344444444444444444444444443333333

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.9e-10  Score=59.83  Aligned_cols=40  Identities=20%  Similarity=0.364  Sum_probs=20.8

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSC   87 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   87 (196)
                      ...++++++|.|+.|++.|.....|..|+ ..|.+++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSCCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             ccccCCCCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            34444555555555555555555555555 44555555544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.4e-10  Score=60.75  Aligned_cols=42  Identities=14%  Similarity=0.333  Sum_probs=24.8

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      +...++++++|.|+.|++.|.....|..|+ ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            444555556666666666666666666666 455566666654

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=3e-10  Score=59.76  Aligned_cols=41  Identities=20%  Similarity=0.430  Sum_probs=23.1

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccC
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSC   87 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   87 (196)
                      +...++++++|.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQ-KTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHG-GGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCC
Confidence            344455555555655666665555555555 44555555555

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.6e-10  Score=60.64  Aligned_cols=41  Identities=17%  Similarity=0.315  Sum_probs=21.0

Q ss_pred             CCCCCCCCcccccccccccCCHHHHHHHHHhhcCC-CCCccCC
Q psy4683          47 EDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHAT-QGLFSCD   88 (196)
Q Consensus        47 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~C~   88 (196)
                      ...+.++++|.|..|++.|.....|..|+ ..|.+ ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            34444455555555555555555555555 44555 5555553

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.8e-11  Score=63.81  Aligned_cols=19  Identities=26%  Similarity=0.546  Sum_probs=7.0

Q ss_pred             cccccCCchhHHHHHHHhh
Q psy4683         146 CKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       146 C~~~f~~~~~l~~H~~~h~  164 (196)
                      |++.|.....|..|+++|+
T Consensus        20 C~k~f~~~~~L~~H~~~H~   38 (48)
T 2ent_A           20 CGWRFSRSDELSRHRRSHS   38 (48)
T ss_dssp             CCCEESSHHHHHHHHTTSC
T ss_pred             CCCccCCHHHHHHHHHHhC
Confidence            3333333333333333333

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.3e-10  Score=60.29  Aligned_cols=43  Identities=16%  Similarity=0.313  Sum_probs=29.0

Q ss_pred             CCCCCCCCccccc--ccccccCCHHHHHHHHHhhcCCCCCccCCCC
Q psy4683          47 EDNVTSDTKFPCR--LCSQEFDTKEQRKKHERKDHATQGLFSCDLC   90 (196)
Q Consensus        47 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   90 (196)
                      .+.++++++|.|.  .|++.|.....|..|+ ..|.+++||.|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4455666677776  6777777777777777 55667777777665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=61.47  Aligned_cols=36  Identities=25%  Similarity=0.333  Sum_probs=14.2

Q ss_pred             CCCCCcccccccccccCCHHHHHHHHHhhcCCCCCcc
Q psy4683          50 VTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFS   86 (196)
Q Consensus        50 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~   86 (196)
                      ++++++|.|..|++.|.....|..|+ ..|.+++||.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~   42 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPS   42 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHH-hHhcCCCCCC
Confidence            33333444444444444444444443 2333333333

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.00  E-value=1.4e-10  Score=59.42  Aligned_cols=37  Identities=30%  Similarity=0.459  Sum_probs=28.1

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhccCCcccc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQC  172 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C  172 (196)
                      |++++||.|..|++.|...+.|..|+++|++ ++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR-DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC-SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC-Ccccee
Confidence            3567778888888888888888888888887 777765

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.6e-10  Score=59.37  Aligned_cols=40  Identities=20%  Similarity=0.367  Sum_probs=25.9

Q ss_pred             CCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCC
Q psy4683          48 DNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCD   88 (196)
Q Consensus        48 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   88 (196)
                      ..++++++|.|..|++.|.....|..|+ ..|.+++||.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCC
Confidence            4455566666666666666666666666 556666666664

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=8.3e-12  Score=76.21  Aligned_cols=56  Identities=13%  Similarity=0.197  Sum_probs=32.0

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHHhhhhhhcC
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELNVHNIKQHC  137 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  137 (196)
                      +|.+++||.|..|++.|.....|..|++.|.++++|.|..|.    ....|..|++.+.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            355566666666666666666666666666666666665443    23344455555554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=6.4e-10  Score=59.11  Aligned_cols=38  Identities=13%  Similarity=0.162  Sum_probs=18.4

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccC
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSC   87 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   87 (196)
                      .+.++++|.|..|++.|.....|..|+ ..|.+++||.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCC
Confidence            334444455555555555555555554 33444445544

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=6.4e-10  Score=57.51  Aligned_cols=38  Identities=24%  Similarity=0.437  Sum_probs=21.0

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccC
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSC   87 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   87 (196)
                      .++++++|.|+.|++.|.....|..|+ ..|.+++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            344455555555555555555555555 44555555554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=3.3e-10  Score=64.52  Aligned_cols=38  Identities=24%  Similarity=0.320  Sum_probs=32.5

Q ss_pred             hcCCCCccCcc--cccccCCchhHHHHH-HHhhccCCccccC
Q psy4683         135 QHCAQPHTCSV--CKKIFVNKKNLTTHK-KIHLALDRNYQCD  173 (196)
Q Consensus       135 ~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~C~  173 (196)
                      .++++||.|..  |+++|...+.|.+|+ ++|++ ++||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg-EKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS-DLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS-CCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC-CCCcccc
Confidence            46789999965  999999999999997 67988 8999887

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.6e-10  Score=57.59  Aligned_cols=36  Identities=19%  Similarity=0.441  Sum_probs=29.9

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhccCCc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRN  169 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  169 (196)
                      ++|++++||.|..|++.|...+.|..|+++|++ ++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~-~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP-EVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS-SCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC-CCC
Confidence            457788889999999999999999999888887 554

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=8.9e-11  Score=69.45  Aligned_cols=66  Identities=18%  Similarity=0.185  Sum_probs=39.4

Q ss_pred             cCCCCCCCCCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          41 SDKLDDEDNVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        41 ~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      ..+..|...+.+.+++.|..|++.|. ...|..|. . |.+.+|+.|+.|++.|. ...|..|+..|.+.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~-~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-D-YCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-H-HHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-h-HcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            34555666666666666666666663 66666665 2 55566666666666554 35666666655543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.92  E-value=2.9e-10  Score=57.39  Aligned_cols=35  Identities=23%  Similarity=0.508  Sum_probs=30.0

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |+++|++++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            66778888888898899999888888888888876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.89  E-value=1e-09  Score=53.94  Aligned_cols=32  Identities=22%  Similarity=0.415  Sum_probs=27.1

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhccCCccc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQ  171 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  171 (196)
                      +||.|.+|++.|...+.|..|+++|++ +++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL-LGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT-TCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC-CCCCC
Confidence            478888888888888888888888888 78775

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.89  E-value=8.2e-10  Score=54.90  Aligned_cols=34  Identities=21%  Similarity=0.350  Sum_probs=28.4

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhccCCc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRN  169 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  169 (196)
                      |++++||.|..|++.|...+.|..|+++|++ ++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHG-AAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSC-TTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcC-CCC
Confidence            5678888999999999998999999888887 554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.86  E-value=1.7e-09  Score=55.23  Aligned_cols=21  Identities=24%  Similarity=0.702  Sum_probs=8.5

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      +|.|..|++.|.....|..|+
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~   26 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHM   26 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             ceECCCCCcccCCHHHHHHHH
Confidence            344444444444444444443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=3.4e-09  Score=60.39  Aligned_cols=42  Identities=12%  Similarity=0.132  Sum_probs=30.7

Q ss_pred             CCCCCCCcccccc--cccccCCHHHHHHHHHhhcCCCCCccCCC
Q psy4683          48 DNVTSDTKFPCRL--CSQEFDTKEQRKKHERKDHATQGLFSCDL   89 (196)
Q Consensus        48 ~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   89 (196)
                      ...++++||.|..  |++.|....+|.+|++++|++++||.|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3456677888864  88888888888888645688888887754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.85  E-value=9.1e-10  Score=54.77  Aligned_cols=34  Identities=26%  Similarity=0.550  Sum_probs=26.3

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhccCCc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRN  169 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  169 (196)
                      |++++||.|..|++.|...+.|..|+++|++ ++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD-TLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS-CCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCC-CCC
Confidence            5677788888888888888888888888877 543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.4e-09  Score=54.29  Aligned_cols=32  Identities=25%  Similarity=0.371  Sum_probs=27.8

Q ss_pred             hhcCCCCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .+++++||.|+.  |++.|...+.|.+|+++|++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            356788999986  99999999999999999987

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=3.2e-09  Score=53.79  Aligned_cols=35  Identities=26%  Similarity=0.519  Sum_probs=29.8

Q ss_pred             hcCCCCccCc--ccccccCCchhHHHHHHHhhccCCcc
Q psy4683         135 QHCAQPHTCS--VCKKIFVNKKNLTTHKKIHLALDRNY  170 (196)
Q Consensus       135 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  170 (196)
                      |++++||.|.  .|++.|...+.|.+|+++|++ +++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM-TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT-TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC-CCCC
Confidence            4678889998  599999999999999999988 7776

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3.4e-09  Score=53.33  Aligned_cols=33  Identities=18%  Similarity=0.372  Sum_probs=28.7

Q ss_pred             hhhcCCCCccCcccccccCCc-hhHHHHHHHhhc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNK-KNLTTHKKIHLA  165 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~  165 (196)
                      ++|++++||.|+.|++.|... +.|..|+++|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            356788899999999999998 899999999887

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.9e-09  Score=52.34  Aligned_cols=32  Identities=25%  Similarity=0.427  Sum_probs=27.8

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.+++||.|..|++.|.....|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            46778889999999999999999999998887

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.74  E-value=7.4e-09  Score=51.26  Aligned_cols=32  Identities=16%  Similarity=0.192  Sum_probs=15.4

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      |.+++||.|..|++.|.....|..|++.|.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            33444455555555555445555554444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=4.3e-09  Score=52.62  Aligned_cols=32  Identities=28%  Similarity=0.520  Sum_probs=27.5

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.+++||.|.+|++.|...+.|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            46778889999999999999999999888876

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.73  E-value=8e-09  Score=51.19  Aligned_cols=31  Identities=23%  Similarity=0.375  Sum_probs=14.3

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      .+++||.|..|++.|.....|..|++.|.++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            3444444444444444444444444444433

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=7.5e-09  Score=51.99  Aligned_cols=32  Identities=13%  Similarity=0.348  Sum_probs=15.6

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      |.+++||.|..|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            44444455555555554444555554444443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.72  E-value=7.5e-09  Score=51.99  Aligned_cols=31  Identities=23%  Similarity=0.421  Sum_probs=16.1

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhc
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      .|.+++||.|+.|++.|.....|..|++.|.
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            3445555555555555555555555555444

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=8.2e-09  Score=51.49  Aligned_cols=32  Identities=34%  Similarity=0.649  Sum_probs=27.3

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.++++|.|.+|++.|.....|..|+++|++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            35678889999999999999999999988887

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.71  E-value=3.7e-09  Score=56.38  Aligned_cols=38  Identities=24%  Similarity=0.398  Sum_probs=32.8

Q ss_pred             HHhhhhhhcCCCCccCc--ccccccCCchhHHHHHHHhhc
Q psy4683         128 LNVHNIKQHCAQPHTCS--VCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       128 l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +..|...|++++||.|.  .|++.|...+.|..|+++|++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            44556678999999995  799999999999999999987

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=3.3e-09  Score=53.46  Aligned_cols=33  Identities=21%  Similarity=0.271  Sum_probs=27.8

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHH-HHHhhc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTH-KKIHLA  165 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  165 (196)
                      ++|++++||.|..|++.|...+.|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            457788889999999999999999999 888876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=4.1e-09  Score=52.68  Aligned_cols=32  Identities=19%  Similarity=0.376  Sum_probs=25.8

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|++++||.|..|++.|...+.|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            35677888888888888888888888888876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.68  E-value=1.9e-08  Score=49.25  Aligned_cols=28  Identities=25%  Similarity=0.268  Sum_probs=11.5

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcCCCc
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIKDYN  112 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  112 (196)
                      |.|+.|++.|.....|..|++.|.++++
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            3444444444444444444444443333

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.68  E-value=6e-09  Score=52.06  Aligned_cols=25  Identities=20%  Similarity=0.372  Sum_probs=17.1

Q ss_pred             cCCCCccCcccccccCCchhHHHHH
Q psy4683         136 HCAQPHTCSVCKKIFVNKKNLTTHK  160 (196)
Q Consensus       136 ~~~~~~~C~~C~~~f~~~~~l~~H~  160 (196)
                      .+++||.|..|+++|...+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566777777777777777777766

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.2e-08  Score=50.88  Aligned_cols=32  Identities=31%  Similarity=0.589  Sum_probs=27.1

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .+.+++||.|+.|++.|.....|..|+++|++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            35677889999999999999999999988887

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=2.8e-08  Score=49.44  Aligned_cols=31  Identities=29%  Similarity=0.480  Sum_probs=15.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      |.+++||.|..|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            4444555555555555555555555555443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.8e-08  Score=49.51  Aligned_cols=31  Identities=32%  Similarity=0.622  Sum_probs=14.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      |.+++||.|..|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            3444444455555544444444444444443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=3.6e-08  Score=49.89  Aligned_cols=30  Identities=30%  Similarity=0.606  Sum_probs=14.1

Q ss_pred             CCCCCccCCC--CcccccCchHHHHHHHhhcC
Q psy4683          80 ATQGLFSCDL--CSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        80 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  109 (196)
                      .+++||.|+.  |++.|.....|..|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            3444444443  44444444444444444443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.60  E-value=1.1e-08  Score=54.75  Aligned_cols=32  Identities=31%  Similarity=0.622  Sum_probs=25.4

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHH-Hhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKK-IHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~  165 (196)
                      +|++++||.|.+|++.|.....|..|++ +|++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            3667888888888888888888888888 7776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.59  E-value=3.1e-08  Score=49.77  Aligned_cols=31  Identities=23%  Similarity=0.553  Sum_probs=26.7

Q ss_pred             hcCCCCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +++++||.|.+  |++.|...+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            56788899984  99999999999999999887

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=3.2e-08  Score=49.63  Aligned_cols=32  Identities=16%  Similarity=0.256  Sum_probs=18.5

Q ss_pred             cCCCCCccCCCCcccccCc-hHHHHHHHhhcCC
Q psy4683          79 HATQGLFSCDLCSYTSTQK-YYLVKHKSRHIKD  110 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  110 (196)
                      |.+++||.|+.|++.|... ..|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            4555566666666666655 5666666555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=5.4e-08  Score=48.35  Aligned_cols=31  Identities=26%  Similarity=0.341  Sum_probs=15.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      |.++++|.|..|++.|.....|..|++.|.+
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            3444555555555555555555555555543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=3.8e-08  Score=49.63  Aligned_cols=32  Identities=25%  Similarity=0.344  Sum_probs=14.2

Q ss_pred             CCCCccCC--CCcccccCchHHHHHHHhhcCCCc
Q psy4683          81 TQGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYN  112 (196)
Q Consensus        81 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  112 (196)
                      +++||.|.  .|++.|.....|..|++.|.++++
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            34444444  244444444444444444444433

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3.4e-08  Score=49.17  Aligned_cols=27  Identities=19%  Similarity=0.383  Sum_probs=11.3

Q ss_pred             CCCCccCCCCcccccCchHHHHHHHhh
Q psy4683          81 TQGLFSCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        81 ~~~~~~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      +++||.|..|++.|.....|..|++.|
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            334444444444444444444444443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.55  E-value=1.3e-09  Score=53.19  Aligned_cols=30  Identities=23%  Similarity=0.456  Sum_probs=20.2

Q ss_pred             CccCcccccccCCchhHHHHHHHhhccCCcc
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHLALDRNY  170 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  170 (196)
                      ||.|..|++.|...+.|..|+++|++ ++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFI-VVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSS-SSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHcc-CCCC
Confidence            56677777777766677777666666 5655

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.55  E-value=5e-08  Score=48.65  Aligned_cols=25  Identities=20%  Similarity=0.506  Sum_probs=14.8

Q ss_pred             CCCCcccccccccccCCHHHHHHHH
Q psy4683          51 TSDTKFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        51 ~~~~~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      .+++||.|+.|++.|...++|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4455566666666666666666664

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6.5e-08  Score=48.12  Aligned_cols=30  Identities=23%  Similarity=0.442  Sum_probs=14.3

Q ss_pred             CCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          80 ATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        80 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      .+++||.|+.|++.|.....|..|++.|.+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            344444444444444444444444444443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.53  E-value=6.5e-08  Score=45.75  Aligned_cols=27  Identities=26%  Similarity=0.413  Sum_probs=23.3

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            468888999999998899999888887

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.53  E-value=5.8e-08  Score=45.62  Aligned_cols=27  Identities=26%  Similarity=0.677  Sum_probs=22.8

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            478888888888888888888888876

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.53  E-value=6.5e-08  Score=45.34  Aligned_cols=27  Identities=44%  Similarity=0.785  Sum_probs=23.5

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|+.|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            478899999999999999999988887

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=6e-08  Score=45.53  Aligned_cols=27  Identities=37%  Similarity=0.680  Sum_probs=23.4

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            478899999999999999999988887

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.51  E-value=4e-08  Score=46.24  Aligned_cols=27  Identities=30%  Similarity=0.535  Sum_probs=21.8

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|+.|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            467888888888888888888888876

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=4.1e-08  Score=46.48  Aligned_cols=28  Identities=21%  Similarity=0.491  Sum_probs=22.4

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++||.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3578888888888888888888888776

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.50  E-value=4.9e-08  Score=45.20  Aligned_cols=27  Identities=26%  Similarity=0.530  Sum_probs=21.9

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhh
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            367888888888888888888888774

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.48  E-value=6.4e-08  Score=51.71  Aligned_cols=32  Identities=19%  Similarity=0.454  Sum_probs=16.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHH-hhcCC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKS-RHIKD  110 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  110 (196)
                      |.+++||.|..|++.|.....|..|++ .|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            445555555555555555555555555 55443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=9.7e-08  Score=54.53  Aligned_cols=31  Identities=26%  Similarity=0.471  Sum_probs=25.7

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +.+++||.|.+|++.|...+.|.+|+++|++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            5567888888888888888888888888887

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=7e-08  Score=48.41  Aligned_cols=30  Identities=30%  Similarity=0.621  Sum_probs=13.9

Q ss_pred             cCCCCCccCCCCcccccCchHHHHH-HHhhc
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKH-KSRHI  108 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~  108 (196)
                      |.+++||.|..|++.|.....|..| ++.|.
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            4444444444444444444444444 44443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=3.7e-08  Score=46.01  Aligned_cols=28  Identities=39%  Similarity=0.757  Sum_probs=20.9

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++||.|..|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3577788888888888888888777653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.46  E-value=9.9e-08  Score=47.82  Aligned_cols=31  Identities=16%  Similarity=0.253  Sum_probs=16.0

Q ss_pred             cCCCCCccCCC--CcccccCchHHHHHHHhhcC
Q psy4683          79 HATQGLFSCDL--CSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        79 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  109 (196)
                      |.+++||.|.+  |++.|.....|..|++.|.+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            44455555542  55555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=2.5e-08  Score=47.05  Aligned_cols=27  Identities=30%  Similarity=0.683  Sum_probs=22.4

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            468888888888888888888888876

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=3.7e-08  Score=45.70  Aligned_cols=25  Identities=20%  Similarity=0.493  Sum_probs=19.0

Q ss_pred             CCccCcccccccCCchhHHHHHHHh
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5777777777777777777777765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=1.1e-07  Score=45.86  Aligned_cols=28  Identities=39%  Similarity=0.758  Sum_probs=22.1

Q ss_pred             CCCccCc--ccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCS--VCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++||.|.  .|++.|...+.|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            3578887  788888888888888888876

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3e-08  Score=47.04  Aligned_cols=27  Identities=30%  Similarity=0.688  Sum_probs=22.5

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..|++.|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            578888888888888888888888876

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.40  E-value=1.4e-08  Score=49.31  Aligned_cols=24  Identities=25%  Similarity=0.427  Sum_probs=8.9

Q ss_pred             ccCCCCcccccCchHHHHHHHhhc
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      |.|..|++.|.....|..|++.|.
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHc
Confidence            333333333333333333333333

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.40  E-value=9.6e-08  Score=45.73  Aligned_cols=27  Identities=33%  Similarity=0.748  Sum_probs=21.3

Q ss_pred             CCccCc--ccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCS--VCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|.  .|++.|...+.|..|+++|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            467786  788888888888888888776

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.37  E-value=3.6e-07  Score=42.70  Aligned_cols=25  Identities=24%  Similarity=0.554  Sum_probs=11.3

Q ss_pred             CccCCCCcccccCchHHHHHHHhhc
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      ||.|+.|++.|.....|..|++.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhc
Confidence            3444444444444444444444443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.36  E-value=2.5e-07  Score=43.30  Aligned_cols=25  Identities=24%  Similarity=0.289  Sum_probs=11.4

Q ss_pred             CccCCCCcccccCchHHHHHHHhhc
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      ||.|+.|++.|.....|..|++.|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhc
Confidence            3444444444444444444444443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=7.8e-08  Score=51.09  Aligned_cols=33  Identities=24%  Similarity=0.505  Sum_probs=19.8

Q ss_pred             hcCCCCCccCC--CCcccccCchHHHHHHHhhcCC
Q psy4683          78 DHATQGLFSCD--LCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        78 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      .|.+++||.|.  .|++.|.....|..|++.|.++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            45566666663  4666666666666666666543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.6e-08  Score=44.55  Aligned_cols=26  Identities=35%  Similarity=0.658  Sum_probs=20.6

Q ss_pred             CCccCcccccccCCchhHHHHHHHhh
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      +||.|..|++.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46888888888888888888887763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=3e-07  Score=43.31  Aligned_cols=21  Identities=19%  Similarity=0.687  Sum_probs=9.3

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      +|.|..|++.|.....|..|+
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~   23 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHL   23 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHH
Confidence            344444444444444444444

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.34  E-value=1e-07  Score=43.91  Aligned_cols=26  Identities=31%  Similarity=0.805  Sum_probs=18.3

Q ss_pred             CccCcccccccCCchhHHHHHHHhhc
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ||.|..|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777664

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.33  E-value=5.6e-07  Score=42.32  Aligned_cols=27  Identities=19%  Similarity=0.479  Sum_probs=13.9

Q ss_pred             CccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      ||.|..|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            455555555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=4.5e-07  Score=42.29  Aligned_cols=26  Identities=27%  Similarity=0.290  Sum_probs=14.0

Q ss_pred             CccCCCCcccccCchHHHHHHHhhcC
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      ||.|+.|++.|.....|..|++.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555555555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=3.6e-07  Score=42.70  Aligned_cols=25  Identities=24%  Similarity=0.307  Sum_probs=11.1

Q ss_pred             CccCCCCcccccCchHHHHHHHhhc
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      ||.|..|++.|.....|..|++.|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHHHhc
Confidence            3444444444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.30  E-value=5.9e-07  Score=51.24  Aligned_cols=32  Identities=25%  Similarity=0.465  Sum_probs=17.1

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      +.+++||.|..|++.|.....|..|+++|+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            33445555555555555555555555555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.28  E-value=1.8e-07  Score=44.20  Aligned_cols=27  Identities=30%  Similarity=0.715  Sum_probs=19.6

Q ss_pred             CCccCcccccccCCchhHHHH-HHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTH-KKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~  165 (196)
                      +||.|..|++.|...+.|..| +++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            367777777777777777777 566665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.27  E-value=8.4e-07  Score=42.56  Aligned_cols=26  Identities=31%  Similarity=0.590  Sum_probs=12.3

Q ss_pred             CccCC--CCcccccCchHHHHHHHhhcC
Q psy4683          84 LFSCD--LCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        84 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      ||.|.  .|++.|.....|..|++.|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44444  444444444444444444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=5.3e-07  Score=41.49  Aligned_cols=21  Identities=33%  Similarity=0.564  Sum_probs=9.4

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ||.|..||+.|.....|..|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHL   23 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHH
T ss_pred             CccCCCcChhhCCHHHHHHHH
Confidence            344444444444444444444

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.24  E-value=7.5e-07  Score=42.43  Aligned_cols=19  Identities=32%  Similarity=0.447  Sum_probs=7.7

Q ss_pred             CCcccccCchHHHHHHHhh
Q psy4683          89 LCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        89 ~C~~~f~~~~~l~~H~~~h  107 (196)
                      .|++.|.....|..|++.|
T Consensus         9 ~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            9 YCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             TCCCBCSSHHHHHHHHTTT
T ss_pred             CCCcccCCHhHHHHHHHHh
Confidence            3444444444444444333

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=5.1e-07  Score=41.87  Aligned_cols=21  Identities=29%  Similarity=0.749  Sum_probs=10.2

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      +|.|..|++.|.....|..|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~   23 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHY   23 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHH
Confidence            444444444444444444444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=4.1e-07  Score=41.97  Aligned_cols=21  Identities=19%  Similarity=0.477  Sum_probs=10.9

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ||.|..|++.|...+.|..|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHM   23 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHH
T ss_pred             CcCCCCCCcccCCHHHHHHHH
Confidence            455555555555555555554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=1.6e-07  Score=44.05  Aligned_cols=23  Identities=30%  Similarity=0.547  Sum_probs=9.2

Q ss_pred             ccCCCCcccccCchHHHHHHHhh
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      |.|..|++.|.....|..|++.|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            33444444444444444443333

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.21  E-value=8.8e-07  Score=40.60  Aligned_cols=20  Identities=30%  Similarity=0.798  Sum_probs=8.5

Q ss_pred             ccccccccccCCHHHHHHHH
Q psy4683          56 FPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~   75 (196)
                      |.|..|++.|.....|..|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~   21 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQ   21 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG
T ss_pred             ccCCCCCCcCCCHHHHHHHH
Confidence            33444444444444444444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=2.1e-07  Score=43.93  Aligned_cols=23  Identities=22%  Similarity=0.358  Sum_probs=9.2

Q ss_pred             ccCCCCcccccCchHHHHHHHhh
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      |.|..|++.|.....|..|++.|
T Consensus         4 ~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            4 YVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            33444444444444444443333

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.16  E-value=1.1e-06  Score=41.31  Aligned_cols=19  Identities=26%  Similarity=0.856  Sum_probs=7.7

Q ss_pred             ccccccccccCCHHHHHHH
Q psy4683          56 FPCRLCSQEFDTKEQRKKH   74 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H   74 (196)
                      |.|..|++.|.....|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            3344444444444444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.13  E-value=5.7e-07  Score=41.98  Aligned_cols=26  Identities=35%  Similarity=0.712  Sum_probs=19.2

Q ss_pred             CccCc--ccccccCCchhHHHHHHHhhc
Q psy4683         140 PHTCS--VCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       140 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ||.|.  .|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            57777  777777777777777777653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=4.9e-07  Score=41.19  Aligned_cols=20  Identities=25%  Similarity=0.516  Sum_probs=7.8

Q ss_pred             ccCCCCcccccCchHHHHHH
Q psy4683          85 FSCDLCSYTSTQKYYLVKHK  104 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~  104 (196)
                      |.|+.|++.|.....|..|+
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHI   22 (26)
Confidence            33333333333333333333

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.87  E-value=1.9e-05  Score=44.67  Aligned_cols=46  Identities=17%  Similarity=0.317  Sum_probs=24.9

Q ss_pred             cccccCCchHHHhhhh-hhcCCC------CccCc--ccccccCCchhHHHHHHHh
Q psy4683         118 CQLGFLSKNELNVHNI-KQHCAQ------PHTCS--VCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       118 C~~~f~~~~~l~~H~~-~~~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  163 (196)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4445555555555542 333322      56665  5666666666666666654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.86  E-value=6.8e-06  Score=38.06  Aligned_cols=20  Identities=20%  Similarity=0.805  Sum_probs=9.3

Q ss_pred             cccc--ccccccCCHHHHHHHH
Q psy4683          56 FPCR--LCSQEFDTKEQRKKHE   75 (196)
Q Consensus        56 ~~C~--~C~~~f~~~~~l~~H~   75 (196)
                      |.|.  .|++.|...+.|..|+
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~   24 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHK   24 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHH
T ss_pred             CCCcCCcCcCccCCHHHHHHHH
Confidence            4444  4444444444444444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.70  E-value=7.3e-05  Score=42.18  Aligned_cols=47  Identities=21%  Similarity=0.439  Sum_probs=30.0

Q ss_pred             ccccccCCHHHHHHHHHhhcCCCC------CccCC--CCcccccCchHHHHHHHh
Q psy4683          60 LCSQEFDTKEQRKKHERKDHATQG------LFSCD--LCSYTSTQKYYLVKHKSR  106 (196)
Q Consensus        60 ~C~~~f~~~~~l~~H~~~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~  106 (196)
                      .|++.|.+...|..|+...|.+.+      +|.|.  .|++.+.....|..|++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            377777777777777755666554      56664  566666666666666554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.03  E-value=0.0002  Score=46.32  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=22.7

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHH
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      ..+...|.|..|+..|.+...|..|...
T Consensus        88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           88 DGEDRSKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             SCCCTTTEETTTTEECSSHHHHHHHHTS
T ss_pred             cCCCCCeEcCCCCCEeCCHHHHHHHHCC
Confidence            4556778899999999999988888754

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.92  E-value=0.0001  Score=47.01  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=27.2

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHh
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      ....++|++||.|..|++.|.+.+.|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            345577888999999999999999999998774

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.84  E-value=0.00032  Score=47.72  Aligned_cols=70  Identities=17%  Similarity=0.214  Sum_probs=35.6

Q ss_pred             ccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCccccC--ceeccCCchhhhhhhHh
Q psy4683         117 ICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNYQCD--TYFYEGNSLAWEDTSLE  190 (196)
Q Consensus       117 ~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~C~--~~f~~~~~l~~H~~~~h  190 (196)
                      .|+.... ...+..|.. ...-.+..|+.|+..+ .+..|..|+...-. .++-.|.  ........|..|.....
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~-~r~~~C~~C~~~~~~~~l~~H~~~~~  160 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCP-RRQVSCDNCAASMAFEDKEIHDQNCP  160 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCT-TCEEECTTTCCEEEGGGHHHHHTTCC
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCC-CCCeECCCCCCccCHHHHHhHHHhCc
Confidence            3544433 334555542 2333455666666655 45556666655444 4555555  33444555666654443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.49  E-value=0.00096  Score=42.50  Aligned_cols=31  Identities=19%  Similarity=0.315  Sum_probs=26.0

Q ss_pred             CCCCCCCCCcccccccccccCCHHHHHHHHH
Q psy4683          46 DEDNVTSDTKFPCRLCSQEFDTKEQRKKHER   76 (196)
Q Consensus        46 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   76 (196)
                      ....+++.++|.|..|++.|.+...|..|++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4566778888999999999999999998884

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.46  E-value=0.0034  Score=40.43  Aligned_cols=77  Identities=18%  Similarity=0.290  Sum_probs=48.2

Q ss_pred             CcccccccccccCCHHHHHHHHH-hhcCCC-CCccCCC------CcccccCchHHHHHHHhhcCCCcccccccccccCCc
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHER-KDHATQ-GLFSCDL------CSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSK  125 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~-~~~~C~~------C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  125 (196)
                      +++.|..|+..|.+...+..|.. ..|... +.+.+..      =++.+....    +...+.+...|.|..|+..|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            36889999999999999999983 112111 1222210      012221111    11234556778899999999999


Q ss_pred             hHHHhhhhh
Q psy4683         126 NELNVHNIK  134 (196)
Q Consensus       126 ~~l~~H~~~  134 (196)
                      ..+..|...
T Consensus       107 ~~~~~H~~g  115 (127)
T 1zu1_A          107 VVAESHYIG  115 (127)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            999988653

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.32  E-value=0.002  Score=33.10  Aligned_cols=25  Identities=20%  Similarity=0.325  Sum_probs=20.1

Q ss_pred             CCccCcccccccCCchhHHHHHHHh
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      -+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            4688888888888888888888743

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.69  E-value=0.0085  Score=30.79  Aligned_cols=21  Identities=24%  Similarity=0.520  Sum_probs=12.4

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      .|.|+.|+..|.....|+.||
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hm   32 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHM   32 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhh
Confidence            455666666666555666555

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.86  E-value=0.016  Score=39.20  Aligned_cols=104  Identities=16%  Similarity=0.223  Sum_probs=67.9

Q ss_pred             cccccccccCCHH-----HHHHHHHhhcCCCCCccCC--CCcccccCchHHHHHHHhhcCCCcccccccccccCCchHHH
Q psy4683          57 PCRLCSQEFDTKE-----QRKKHERKDHATQGLFSCD--LCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFLSKNELN  129 (196)
Q Consensus        57 ~C~~C~~~f~~~~-----~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  129 (196)
                      .|+.|...+....     .+..-+     ......|+  -|++.+. ...+..|...- .-.+..|+.|+..+ ....|.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i-----~~l~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~-~r~~l~  126 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREI-----LSLMVKCPNEGCLHKME-LRHLEDHQAHC-EFALMDCPQCQRPF-QKFHIN  126 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHH-----HTSEEECCSTTCCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEE-EGGGHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHH-----hhcccCCCCCCCCceec-HhHHHHHHhcC-CceeeECCCCChHH-HHHHHH
Confidence            6777776665421     111211     12345673  4666553 45667776432 34567899999887 567799


Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhccCCcc
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY  170 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  170 (196)
                      .|.......++-.|+.|+..+. ...|..|..++.| +.++
T Consensus       127 ~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~-~~~~  165 (170)
T 3hcs_A          127 IHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPL-ALEH  165 (170)
T ss_dssp             HHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC-----
T ss_pred             HHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcC-hhhh
Confidence            9998888888899999998774 5678999999988 5443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.53  E-value=0.022  Score=27.31  Aligned_cols=26  Identities=19%  Similarity=0.286  Sum_probs=22.2

Q ss_pred             CccCcccccccCCchhHHHHHHHhhc
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.||+|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            58899999999999999999877553

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.26  E-value=0.041  Score=26.36  Aligned_cols=27  Identities=22%  Similarity=0.447  Sum_probs=23.3

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCC
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   81 (196)
                      .|.|+.|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            489999999999999999999777754

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.81  E-value=0.036  Score=32.01  Aligned_cols=38  Identities=26%  Similarity=0.442  Sum_probs=18.2

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcCCCcccccccccccC
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIKDYNVFCKICQLGFL  123 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  123 (196)
                      |.|..||..+. +..+..|...-.+...|.|..|++.|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            45555554443 234455544433333455555555554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.76  E-value=0.06  Score=31.07  Aligned_cols=47  Identities=19%  Similarity=0.314  Sum_probs=35.9

Q ss_pred             CcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHH
Q psy4683         111 YNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTH  159 (196)
Q Consensus       111 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  159 (196)
                      ..|.|..||.++. +..+..|.....+...|.|..|++.|.. ...+.|
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            4588999998876 5678899776666668999999999985 334444

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=91.32  E-value=0.074  Score=31.41  Aligned_cols=28  Identities=21%  Similarity=0.293  Sum_probs=21.1

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhccCCcc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLALDRNY  170 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  170 (196)
                      ....|.+||+.|.   .|.+|+.+++| -.|.
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hg-ltpe   47 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHS-MTPE   47 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTC-SCHH
T ss_pred             CceEecccchhhH---HHHHHHHHccC-CCHH
Confidence            3467999999888   47799999777 5553

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=90.19  E-value=0.023  Score=32.69  Aligned_cols=14  Identities=29%  Similarity=0.622  Sum_probs=10.4

Q ss_pred             CCccCcccccccCC
Q psy4683         139 QPHTCSVCKKIFVN  152 (196)
Q Consensus       139 ~~~~C~~C~~~f~~  152 (196)
                      -.|+||.||..|--
T Consensus        50 F~FkCP~CgEEFyG   63 (95)
T 2k5c_A           50 FVFKCPVCGEEFYG   63 (95)
T ss_dssp             SEEECTTTCCEEET
T ss_pred             HhhcCCCccHHHhc
Confidence            35889999887743

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=89.89  E-value=0.26  Score=22.85  Aligned_cols=25  Identities=28%  Similarity=0.632  Sum_probs=21.8

Q ss_pred             ccccccccccCCHHHHHHHHHhhcC
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHA   80 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~   80 (196)
                      -.|..|.+.++...+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4599999999999999999977664

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=89.33  E-value=0.16  Score=26.11  Aligned_cols=11  Identities=18%  Similarity=0.763  Sum_probs=6.5

Q ss_pred             ccccccccccC
Q psy4683         113 VFCKICQLGFL  123 (196)
Q Consensus       113 ~~C~~C~~~f~  123 (196)
                      |.|..||..|.
T Consensus         5 y~C~vCGyvyd   15 (46)
T 6rxn_A            5 YVCNVCGYEYD   15 (46)
T ss_dssp             EEETTTCCEEC
T ss_pred             EECCCCCeEEe
Confidence            45666666555

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=87.93  E-value=0.21  Score=30.54  Aligned_cols=12  Identities=25%  Similarity=0.634  Sum_probs=6.5

Q ss_pred             Cccccccccccc
Q psy4683         111 YNVFCKICQLGF  122 (196)
Q Consensus       111 ~~~~C~~C~~~f  122 (196)
                      .++.|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            345555555555

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=87.76  E-value=0.27  Score=25.17  Aligned_cols=13  Identities=23%  Similarity=0.437  Sum_probs=7.4

Q ss_pred             ccccccccccCCc
Q psy4683         113 VFCKICQLGFLSK  125 (196)
Q Consensus       113 ~~C~~C~~~f~~~  125 (196)
                      |.|-.||+.|...
T Consensus         4 Y~C~rCg~~fs~~   16 (48)
T 4ayb_P            4 YRCGKCWKTFTDE   16 (48)
T ss_dssp             -CCCCTTTTCCCC
T ss_pred             EEeeccCCCccHH
Confidence            5666666666543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.36  E-value=0.79  Score=22.02  Aligned_cols=23  Identities=22%  Similarity=0.339  Sum_probs=17.7

Q ss_pred             CCcccccccccccCCHHHHHHHH
Q psy4683          53 DTKFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        53 ~~~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ..++.|..|+-.|.....+..|.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhh
Confidence            34577888888888888888886

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.62  E-value=0.66  Score=22.29  Aligned_cols=24  Identities=29%  Similarity=0.491  Sum_probs=15.6

Q ss_pred             CCccCcccccccCCchhHHHHHHH
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      .++.|..|+-+|.+...+..|.+-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            345666777777777666666654

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=85.25  E-value=0.47  Score=32.95  Aligned_cols=28  Identities=18%  Similarity=0.303  Sum_probs=24.6

Q ss_pred             CCCccCcccccccCC-chhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVN-KKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~-~~~l~~H~~~h~~  165 (196)
                      ..|..|..|+..|.+ ...|..|+..|-.
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~~  195 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEYD  195 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHHH
Confidence            568999999999987 9999999988754

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=84.37  E-value=0.29  Score=34.01  Aligned_cols=24  Identities=21%  Similarity=0.549  Sum_probs=16.0

Q ss_pred             cccccccccccCCchHHHhhhhhhcCCCCccCccccc
Q psy4683         112 NVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKK  148 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~  148 (196)
                      -|.|..||..+..             ..|+.||.|+-
T Consensus       171 ~~~C~~CG~i~~g-------------~~p~~CP~C~~  194 (202)
T 1yuz_A          171 FHLCPICGYIHKG-------------EDFEKCPICFR  194 (202)
T ss_dssp             EEECSSSCCEEES-------------SCCSBCTTTCC
T ss_pred             EEEECCCCCEEcC-------------cCCCCCCCCCC
Confidence            4678888776541             35678888774

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=82.77  E-value=0.89  Score=20.59  Aligned_cols=21  Identities=19%  Similarity=0.385  Sum_probs=17.9

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      .|.|+.|....++...++.|.
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~   23 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHV   23 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHH
Confidence            378999999999999888887

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=81.78  E-value=0.7  Score=24.42  Aligned_cols=22  Identities=14%  Similarity=0.409  Sum_probs=19.2

Q ss_pred             ccCcccccccCCchhHHHHHHH
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      -.|..|+..|..+..++.|+-+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            5899999999999999999744

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=81.65  E-value=0.84  Score=25.95  Aligned_cols=11  Identities=18%  Similarity=0.748  Sum_probs=4.9

Q ss_pred             CccCCCCcccc
Q psy4683          84 LFSCDLCSYTS   94 (196)
Q Consensus        84 ~~~C~~C~~~f   94 (196)
                      +..|..|+..+
T Consensus        44 ~v~C~~C~~~~   54 (76)
T 2yuc_A           44 RLKCEFCGCDF   54 (76)
T ss_dssp             CCCCSSSCCCC
T ss_pred             ceECCCCCCcc
Confidence            34444444444

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=81.26  E-value=0.8  Score=22.57  Aligned_cols=25  Identities=16%  Similarity=0.429  Sum_probs=17.5

Q ss_pred             CCccCcccccccCCchhHHHHHHHhh
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ..|.|+.|+..+.. ..+..|.-.|-
T Consensus         8 ~~~~C~~C~~~i~~-~~~~EH~D~H~   32 (39)
T 2i5o_A            8 DQVPCEKCGSLVPV-WDMPEHMDYHF   32 (39)
T ss_dssp             CEEECTTTCCEEEG-GGHHHHHHHHH
T ss_pred             CCcccccccCcCCc-ccccchhhHHH
Confidence            45778888888776 55677776664

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.16  E-value=0.33  Score=27.98  Aligned_cols=13  Identities=31%  Similarity=0.634  Sum_probs=9.7

Q ss_pred             CCccCcccccccC
Q psy4683         139 QPHTCSVCKKIFV  151 (196)
Q Consensus       139 ~~~~C~~C~~~f~  151 (196)
                      ..-.|..|++.+.
T Consensus        27 ~~A~Ck~C~k~ls   39 (76)
T 2djr_A           27 QYATCRLCGRQVS   39 (76)
T ss_dssp             SCEEESSSCCBCC
T ss_pred             CEEECCCCCCccC
Confidence            3467888888876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 7e-05
 Identities = 16/46 (34%), Positives = 22/46 (47%)

Query: 118 CQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH 163
           C   F  K++ + H       +P+ C VC K F  K +L  H KIH
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.2 bits (74), Expect = 0.003
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 140 PHTCSVCKKIFVNKKNLTTHKKIH 163
           P+ C  C K F     L  H+++H
Sbjct: 7   PYGCVECGKAFSRSSILVQHQRVH 30

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 140 PHTCSVCKKIFVNKKNLTTHKKIH 163
           P  C +C + F    +LTTH + H
Sbjct: 3   PFQCRICMRNFSRSDHLTTHIRTH 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.72
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.67
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.4
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.38
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.38
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.3
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.3
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.26
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.25
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.22
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.21
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.2
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.18
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.16
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.14
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.13
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.12
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.11
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.11
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.08
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.96
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.94
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.89
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.86
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.83
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.79
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.77
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.71
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.69
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.62
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.49
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.41
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.41
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.34
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.33
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.32
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.24
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.15
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.05
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.02
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.01
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.92
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.89
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.87
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.78
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.77
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.77
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.76
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.74
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.66
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.64
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.6
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.59
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.53
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.49
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.45
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.43
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.42
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.42
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.41
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.37
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.34
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.26
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.24
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.21
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.18
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.17
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.08
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.05
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.0
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.94
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.69
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.59
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.58
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.58
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.57
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.41
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.19
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.13
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.94
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.75
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.64
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	95.6
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.59
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.42
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.3
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.99
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.79
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.67
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.64
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.57
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.52
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.24
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.06
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.91
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.75
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.49
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.65
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.04
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.51
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.09
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.81
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.79
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.45
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	86.89
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.19
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.79
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	84.88
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	84.41
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	80.11

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.2e-18  Score=94.98  Aligned_cols=53  Identities=34%  Similarity=0.528  Sum_probs=39.0

Q ss_pred             CCcccccccccccCCchHHHhhhhhhcCCCCccCcccccccCCchhHHHHHHHh
Q psy4683         110 DYNVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       110 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      +++|.|. ||++|.....|..|+++|++++||.|.+||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4677773 7777777777777777777777777777777777777777777665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2e-17  Score=90.07  Aligned_cols=53  Identities=32%  Similarity=0.636  Sum_probs=36.5

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCcccccCchHHHHHHHhh
Q psy4683          53 DTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        53 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      ++||.|+ ||+.|....+|..|+ .+|++++||.|..||+.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~-~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHh-hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3567773 777777777777776 5677777777777777777777777776654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.9e-14  Score=71.70  Aligned_cols=36  Identities=22%  Similarity=0.461  Sum_probs=32.0

Q ss_pred             hhhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         130 VHNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       130 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +|+++|++++||.|.+||++|...++|..|+++|+|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            578888999999999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.9e-13  Score=67.84  Aligned_cols=37  Identities=16%  Similarity=0.532  Sum_probs=27.8

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhcCCCCCccCCC
Q psy4683          53 DTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDL   89 (196)
Q Consensus        53 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   89 (196)
                      ++||.|..||+.|...++|.+|++.+|++++||.|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4677888888888888888888755678888887753

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=6.9e-14  Score=69.51  Aligned_cols=36  Identities=31%  Similarity=0.663  Sum_probs=28.5

Q ss_pred             CCCCccCcccccccCCchhHHHHHH-HhhccCCccccC
Q psy4683         137 CAQPHTCSVCKKIFVNKKNLTTHKK-IHLALDRNYQCD  173 (196)
Q Consensus       137 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~C~  173 (196)
                      .++||.|.+||+.|...++|.+|++ +|++ ++||+|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~-ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCC-CcCcCCc
Confidence            3678888888888888888888875 5888 8888885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=9.3e-14  Score=66.36  Aligned_cols=32  Identities=25%  Similarity=0.525  Sum_probs=29.0

Q ss_pred             hhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         134 KQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       134 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +|++++||.|.+||++|...+.|..|+++|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            47899999999999999999999999999987

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=2.5e-13  Score=67.09  Aligned_cols=35  Identities=23%  Similarity=0.508  Sum_probs=31.3

Q ss_pred             hhhhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         131 HNIKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       131 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |.++|++++||.|.+|++.|...+.|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67889999999999999999999999999998864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.2e-13  Score=65.43  Aligned_cols=33  Identities=30%  Similarity=0.408  Sum_probs=30.2

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++|+|++||.|.+|+++|...+.|..|+++|++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            578999999999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=8.6e-13  Score=65.57  Aligned_cols=33  Identities=21%  Similarity=0.407  Sum_probs=16.3

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      ..|++++||.|+.||+.|...++|..|+++|+|
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            344455555555555555555555555554444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=1.3e-12  Score=59.74  Aligned_cols=28  Identities=32%  Similarity=0.732  Sum_probs=25.3

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |+||.|++|++.|...++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5799999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=4e-12  Score=60.57  Aligned_cols=31  Identities=23%  Similarity=0.455  Sum_probs=16.8

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      |++++||.|..||+.|...+.|..|+++|++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4555555555555555555555555555544

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=1.6e-12  Score=62.87  Aligned_cols=31  Identities=29%  Similarity=0.616  Sum_probs=27.6

Q ss_pred             hcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         135 QHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       135 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |+|++||.|.+|++.|...++|.+|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            6788999999999999999999999999886

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.20  E-value=3e-12  Score=59.28  Aligned_cols=29  Identities=24%  Similarity=0.692  Sum_probs=24.7

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhccCC
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLALDR  168 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  168 (196)
                      +||.|++|++.|...+.|.+|+++|+| ++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg-EK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN-EK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-SC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC-CC
Confidence            588899999999999999999999888 54

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=5.4e-12  Score=58.27  Aligned_cols=29  Identities=28%  Similarity=0.612  Sum_probs=24.9

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhccCC
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLALDR  168 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  168 (196)
                      +||.|++|++.|...+.|.+|+++|+| ++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg-eK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN-KK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC-CC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC-cC
Confidence            588999999999999999999999988 53

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=4.7e-12  Score=61.84  Aligned_cols=33  Identities=15%  Similarity=0.347  Sum_probs=28.1

Q ss_pred             hhhcCCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         133 IKQHCAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       133 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++|+|++||.|++|++.|...++|.+|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            468899999999999999999999999876554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=4.4e-12  Score=65.80  Aligned_cols=42  Identities=24%  Similarity=0.481  Sum_probs=36.1

Q ss_pred             chHHHhhhhhhcCCCCccCcc--cccccCCchhHHHHHHHhhccCC
Q psy4683         125 KNELNVHNIKQHCAQPHTCSV--CKKIFVNKKNLTTHKKIHLALDR  168 (196)
Q Consensus       125 ~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~  168 (196)
                      .+.+..|+. |++++||.|.+  |++.|...++|..|+++|+| ++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg-ek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE-DR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT-TC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccC-CC
Confidence            345667775 99999999987  99999999999999999998 54

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=9.8e-12  Score=60.52  Aligned_cols=32  Identities=41%  Similarity=0.809  Sum_probs=27.2

Q ss_pred             ccCcc--cccccCCchhHHHHHHHhhccCCccccC
Q psy4683         141 HTCSV--CKKIFVNKKNLTTHKKIHLALDRNYQCD  173 (196)
Q Consensus       141 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~C~  173 (196)
                      |.|+.  |+++|.....|.+|+++|+| ++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg-ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC-CCCEeCC
Confidence            67765  88899988899999988888 8888885

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1e-11  Score=55.29  Aligned_cols=26  Identities=35%  Similarity=0.745  Sum_probs=23.3

Q ss_pred             CCccCcccccccCCchhHHHHHHHhh
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      +||+|.+||++|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=2.2e-11  Score=59.53  Aligned_cols=32  Identities=28%  Similarity=0.387  Sum_probs=18.5

Q ss_pred             hcCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          78 DHATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        78 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      +|+|++||.|.+||+.|.....|..|++.|.+
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            35555566666666656555555555555543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=1.8e-11  Score=60.28  Aligned_cols=32  Identities=22%  Similarity=0.436  Sum_probs=18.3

Q ss_pred             hhcCCCCCccCCCCcccccCchHHHHHHHhhc
Q psy4683          77 KDHATQGLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        77 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      +.|++++||.|+.|++.|....+|..|++.|.
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            34555555555555555555555555555553

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.11  E-value=2.6e-11  Score=58.50  Aligned_cols=31  Identities=23%  Similarity=0.373  Sum_probs=17.1

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      |+|++||.|.+|++.|....+|..|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            4455555555555555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.08  E-value=4.3e-11  Score=55.29  Aligned_cols=27  Identities=22%  Similarity=0.556  Sum_probs=14.0

Q ss_pred             CccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      ||.|++|++.|.....|.+|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            455555555555555555555555544

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=7.3e-11  Score=54.38  Aligned_cols=28  Identities=25%  Similarity=0.371  Sum_probs=16.1

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3555555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=4.6e-11  Score=54.50  Aligned_cols=26  Identities=23%  Similarity=0.448  Sum_probs=12.6

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhc
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      +||.|++|++.|.....|..|+++|+
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCcc
Confidence            44444444444444444444444443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.5e-10  Score=56.37  Aligned_cols=28  Identities=21%  Similarity=0.354  Sum_probs=15.2

Q ss_pred             cCCCCCccCCCCcccccCchHHHHHHHh
Q psy4683          79 HATQGLFSCDLCSYTSTQKYYLVKHKSR  106 (196)
Q Consensus        79 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  106 (196)
                      |+|++||.|++|++.|....+|..|++.
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHccc
Confidence            5555555555555555555555555443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.7e-10  Score=53.48  Aligned_cols=27  Identities=37%  Similarity=0.837  Sum_probs=23.6

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|++  |+++|...+.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            5888887  99999999999999999987

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.1e-10  Score=53.24  Aligned_cols=27  Identities=41%  Similarity=0.738  Sum_probs=23.8

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|++  |+++|...+.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            5888977  99999999999999999987

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.7e-10  Score=50.13  Aligned_cols=24  Identities=25%  Similarity=0.461  Sum_probs=10.1

Q ss_pred             CccCCCCcccccCchHHHHHHHhh
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      ||+|.+||+.|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            344444444444444444444433

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.86  E-value=1.6e-10  Score=59.74  Aligned_cols=33  Identities=24%  Similarity=0.546  Sum_probs=21.3

Q ss_pred             cCCCCCccCCC--CcccccCchHHHHHHHhhcCCC
Q psy4683          79 HATQGLFSCDL--CSYTSTQKYYLVKHKSRHIKDY  111 (196)
Q Consensus        79 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  111 (196)
                      |.+++||.|.+  |++.|...++|..|++.|++++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            66666666655  6666666666666666666553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.9e-10  Score=52.41  Aligned_cols=27  Identities=33%  Similarity=0.748  Sum_probs=21.9

Q ss_pred             CCccCc--ccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCS--VCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|+  .|++.|...++|.+|+++|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            478885  488888888888888888887

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=9.3e-10  Score=50.43  Aligned_cols=27  Identities=37%  Similarity=0.807  Sum_probs=23.0

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|.+  |++.|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788876  99999999999999988876

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=3e-09  Score=49.15  Aligned_cols=26  Identities=19%  Similarity=0.347  Sum_probs=12.9

Q ss_pred             CccCCC--CcccccCchHHHHHHHhhcC
Q psy4683          84 LFSCDL--CSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        84 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  109 (196)
                      ||.|+.  |++.|.....|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            445544  55555555555555555444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.5e-09  Score=48.42  Aligned_cols=26  Identities=35%  Similarity=0.714  Sum_probs=22.5

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhh
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  164 (196)
                      +||.|+.  |+++|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888877  9999999999999999885

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.3e-09  Score=49.10  Aligned_cols=26  Identities=23%  Similarity=0.480  Sum_probs=11.8

Q ss_pred             CccCCC--CcccccCchHHHHHHHhhcC
Q psy4683          84 LFSCDL--CSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        84 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  109 (196)
                      ||.|++  |++.|.....|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            444433  44444444444444444443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=3.5e-09  Score=49.67  Aligned_cols=28  Identities=39%  Similarity=0.774  Sum_probs=23.4

Q ss_pred             CCCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++||.|.+  |++.|...++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57888877  88888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.1e-08  Score=47.65  Aligned_cols=21  Identities=29%  Similarity=0.420  Sum_probs=9.6

Q ss_pred             CcccccCchHHHHHHHhhcCC
Q psy4683          90 CSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        90 C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      |++.|....+|..|+++|+++
T Consensus        10 C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_          10 CGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCcCChhHhhhhcCccccc
Confidence            444444444444444444443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=5.4e-08  Score=45.50  Aligned_cols=26  Identities=31%  Similarity=0.594  Sum_probs=14.2

Q ss_pred             CCccCCC--CcccccCchHHHHHHHhhc
Q psy4683          83 GLFSCDL--CSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        83 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  108 (196)
                      +||.|+.  |++.|....+|.+|++.|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4555544  5555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.49  E-value=2.5e-08  Score=45.56  Aligned_cols=25  Identities=20%  Similarity=0.470  Sum_probs=11.2

Q ss_pred             CccCCC--CcccccCchHHHHHHHhhc
Q psy4683          84 LFSCDL--CSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        84 ~~~C~~--C~~~f~~~~~l~~H~~~h~  108 (196)
                      ||.|++  |++.|.....|.+|++.|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            444433  4444444444444444443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=2.4e-08  Score=41.99  Aligned_cols=26  Identities=46%  Similarity=0.898  Sum_probs=16.9

Q ss_pred             CccCcccccccCCchhHHHHHHHhhc
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |++|..|++.|+....|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45666666666666666666666654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.4e-08  Score=43.64  Aligned_cols=24  Identities=25%  Similarity=0.450  Sum_probs=13.3

Q ss_pred             CccCCC--CcccccCchHHHHHHHhh
Q psy4683          84 LFSCDL--CSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        84 ~~~C~~--C~~~f~~~~~l~~H~~~h  107 (196)
                      ||.|+.  |++.|....+|.+|++.|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            555554  555555555555555554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.6e-07  Score=39.43  Aligned_cols=22  Identities=27%  Similarity=0.523  Sum_probs=9.9

Q ss_pred             cCCCCcccccCchHHHHHHHhh
Q psy4683          86 SCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        86 ~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      +|..|++.|..+..|..|++.|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGC
T ss_pred             ccchhhhHhcchhHHHHHhhcc
Confidence            3444444444444444444444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.3e-07  Score=41.67  Aligned_cols=28  Identities=29%  Similarity=0.587  Sum_probs=23.5

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++||.|++|...|.....+..|.++|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4788888888888888888888888876

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.7e-07  Score=41.62  Aligned_cols=29  Identities=17%  Similarity=0.525  Sum_probs=19.4

Q ss_pred             ccccccccccCCHHHHHHHHHhhcCCCCCc
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHATQGLF   85 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~   85 (196)
                      ..|..||+.|.+.-.|.+|. ..|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhk-lshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHK-LSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHG-GGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhh-cccCCCCCC
Confidence            45666677666666666666 666666665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=1.6e-07  Score=40.77  Aligned_cols=27  Identities=33%  Similarity=0.810  Sum_probs=21.9

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhh
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478888888888888888888888774

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=1.3e-07  Score=40.79  Aligned_cols=28  Identities=29%  Similarity=0.576  Sum_probs=21.0

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++||+|..|.+.-++.+.|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4677777777777777777777777765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3e-07  Score=41.48  Aligned_cols=29  Identities=24%  Similarity=0.487  Sum_probs=17.2

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcCCCcc
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIKDYNV  113 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  113 (196)
                      ..|..||+.|.....|.+|..+|.+++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            44666666666666666666666665554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.15  E-value=6.5e-07  Score=38.83  Aligned_cols=25  Identities=24%  Similarity=0.486  Sum_probs=12.9

Q ss_pred             CCccCCCCcccccCchHHHHHHHhh
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      +||.|.+||+.|.......+|.+.|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=9.5e-07  Score=38.86  Aligned_cols=27  Identities=22%  Similarity=0.375  Sum_probs=15.0

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhcC
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      +||.|++|+..|..+..+..|.++|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            455555555555555555555555543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.5e-06  Score=37.61  Aligned_cols=25  Identities=20%  Similarity=0.289  Sum_probs=20.8

Q ss_pred             ccCcccccccCCchhHHHHHHHhhc
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      |.|+.||......+-|..|.++|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            6788888888888888888888887

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.1e-06  Score=38.75  Aligned_cols=27  Identities=26%  Similarity=0.591  Sum_probs=20.0

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..  |+++|...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677765  77888888888888877654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.6e-06  Score=37.26  Aligned_cols=26  Identities=31%  Similarity=0.637  Sum_probs=11.7

Q ss_pred             CCccCCCCcccccCchHHHHHHHhhc
Q psy4683          83 GLFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        83 ~~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      +||+|..|.....+.+.|.-|++.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CcceeeecccccCCchheEEeeeccc
Confidence            34444444444444444444444443

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=6.6e-07  Score=38.29  Aligned_cols=25  Identities=36%  Similarity=0.792  Sum_probs=18.4

Q ss_pred             ccCcccccccCCchhHHHHHHHhhc
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +.|.+||++|.-.+.|.+|+-+|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4677777777777777777777766

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.6e-06  Score=36.29  Aligned_cols=26  Identities=27%  Similarity=0.614  Sum_probs=22.2

Q ss_pred             CCccCcccccccCCchhHHHHHHHhh
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      +||+|..|.+.-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.89  E-value=4.1e-06  Score=36.07  Aligned_cols=26  Identities=35%  Similarity=0.659  Sum_probs=19.9

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhh
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  164 (196)
                      .||.|+.  |++.|+..+.|.+|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5778865  8888888888888877763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=6.6e-06  Score=35.12  Aligned_cols=25  Identities=24%  Similarity=0.498  Sum_probs=17.3

Q ss_pred             ccccccccccCCHHHHHHHHHhhcCC
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h~~   81 (196)
                      ..|..||+.|...+.|++|+ ..|++
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccC
Confidence            45777777777777777777 66665

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.78  E-value=3e-06  Score=35.07  Aligned_cols=24  Identities=33%  Similarity=0.861  Sum_probs=18.1

Q ss_pred             ccCcccccccCCchhHHHHHHHhh
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      |+|..|.++|.-.+.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567778888887777777777763

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.4e-05  Score=34.48  Aligned_cols=26  Identities=23%  Similarity=0.484  Sum_probs=14.4

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcCC
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      |.|+.||......+.|..|.+.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555555555555555555555543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.77  E-value=1.4e-05  Score=33.60  Aligned_cols=25  Identities=32%  Similarity=0.678  Sum_probs=16.7

Q ss_pred             cCCCCcccccCchHHHHHHHhhcCC
Q psy4683          86 SCDLCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        86 ~C~~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      .|+.|.+.|.++..|.-|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666666676666666666666665

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=9.9e-06  Score=34.90  Aligned_cols=28  Identities=36%  Similarity=0.599  Sum_probs=23.3

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++.|.|..|...|..+-.|+.|+..|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            4668888888888888888888888887

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.7e-05  Score=34.39  Aligned_cols=27  Identities=26%  Similarity=0.413  Sum_probs=22.0

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..|.+.....++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            478888888888888888888888655

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.7e-05  Score=37.73  Aligned_cols=25  Identities=12%  Similarity=0.349  Sum_probs=18.9

Q ss_pred             CCCCccCCCCcccccCchHHHHHHH
Q psy4683          81 TQGLFSCDLCSYTSTQKYYLVKHKS  105 (196)
Q Consensus        81 ~~~~~~C~~C~~~f~~~~~l~~H~~  105 (196)
                      |.+||.|..|++.|.....+.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            5677888888888877777777754

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=2.4e-05  Score=33.90  Aligned_cols=27  Identities=19%  Similarity=0.498  Sum_probs=16.1

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCC
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   81 (196)
                      ||.|..|.....+.++|..|+++.|+.
T Consensus         2 py~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             Cccccccccccccchhhhhhhhccccc
Confidence            566666666666666666666555543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=2.2e-05  Score=32.98  Aligned_cols=24  Identities=33%  Similarity=0.710  Sum_probs=15.4

Q ss_pred             cCcccccccCCchhHHHHHHHhhc
Q psy4683         142 TCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       142 ~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|+.|.+.|.+.-.|..|-+.|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            466666666666666666666665

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=2.1e-05  Score=37.38  Aligned_cols=29  Identities=21%  Similarity=0.480  Sum_probs=24.0

Q ss_pred             cCCCCccCcccccccCCchhHHHHHHHhh
Q psy4683         136 HCAQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       136 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      +|.+||.|..|++.|.-+.++.+|.....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C~   29 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSCT   29 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhhh
Confidence            46789999999999999999998876643

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.1e-05  Score=33.94  Aligned_cols=25  Identities=40%  Similarity=0.639  Sum_probs=22.0

Q ss_pred             CccCcccccccCCchhHHHHHHHhh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ||.|..|..+|.+..+|..||.+.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            7899999999999999999998744

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=5.9e-05  Score=32.41  Aligned_cols=25  Identities=28%  Similarity=0.530  Sum_probs=12.6

Q ss_pred             ccCCCCcccccCchHHHHHHHhhcC
Q psy4683          85 FSCDLCSYTSTQKYYLVKHKSRHIK  109 (196)
Q Consensus        85 ~~C~~C~~~f~~~~~l~~H~~~h~~  109 (196)
                      |.|..|...|...-.|..||.+|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4455555555555555555555543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.49  E-value=3.3e-05  Score=36.49  Aligned_cols=23  Identities=39%  Similarity=0.751  Sum_probs=9.8

Q ss_pred             ccCcccccccCCchhHHHHHHHh
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      |.|..|++.|.+...|--|++.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            44444444444444444444443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.7e-05  Score=34.16  Aligned_cols=24  Identities=29%  Similarity=0.459  Sum_probs=12.5

Q ss_pred             CccCCC--CcccccCchHHHHHHHhh
Q psy4683          84 LFSCDL--CSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        84 ~~~C~~--C~~~f~~~~~l~~H~~~h  107 (196)
                      ||.|..  |++.+...+.|+.|++.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            455544  555555555555555543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.45  E-value=5.2e-05  Score=32.69  Aligned_cols=27  Identities=33%  Similarity=0.651  Sum_probs=22.7

Q ss_pred             CCccCcc--cccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||.|..  |.+.|.+.-.|.+|.-+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            4788865  89999999999999988887

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.43  E-value=4.6e-05  Score=33.72  Aligned_cols=27  Identities=30%  Similarity=0.770  Sum_probs=19.3

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCC
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   81 (196)
                      ||.|..|++.|..+.-|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            567777777777777777777666654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=3.7e-05  Score=33.12  Aligned_cols=23  Identities=26%  Similarity=0.579  Sum_probs=13.6

Q ss_pred             CccCCCCcccccCchHHHHHHHh
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSR  106 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~  106 (196)
                      ||.|..|...|.++.+|..||.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45566666666666666666553

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=5.9e-05  Score=32.00  Aligned_cols=21  Identities=19%  Similarity=0.477  Sum_probs=9.7

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ||+|..|+......++|..|+
T Consensus         3 p~kck~cdyaaadsssl~kh~   23 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHL   23 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CcccccccchhcchhhHhhhh
Confidence            444444444444444444444

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=2.7e-05  Score=34.48  Aligned_cols=27  Identities=30%  Similarity=0.659  Sum_probs=19.2

Q ss_pred             CCccCcc--cccccCCchhHHHHH-HHhhc
Q psy4683         139 QPHTCSV--CKKIFVNKKNLTTHK-KIHLA  165 (196)
Q Consensus       139 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  165 (196)
                      +||.|..  |.+.|++.+.-.+|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4677765  788888877777776 66643

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=6.3e-05  Score=32.48  Aligned_cols=27  Identities=26%  Similarity=0.431  Sum_probs=22.0

Q ss_pred             CCccCcccccccCCchhHHHHHHHhhc
Q psy4683         139 QPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       139 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      +||+|..|.......++|..|++..++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            478888888888888888888877665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.34  E-value=0.0001  Score=34.79  Aligned_cols=26  Identities=23%  Similarity=0.607  Sum_probs=17.6

Q ss_pred             cccccccccccCCHHHHHHHHHhhcCC
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   81 (196)
                      .|.|..|++.|.+..+|-.|+ ..|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~-~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHM-NVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHH-HTTCC
T ss_pred             ccCCCCCCCccCCcccccchH-hhhcc
Confidence            467777777777777777777 45543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.26  E-value=0.00015  Score=29.85  Aligned_cols=20  Identities=30%  Similarity=0.798  Sum_probs=12.9

Q ss_pred             ccccccccccCCHHHHHHHH
Q psy4683          56 FPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~   75 (196)
                      |+|..|.+.|-.++.|.+|+
T Consensus         1 ykcglcersfveksalsrhq   20 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQ   20 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG
T ss_pred             CcccchHHHHHHHHHHHHHH
Confidence            45666666666666666666

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.24  E-value=0.00012  Score=31.38  Aligned_cols=16  Identities=19%  Similarity=0.310  Sum_probs=6.6

Q ss_pred             CcccccCchHHHHHHH
Q psy4683          90 CSYTSTQKYYLVKHKS  105 (196)
Q Consensus        90 C~~~f~~~~~l~~H~~  105 (196)
                      |++.|...+.|.+|.+
T Consensus        11 cdk~fs~ps~lkrhek   26 (29)
T d2j7ja2          11 CDKRFSLPSRLKRHEK   26 (29)
T ss_dssp             CCCEESSHHHHHHHHH
T ss_pred             ccccccCHHHHhhhhh
Confidence            4444444444444433

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=0.00014  Score=29.95  Aligned_cols=21  Identities=33%  Similarity=0.697  Sum_probs=15.0

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ||+|..|...|-.+..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            567777777777777777776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.18  E-value=4.9e-05  Score=33.62  Aligned_cols=25  Identities=24%  Similarity=0.600  Sum_probs=20.9

Q ss_pred             CccCcccccccCCchhHHHHHHHhh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ||.|.+|++.|+.+.-|.+|.+.-+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            7889999999999999999976633

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00018  Score=31.03  Aligned_cols=22  Identities=36%  Similarity=0.736  Sum_probs=10.6

Q ss_pred             CccCCCCcccccCchHHHHHHH
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKS  105 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~  105 (196)
                      ||+|..|.......++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            4444444444444444444444

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=7e-05  Score=33.11  Aligned_cols=26  Identities=31%  Similarity=0.786  Sum_probs=13.6

Q ss_pred             cccccc--cccccCCHHHHHHHHHhhcC
Q psy4683          55 KFPCRL--CSQEFDTKEQRKKHERKDHA   80 (196)
Q Consensus        55 ~~~C~~--C~~~f~~~~~l~~H~~~~h~   80 (196)
                      ||.|..  |.+.|++.+....|+.++|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            455554  55555555555555544443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00011  Score=31.24  Aligned_cols=25  Identities=36%  Similarity=0.677  Sum_probs=21.4

Q ss_pred             CccCcccccccCCchhHHHHHHHhh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      |-+|+.|.++.++.+.|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5679999999999999999988874

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.00  E-value=0.00015  Score=31.26  Aligned_cols=26  Identities=27%  Similarity=0.718  Sum_probs=13.6

Q ss_pred             cccccc--cccccCCHHHHHHHHHhhcCC
Q psy4683          55 KFPCRL--CSQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        55 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~   81 (196)
                      ||+|..  |.++|.+...|.+|. .+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs-~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHS-LTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHH-HHHHT
T ss_pred             CcCcccccccccchhhhhhhhhh-ccccC
Confidence            445543  555555555555555 44443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.94  E-value=0.00025  Score=29.16  Aligned_cols=23  Identities=30%  Similarity=0.443  Sum_probs=20.1

Q ss_pred             CccCCCCcccccCchHHHHHHHh
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSR  106 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~  106 (196)
                      ||+|..|...|..+..|+.|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            78999999999999999998753

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00055  Score=31.96  Aligned_cols=27  Identities=33%  Similarity=0.675  Sum_probs=21.8

Q ss_pred             CCCccC--cccccccCCchhHHHHHHHhh
Q psy4683         138 AQPHTC--SVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       138 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      ++||.|  +-|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            678888  558888888888888888774

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.59  E-value=0.00068  Score=27.92  Aligned_cols=23  Identities=43%  Similarity=0.704  Sum_probs=20.3

Q ss_pred             ccCcccccccCCchhHHHHHHHh
Q psy4683         141 HTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       141 ~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      |.|+.|-+.|....++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            78999999999999999998774

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00062  Score=33.45  Aligned_cols=25  Identities=28%  Similarity=0.616  Sum_probs=22.4

Q ss_pred             CccCcccccccCCchhHHHHHHHhh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      .|.|..|++.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5889999999999999999998874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.58  E-value=0.0012  Score=27.81  Aligned_cols=22  Identities=27%  Similarity=0.526  Sum_probs=12.5

Q ss_pred             CccCCCCcccccCchHHHHHHH
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKS  105 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~  105 (196)
                      ||.|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4556666666655555555543

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.57  E-value=0.00059  Score=28.73  Aligned_cols=23  Identities=35%  Similarity=0.736  Sum_probs=19.1

Q ss_pred             CccCcccccccCCchhHHHHHHH
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~  162 (196)
                      ||.|+.||+.|-...+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999999888888888653

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00074  Score=30.43  Aligned_cols=26  Identities=23%  Similarity=0.526  Sum_probs=21.8

Q ss_pred             CccCcccccccCCchhHHHHHHHhhc
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.|..|++.|..+..+.+|....+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47899999999999988888877665

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0021  Score=27.11  Aligned_cols=25  Identities=36%  Similarity=0.610  Sum_probs=20.7

Q ss_pred             cccccccccccCCHHHHHHHHHhhc
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHERKDH   79 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~~~~h   79 (196)
                      .|+|+.|+.....++.|..|++..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3789999999999999999986655

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0015  Score=30.49  Aligned_cols=27  Identities=30%  Similarity=0.565  Sum_probs=17.0

Q ss_pred             CCccccc--ccccccCCchHHHhhhhhhc
Q psy4683         110 DYNVFCK--ICQLGFLSKNELNVHNIKQH  136 (196)
Q Consensus       110 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~  136 (196)
                      ++||.|.  -|+..|.+...|..|+..|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            5666663  36666666666666666554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0029  Score=31.01  Aligned_cols=25  Identities=28%  Similarity=0.566  Sum_probs=20.3

Q ss_pred             CccCCCCcccccCchHHHHHHHhhc
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKSRHI  108 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~~h~  108 (196)
                      .|.|-.|++.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4778888888888888888888774

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.75  E-value=0.0041  Score=25.49  Aligned_cols=24  Identities=33%  Similarity=0.797  Sum_probs=17.0

Q ss_pred             ccccccccccCCHHHHHHHHHhhc
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDH   79 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h   79 (196)
                      |+|+.|=+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            567777777777777777775544

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0043  Score=26.19  Aligned_cols=22  Identities=36%  Similarity=0.658  Sum_probs=9.7

Q ss_pred             cCCCCcccccCchHHHHHHHhh
Q psy4683          86 SCDLCSYTSTQKYYLVKHKSRH  107 (196)
Q Consensus        86 ~C~~C~~~f~~~~~l~~H~~~h  107 (196)
                      +|+.|+.+..++..|+-|.+.|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            3444444444444444444443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.60  E-value=0.0054  Score=29.91  Aligned_cols=28  Identities=29%  Similarity=0.663  Sum_probs=23.9

Q ss_pred             CCCCccCcccccccCCchhHHHHHHHhh
Q psy4683         137 CAQPHTCSVCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       137 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  164 (196)
                      .++|-.|++|+-..+...+|++|+..-+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4678899999999999999999988744

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.0038  Score=26.28  Aligned_cols=24  Identities=21%  Similarity=0.551  Sum_probs=19.8

Q ss_pred             CccCcccccccCCchhHHHHHHHh
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~~h  163 (196)
                      .|.||.|+......+.|+.|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            478899998888888888888763

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0042  Score=27.90  Aligned_cols=21  Identities=24%  Similarity=0.703  Sum_probs=17.7

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      .|.|..||+.|..+..+.+|-
T Consensus         4 afvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHh
Confidence            478888888888888888887

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.30  E-value=0.0066  Score=26.39  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=18.0

Q ss_pred             CccCC--CCcccccCchHHHHHHHhhcCC
Q psy4683          84 LFSCD--LCSYTSTQKYYLVKHKSRHIKD  110 (196)
Q Consensus        84 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  110 (196)
                      .|.|.  .|+..|...+.|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            45664  3777777777777777777653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.0042  Score=26.30  Aligned_cols=18  Identities=28%  Similarity=0.698  Sum_probs=12.7

Q ss_pred             cccccCCchhHHHHHHHh
Q psy4683         146 CKKIFVNKKNLTTHKKIH  163 (196)
Q Consensus       146 C~~~f~~~~~l~~H~~~h  163 (196)
                      |++.|+..+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            777777777777776665

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.79  E-value=0.013  Score=25.44  Aligned_cols=26  Identities=19%  Similarity=0.369  Sum_probs=20.1

Q ss_pred             CccC--cccccccCCchhHHHHHHHhhc
Q psy4683         140 PHTC--SVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       140 ~~~C--~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      .|.|  +.|+-.|.....|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            4666  4588888888888888888887

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.67  E-value=0.011  Score=26.24  Aligned_cols=21  Identities=24%  Similarity=0.622  Sum_probs=19.6

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy4683          55 KFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        55 ~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      .|.|..||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            488999999999999999998

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.64  E-value=0.011  Score=24.58  Aligned_cols=24  Identities=29%  Similarity=0.544  Sum_probs=17.5

Q ss_pred             ccCc--ccccccCCchhHHHHHHHhh
Q psy4683         141 HTCS--VCKKIFVNKKNLTTHKKIHL  164 (196)
Q Consensus       141 ~~C~--~C~~~f~~~~~l~~H~~~h~  164 (196)
                      |.|.  -|++.|.....|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            4453  38888888888888887775

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.012  Score=31.17  Aligned_cols=41  Identities=27%  Similarity=0.624  Sum_probs=26.1

Q ss_pred             CCCCCCcccccccccccCCHHHHHHHHHhhcCCCCCccCCCCccc
Q psy4683          49 NVTSDTKFPCRLCSQEFDTKEQRKKHERKDHATQGLFSCDLCSYT   93 (196)
Q Consensus        49 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~   93 (196)
                      ..+....|.|+.|++.|.....++. +   -.....|.|..|+..
T Consensus         8 d~~~~~~y~Cp~C~~~ys~Lda~~L-~---d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           8 DSTNRASFKCPVCSSTFTDLEANQL-F---DPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHHH-E---ETTTTEEBCSSSCCB
T ss_pred             ccccCCceECCCCCCCcchhhHHHh-c---CcCCCeEEecCCCCE
Confidence            3344456888888888876665543 2   223356888888754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.52  E-value=0.0086  Score=26.94  Aligned_cols=29  Identities=17%  Similarity=0.435  Sum_probs=23.7

Q ss_pred             CCCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         137 CAQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       137 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ++..|.|..|.+.+..-+++.+|..+.+.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            34578999999999999999999877543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.011  Score=26.75  Aligned_cols=15  Identities=40%  Similarity=0.587  Sum_probs=6.4

Q ss_pred             ccCchHHHHHHHhhc
Q psy4683          94 STQKYYLVKHKSRHI  108 (196)
Q Consensus        94 f~~~~~l~~H~~~h~  108 (196)
                      |.....|..|++.|+
T Consensus        17 f~a~YkLv~H~R~HT   31 (33)
T d2glia2          17 FKAQYMLVVHMRRHT   31 (33)
T ss_dssp             CSSHHHHHHHTHHHH
T ss_pred             chhHHHHHHHHhhcC
Confidence            444444444444443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.06  E-value=0.011  Score=26.25  Aligned_cols=22  Identities=23%  Similarity=0.486  Sum_probs=16.9

Q ss_pred             CccCcccccccCCchhHHHHHH
Q psy4683         140 PHTCSVCKKIFVNKKNLTTHKK  161 (196)
Q Consensus       140 ~~~C~~C~~~f~~~~~l~~H~~  161 (196)
                      .|.|+-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4778888888888888887753

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.02  Score=25.92  Aligned_cols=19  Identities=16%  Similarity=0.197  Sum_probs=11.4

Q ss_pred             ccccCCHHHHHHHHHhhcCC
Q psy4683          62 SQEFDTKEQRKKHERKDHAT   81 (196)
Q Consensus        62 ~~~f~~~~~l~~H~~~~h~~   81 (196)
                      ++.|.....|..|+ +.|+|
T Consensus        14 ~~pf~a~YkLv~H~-R~HTg   32 (33)
T d2glia2          14 LRPFKAQYMLVVHM-RRHTG   32 (33)
T ss_dssp             TCCCSSHHHHHHHT-HHHHC
T ss_pred             CCcchhHHHHHHHH-hhcCC
Confidence            45566666666666 45654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.03  Score=23.79  Aligned_cols=18  Identities=28%  Similarity=0.543  Sum_probs=6.9

Q ss_pred             cCcccccccCCchhHHHH
Q psy4683         142 TCSVCKKIFVNKKNLTTH  159 (196)
Q Consensus       142 ~C~~C~~~f~~~~~l~~H  159 (196)
                      .|..||+...+...+..|
T Consensus         4 tc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           4 TCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCSSSCCCCSSHHHHHHH
T ss_pred             echhHHHHHhhccCceEE
Confidence            333333333333333333

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.49  E-value=0.046  Score=26.52  Aligned_cols=27  Identities=15%  Similarity=0.410  Sum_probs=16.9

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhc
Q psy4683          53 DTKFPCRLCSQEFDTKEQRKKHERKDH   79 (196)
Q Consensus        53 ~~~~~C~~C~~~f~~~~~l~~H~~~~h   79 (196)
                      +.|..|+.|+.......+|.+|+...|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            345666666666666666666664444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.65  E-value=0.063  Score=22.77  Aligned_cols=28  Identities=18%  Similarity=0.294  Sum_probs=23.2

Q ss_pred             cccccccccccCCchHHHhhhhhhcCCC
Q psy4683         112 NVFCKICQLGFLSKNELNVHNIKQHCAQ  139 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  139 (196)
                      -|.|..||+...+..++.-|.-..+...
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~~   29 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNSL   29 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccCC
Confidence            4789999999999999999987666543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.04  E-value=0.024  Score=30.45  Aligned_cols=22  Identities=23%  Similarity=0.341  Sum_probs=14.4

Q ss_pred             CcccccccccccCCHHHHHHHH
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHE   75 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~   75 (196)
                      ..|-|..|++.|.+...|..|.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHT
T ss_pred             CEEecccccCccCCHHHHHHHH
Confidence            3466666777776666666665

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.51  E-value=0.11  Score=23.20  Aligned_cols=22  Identities=23%  Similarity=0.505  Sum_probs=10.6

Q ss_pred             CccCCCCcccccCchHHHHHHH
Q psy4683          84 LFSCDLCSYTSTQKYYLVKHKS  105 (196)
Q Consensus        84 ~~~C~~C~~~f~~~~~l~~H~~  105 (196)
                      .|.|..|.+.+...+++.+|..
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHH
Confidence            3445555555555555544443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.09  E-value=0.083  Score=27.58  Aligned_cols=28  Identities=25%  Similarity=0.466  Sum_probs=25.2

Q ss_pred             CCCccCcccccccCCchhHHHHHHHhhc
Q psy4683         138 AQPHTCSVCKKIFVNKKNLTTHKKIHLA  165 (196)
Q Consensus       138 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  165 (196)
                      ...|.|..|+-.|.+.+.|..|+..|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3469999999999999999999999974

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.81  E-value=0.15  Score=21.45  Aligned_cols=19  Identities=42%  Similarity=0.749  Sum_probs=14.1

Q ss_pred             cccccccCCchhHHHHHHH
Q psy4683         144 SVCKKIFVNKKNLTTHKKI  162 (196)
Q Consensus       144 ~~C~~~f~~~~~l~~H~~~  162 (196)
                      +-||+.|+++..|..|.+-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4588888888877777665

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.79  E-value=0.13  Score=27.45  Aligned_cols=25  Identities=24%  Similarity=0.315  Sum_probs=21.8

Q ss_pred             CCCccCCCCcccccCchHHHHHHHh
Q psy4683          82 QGLFSCDLCSYTSTQKYYLVKHKSR  106 (196)
Q Consensus        82 ~~~~~C~~C~~~f~~~~~l~~H~~~  106 (196)
                      ...|-|..|++.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3458999999999999999999763

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.45  E-value=0.12  Score=24.05  Aligned_cols=9  Identities=22%  Similarity=0.626  Sum_probs=3.8

Q ss_pred             CCccCCCCc
Q psy4683          83 GLFSCDLCS   91 (196)
Q Consensus        83 ~~~~C~~C~   91 (196)
                      .|-.|+.|+
T Consensus        19 ~P~~CPvCg   27 (37)
T d1nnqa2          19 APEYCPVCG   27 (37)
T ss_dssp             CCSBCTTTC
T ss_pred             CCCcCCCCC
Confidence            334444444

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=86.89  E-value=0.14  Score=23.63  Aligned_cols=6  Identities=33%  Similarity=1.298  Sum_probs=2.3

Q ss_pred             cCCCCc
Q psy4683          86 SCDLCS   91 (196)
Q Consensus        86 ~C~~C~   91 (196)
                      .|+.||
T Consensus         7 vC~vCG   12 (36)
T d1yuza2           7 LCPICG   12 (36)
T ss_dssp             ECSSSC
T ss_pred             ECCCCC
Confidence            333333

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.79  E-value=0.42  Score=24.83  Aligned_cols=26  Identities=15%  Similarity=0.543  Sum_probs=18.4

Q ss_pred             CcccccccccccCCHHHHHHHHHhhcC
Q psy4683          54 TKFPCRLCSQEFDTKEQRKKHERKDHA   80 (196)
Q Consensus        54 ~~~~C~~C~~~f~~~~~l~~H~~~~h~   80 (196)
                      ..|+|..|+..|.+...|..|+ ..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl-~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHL-NIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHH-HHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHH-Hhcc
Confidence            3577777777777777777777 4453

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=84.88  E-value=0.2  Score=24.35  Aligned_cols=9  Identities=33%  Similarity=0.815  Sum_probs=5.4

Q ss_pred             CccCccccc
Q psy4683         140 PHTCSVCKK  148 (196)
Q Consensus       140 ~~~C~~C~~  148 (196)
                      -|.||+|+.
T Consensus        29 dw~CP~C~a   37 (45)
T d6rxna_          29 DWCCPVCGV   37 (45)
T ss_dssp             TCBCTTTCC
T ss_pred             CCCCcCCCC
Confidence            356776663

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.41  E-value=0.35  Score=21.72  Aligned_cols=24  Identities=21%  Similarity=0.450  Sum_probs=14.4

Q ss_pred             ccccccccccCCHHHHHHHHHhhc
Q psy4683          56 FPCRLCSQEFDTKEQRKKHERKDH   79 (196)
Q Consensus        56 ~~C~~C~~~f~~~~~l~~H~~~~h   79 (196)
                      ..|-+|-+.|.+..++-+|+...|
T Consensus         4 ltclecmrtfkssfsiwrhqvevh   27 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVH   27 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTS
T ss_pred             ccHHHHHHHHHHHHHHHHhhheec
Confidence            456666666666666666665444

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.11  E-value=0.42  Score=27.75  Aligned_cols=29  Identities=24%  Similarity=0.667  Sum_probs=16.0

Q ss_pred             cccccccccccCCchHHHhhhhhhcCCCCccCcccccccC
Q psy4683         112 NVFCKICQLGFLSKNELNVHNIKQHCAQPHTCSVCKKIFV  151 (196)
Q Consensus       112 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~  151 (196)
                      |-.|..||.+|...           -.+|-+||.|.....
T Consensus        67 Pp~CrkCGfvFr~~-----------~kkPSRCP~CKSE~I   95 (105)
T d2gmga1          67 PAQCRKCGFVFKAE-----------INIPSRCPKCKSEWI   95 (105)
T ss_dssp             CCBBTTTCCBCCCC-----------SSCCSSCSSSCCCCB
T ss_pred             ChhhhhcCCeeccc-----------CCCCCCCCCCCCccc
Confidence            34566677666321           245666777665443