Psyllid ID: psy4830

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
Protein Sequence
MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHcccccccccccccccccccEcccccEEEEcEEEccccccccccccccEEEEccccHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccHccccccccHHHHHHccc
Coil and Loop (DISEMBL)
mklhsgnkpyhctacdasfcrkpyleihmrthtgerpfqCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMrthtgerpyqcevcnkrfsqksslntHKRIHINYlhtedkpyhctgcdaafsrkqylEVNHTTVLAVmqpslgnntwSAKFLTSLFSHQVhmrthtgerpfqcavcskrftqksslnthkrvhtgerpyacdicdkrfaVKSYVTshrwshvgdkpfgctschltftsKSQFAVHLRTHhtvganhvcnvcgrsfvrdsyLIRHQNK
Flexible Loop (DISEMBL)
mklhsgnkpyhctacdasfCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRThtgerpyqcEVCNKRfsqksslnthKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRftqksslnthkrvhtgerpyacdicDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSfvrdsylirhqnk
Low Complexity Region (SEG)
MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK
Disordered region (IsUnstruct)
*********YHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLI*****
Disordered Region (DISOPRED)
MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ**
Disordered Region (DISEMBL)
********PYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK
Disordered Region (DISPRO)
M***SGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFV***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	292	2.2.26 [Sep-21-2011]
Q96RE9	604	Zinc finger protein 300 O	yes	N/A	0.979	0.473	0.405	3e-61
P51523	738	Zinc finger protein 84 OS	no	N/A	0.952	0.376	0.435	5e-61
Q6P560	627	Zinc finger protein 182 O	no	N/A	0.856	0.398	0.435	1e-60
P17025	639	Zinc finger protein 182 O	no	N/A	0.856	0.391	0.435	1e-60
Q5R9S5	620	Zinc finger protein 182 O	no	N/A	0.856	0.403	0.435	1e-60
Q6ZMW2	699	Zinc finger protein 782 O	no	N/A	0.962	0.402	0.434	2e-60
Q6ZN57	461	Zinc finger protein 2 hom	no	N/A	0.979	0.620	0.392	1e-59
Q9Y6Q3	630	Zinc finger protein 37 ho	no	N/A	0.976	0.452	0.394	2e-59
Q14587	947	Zinc finger protein 268 O	no	N/A	0.948	0.292	0.428	3e-59
P51814	821	Zinc finger protein 41 OS	no	N/A	0.958	0.341	0.415	5e-59

>sp|Q96RE9|ZN300_HUMAN Zinc finger protein 300 OS=Homo sapiens GN=ZNF300 PE=2 SV=1

 Score =  235 bits (599), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 170/313 (54%), Gaps = 27/313 (8%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            ++H+G KPY C AC  +F  K +L +H RTHTGE+P+ C  C K FSQKS+L  H+R+H
Sbjct: 288 QRIHTGKKPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVH 347

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINY- 119
                Y C  C   F+ K  L +H R HTGE+PY+C  C K FSQKS L  H R H    
Sbjct: 348 TGEKPYECSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEK 407

Query: 120 ----------------------LHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSL 157
                                 +HT +KPY C  C+ AFSRK  L + H  V    +P  
Sbjct: 408 PYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTEL-ITHQLVHTGEKPY- 465

Query: 158 GNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
              T   K  +      +H RTHTGE+P++C+ C K F QKS L  H+R+HTGE+PY C 
Sbjct: 466 -ECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICT 524

Query: 218 ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCG 277
            C K F+ KS++  H+  H G+KP+ C  C   F+ KS   +H R  HT    + C +CG
Sbjct: 525 ECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRI-HTGERPYQCAICG 583

Query: 278 RSFVRDSYLIRHQ 290
           ++F++ S L  HQ
Sbjct: 584 KAFIQKSQLTVHQ 596

Has a transcriptional repressor activity.
Homo sapiens (taxid: 9606)

>sp|P51523|ZNF84_HUMAN Zinc finger protein 84 OS=Homo sapiens GN=ZNF84 PE=1 SV=2

 Score =  234 bits (598), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 125/287 (43%), Positives = 169/287 (58%), Gaps = 9/287 (3%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
           H+G KP+ C+ C  +F RK  L  H RTHTGE+P++C  C K FS+K +L  H+R+H   
Sbjct: 453 HTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGE 512

Query: 64  IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
             Y C  C   F  K +L  H RTHTGE+PY+C  C K F +KSSL TH+R      HT 
Sbjct: 513 KPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQRT-----HTG 567

Query: 124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
           +KPY C  C+ AFS+K  L   H  +    +P   +    A F  S      H+RTHTGE
Sbjct: 568 EKPYECRDCEKAFSQKSQLNT-HQRIHTGEKPYECSLCRKAFFEKSELIR--HLRTHTGE 624

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
           +P++C  C K F +KSSL  H+R+HTGE+P+ C  C K F+ KS++  H+ +H G+KP+G
Sbjct: 625 KPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKPYG 684

Query: 244 CTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           C+ C   F+ KSQ   H R  HT    + C  CG++F + S LI HQ
Sbjct: 685 CSECRKAFSQKSQLVNHQRI-HTGEKPYRCIECGKAFSQKSQLINHQ 730

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6P560|ZN182_MOUSE Zinc finger protein 182 OS=Mus musculus GN=Znf182 PE=2 SV=1

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/287 (43%), Positives = 162/287 (56%), Gaps = 37/287 (12%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
           H+G KP+ C+ C  +F  K  L IH RTHTGE+P +C  C K F++KS L  H+R+H   
Sbjct: 369 HTGKKPHECSECKKTFSDKSTLVIHQRTHTGEKPHKCTECGKSFNEKSTLIVHQRIHTGE 428

Query: 64  IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
             Y CD C  TFT K NL VH RTH+GE+P++C  C K FSQKS L  H+R      HT 
Sbjct: 429 KPYECDVCGKTFTQKSNLGVHQRTHSGEKPFECNECEKAFSQKSYLMLHQR-----GHTG 483

Query: 124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
           +KPY C  C+ AFS+K YL                                +H RTHT E
Sbjct: 484 EKPYECNECEKAFSQKSYL-------------------------------IIHQRTHTEE 512

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
           +P++C  C K F +KS L  H+R+HTGE+PY C +C K F+ KS +  H+ +H G+KP+ 
Sbjct: 513 KPYKCNECGKAFREKSKLIIHQRIHTGEKPYECLVCWKAFSQKSQLIIHQRTHTGEKPYE 572

Query: 244 CTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           CT C   F  KS F VH RTH T    + C  CG++F + S LI HQ
Sbjct: 573 CTECGKAFREKSTFTVHQRTH-TGEKPYKCIECGKAFTQKSNLIVHQ 618

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|P17025|ZN182_HUMAN Zinc finger protein 182 OS=Homo sapiens GN=ZNF182 PE=1 SV=2

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/287 (43%), Positives = 160/287 (55%), Gaps = 37/287 (12%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
           H+G KP+ C  C  +F  K  L IH RTHTGE+P +C  C K F++KS L  H+R H   
Sbjct: 368 HTGKKPHECNECKKTFSDKSTLIIHQRTHTGEKPHKCTECGKSFNEKSTLIVHQRTHTGE 427

Query: 64  IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
             Y CD C  TFT K NL VH RTH+GE+P++C  C K FSQKS L  H+R      HT 
Sbjct: 428 KPYECDVCGKTFTQKSNLGVHQRTHSGEKPFECNECEKAFSQKSYLMLHQR-----GHTG 482

Query: 124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
           +KPY C  C+ AFS+K YL                                +H RTHT E
Sbjct: 483 EKPYECNECEKAFSQKSYL-------------------------------IIHQRTHTEE 511

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
           +P++C  C K F +KS L  H+R+HTGE+PY C +C K F+ KS +  H+ +H G+KP+ 
Sbjct: 512 KPYKCNECGKAFREKSKLIIHQRIHTGEKPYECPVCWKAFSQKSQLIIHQRTHTGEKPYA 571

Query: 244 CTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           CT C   F  KS F VH RT HT    + C  CG++F + S LI HQ
Sbjct: 572 CTECGKAFREKSTFTVHQRT-HTGEKPYKCTECGKAFTQKSNLIVHQ 617

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R9S5|ZN182_PONAB Zinc finger protein 182 OS=Pongo abelii GN=ZNF182 PE=2 SV=1

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/287 (43%), Positives = 160/287 (55%), Gaps = 37/287 (12%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
           H+G KP+ C  C  +F  K  L IH RTHTGE+P +C  C K F++KS L  H+R H   
Sbjct: 349 HTGKKPHECNECKKAFSDKSTLIIHQRTHTGEKPHKCTECGKSFNEKSTLIVHQRTHTGE 408

Query: 64  IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
             Y CD C  TFT K NL VH RTH+GE+P++C  C K FSQKS L  H+R      HT 
Sbjct: 409 KPYECDVCGKTFTQKSNLGVHQRTHSGEKPFECNECEKAFSQKSYLMLHQR-----GHTG 463

Query: 124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
           +KPY C  C+ AFS+K YL                                +H RTHT E
Sbjct: 464 EKPYECNECEKAFSQKSYL-------------------------------IIHQRTHTEE 492

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
           +P++C  C K F +KS L  H+R+HTGE+PY C +C K F+ KS +  H+ +H G+KP+ 
Sbjct: 493 KPYKCNECGKAFREKSKLIIHQRIHTGEKPYECPVCWKAFSQKSQLIIHQRTHTGEKPYA 552

Query: 244 CTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           CT C   F  KS F VH RT HT    + C  CG++F + S LI HQ
Sbjct: 553 CTECGKAFREKSTFTVHQRT-HTGEKPYKCTECGKAFTQKSNLIVHQ 598

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q6ZMW2|ZN782_HUMAN Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1

 Score =  233 bits (593), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/290 (43%), Positives = 165/290 (56%), Gaps = 9/290 (3%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            + H+G KPY C  CD +F  K  L IH RTHTGE+PF+C  C K F+ KS L  H+R H
Sbjct: 413 QRTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTH 472

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYL 120
                + C+ C  +F+    L  H RTHTGERPY+C+ C K F  KS L  H R      
Sbjct: 473 TGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRT----- 527

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
           HT +KPY C  C  AF +K  L  +H  +    +P   N+   A   +   + +VH RTH
Sbjct: 528 HTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKCNHCGEA--FSQKSNLRVHHRTH 584

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           TGE+P+QC  C K F QKS+L  H+R HTGE+PY C+ C K F+ KS +  H+ +H G+K
Sbjct: 585 TGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEK 644

Query: 241 PFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           P+ C  C   F+ KS   VH RT HT    + C+ CGR+F + S L  HQ
Sbjct: 645 PYNCNQCGEAFSQKSNLRVHQRT-HTGEKPYKCDKCGRTFSQKSSLREHQ 693

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZN57|ZFP2_HUMAN Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=2 SV=1

 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 166/313 (53%), Gaps = 27/313 (8%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            ++H+G KPY C  C  +F +   L +H RTHTGE+P+QC  C K F + S+L  H+R+H
Sbjct: 149 QRIHTGEKPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERIH 208

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYL 120
                Y C+ C   FT   NL VH RTHTGE+PY+C  C K FSQ   L  H+R H    
Sbjct: 209 TGEKPYKCNECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRSHTGEK 268

Query: 121 -----------------------HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSL 157
                                  HT +KPY C  C  +FS+  YL + H  + + ++P  
Sbjct: 269 PYECSQCGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYL-IEHQRLHSGVKPFE 327

Query: 158 GNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
            N    A    S  +   H R HTGE+P++C VC K FT +SSL  H+ +HTGE+PY C+
Sbjct: 328 CNECGKAFSKNSSLTQ--HRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECN 385

Query: 218 ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCG 277
            C K F+  +Y+  H+  H G+KP+ C  C   F   S   VH RT HT    + CN CG
Sbjct: 386 ECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRT-HTGEKPYQCNECG 444

Query: 278 RSFVRDSYLIRHQ 290
           ++F R + L RHQ
Sbjct: 445 KAFSRSTNLTRHQ 457

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Homo sapiens (taxid: 9606)

>sp|Q9Y6Q3|ZFP37_HUMAN Zinc finger protein 37 homolog OS=Homo sapiens GN=ZFP37 PE=2 SV=3

 Score =  229 bits (584), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 171/312 (54%), Gaps = 27/312 (8%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            ++H+G KPY C  C  +F +K +L +H RTHTGE+P++C+ C K    K AL  H R+H
Sbjct: 312 QRVHTGEKPYECNECGIAFSQKSHLVVHQRTHTGEKPYECIQCGKAHGHKHALTDHLRIH 371

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH---I 117
                Y C  C  TF    NL  H+R+HTGE+PY+C+ C K F   SSL  H R H   I
Sbjct: 372 TGEKPYECAECGKTFRHSSNLIQHVRSHTGEKPYECKECGKSFRYNSSLTEHVRTHTGEI 431

Query: 118 NY--------------------LHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSL 157
            Y                    +HT +KP+ C  C  AFS+K +L + H       +P  
Sbjct: 432 PYECNECGKAFKYSSSLTKHMRIHTGEKPFECNECGKAFSKKSHL-IIHQRTHTKEKPYK 490

Query: 158 GNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
            N    A   +S  ++  HMRTHTGE PF+C  C K F Q   L  H+RVHTGE+PY C+
Sbjct: 491 CNECGKAFGHSSSLTY--HMRTHTGESPFECNQCGKGFKQIEGLTQHQRVHTGEKPYECN 548

Query: 218 ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCG 277
            C K F+ KS++  H+ +H G+KP+ C  C   F +KSQ  +H R+ HT    + CN CG
Sbjct: 549 ECGKAFSQKSHLIVHQRTHTGEKPYECNECEKAFNAKSQLVIHQRS-HTGEKPYECNECG 607

Query: 278 RSFVRDSYLIRH 289
           ++F +++ L +H
Sbjct: 608 KTFKQNASLTKH 619

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q14587|ZN268_HUMAN Zinc finger protein 268 OS=Homo sapiens GN=ZNF268 PE=1 SV=2

 Score =  228 bits (582), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 125/292 (42%), Positives = 161/292 (55%), Gaps = 15/292 (5%)

Query: 2   KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
           ++H+G  PY C  C  +F RK  L  H RTH GE+P++C  C K F  KS L  H+R H 
Sbjct: 548 RIHTGENPYECHECGKAFSRKYQLISHQRTHAGEKPYECTDCGKAFGLKSQLIIHQRTHT 607

Query: 62  PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
               + C  C   F TK NL VH RTHTGE+PY C  C K F+ KS L  HK +     H
Sbjct: 608 GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPYSCNECGKAFTFKSQLIVHKGV-----H 662

Query: 122 TEDKPYHCTGCDAAFSRKQYLEV---NHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMR 178
           T  KPY C+ C   FS K  L V   +HT V        G    S  +L       +HMR
Sbjct: 663 TGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPYGCSECGKAFRSKSYLI------IHMR 716

Query: 179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG 238
           THTGE+P +C  C K F+  S L  H+R+HTGE PY C  C K F  K  + SH+ +H G
Sbjct: 717 THTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPYECSECGKAFNRKDQLISHQRTHAG 776

Query: 239 DKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           +KP+GC+ C   F+SKS   +H+RT H+    + CN CG++F+  S LI H+
Sbjct: 777 EKPYGCSECGKAFSSKSYLIIHMRT-HSGEKPYECNECGKAFIWKSLLIVHE 827

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P51814|ZNF41_HUMAN Zinc finger protein 41 OS=Homo sapiens GN=ZNF41 PE=1 SV=2

 Score =  228 bits (580), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 120/289 (41%), Positives = 168/289 (58%), Gaps = 9/289 (3%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            K+H+G KPY C+ C  +F ++  L  H+R HTGE+P++C  C K FSQ S L+ H++ H
Sbjct: 388 QKIHTGQKPYKCSECGKAFFQRSDLFRHLRIHTGEKPYECSECGKGFSQNSDLSIHQKTH 447

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYL 120
                Y C+ C   FT K  L +H R HTGE+PY C  C K F QKS  NTH+RI     
Sbjct: 448 TGEKHYECNECGKAFTRKSALRMHQRIHTGEKPYVCADCGKAFIQKSHFNTHQRI----- 502

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
           HT +KPY C+ C  +F++K  L V H  +    +P +   T   K  T   +   H +TH
Sbjct: 503 HTGEKPYECSDCGKSFTKKSQLHV-HQRIHTGEKPYI--CTECGKVFTHRTNLTTHQKTH 559

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           TGE+P+ CA C K FT +S+L  H++ HTGE+PY C+ C K F  KS +  H+ SH+G++
Sbjct: 560 TGEKPYMCAECGKAFTDQSNLIKHQKTHTGEKPYKCNGCGKAFIWKSRLKIHQKSHIGER 619

Query: 241 PFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRH 289
            + C  C   F  KS  +VH R  HT    +VC  CG++F++ S+ I H
Sbjct: 620 HYECKDCGKAFIQKSTLSVHQRI-HTGEKPYVCPECGKAFIQKSHFIAH 667

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
157105982	567	zinc finger protein [Aedes aegypti] gi|1	0.876	0.451	0.573	6e-95
357609605	1280	zinc finger protein [Danaus plexippus]	0.856	0.195	0.592	7e-92
328715046	392	PREDICTED: zinc finger protein 271-like	0.945	0.704	0.436	6e-64
193591726	536	PREDICTED: zinc finger protein 271-like	0.958	0.522	0.446	7e-64
328704791	339	PREDICTED: zinc finger protein 271-like	0.955	0.823	0.432	2e-63
301765518	929	PREDICTED: zinc finger protein 268-like	0.948	0.298	0.425	2e-62
328702980	414	PREDICTED: zinc finger protein 271-like,	0.945	0.666	0.443	3e-62
328702988	599	PREDICTED: zinc finger protein 271-like	0.952	0.464	0.453	8e-62
344292677	635	PREDICTED: zinc finger protein 182 [Loxo	0.948	0.436	0.465	2e-61
432953118	406	PREDICTED: oocyte zinc finger protein Xl	0.945	0.679	0.433	2e-61

>gi|157105982|ref|XP_001649111.1| zinc finger protein [Aedes aegypti] gi|108879937|gb|EAT44162.1| AAEL004444-PA [Aedes aegypti]

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 171/298 (57%), Positives = 210/298 (70%), Gaps = 42/298 (14%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
           MKLHSG KP+ CT CDA+FCRKPYLE+HMRTHTGERPF C VCLKRFSQKS+LNTHK++H
Sbjct: 84  MKLHSGTKPFACTVCDAAFCRKPYLEVHMRTHTGERPFSCDVCLKRFSQKSSLNTHKKIH 143

Query: 61  IPYIQ----YYCDACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKR 114
           + Y      + C+ C A+F  K  LE+H+RTH+GERP+ C  E C+KRFSQKS+LN HKR
Sbjct: 144 MRYWSIHKPFQCNQCSASFGRKPYLEIHLRTHSGERPFACDREGCDKRFSQKSTLNIHKR 203

Query: 115 IHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQ 174
           +H        +P+ C  C A F RK YL++                              
Sbjct: 204 VH----DPNHRPFTCEHCPATFCRKPYLDI------------------------------ 229

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRW 234
            H+R+HTGERPF+C  C KRF+Q+S+LN HKR+HTGERPYACDIC+K FAVKSYVT+HRW
Sbjct: 230 -HIRSHTGERPFECVTCLKRFSQRSTLNIHKRIHTGERPYACDICNKTFAVKSYVTAHRW 288

Query: 235 SHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK 292
           SHV +KP  C  C +TFTSKSQFA+H+RT H+ G N  C +CGR+F+RDSYLIRH N+
Sbjct: 289 SHVSEKPLNCDRCSMTFTSKSQFAIHIRT-HSAGQNFECRLCGRTFIRDSYLIRHNNR 345

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357609605|gb|EHJ66538.1| zinc finger protein [Danaus plexippus]

 Score =  343 bits (879), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 170/287 (59%), Positives = 200/287 (69%), Gaps = 37/287 (12%)

Query: 7    NKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH-IPYIQ 65
             +P+ C +C A+F  K YLEIH RTHTGERP+QC +CLKRF+QKS+LN HKR H +    
Sbjct: 935  GRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRP 994

Query: 66   YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDK 125
            + C  C A FT KQ LE+H RTHTGERPYQC+VC KRF+QKS+LN HKR H      + +
Sbjct: 995  FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHT----VQGR 1050

Query: 126  PYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERP 185
            PY C  C AAF+ K YLE+                               HMRTHTGERP
Sbjct: 1051 PYQCMECPAAFTCKPYLEI-------------------------------HMRTHTGERP 1079

Query: 186  FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
            F+C VC KRFTQKS+LN HKR+HTGERPYACDIC KRFAVKSYVT+HRWSHV DKP  C 
Sbjct: 1080 FECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCE 1139

Query: 246  SCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK 292
             C +TFTSKSQFA+H+RTH + G  + C+VCGR+FVRDSYLIRH N+
Sbjct: 1140 RCSMTFTSKSQFALHIRTHAS-GPCYECSVCGRTFVRDSYLIRHHNR 1185

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328715046|ref|XP_001949223.2| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  250 bits (638), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 128/293 (43%), Positives = 166/293 (56%), Gaps = 17/293 (5%)

Query: 2   KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
           + H+G KPY C  CD SF +   L  H RTHTG +PF C VC K FS+  +L  HKRMH 
Sbjct: 42  RTHTGEKPYACDVCDKSFGQPNNLTTHRRTHTGGKPFACDVCDKSFSENGSLTVHKRMHT 101

Query: 62  PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
               Y CD CD +F+   +L +H RTHTGE+PY C+VC+K FS+  +L  HKRI     H
Sbjct: 102 GEKPYACDVCDKSFSVSDSLTIHRRTHTGEKPYACDVCDKSFSENGNLTKHKRI-----H 156

Query: 122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQV----HM 177
           T +KPY C  CD +FS   +L  +  T         G   ++       FS       H 
Sbjct: 157 TGEKPYACDVCDKSFSLSHHLMTHRRT-------HTGEKPYACDVCDKSFSESGSLTKHQ 209

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHV 237
           RTHTGE+P+ C VC K F+  S L THKR+HTGE+PYACD+CDK F+  + +T+HR +H 
Sbjct: 210 RTHTGEKPYACDVCDKSFSISSGLTTHKRIHTGEKPYACDVCDKSFSQPNNLTTHRRTHT 269

Query: 238 GDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           G+KPF C  C  +F+      VH R  HT    + C+VC  SF       +HQ
Sbjct: 270 GEKPFACDVCDKSFSENGSLTVHKRM-HTGEKPYACDVCDMSFSESGSFTKHQ 321

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193591726|ref|XP_001944018.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  250 bits (638), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 129/289 (44%), Positives = 171/289 (59%), Gaps = 9/289 (3%)

Query: 2   KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
           + H+G KPY C  CD SF     L+ H RTHTGE+  QC VC K FS  S+L  H+R H 
Sbjct: 209 RTHTGEKPYQCDVCDKSFSNNGDLKRHQRTHTGEKSHQCDVCDKSFSVSSSLTKHRRTHT 268

Query: 62  PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
               Y CD CD +FT    L +H RTHTGE+PYQC+VC+K FS    L  H+R     +H
Sbjct: 269 GEKPYQCDVCDKSFTVSSQLTMHRRTHTGEKPYQCDVCDKSFSHSGHLTNHRR-----MH 323

Query: 122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
           T DKPY C  CD +F     L + H       +P + +    +  ++S  +  +H RTHT
Sbjct: 324 TGDKPYFCDVCDKSFINSGAL-IKHRRTHTREKPYICDVCDMSFSVSSSLT--IHRRTHT 380

Query: 182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
           GE+P+QC VC K F+   +L  H+R HTGE+PY CD+CD  F+V S +T HR +H G+KP
Sbjct: 381 GEKPYQCDVCDKSFSNNGALIKHRRTHTGEKPYICDVCDMSFSVSSSLTKHRRTHTGEKP 440

Query: 242 FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           + C  C  +FT  SQ  +H RT HT    + C+VC +SF+  S LIRH+
Sbjct: 441 YQCDVCDKSFTVSSQLTMHRRT-HTGDKPYFCDVCDKSFINSSALIRHR 488

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328704791|ref|XP_003242604.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/296 (43%), Positives = 172/296 (58%), Gaps = 17/296 (5%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            + H+G KPY C  CD SF +   L  H RTHTGE+P+ C VC K FSQ S L +H+R H
Sbjct: 53  QRTHTGEKPYPCDVCDKSFSQSSGLTSHQRTHTGEKPYACDVCDKSFSQSSNLMSHQRTH 112

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYL 120
                Y CD CD +F    +L  H RTHTGE+PY C+VC+K FSQ S L  H+R      
Sbjct: 113 TGEKPYPCDVCDKSFAENSHLTTHRRTHTGEKPYACDVCDKSFSQSSVLTNHQRT----- 167

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHM--- 177
           HT +KPY C  CD +FS+     +N   +++  +   G   +        FS   H+   
Sbjct: 168 HTGEKPYACDVCDKSFSQ----SIN---LMSHQRTHTGEKPYPCDICDKSFSENSHLTTH 220

Query: 178 -RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
            RTHTGE+P+ C VC K F+Q S L  H+R HTG++PYACD+CDK F+V S++T HR +H
Sbjct: 221 RRTHTGEKPYACDVCDKSFSQSSGLTNHQRTHTGDKPYACDVCDKSFSVSSHLTRHRRTH 280

Query: 237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK 292
            G+KP+ C  C  +F++  +   H RT HT    + C+VC +SF     L RH+ K
Sbjct: 281 TGEKPYACHVCDKSFSTSGELTNHRRT-HTGEKPYACHVCDKSFSASGNLTRHRRK 335

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|301765518|ref|XP_002918203.1| PREDICTED: zinc finger protein 268-like [Ailuropoda melanoleuca]

 Score =  245 bits (625), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 125/294 (42%), Positives = 176/294 (59%), Gaps = 17/294 (5%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            ++H+G KPY C  C  +F +K  L +H R HTGE+P+QC +C K F++KS L  H+R+H
Sbjct: 554 QRIHTGEKPYVCAECGKAFSQKSDLVVHQRIHTGEKPYQCAICGKAFAKKSQLIVHQRIH 613

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYL 120
                Y C AC   F+ K +L VH RTHTGE+PY+C  C K FSQKSSL  H+R+     
Sbjct: 614 TGKKPYDCGACGKAFSEKFHLIVHQRTHTGEKPYECSECGKAFSQKSSLIIHQRV----- 668

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQ----VH 176
           HT +KPY C+ C  AFS+K  L ++            G   +  +     FS +    +H
Sbjct: 669 HTGEKPYECSECGKAFSQKSPLIIHQRI-------HTGEKPYECRECGKAFSQKSQLIIH 721

Query: 177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
            R HTGE+P++C  C K F +KS L  HKR+HTGE+PY C  C++ F+ K+ + +H+  H
Sbjct: 722 HRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLIH 781

Query: 237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
            G+KP+ CT C   F+ KSQ  +H RT HT    + C+ CG++F + S+LI HQ
Sbjct: 782 TGEKPYECTECGKAFSRKSQLIIHQRT-HTGEKPYKCSECGKAFCQKSHLIGHQ 834

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328702980|ref|XP_001947926.2| PREDICTED: zinc finger protein 271-like, partial [Acyrthosiphon pisum]

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/293 (44%), Positives = 165/293 (56%), Gaps = 17/293 (5%)

Query: 2   KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
           + H+G KPY C  CD  F     L IH RTHTGE+P+ C VC K F+Q + L  HKR H 
Sbjct: 71  RTHTGEKPYPCDVCDKWFSDNGQLTIHKRTHTGEKPYPCDVCDKSFAQSNNLTIHKRTHT 130

Query: 62  PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
               Y CD CD  F+  Q L VH RTHTGE+PY C+VC+K FS+   L  HKR      H
Sbjct: 131 GEKPYPCDVCDKWFSRNQQLTVHKRTHTGEKPYPCDVCDKTFSRSQQLTVHKRT-----H 185

Query: 122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQ----VHM 177
           T +KPY C  CD  FSR  +L ++  T         G   +        F+      VH 
Sbjct: 186 TGEKPYPCDVCDKTFSRNHHLTLHKRT-------HTGEKPYPCDVCDKWFAGSSELTVHR 238

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHV 237
           RTHTGE+P+ C VC K F Q ++L  HKR HTGE+PY CD+CDK FA  + +T HR +H 
Sbjct: 239 RTHTGEKPYPCDVCDKSFAQSNNLTIHKRTHTGEKPYPCDVCDKWFAGSNELTVHRRTHT 298

Query: 238 GDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           G+KP+ C  C  TF+   Q  VH RT HT    + C+VC +SF + + L  H+
Sbjct: 299 GEKPYPCDVCDKTFSQNQQLTVHKRT-HTEEKPYPCDVCDKSFAQSNNLTVHK 350

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328702988|ref|XP_001943799.2| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  243 bits (620), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 132/291 (45%), Positives = 171/291 (58%), Gaps = 13/291 (4%)

Query: 2   KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
           ++H+G KPY C  CD SF R  +L +H RTHTGE+PF C VC K FS+ S L  HKR H 
Sbjct: 225 RIHTGEKPYPCYVCDKSFRRNAHLTVHKRTHTGEKPFPCDVCNKSFSENSKLTAHKRTHT 284

Query: 62  PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
               Y CD CD +F+   NL VH RTHTGE+PY C+VC++ F + S L  HKR      H
Sbjct: 285 GEKPYPCDVCDKSFSQNGNLIVHRRTHTGEKPYPCDVCDRWFVKNSDLTVHKRS-----H 339

Query: 122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTS--LFSHQVHMRT 179
           T +KPY C  CD +F++   L V+  T     +     +     F+++  L SHQ   RT
Sbjct: 340 TGEKPYPCDICDKSFAQSSTLTVHKRTHTG--EKPYPCDVCDGSFISNSDLTSHQ---RT 394

Query: 180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGD 239
           HTGE+P+ C VC KRF QKS L  HKR HTGE+P+ CD+CDK F+    +T H+ +H G+
Sbjct: 395 HTGEKPYPCDVCDKRFCQKSQLTVHKRTHTGEKPFPCDVCDKWFSNNFQLTVHKRTHTGE 454

Query: 240 KPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           KPF C  C   F +  Q  VH RT HT    + C+VC + F R   L  H+
Sbjct: 455 KPFPCDVCDKWFGNNGQLTVHKRT-HTGEKPYPCDVCDKWFSRSHNLTVHK 504

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|344292677|ref|XP_003418052.1| PREDICTED: zinc finger protein 182 [Loxodonta africana]

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/286 (46%), Positives = 165/286 (57%), Gaps = 9/286 (3%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
           H+G KP+ C  C  +F  K  L IH RTHTGE+P +C+ C K F++KS L  H+R H   
Sbjct: 359 HTGKKPHECNECKKTFSDKSTLIIHQRTHTGEKPHKCIECGKSFNEKSTLIVHQRTHTGE 418

Query: 64  IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
             Y CD C  TFT K NL VH RTH+GE+P++C  C K FSQKS L  H+R      HT 
Sbjct: 419 KPYECDVCGKTFTQKSNLGVHQRTHSGEKPFECNECEKAFSQKSYLMLHQR-----GHTG 473

Query: 124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
           +KPY C  C+ AFS+K YL + H       +P   N    A    S     +H R HTGE
Sbjct: 474 EKPYECNECEKAFSQKSYL-IIHQRTHTEEKPYKCNECGKAFREKSKLI--IHQRIHTGE 530

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
           +P++C VC K F+QKS L  H+R HTGE+PYAC+ C K F  KS  T H+ +H G+KP+ 
Sbjct: 531 KPYECPVCWKAFSQKSQLIIHQRTHTGEKPYACNECGKAFREKSTFTVHQRTHTGEKPYK 590

Query: 244 CTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRH 289
           CT C   FT KS   VH RT HT    H CN C  S   +  L RH
Sbjct: 591 CTECGKAFTQKSNLIVHQRT-HTGKKAHECNRCQPSIDHNFLLTRH 635

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432953118|ref|XP_004085296.1| PREDICTED: oocyte zinc finger protein XlCOF6-like, partial [Oryzias latipes]

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 167/293 (56%), Gaps = 17/293 (5%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
           M+ H+G KP+ C  CD SF R  +L+IHMRTHTGE+PF C  C + FSQ S+LN+H R H
Sbjct: 60  MRTHTGEKPFTCKECDTSFSRISHLKIHMRTHTGEKPFSCKECKRSFSQISSLNSHMRTH 119

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYL 120
                +YC+ CD +F+   NL+ HMRTHTGE+P+ C+ C + FSQ S+L  H RI     
Sbjct: 120 TGEKPFYCEECDTSFSDSSNLKTHMRTHTGEKPFTCKECKRSFSQISNLKAHMRI----- 174

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSH----QVH 176
           HT +KP+ C  C   F    +L+V+       M+   G   ++ K     FS     + H
Sbjct: 175 HTGEKPFSCQECKKYFGNTSHLKVH-------MRTHTGEKPFTCKECKKSFSQIYDLKTH 227

Query: 177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
           MRTHTGE+PF C  C K F++KS L  H R HTGE+P+ C  CDK F+ KS +  H  +H
Sbjct: 228 MRTHTGEKPFTCKECDKSFSEKSKLKKHMRTHTGEKPFTCKECDKSFSEKSKLKKHMRTH 287

Query: 237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRH 289
            G+KPF C  C  +F+  S    H+R  HT      CN C  SF R   L  H
Sbjct: 288 TGEKPFTCKECDKSFSQISNLKSHMRI-HTGEKPFPCNKCDASFSRIPLLKTH 339

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
UNIPROTKB|J9NXK0	744	ZNF84 "Uncharacterized protein	0.941	0.369	0.437	1.5e-65
UNIPROTKB|I3LME5	604	ZNF300 "Uncharacterized protei	0.958	0.463	0.439	8.5e-65
UNIPROTKB|F5H630	737	ZNF84 "Zinc finger protein 84"	0.952	0.377	0.435	1.8e-64
UNIPROTKB|P51523	738	ZNF84 "Zinc finger protein 84"	0.952	0.376	0.435	1.8e-64
UNIPROTKB|E2RKW7	606	ZNF300 "Uncharacterized protei	0.958	0.462	0.432	2.9e-64
UNIPROTKB|D4A5T4	717	Zfp39 "Protein Zfp39" [Rattus	0.945	0.384	0.450	4.7e-64
UNIPROTKB|G3V1K9	567	ZNF782 "Zinc finger protein 78	0.958	0.493	0.435	6e-64
UNIPROTKB|H0Y892	688	ZNF782 "Zinc finger protein 78	0.958	0.406	0.435	6e-64
UNIPROTKB|Q6ZMW2	699	ZNF782 "Zinc finger protein 78	0.958	0.400	0.435	6e-64
UNIPROTKB|F5GWS1	568	ZNF300 "Zinc finger protein 30	0.958	0.492	0.432	6e-64

UNIPROTKB|J9NXK0 ZNF84 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 127/290 (43%), Positives = 173/290 (59%)

Query:     4 HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
             H+G KP+ C+ C  +F RK  L  H RTHTGE+P++C  C K FS+K +L  H+R+H   
Sbjct:   459 HTGEKPFVCSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGE 518

Query:    64 IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
               Y C  C   F  K +L  H RTHTGE+PY+C  C K F +KSSL TH+R H     T 
Sbjct:   519 KPYVCSECGKAFCQKSHLISHQRTHTGEKPYECTECGKAFGEKSSLATHQRTH-----TG 573

Query:   124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQP---SLGNNTWSAKFLTSLFSHQVHMRTH 180
             +KPY C  C+ AFS+K  L   H  +    +P   SL    +  K  + L  HQ   RTH
Sbjct:   574 EKPYGCRDCEKAFSQKSQLNT-HQRIHTGEKPYECSLCRKAFFEK--SELIRHQ---RTH 627

Query:   181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
             TGE+P++C+ C K F +KSSL  H+R HTGE+P+ C +C K F+ KS++  H+ +H G+K
Sbjct:   628 TGEKPYECSECGKAFREKSSLINHQRTHTGEKPFECSVCGKTFSRKSHLIPHQRTHTGEK 687

Query:   241 PFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             P+GC+ C   F+ KSQ   H R H T    + C+ CG++F + S LI HQ
Sbjct:   688 PYGCSECRKAFSQKSQLVNHQRIH-TGEKPYQCHECGKAFSQKSQLINHQ 736

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|I3LME5 ZNF300 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
 Identities = 127/289 (43%), Positives = 168/289 (58%)

Query:     2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
             + H+G KPY C+ C  +F +K  L IH R HTGE+P++C  C K FSQKS L  H+R+H 
Sbjct:   317 RTHTGEKPYECSECGKAFSQKSSLIIHQRVHTGEKPYECSECGKAFSQKSPLIIHQRIHT 376

Query:    62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
                 Y C  C   F+ K  L +H R HTGE+PY+C VC K F +KS L  HKRIH     
Sbjct:   377 GEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTVCGKAFCEKSHLIIHKRIH----- 431

Query:   122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
             T +KPY C  C+ AFSRK  L + H  +    +P     T   K  +      +H RTHT
Sbjct:   432 TGEKPYKCAQCEEAFSRKTEL-ITHHLIHTGEKPY--ECTECGKTFSRKSQLIIHQRTHT 488

Query:   182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
             GE+P++C  C K F QKS L  H+R+HTGE+PY C  C K F+ KS++  H+  H G+KP
Sbjct:   489 GEKPYKCNECGKAFCQKSHLIGHQRIHTGEKPYVCTECGKAFSQKSHLPGHQRIHTGEKP 548

Query:   242 FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             + CT C   F+ KS   +H R H T    + C VCG++F++ S L  HQ
Sbjct:   549 YICTECGKAFSQKSDLVLHQRIH-TGERPYRCAVCGKAFIQKSQLTVHQ 596

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F5H630 ZNF84 "Zinc finger protein 84" [Homo sapiens (taxid:9606)]

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 125/287 (43%), Positives = 169/287 (58%)

Query:     4 HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
             H+G KP+ C+ C  +F RK  L  H RTHTGE+P++C  C K FS+K +L  H+R+H   
Sbjct:   452 HTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGE 511

Query:    64 IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
               Y C  C   F  K +L  H RTHTGE+PY+C  C K F +KSSL TH+R H     T 
Sbjct:   512 KPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQRTH-----TG 566

Query:   124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
             +KPY C  C+ AFS+K  L   H  +    +P   +    A F  S      H+RTHTGE
Sbjct:   567 EKPYECRDCEKAFSQKSQLNT-HQRIHTGEKPYECSLCRKAFFEKSELIR--HLRTHTGE 623

Query:   184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
             +P++C  C K F +KSSL  H+R+HTGE+P+ C  C K F+ KS++  H+ +H G+KP+G
Sbjct:   624 KPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKPYG 683

Query:   244 CTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             C+ C   F+ KSQ   H R H T    + C  CG++F + S LI HQ
Sbjct:   684 CSECRKAFSQKSQLVNHQRIH-TGEKPYRCIECGKAFSQKSQLINHQ 729

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|P51523 ZNF84 "Zinc finger protein 84" [Homo sapiens (taxid:9606)]

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 125/287 (43%), Positives = 169/287 (58%)

Query:     4 HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
             H+G KP+ C+ C  +F RK  L  H RTHTGE+P++C  C K FS+K +L  H+R+H   
Sbjct:   453 HTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGE 512

Query:    64 IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
               Y C  C   F  K +L  H RTHTGE+PY+C  C K F +KSSL TH+R H     T 
Sbjct:   513 KPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQRTH-----TG 567

Query:   124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
             +KPY C  C+ AFS+K  L   H  +    +P   +    A F  S      H+RTHTGE
Sbjct:   568 EKPYECRDCEKAFSQKSQLNT-HQRIHTGEKPYECSLCRKAFFEKSELIR--HLRTHTGE 624

Query:   184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
             +P++C  C K F +KSSL  H+R+HTGE+P+ C  C K F+ KS++  H+ +H G+KP+G
Sbjct:   625 KPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKPYG 684

Query:   244 CTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             C+ C   F+ KSQ   H R H T    + C  CG++F + S LI HQ
Sbjct:   685 CSECRKAFSQKSQLVNHQRIH-TGEKPYRCIECGKAFSQKSQLINHQ 730

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0003677 "DNA binding" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|E2RKW7 ZNF300 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 125/289 (43%), Positives = 167/289 (57%)

Query:     2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
             + H+G KPY C+ C  +F +K  L IH R HTGE+P++C  C K FSQKS L  H+R+H 
Sbjct:   316 RTHTGEKPYECSECGKAFSQKSSLIIHQRVHTGEKPYECSDCGKAFSQKSPLIIHQRIHT 375

Query:    62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
                 Y C  C   F+ K  L +H R HTGE+PY+C  C K F +KS L  HKRIH     
Sbjct:   376 GEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIH----- 430

Query:   122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
             T +KPY C  C+ AFSRK  L + H  +    +P     T   K  +      +H RTHT
Sbjct:   431 TGEKPYKCAQCEEAFSRKTEL-ITHQLIHTGEKPY--ECTECGKTFSRKSQLIIHQRTHT 487

Query:   182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
             GE+P++C+ C K F QKS L  H+R+HTGE+PY C  C K F+ KS++  H+  H G+KP
Sbjct:   488 GEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICSECGKAFSQKSHLPGHQRIHTGEKP 547

Query:   242 FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             + C  C   F+ KS   +H R H T    + C VCG++F++ S L  HQ
Sbjct:   548 YVCAECGKAFSQKSDLVLHQRIH-TGERPYRCTVCGKAFIQKSQLTVHQ 595

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|D4A5T4 Zfp39 "Protein Zfp39" [Rattus norvegicus (taxid:10116)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 132/293 (45%), Positives = 163/293 (55%)

Query:     2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
             K  +G KPY C  C  SF RK +L  H R HTGERP+ C  C K F  KS+L  H+R H 
Sbjct:   402 KTRAGYKPYRCNMCGKSFYRKSHLSRHQRIHTGERPYGCKECKKAFFHKSSLTIHQRTHT 461

Query:    62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
                 Y C  C  TF  K +L VH RTHTGE+PY+C+ C K F  KS L  H++IH     
Sbjct:   462 GEKPYECKKCRKTFYCKSDLNVHHRTHTGEKPYECDECRKTFYSKSHLIIHRKIH----- 516

Query:   122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF---SH-QVHM 177
             T DKPY C  C   F+RK  L V+  T         G   +        F   SH  +H 
Sbjct:   517 TGDKPYECQECQKTFNRKSNLTVHQKT-------HTGEKPYECDVCGKTFHRQSHLSMHQ 569

Query:   178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHV 237
               H+GE+P++C  C K F QKSSL+ H+R HTG+RPYAC+ C K F  KS +T H+ SH 
Sbjct:   570 GIHSGEKPYKCKECGKAFYQKSSLSRHQRNHTGDRPYACEECRKTFLHKSSLTVHQRSHT 629

Query:   238 GDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             G KP+ C  C  TF SKS   VH RTH T    + C +C ++F + SYL RHQ
Sbjct:   630 GYKPYSCEECRKTFYSKSHLTVHQRTH-TGEKPYECKLCRKAFHQKSYLSRHQ 681

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|G3V1K9 ZNF782 "Zinc finger protein 782" [Homo sapiens (taxid:9606)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 126/289 (43%), Positives = 165/289 (57%)

Query:     2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
             + H+G KPY C  CD +F  K  L IH RTHTGE+PF+C  C K F+ KS L  H+R H 
Sbjct:   282 RTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHT 341

Query:    62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
                 + C+ C  +F+    L  H RTHTGERPY+C+ C K F  KS L  H R H     
Sbjct:   342 GEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTH----- 396

Query:   122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
             T +KPY C  C  AF +K  L  +H  +    +P   N+   A   +   + +VH RTHT
Sbjct:   397 TGEKPYKCNQCGKAFGQKSQLRGHHR-IHTGEKPYKCNHCGEA--FSQKSNLRVHHRTHT 453

Query:   182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
             GE+P+QC  C K F QKS+L  H+R HTGE+PY C+ C K F+ KS +  H+ +H G+KP
Sbjct:   454 GEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKP 513

Query:   242 FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             + C  C   F+ KS   VH RTH T    + C+ CGR+F + S L  HQ
Sbjct:   514 YNCNQCGEAFSQKSNLRVHQRTH-TGEKPYKCDKCGRTFSQKSSLREHQ 561

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H0Y892 ZNF782 "Zinc finger protein 782" [Homo sapiens (taxid:9606)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 126/289 (43%), Positives = 165/289 (57%)

Query:     2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
             + H+G KPY C  CD +F  K  L IH RTHTGE+PF+C  C K F+ KS L  H+R H 
Sbjct:   403 RTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHT 462

Query:    62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
                 + C+ C  +F+    L  H RTHTGERPY+C+ C K F  KS L  H R H     
Sbjct:   463 GEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTH----- 517

Query:   122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
             T +KPY C  C  AF +K  L  +H  +    +P   N+   A   +   + +VH RTHT
Sbjct:   518 TGEKPYKCNQCGKAFGQKSQLRGHHR-IHTGEKPYKCNHCGEA--FSQKSNLRVHHRTHT 574

Query:   182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
             GE+P+QC  C K F QKS+L  H+R HTGE+PY C+ C K F+ KS +  H+ +H G+KP
Sbjct:   575 GEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKP 634

Query:   242 FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             + C  C   F+ KS   VH RTH T    + C+ CGR+F + S L  HQ
Sbjct:   635 YNCNQCGEAFSQKSNLRVHQRTH-TGEKPYKCDKCGRTFSQKSSLREHQ 682

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q6ZMW2 ZNF782 "Zinc finger protein 782" [Homo sapiens (taxid:9606)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 126/289 (43%), Positives = 165/289 (57%)

Query:     2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
             + H+G KPY C  CD +F  K  L IH RTHTGE+PF+C  C K F+ KS L  H+R H 
Sbjct:   414 RTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHT 473

Query:    62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
                 + C+ C  +F+    L  H RTHTGERPY+C+ C K F  KS L  H R H     
Sbjct:   474 GEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTH----- 528

Query:   122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
             T +KPY C  C  AF +K  L  +H  +    +P   N+   A   +   + +VH RTHT
Sbjct:   529 TGEKPYKCNQCGKAFGQKSQLRGHHR-IHTGEKPYKCNHCGEA--FSQKSNLRVHHRTHT 585

Query:   182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
             GE+P+QC  C K F QKS+L  H+R HTGE+PY C+ C K F+ KS +  H+ +H G+KP
Sbjct:   586 GEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKP 645

Query:   242 FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             + C  C   F+ KS   VH RTH T    + C+ CGR+F + S L  HQ
Sbjct:   646 YNCNQCGEAFSQKSNLRVHQRTH-TGEKPYKCDKCGRTFSQKSSLREHQ 693

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F5GWS1 ZNF300 "Zinc finger protein 300" [Homo sapiens (taxid:9606)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 125/289 (43%), Positives = 167/289 (57%)

Query:     2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
             + H+G KPY C+ C  +F +K  L IH R HTGE+P++C  C K FSQKS L  H+R+H 
Sbjct:   281 RTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYECSECGKAFSQKSPLIIHQRIHT 340

Query:    62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLH 121
                 Y C  C   F+ K  L +H R HTGE+PY+C  C K F +KS L  HKRIH     
Sbjct:   341 GEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIH----- 395

Query:   122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
             T +KPY C  C+ AFSRK  L + H  V    +P     T   K  +      +H RTHT
Sbjct:   396 TGEKPYKCAQCEEAFSRKTEL-ITHQLVHTGEKPY--ECTECGKTFSRKSQLIIHQRTHT 452

Query:   182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
             GE+P++C+ C K F QKS L  H+R+HTGE+PY C  C K F+ KS++  H+  H G+KP
Sbjct:   453 GEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKP 512

Query:   242 FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             + C  C   F+ KS   +H R H T    + C +CG++F++ S L  HQ
Sbjct:   513 YICAECGKAFSQKSDLVLHQRIH-TGERPYQCAICGKAFIQKSQLTVHQ 560

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	292
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	9e-05
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	7e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.001
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002
cd11674	1166	cd11674, lambda-1, inner capsid protein lambda-1 o	0.002

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 38.5 bits (90), Expect = 9e-05
 Identities = 18/26 (69%), Positives = 20/26 (76%)

Query: 80  NLEVHMRTHTGERPYQCEVCNKRFSQ 105
           NL  HMRTHTGE+PY+C VC K FS 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.2 bits (84), Expect = 7e-04
 Identities = 14/26 (53%), Positives = 20/26 (76%)

Query: 172 SHQVHMRTHTGERPFQCAVCSKRFTQ 197
           + + HMRTHTGE+P++C VC K F+ 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 16/26 (61%), Positives = 19/26 (73%)

Query: 24 YLEIHMRTHTGERPFQCVVCLKRFSQ 49
           L  HMRTHTGE+P++C VC K FS 
Sbjct: 1  NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 200 SLNTHKRVHTGERPYACDICDKRFA 224
           +L  H R HTGE+PY C +C K F+
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFS 25

Length = 26

>gnl|CDD|212564 cd11674, lambda-1, inner capsid protein lambda-1 or VP3

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)

Query: 224 AVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGAN 270
             K     +  S+V      C  C   F+S  Q A H RT H++GA+
Sbjct: 62  QSKKATPINPSSYV------CNVCMAEFSSMDQLAEHQRTTHSIGAS 102

The reovirus inner capsid protein lambda-1 displays nucleoside triphosphate phosphohydrolase (NTPase), RNA-5'-triphosphatase (RTPase), and RNA helicase activity and may play a role in the transcription of the virus genome, the unwinding or reannealing of double-stranded RNA during RNA synthesis. The RTPase activity constitutes the first step in the capping of RNA, resulting in a 5'-diphosphorylated RNA plus-strand. lambda1 is an Orthoreovirus core protein, VP3 is the homologous core protein in Aquareoviruses. Length = 1166

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	292
KOG2462|consensus	279		100.0
KOG2462|consensus	279		99.98
KOG1074|consensus	958		99.97
KOG3608|consensus	467		99.97
KOG3608|consensus	467		99.96
KOG1074|consensus	958		99.95
KOG3623|consensus	1007		99.95
KOG3576|consensus	267		99.82
KOG3576|consensus	267		99.75
KOG3623|consensus	1007		99.7
PHA00733	128	hypothetical protein	99.48
PLN03086	567	PRLI-interacting factor K; Provisional	99.45
PHA00733	128	hypothetical protein	99.43
PLN03086	567	PRLI-interacting factor K; Provisional	99.41
PHA02768	55	hypothetical protein; Provisional	99.22
KOG3993|consensus	500		99.2
PHA02768	55	hypothetical protein; Provisional	99.2
KOG3993|consensus	500		99.02
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.0
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.97
PHA00732	79	hypothetical protein	98.79
PHA00616	44	hypothetical protein	98.75
PHA00732	79	hypothetical protein	98.74
PHA00616	44	hypothetical protein	98.65
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.54
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.34
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.28
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.25
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.19
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.15
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.09
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.03
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.99
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.95
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.93
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.9
smart00355	26	ZnF_C2H2 zinc finger.	97.42
smart00355	26	ZnF_C2H2 zinc finger.	97.4
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.39
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.36
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.32
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.31
PRK04860	160	hypothetical protein; Provisional	97.2
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.19
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.16
PRK04860	160	hypothetical protein; Provisional	97.13
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.02
KOG2231|consensus	669		96.94
KOG2785|consensus	390		96.84
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.82
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.71
KOG1146|consensus	1406		96.46
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.33
KOG2231|consensus	669		96.3
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.92
KOG1146|consensus	1406		95.9
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.8
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.48
COG5048	467	FOG: Zn-finger [General function prediction only]	95.37
KOG2785|consensus	390		95.31
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	95.22
COG5048	467	FOG: Zn-finger [General function prediction only]	94.78
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.72
KOG2893|consensus	341		94.59
KOG4173|consensus	253		94.27
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.2
KOG2482|consensus	423		93.62
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	93.09
COG4049	65	Uncharacterized protein containing archaeal-type C	92.81
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	92.63
KOG2893|consensus	341		92.61
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	92.31
KOG4173|consensus	253		92.13
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	91.85
COG4049	65	Uncharacterized protein containing archaeal-type C	91.68
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	91.25
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	90.34
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	89.95
COG1592	166	Rubrerythrin [Energy production and conversion]	89.09
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	88.63
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	88.47
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	88.16
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.51
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.48
PRK06266	178	transcription initiation factor E subunit alpha; V	87.41
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.8
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	86.54
KOG2186|consensus	276		86.38
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	86.22
PF05290	140	Baculo_IE-1: Baculovirus immediate-early protein (	86.13
KOG2482|consensus	423		85.97
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	85.85
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	85.41
PHA00626	59	hypothetical protein	85.15
COG1592	166	Rubrerythrin [Energy production and conversion]	85.11
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	85.05
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	85.0
smart00531	147	TFIIE Transcription initiation factor IIE.	84.8
smart00531	147	TFIIE Transcription initiation factor IIE.	84.59
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.4
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	84.11
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	83.95
PRK06266	178	transcription initiation factor E subunit alpha; V	82.7
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	82.57
KOG2186|consensus	276		80.57
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	80.42

>KOG2462|consensus

Probab=100.00  E-value=8.8e-35  Score=217.92  Aligned_cols=105  Identities=36%  Similarity=0.789  Sum_probs=97.5

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhh
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      .+.+.|++|||.|.+...|..|+++|+  -+++|.+|||.|.+.+.|+.|+++|+|||||.|+.|++.|+++++|+.||+
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ  236 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ  236 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH
Confidence            356889999999999999999999997  589999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCcccCCCCCCccChHHHHhhh
Q psy4830         263 THHTVGANHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       263 ~hh~~~~~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      +| .+.++|+|..|+|+|...+.|.+|.
T Consensus       237 TH-S~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  237 TH-SDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             hh-cCCccccCcchhhHHHHHHHHHHhh
Confidence            96 6778999999999999999999995

>KOG2462|consensus

Probab=99.98  E-value=2.4e-33  Score=210.23  Aligned_cols=137  Identities=34%  Similarity=0.687  Sum_probs=104.6

Q ss_pred             CceecCccccccCChHHHHHHHHHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCcchhhhhcchh
Q psy4830          92 RPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF  171 (292)
Q Consensus        92 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (292)
                      ..|.|+.||+.+.+.++|.+|.++|....  +.+.+.|..|++.|.+...|                             
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~--s~ka~~C~~C~K~YvSmpAL-----------------------------  177 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLD--SKKAFSCKYCGKVYVSMPAL-----------------------------  177 (279)
T ss_pred             Cceeccccccccccccccchhhccccccc--ccccccCCCCCceeeehHHH-----------------------------
Confidence            44677777777777777777777765432  34556777777777655544                             


Q ss_pred             hhhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCcccccc
Q psy4830         172 SHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTF  251 (292)
Q Consensus       172 ~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  251 (292)
                        ..|+++|+  -+++|.+|||.|....-|+-|+|+|+|||||.|+.|+|.|+.+++|+.||++|.+.|+|+|..|+|+|
T Consensus       178 --kMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsF  253 (279)
T KOG2462|consen  178 --KMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSF  253 (279)
T ss_pred             --hhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHH
Confidence              34555554  46788888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             CChhHHHHHhhh
Q psy4830         252 TSKSQFAVHLRT  263 (292)
Q Consensus       252 ~~~~~L~~H~~~  263 (292)
                      +.++.|..|...
T Consensus       254 sl~SyLnKH~ES  265 (279)
T KOG2462|consen  254 ALKSYLNKHSES  265 (279)
T ss_pred             HHHHHHHHhhhh
Confidence            888888888754

>KOG1074|consensus

Probab=99.97  E-value=1.2e-32  Score=233.35  Aligned_cols=84  Identities=29%  Similarity=0.618  Sum_probs=71.4

Q ss_pred             eecccccccCCChhHHHHHHHhcCCCCceecCccccccCChHHHHHHHHHhhcccCCCCCCccCC---CchhhhchhHHH
Q psy4830          66 YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT---GCDAAFSRKQYL  142 (292)
Q Consensus        66 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~---~C~~~f~~~~~l  142 (292)
                      -.|-+|-++..-++.|+.|.++|+||+||+|.+||+.|.++.+|+.|+-+|-.. +.-...+.|+   +|.+.|...-.|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~-p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAK-PPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccC-ccccccccCCchhhhcccccccccc
Confidence            469999999999999999999999999999999999999999999999887532 3334678899   999999988888


Q ss_pred             hhhhhhhh
Q psy4830         143 EVNHTTVL  150 (292)
Q Consensus       143 ~~~~~~~~  150 (292)
                      ..|...+.
T Consensus       685 pQhIriH~  692 (958)
T KOG1074|consen  685 PQHIRIHL  692 (958)
T ss_pred             cceEEeec
Confidence            77766654

>KOG3608|consensus

Probab=99.97  E-value=4.8e-31  Score=203.18  Aligned_cols=247  Identities=26%  Similarity=0.505  Sum_probs=205.5

Q ss_pred             CccC--CcchhhcCC-hhHHHHHHhhhcC----------------------------------CCCcccc--cchhhcCC
Q psy4830           9 PYHC--TACDASFCR-KPYLEIHMRTHTG----------------------------------ERPFQCV--VCLKRFSQ   49 (292)
Q Consensus         9 ~~~C--~~C~~~f~~-~~~l~~H~~~h~~----------------------------------~~~~~C~--~C~~~f~~   49 (292)
                      .+.|  ..|++...+ ..+|.+|.-.|.-                                  ...|.|.  .|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            3555  457777666 4788999765520                                  0125664  59999999


Q ss_pred             hhHHHHHHhhcCCC-------------cceec--ccccccCCChhHHHHHHHhcCCCCceecCccccccCChHHHHHHHH
Q psy4830          50 KSALNTHKRMHIPY-------------IQYYC--DACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKR  114 (292)
Q Consensus        50 ~~~l~~H~~~h~~~-------------~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  114 (292)
                      ...+..|+..|...             ..+.|  ..|-+.|.++..|++|++.|++++...|+.||..|.++..|..|.+
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            99999998877421             12445  4688999999999999999999999999999999999999999998


Q ss_pred             HhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCcchhhhhcchhhhhhhcccCCCCCCccccccccc
Q psy4830         115 IHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKR  194 (292)
Q Consensus       115 ~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~C~k~  194 (292)
                      .-..   ....+|.|..|.+.|.++..|..|...+.                                 .-|+|+.|+.+
T Consensus       229 Rqt~---l~~n~fqC~~C~KrFaTeklL~~Hv~rHv---------------------------------n~ykCplCdmt  272 (467)
T KOG3608|consen  229 RQTE---LNTNSFQCAQCFKRFATEKLLKSHVVRHV---------------------------------NCYKCPLCDMT  272 (467)
T ss_pred             hhhh---hcCCchHHHHHHHHHhHHHHHHHHHHHhh---------------------------------hcccccccccC
Confidence            7542   24568999999999999998876543322                                 24899999999


Q ss_pred             cCCchHHHHHHhh-hcCCCCccccccccccccchhhhhhhccccCCcceeCCc--cccccCChhHHHHHhhhhcCCC--C
Q psy4830         195 FTQKSSLNTHKRV-HTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFTSKSQFAVHLRTHHTVG--A  269 (292)
Q Consensus       195 f~~~~~L~~H~~~-h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~hh~~~--~  269 (292)
                      ....++|.+|++. |...+||+|+.|++.|.+.+.|.+|..+|+ +-.|.|..  |..+|.+..+|++|++.+|.+.  .
T Consensus       273 c~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~  351 (467)
T KOG3608|consen  273 CSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPI  351 (467)
T ss_pred             CCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCC
Confidence            9999999999986 778899999999999999999999999998 77899988  9999999999999999998554  4


Q ss_pred             CcccCCCCCCccChHHHHhhhcC
Q psy4830         270 NHVCNVCGRSFVRDSYLIRHQNK  292 (292)
Q Consensus       270 ~~~C~~C~~~f~~~~~l~~H~rk  292 (292)
                      +|.|..|++.|++-.+|.+|.+|
T Consensus       352 ~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  352 LYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             ceeeecchhhhccchhHHHHHHH
Confidence            69999999999999999999764

>KOG3608|consensus

Probab=99.96  E-value=1.8e-29  Score=194.53  Aligned_cols=222  Identities=29%  Similarity=0.575  Sum_probs=192.7

Q ss_pred             CccC--CcchhhcCChhHHHHHHhhhcC------------CCC-cccc--cchhhcCChhHHHHHHhhcCCCcceecccc
Q psy4830           9 PYHC--TACDASFCRKPYLEIHMRTHTG------------ERP-FQCV--VCLKRFSQKSALNTHKRMHIPYIQYYCDAC   71 (292)
Q Consensus         9 ~~~C--~~C~~~f~~~~~l~~H~~~h~~------------~~~-~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   71 (292)
                      .|.|  ..|+..|.+...|.+|...|..            ++| +.|.  .|.+.|.++..|++|++.|.+++...|+.|
T Consensus       134 ~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~C  213 (467)
T KOG3608|consen  134 NFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHC  213 (467)
T ss_pred             hhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchH
Confidence            3566  5799999999999999987742            112 4565  599999999999999999999999999999


Q ss_pred             cccCCChhHHHHHHHhcC--CCCceecCccccccCChHHHHHHHHHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhh
Q psy4830          72 DATFTTKQNLEVHMRTHT--GERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTV  149 (292)
Q Consensus        72 ~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~  149 (292)
                      |..|.++..|-.|++..+  ...+|.|..|.|.|.+...|..|+..|.+       -|+|+.|+.+....++|..|... 
T Consensus       214 g~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-------~ykCplCdmtc~~~ssL~~H~r~-  285 (467)
T KOG3608|consen  214 GELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN-------CYKCPLCDMTCSSASSLTTHIRY-  285 (467)
T ss_pred             HHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh-------cccccccccCCCChHHHHHHHHh-
Confidence            999999999999987654  56789999999999999999999999864       48999999999888888644321 


Q ss_pred             hcccCCCCCCCcchhhhhcchhhhhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc--cccccccch
Q psy4830         150 LAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKS  227 (292)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~  227 (292)
                                                   .|..++||+|+.|++.|.+.+.|.+|..+|. +-.|+|+.  |..+|.+..
T Consensus       286 -----------------------------rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~  335 (467)
T KOG3608|consen  286 -----------------------------RHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYT  335 (467)
T ss_pred             -----------------------------hhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHH
Confidence                                         4667899999999999999999999999998 67899998  999999999


Q ss_pred             hhhhhhcccc-CC--cceeCCccccccCChhHHHHHhhhhcCCC
Q psy4830         228 YVTSHRWSHV-GD--KPFGCTSCHLTFTSKSQFAVHLRTHHTVG  268 (292)
Q Consensus       228 ~L~~H~~~h~-~~--~~~~C~~C~~~f~~~~~L~~H~~~hh~~~  268 (292)
                      .|++|++.++ |.  -+|.|..|++.|++..+|.+|++..|.-.
T Consensus       336 q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~  379 (467)
T KOG3608|consen  336 QMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFR  379 (467)
T ss_pred             HHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhccc
Confidence            9999998765 44  57999999999999999999998877543

>KOG1074|consensus

Probab=99.95  E-value=1.8e-28  Score=208.20  Aligned_cols=193  Identities=25%  Similarity=0.458  Sum_probs=136.8

Q ss_pred             ceecCccccccCChHHHHHHHHHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCc-----chhhhh
Q psy4830          93 PYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNT-----WSAKFL  167 (292)
Q Consensus        93 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~  167 (292)
                      |..|-+|-++.+-.+.|+.|.++|     +|++||+|.+|+++|+++..|+.|+..+....... ....     .+.+-+
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtH-----tGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R-~q~ScP~~~ic~~kf  678 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTH-----TGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPAR-VQFSCPSTFICQKKF  678 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcc-----cCcCccccccccchhccccchhhcccccccCcccc-ccccCCchhhhcccc
Confidence            467999999999999999999985     59999999999999999999998876654332211 1111     111222


Q ss_pred             cchhhhhhhcccCCCC-C------------CccccccccccCCchHHHHHHhhhcC----------------CC----Cc
Q psy4830         168 TSLFSHQVHMRTHTGE-R------------PFQCAVCSKRFTQKSSLNTHKRVHTG----------------ER----PY  214 (292)
Q Consensus       168 ~~~~~~~~h~~~~~~~-~------------~~~C~~C~k~f~~~~~L~~H~~~h~~----------------~~----~~  214 (292)
                      .....++.|+++|.+. .            .-+|..|.+.|.....+..++..|.+                +.    +.
T Consensus       679 tn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~  758 (958)
T KOG1074|consen  679 TNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPP  758 (958)
T ss_pred             cccccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCc
Confidence            2234556777777622 1            23688888888887777777665521                12    45


Q ss_pred             cccccccccccchhhhhhhccc-----------------------cCC--------------------------------
Q psy4830         215 ACDICDKRFAVKSYVTSHRWSH-----------------------VGD--------------------------------  239 (292)
Q Consensus       215 ~C~~C~k~f~~~~~L~~H~~~h-----------------------~~~--------------------------------  239 (292)
                      .+..|+..+.....+..+-..+                       +++                                
T Consensus       759 ~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~  838 (958)
T KOG1074|consen  759 PENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLN  838 (958)
T ss_pred             cccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccc
Confidence            5666777665544443331100                       000                                


Q ss_pred             ---------------------------------------cceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCc
Q psy4830         240 ---------------------------------------KPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSF  280 (292)
Q Consensus       240 ---------------------------------------~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f  280 (292)
                                                             ....|.+||+.|.+.+.|..|+++| +++++|.|.+|++.|
T Consensus       839 eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTH-tg~KPF~C~fC~~aF  917 (958)
T KOG1074|consen  839 EGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTH-TGPKPFFCHFCEEAF  917 (958)
T ss_pred             cccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcC-CCCCCccchhhhhhh
Confidence                                                   0257999999999999999999995 889999999999999


Q ss_pred             cChHHHHhhhcC
Q psy4830         281 VRDSYLIRHQNK  292 (292)
Q Consensus       281 ~~~~~l~~H~rk  292 (292)
                      ..+.+|+.||.+
T Consensus       918 ttrgnLKvHMgt  929 (958)
T KOG1074|consen  918 TTRGNLKVHMGT  929 (958)
T ss_pred             hhhhhhhhhhcc
Confidence            999999999974

>KOG3623|consensus

Probab=99.95  E-value=4.8e-28  Score=202.57  Aligned_cols=106  Identities=32%  Similarity=0.744  Sum_probs=96.2

Q ss_pred             CccCCcchhhcCChhHHHHHHhhhc--CCCCcccccchhhcCChhHHHHHHhhcCCC-------------cceecccccc
Q psy4830           9 PYHCTACDASFCRKPYLEIHMRTHT--GERPFQCVVCLKRFSQKSALNTHKRMHIPY-------------IQYYCDACDA   73 (292)
Q Consensus         9 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------~~~~C~~C~~   73 (292)
                      ...|++|++.+.....|..|++.-+  .+..|.|..|.++|..+..|.+|+.+|.+.             ..|+|.+||+
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            3679999999999999999998643  456799999999999999999999998643             3599999999


Q ss_pred             cCCChhHHHHHHHhcCCCCceecCccccccCChHHHHHHHH
Q psy4830          74 TFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKR  114 (292)
Q Consensus        74 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  114 (292)
                      .|..+..|+.|+++|.|++||.|+.|+|.|+...++..|+-
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            99999999999999999999999999999999999999974

>KOG3576|consensus

Probab=99.82  E-value=1.7e-21  Score=139.35  Aligned_cols=111  Identities=29%  Similarity=0.605  Sum_probs=102.1

Q ss_pred             CCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHH
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVH  260 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  260 (292)
                      .+...|.|.+|+|.|....-|.+|++-|...+.|-|..||+.|.....|++|+++|+|.+||+|..|+|+|.++-+|..|
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            34567999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCC----------CCCcccCCCCCCccChHHHHhhhc
Q psy4830         261 LRTHHTV----------GANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       261 ~~~hh~~----------~~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      ++..|+.          .+.|+|+.||.+-.....+..|+.
T Consensus       193 l~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~  233 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLK  233 (267)
T ss_pred             HHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHH
Confidence            9988764          356899999999888888877753

>KOG3576|consensus

Probab=99.75  E-value=3.7e-19  Score=127.50  Aligned_cols=115  Identities=32%  Similarity=0.622  Sum_probs=63.5

Q ss_pred             CCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHHHHHHhcCCCCceecCccccccCChHHHHHHHH
Q psy4830          35 ERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKR  114 (292)
Q Consensus        35 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  114 (292)
                      ...|.|.+|++.|.-...|.+|++-|.+.+.+-|..||+.|.+.-.|++|+++|+|.+||+|..|+++|+..-+|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            34455666666666666666666666555556666666666666666666666666666666666666666666666654


Q ss_pred             Hhhc------ccCCCCCCccCCCchhhhchhHHHhhhhhhh
Q psy4830         115 IHIN------YLHTEDKPYHCTGCDAAFSRKQYLEVNHTTV  149 (292)
Q Consensus       115 ~h~~------~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~  149 (292)
                      .-..      +....++.|.|+.||.+-.....+..|...+
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~  235 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLH  235 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhc
Confidence            3211      1112344566666665555554444444333

>KOG3623|consensus

Probab=99.70  E-value=2.4e-18  Score=145.07  Aligned_cols=80  Identities=39%  Similarity=0.840  Sum_probs=73.9

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhh
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      +.+|.|+.|+|.|...++|.+|.--|+|.+||+|.+|.|.|+.+..|..|++.|.|||||.|..|+|.|+...++.+||.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            45699999999999999999999999999999999999999999999999999999999999999999999999999985

>PHA00733 hypothetical protein

Probab=99.48  E-value=2.6e-14  Score=99.33  Aligned_cols=81  Identities=17%  Similarity=0.304  Sum_probs=42.2

Q ss_pred             CCCccccccccccCCchHHHHH--Hh---hhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHH
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTH--KR---VHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQF  257 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H--~~---~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L  257 (292)
                      .+++.|.+|.+.|.+...|..+  ++   .+.+.+||.|+.||+.|.+...|..|++.|  +.+|.|++|+++|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            4556666666666555554444  11   122344555555555555555555555543  2345555555555555555


Q ss_pred             HHHhhhhc
Q psy4830         258 AVHLRTHH  265 (292)
Q Consensus       258 ~~H~~~hh  265 (292)
                      ..|+...|
T Consensus       116 ~~H~~~~h  123 (128)
T PHA00733        116 LDHVCKKH  123 (128)
T ss_pred             HHHHHHhc
Confidence            55555444

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.45  E-value=2.5e-13  Score=115.42  Aligned_cols=99  Identities=21%  Similarity=0.433  Sum_probs=82.9

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCC----------
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTS----------  253 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~----------  253 (292)
                      ..+.|+.|++.|. ...|..|+.+++  +++.|+ ||+.+ .+..|..|+.+|.+.+++.|+.|++.|..          
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            4478999999996 688999999985  789999 99755 67899999999999999999999999952          


Q ss_pred             hhHHHHHhhhhcCCCCCcccCCCCCCccChHHHHhhh
Q psy4830         254 KSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       254 ~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      .+.|..|..+.  +.+++.|..||+.+..+. |..|+
T Consensus       527 ~s~Lt~HE~~C--G~rt~~C~~Cgk~Vrlrd-m~~H~  560 (567)
T PLN03086        527 LRGMSEHESIC--GSRTAPCDSCGRSVMLKE-MDIHQ  560 (567)
T ss_pred             hhhHHHHHHhc--CCcceEccccCCeeeehh-HHHHH
Confidence            45899999884  678999999999887653 44454

>PHA00733 hypothetical protein

Probab=99.43  E-value=1e-13  Score=96.28  Aligned_cols=92  Identities=17%  Similarity=0.357  Sum_probs=75.9

Q ss_pred             chHHHHHHhhhcCCCCccccccccccccchhhhhh--h---ccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcc
Q psy4830         198 KSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH--R---WSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHV  272 (292)
Q Consensus       198 ~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H--~---~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~  272 (292)
                      ...|.++-..-...+++.|.+|++.|.....|..+  +   ..+.+++||.|+.||+.|.+..+|..|++.+   ..+|.
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h---~~~~~  101 (128)
T PHA00733         25 LEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT---EHSKV  101 (128)
T ss_pred             HHHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC---CcCcc
Confidence            45666665555557889999999999988777766  1   2344588999999999999999999999974   35799


Q ss_pred             cCCCCCCccChHHHHhhhcC
Q psy4830         273 CNVCGRSFVRDSYLIRHQNK  292 (292)
Q Consensus       273 C~~C~~~f~~~~~l~~H~rk  292 (292)
                      |++|++.|.....|.+|+++
T Consensus       102 C~~CgK~F~~~~sL~~H~~~  121 (128)
T PHA00733        102 CPVCGKEFRNTDSTLDHVCK  121 (128)
T ss_pred             CCCCCCccCCHHHHHHHHHH
Confidence            99999999999999999874

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.41  E-value=8.1e-13  Score=112.38  Aligned_cols=146  Identities=20%  Similarity=0.442  Sum_probs=107.1

Q ss_pred             eecccccccCCChhHHHHHHHhcCCCCceecCc--cccccCChHHHHHHHHHhhcccCCCCCCccCCCchhhhchhHHHh
Q psy4830          66 YYCDACDATFTTKQNLEVHMRTHTGERPYQCEV--CNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLE  143 (292)
Q Consensus        66 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~  143 (292)
                      -.|+.|..... ...|..|.... ....-.|+.  |+..|.. ..+.              ..+.|+.|++.|. ...|.
T Consensus       408 V~C~NC~~~i~-l~~l~lHe~~C-~r~~V~Cp~~~Cg~v~~r-~el~--------------~H~~C~~Cgk~f~-~s~Le  469 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHEAYC-SRHNVVCPHDGCGIVLRV-EEAK--------------NHVHCEKCGQAFQ-QGEME  469 (567)
T ss_pred             EECCCCCCccc-hhHHHHHHhhC-CCcceeCCcccccceeec-cccc--------------cCccCCCCCCccc-hHHHH
Confidence            46888877654 34566776432 233456874  8888843 2233              3357889988885 34443


Q ss_pred             hhhhhhhcccCCCCCCCcchhhhhcchhhhhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccccccc
Q psy4830         144 VNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRF  223 (292)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f  223 (292)
                                                     .|+.+++  .++.|+ ||+.+ .+..|..|+.+|.+++++.|+.|++.|
T Consensus       470 -------------------------------kH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        470 -------------------------------KHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             -------------------------------HHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence                                           4555543  679999 99755 679999999999999999999999999


Q ss_pred             cc----------chhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         224 AV----------KSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       224 ~~----------~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      ..          ...|..|..+. |.+++.|..||+.+.. ..|..|+...|.
T Consensus       515 ~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        515 QAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             ccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee-hhHHHHHHHhhc
Confidence            52          35899999885 9999999999999887 468889877664

>PHA02768 hypothetical protein; Provisional

Probab=99.22  E-value=3.2e-12  Score=72.74  Aligned_cols=42  Identities=19%  Similarity=0.453  Sum_probs=19.6

Q ss_pred             ccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYV  229 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L  229 (292)
                      |+|+.||+.|...++|..|+++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            444444444444444444444444  344444444444444433

>KOG3993|consensus

Probab=99.20  E-value=4.7e-12  Score=101.25  Aligned_cols=215  Identities=18%  Similarity=0.254  Sum_probs=119.3

Q ss_pred             CcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHHHHHHhcCCCCcee--cCcccc-ccCChHHHHHHH
Q psy4830          37 PFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQ--CEVCNK-RFSQKSSLNTHK  113 (292)
Q Consensus        37 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~--C~~C~~-~f~~~~~l~~H~  113 (292)
                      .|.|.+|...|.+...|.+|.-.-+-...|+|++|++.|.-..+|..|.++|.....-.  =..=.+ .-.+....+.=.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            37888888888888888888654444456888888888888888888888875321100  000000 000000000000


Q ss_pred             HHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCcchhhhhcchhhhhhhcccCCCCCCcccccccc
Q psy4830         114 RIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSK  193 (292)
Q Consensus       114 ~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~C~k  193 (292)
                      +   ......+.-|.|..|++.|.+..+|+.|..++..........-    +|..+.          ...-.+-|+.|+-
T Consensus       347 r---sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~----~f~~s~----------~~~l~~~~~~~a~  409 (500)
T KOG3993|consen  347 R---SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAP----KFLLSR----------VIPLMHFNQAVAT  409 (500)
T ss_pred             c---cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhccc----Ccchhh----------ccccccccccccc
Confidence            0   0011234468888888888888888888766654332221100    000000          0001133444444


Q ss_pred             ccCCchHHHHHHhhhcC-CCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCC
Q psy4830         194 RFTQKSSLNTHKRVHTG-ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVG  268 (292)
Q Consensus       194 ~f~~~~~L~~H~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~  268 (292)
                      .+...+.--.+...+.+ .....|++|+..+.++..--.+.+.-..+..|.|.+|.-+|.+...|.+|+...|..+
T Consensus       410 h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  410 HSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             ccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence            44433322222222221 1123467777777777666666666666777888899999998889998887776543

>PHA02768 hypothetical protein; Provisional

Probab=99.20  E-value=7.8e-12  Score=71.17  Aligned_cols=44  Identities=16%  Similarity=0.425  Sum_probs=41.0

Q ss_pred             CccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHH
Q psy4830         213 PYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFA  258 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  258 (292)
                      -|+|+.||+.|...+.|..|+++|+  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999998  7999999999999888775

>KOG3993|consensus

Probab=99.02  E-value=5.6e-11  Score=95.19  Aligned_cols=194  Identities=19%  Similarity=0.248  Sum_probs=124.2

Q ss_pred             cceecccccccCCChhHHHHHHHhcCCCCceecCccccccCChHHHHHHHHHhhcccCC---CCCCccCCCchhhhchhH
Q psy4830          64 IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHT---EDKPYHCTGCDAAFSRKQ  140 (292)
Q Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~---~~~~~~C~~C~~~f~~~~  140 (292)
                      ..|.|..|...|.+.-.|.+|.-.-.-.-.|+|+.|+|.|+-..+|..|.|.|--....   +..|-+     ....+. 
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k-----~~~~~r-  339 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPK-----QAVETR-  339 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChh-----hhhhhh-
Confidence            35899999999999999999964322233599999999999999999999997421100   011100     000000 


Q ss_pred             HHhhhhhhhhcccCCCCCCCcchhhhhcchhhhhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCCC--------
Q psy4830         141 YLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGER--------  212 (292)
Q Consensus       141 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~--------  212 (292)
                      .+          .+...                 + .-....+..|.|.+|++.|.+...|+.|+.+|....        
T Consensus       340 ae----------~~ea~-----------------r-sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~  391 (500)
T KOG3993|consen  340 AE----------VQEAE-----------------R-SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPK  391 (500)
T ss_pred             hh----------hhhcc-----------------c-cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccC
Confidence            00          00000                 0 000123347999999999999999999988875321        


Q ss_pred             ---------CccccccccccccchhhhhhhccccCC-cceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccC
Q psy4830         213 ---------PYACDICDKRFAVKSYVTSHRWSHVGD-KPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVR  282 (292)
Q Consensus       213 ---------~~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~  282 (292)
                               .+-|+.|+-.+...+.--.+...+.+. ..-.|+.|+-.+.++..--.+.+.-+ ....|.|.+|...|.+
T Consensus       392 f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~-~~q~f~~ky~~atfys  470 (500)
T KOG3993|consen  392 FLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGI-AEQGFTCKYCPATFYS  470 (500)
T ss_pred             cchhhcccccccccccccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccc-hhhccccccchHhhhc
Confidence                     133555555555444433443333322 23468889988888776666654422 3456899999999999


Q ss_pred             hHHHHhhhcC
Q psy4830         283 DSYLIRHQNK  292 (292)
Q Consensus       283 ~~~l~~H~rk  292 (292)
                      ..+|.+|++|
T Consensus       471 s~~ltrhin~  480 (500)
T KOG3993|consen  471 SPGLTRHINK  480 (500)
T ss_pred             CcchHhHhhh
Confidence            9999999864

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.00  E-value=1.8e-10  Score=56.24  Aligned_cols=24  Identities=54%  Similarity=1.146  Sum_probs=12.9

Q ss_pred             HHHHHhhhcCCCCccccccccccc
Q psy4830         201 LNTHKRVHTGERPYACDICDKRFA  224 (292)
Q Consensus       201 L~~H~~~h~~~~~~~C~~C~k~f~  224 (292)
                      |.+|+++|++++||.|++|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.97  E-value=2.1e-10  Score=55.99  Aligned_cols=24  Identities=33%  Similarity=0.880  Sum_probs=17.1

Q ss_pred             hhhhhccccCCcceeCCccccccC
Q psy4830         229 VTSHRWSHVGDKPFGCTSCHLTFT  252 (292)
Q Consensus       229 L~~H~~~h~~~~~~~C~~C~~~f~  252 (292)
                      |..|+++|+|++||.|+.|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            666777777777777777777765

...

>PHA00732 hypothetical protein

Probab=98.79  E-value=3.9e-09  Score=66.43  Aligned_cols=46  Identities=17%  Similarity=0.423  Sum_probs=38.4

Q ss_pred             Cccccccccccccchhhhhhhcc-ccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         213 PYACDICDKRFAVKSYVTSHRWS-HVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ||.|++||+.|.+...|..|++. |.+   +.|+.||++|.   .|..|+++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhccc
Confidence            68899999999999999999884 553   58999999997   588888765

>PHA00616 hypothetical protein

Probab=98.75  E-value=3.6e-09  Score=57.31  Aligned_cols=34  Identities=18%  Similarity=0.321  Sum_probs=23.5

Q ss_pred             CccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      ||+|+.||+.|..+++|.+|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4667777777777777777777777777766654

>PHA00732 hypothetical protein

Probab=98.74  E-value=5.8e-09  Score=65.63  Aligned_cols=48  Identities=27%  Similarity=0.594  Sum_probs=39.2

Q ss_pred             CccccccccccCCchHHHHHHhh-hcCCCCccccccccccccchhhhhhhccccC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRV-HTGERPYACDICDKRFAVKSYVTSHRWSHVG  238 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  238 (292)
                      ||.|+.||+.|.+.++|..|++. |.   ++.|+.||+.|.   .|..|..++.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            58899999999999999999984 54   358999999998   47888866543

>PHA00616 hypothetical protein

Probab=98.65  E-value=1.5e-08  Score=54.86  Aligned_cols=35  Identities=17%  Similarity=0.317  Sum_probs=28.8

Q ss_pred             CccCCcchhhcCChhHHHHHHhhhcCCCCcccccc
Q psy4830           9 PYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVC   43 (292)
Q Consensus         9 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   43 (292)
                      ||+|..||+.|...++|.+|++.|+|++++.|+.=
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            67888888888888888888888888888887653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.54  E-value=8.7e-08  Score=56.09  Aligned_cols=47  Identities=34%  Similarity=0.579  Sum_probs=28.9

Q ss_pred             eeCCccccccCChhHHHHHhhhhcCCC-CCcccCCCCCCccChHHHHhhhc
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTHHTVG-ANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~hh~~~-~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      |.||+|++ ..+...|..|+...|..+ +.+.||+|...+.  .+|..||+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~   50 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLN   50 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHH
Confidence            66777777 344566777766655543 3566777776544  36666654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.34  E-value=3.1e-07  Score=43.46  Aligned_cols=22  Identities=36%  Similarity=0.803  Sum_probs=15.0

Q ss_pred             eeCCccccccCChhHHHHHhhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      |.|+.|++.|.++.+|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5666777777777777777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.28  E-value=6.9e-07  Score=52.28  Aligned_cols=20  Identities=40%  Similarity=0.609  Sum_probs=9.8

Q ss_pred             ccccccccccCCchHHHHHHh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKR  206 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~  206 (292)
                      |.||+|++ ..+...|..|..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~   22 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCE   22 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHH
Confidence            45555555 233445555543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.25  E-value=5.4e-07  Score=42.63  Aligned_cols=23  Identities=43%  Similarity=1.003  Sum_probs=15.5

Q ss_pred             ccccccccccCCchHHHHHHhhh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            46777777777777777776653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.19  E-value=1.2e-06  Score=41.88  Aligned_cols=24  Identities=50%  Similarity=0.962  Sum_probs=16.5

Q ss_pred             eeCCccccccCChhHHHHHhhhhc
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      |.|++|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777777764

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.15  E-value=1.3e-06  Score=58.76  Aligned_cols=73  Identities=23%  Similarity=0.422  Sum_probs=21.9

Q ss_pred             cccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         187 QCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       187 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +|..|+..|.+...|..|+...++-..-    ....+.....+..+...-. ...+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5899999999999999999765543211    1222234444444443322 23699999999999999999999975

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.09  E-value=2e-06  Score=42.42  Aligned_cols=25  Identities=44%  Similarity=0.812  Sum_probs=17.8

Q ss_pred             ceeCCccccccCChhHHHHHhhhhc
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      ||.|..|++.|.+..+|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777776654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.03  E-value=2e-06  Score=57.84  Aligned_cols=71  Identities=20%  Similarity=0.330  Sum_probs=20.5

Q ss_pred             cccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccChHHHHhhhc
Q psy4830         215 ACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       215 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      +|.+|+..|.+...|..|+...++-..   + ....+.....|..+++..  ....+.|.+|++.|.+...|..||+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~~~--~~~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLRKK--VKESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             Ccccccccccccccccccccccccccc---c-cccccccccccccccccc--cCCCCCCCccCCCCcCHHHHHHHHc
Confidence            589999999999999999976655321   1 223334555666665542  3346999999999999999999996

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.99  E-value=1.9e-06  Score=67.18  Aligned_cols=22  Identities=27%  Similarity=0.854  Sum_probs=11.2

Q ss_pred             CCccccc--cccccccchhhhhhh
Q psy4830         212 RPYACDI--CDKRFAVKSYVTSHR  233 (292)
Q Consensus       212 ~~~~C~~--C~k~f~~~~~L~~H~  233 (292)
                      +||+|++  |.|.+++...|+-|+
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~  371 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHM  371 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhh
Confidence            4555544  555555555555554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.95  E-value=3e-06  Score=66.13  Aligned_cols=53  Identities=21%  Similarity=0.521  Sum_probs=45.6

Q ss_pred             CCcceeCCc--cccccCChhHHHHHhhhhc------------------CCCCCcccCCCCCCccChHHHHhhh
Q psy4830         238 GDKPFGCTS--CHLTFTSKSQFAVHLRTHH------------------TVGANHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       238 ~~~~~~C~~--C~~~f~~~~~L~~H~~~hh------------------~~~~~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      ++|||+|++  |+|++.+...|+-|+.-=|                  ...+||.|++|+|.|++...|+-|.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            459999988  9999999999999986433                  1347999999999999999998875

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.93  E-value=5.9e-06  Score=39.39  Aligned_cols=23  Identities=52%  Similarity=1.038  Sum_probs=14.2

Q ss_pred             ccccccccccCCchHHHHHHhhh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      |.|++|++.|.+...|+.|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45777777777777777776654

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.90  E-value=6.6e-06  Score=40.52  Aligned_cols=24  Identities=50%  Similarity=1.020  Sum_probs=14.3

Q ss_pred             CccccccccccCCchHHHHHHhhh
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      ||.|+.|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            355666666666666666666554

>smart00355 ZnF_C2H2 zinc finger

Probab=97.42  E-value=0.0001  Score=35.59  Aligned_cols=23  Identities=43%  Similarity=0.870  Sum_probs=17.5

Q ss_pred             eeCCccccccCChhHHHHHhhhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            46778888888888888887754

>smart00355 ZnF_C2H2 zinc finger

Probab=97.40  E-value=0.00014  Score=35.16  Aligned_cols=24  Identities=42%  Similarity=0.830  Sum_probs=15.6

Q ss_pred             ccccccccccCCchHHHHHHhhhc
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      |.|+.|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            456667777777777776666553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.39  E-value=0.00021  Score=39.76  Aligned_cols=30  Identities=20%  Similarity=0.456  Sum_probs=20.3

Q ss_pred             CCcceeCCccccccCChhHHHHHhhhhcCC
Q psy4830         238 GDKPFGCTSCHLTFTSKSQFAVHLRTHHTV  267 (292)
Q Consensus       238 ~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~  267 (292)
                      .+.|-.|++|+..+.+..+|.+|+...|..
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            467888999999999999999998877653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.36  E-value=0.00015  Score=34.37  Aligned_cols=23  Identities=35%  Similarity=0.836  Sum_probs=16.2

Q ss_pred             eeCCccccccCChhHHHHHhhhhc
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      |.|+.|+.... ...|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            67888887777 778888887765

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.32  E-value=0.00022  Score=39.66  Aligned_cols=32  Identities=25%  Similarity=0.600  Sum_probs=21.4

Q ss_pred             CCCCccccccccccCCchHHHHHHhhhcCCCC
Q psy4830         182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERP  213 (292)
Q Consensus       182 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  213 (292)
                      .+.|-.|++|+..+.+..+|++|+.+.++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45678899999999988999999888777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.31  E-value=0.00016  Score=34.75  Aligned_cols=22  Identities=36%  Similarity=0.816  Sum_probs=14.0

Q ss_pred             eeCCccccccCChhHHHHHhhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>PRK04860 hypothetical protein; Provisional

Probab=97.20  E-value=0.00018  Score=52.17  Aligned_cols=38  Identities=32%  Similarity=0.848  Sum_probs=28.3

Q ss_pred             CccccccccccCCchHHHHHHhhhcCCCCccccccccccccc
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVK  226 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~  226 (292)
                      +|.|. |+.   ...++.+|.++|.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            57787 776   666777888888887788888887777644

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.19  E-value=0.00024  Score=34.81  Aligned_cols=21  Identities=24%  Similarity=0.665  Sum_probs=14.9

Q ss_pred             cccCCCCCCccChHHHHhhhc
Q psy4830         271 HVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       271 ~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      |.|.+|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567777777777777777764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.16  E-value=0.00025  Score=34.02  Aligned_cols=22  Identities=41%  Similarity=0.907  Sum_probs=13.3

Q ss_pred             ccccccccccCCchHHHHHHhh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRV  207 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~  207 (292)
                      |.|++|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666554

>PRK04860 hypothetical protein; Provisional

Probab=97.13  E-value=0.00015  Score=52.56  Aligned_cols=37  Identities=27%  Similarity=0.630  Sum_probs=21.0

Q ss_pred             CccccccccccccchhhhhhhccccCCcceeCCccccccCC
Q psy4830         213 PYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTS  253 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~  253 (292)
                      +|.|. |+.   ....+..|.++|+++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            45665 555   44455566666666666666666655543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.02  E-value=0.00029  Score=34.53  Aligned_cols=22  Identities=32%  Similarity=0.789  Sum_probs=13.9

Q ss_pred             eeCCccccccCChhHHHHHhhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=96.94  E-value=0.0013  Score=57.93  Aligned_cols=69  Identities=22%  Similarity=0.467  Sum_probs=44.9

Q ss_pred             ccccccccccCCchHHHHHHhhhcCCCCcccccc------ccccccchhhhhhhccccCCcceeCC--ccc-cccCChhH
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC------DKRFAVKSYVTSHRWSHVGDKPFGCT--SCH-LTFTSKSQ  256 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C------~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~-~~f~~~~~  256 (292)
                      -.|..|...|.....|.+|++.++    |.|..|      +.-|.....|..|-+.++    |.|+  .|. +.|.....
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~~~  254 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVAFE  254 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccceeeehhH
Confidence            468888888988889988887654    445555      355667777887776544    6676  453 34444434


Q ss_pred             HHHHhh
Q psy4830         257 FAVHLR  262 (292)
Q Consensus       257 L~~H~~  262 (292)
                      +..+++
T Consensus       255 ~ei~lk  260 (669)
T KOG2231|consen  255 LEIELK  260 (669)
T ss_pred             HHHHHH
Confidence            444444

>KOG2785|consensus

Probab=96.84  E-value=0.0036  Score=50.87  Aligned_cols=111  Identities=19%  Similarity=0.258  Sum_probs=75.5

Q ss_pred             CCCCCccccccccccCCchHHHHHHhh--hc---------CC------CCcc-------------ccccccccccchhhh
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRV--HT---------GE------RPYA-------------CDICDKRFAVKSYVT  230 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~--h~---------~~------~~~~-------------C~~C~k~f~~~~~L~  230 (292)
                      .++-++.|.+|.+.|.+......|+..  |.         ++      ....             +..+...+.......
T Consensus        64 ~~~~~~~c~~c~k~~~s~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~  143 (390)
T KOG2785|consen   64 EAESVVYCEACNKSFASPKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSE  143 (390)
T ss_pred             hcccceehHHhhccccChhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccch
Confidence            355678999999999999999999753  21         00      0111             333333333322222


Q ss_pred             hhhccc------------cCCcceeCCccccccCChhHHHHHhhhhcC----------------------CCCCcccCCC
Q psy4830         231 SHRWSH------------VGDKPFGCTSCHLTFTSKSQFAVHLRTHHT----------------------VGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h------------~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~----------------------~~~~~~C~~C  276 (292)
                      .+...-            ...-|-.|-.|++.|.+...-..||-.+|+                      .+..|.|-.|
T Consensus       144 e~~~dd~~Edi~~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~C  223 (390)
T KOG2785|consen  144 EEEEDDEEEDIEEDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFC  223 (390)
T ss_pred             hhccCcchhhhhhccchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEe
Confidence            322110            112357899999999999999999999885                      2345789999


Q ss_pred             C---CCccChHHHHhhhc
Q psy4830         277 G---RSFVRDSYLIRHQN  291 (292)
Q Consensus       277 ~---~~f~~~~~l~~H~r  291 (292)
                      +   +.|.+-...+.||+
T Consensus       224 N~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  224 NELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             ccccCcccccHHHHHHHh
Confidence            9   99999999999996

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.82  E-value=0.00085  Score=31.75  Aligned_cols=23  Identities=35%  Similarity=0.700  Sum_probs=13.4

Q ss_pred             ccccccccccCCchHHHHHHhhhc
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      |+|+.|+.... ...|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666766665 666666666654

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.71  E-value=0.0016  Score=51.91  Aligned_cols=99  Identities=24%  Similarity=0.500  Sum_probs=53.0

Q ss_pred             ccccc--cccccCCchHHHHHHhhhcCCCCcccccccc---ccc------cchhhhhhhccccCCcce----eCCccccc
Q psy4830         186 FQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDK---RFA------VKSYVTSHRWSHVGDKPF----GCTSCHLT  250 (292)
Q Consensus       186 ~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k---~f~------~~~~L~~H~~~h~~~~~~----~C~~C~~~  250 (292)
                      |.|+.  |..+...-..|..|.++-++  .+.|.+|-.   .|.      ++..|+.|...-..+.-|    .|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            55653  55555555566667665443  244555532   222      345566665443222111    47777777


Q ss_pred             cCChhHHHHHhhhhcCCCCCcccCCCCCC-------ccChHHHHhhhc
Q psy4830         251 FTSKSQFAVHLRTHHTVGANHVCNVCGRS-------FVRDSYLIRHQN  291 (292)
Q Consensus       251 f~~~~~L~~H~~~hh~~~~~~~C~~C~~~-------f~~~~~l~~H~r  291 (292)
                      |.+-..|..|+|..|.     .|-+|+++       |.+-.+|..|.+
T Consensus       230 FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~  272 (493)
T COG5236         230 FYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFR  272 (493)
T ss_pred             ecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhh
Confidence            7777777777766543     25555543       555566666644

>KOG1146|consensus

Probab=96.46  E-value=0.0012  Score=61.83  Aligned_cols=104  Identities=20%  Similarity=0.376  Sum_probs=77.2

Q ss_pred             ccccccccCCchHHHHHHhh-hcCCCCccccccccccccchhhhhhhcccc-------------------------CCcc
Q psy4830         188 CAVCSKRFTQKSSLNTHKRV-HTGERPYACDICDKRFAVKSYVTSHRWSHV-------------------------GDKP  241 (292)
Q Consensus       188 C~~C~k~f~~~~~L~~H~~~-h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-------------------------~~~~  241 (292)
                      |..|+..+.....+..|+.+ +.-.+.|+|+.|+..|.....|..|+++-+                         +.++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            44455556666666666543 555678999999999999999999998721                         2358


Q ss_pred             eeCCccccccCChhHHHHHhhhhcC------------------------------------------CCCCcccCCCCCC
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTHHT------------------------------------------VGANHVCNVCGRS  279 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~hh~------------------------------------------~~~~~~C~~C~~~  279 (292)
                      |.|..|..++..+.+|.+|++.--.                                          ....+.|.+|++.
T Consensus       519 ~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~ye  598 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYE  598 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcch
Confidence            9999999999999999999864210                                          0124789999998


Q ss_pred             ccChHHHHhhhc
Q psy4830         280 FVRDSYLIRHQN  291 (292)
Q Consensus       280 f~~~~~l~~H~r  291 (292)
                      -.-..+|..||.
T Consensus       599 tniarnlrihmt  610 (1406)
T KOG1146|consen  599 TNIARNLRIHMT  610 (1406)
T ss_pred             hhhhhccccccc
Confidence            888888888874

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.33  E-value=0.0029  Score=30.18  Aligned_cols=20  Identities=25%  Similarity=0.906  Sum_probs=15.0

Q ss_pred             ccccccccccCCchHHHHHHh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKR  206 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~  206 (292)
                      .+|+.||+.| ..+.|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4688888888 6677888765

>KOG2231|consensus

Probab=96.30  E-value=0.0045  Score=54.70  Aligned_cols=89  Identities=24%  Similarity=0.414  Sum_probs=50.5

Q ss_pred             CCchHHHHHHh-hhcCCCCcccccccc---------ccccchhhhhhhccccC-Cc----ceeCCccccccCChhHHHHH
Q psy4830         196 TQKSSLNTHKR-VHTGERPYACDICDK---------RFAVKSYVTSHRWSHVG-DK----PFGCTSCHLTFTSKSQFAVH  260 (292)
Q Consensus       196 ~~~~~L~~H~~-~h~~~~~~~C~~C~k---------~f~~~~~L~~H~~~h~~-~~----~~~C~~C~~~f~~~~~L~~H  260 (292)
                      .+...|+.|+. .|.   .+.|.+|-.         .--+...|..|+..--. ++    .-.|..|...|.....|..|
T Consensus       125 ~s~~~Lk~H~~~~H~---~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH  201 (669)
T KOG2231|consen  125 KSVENLKNHMRDQHK---LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRH  201 (669)
T ss_pred             hHHHHHHHHHHHhhh---hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHh
Confidence            36777888874 342   233443321         22234556666543211 11    12577788888888888888


Q ss_pred             hhhhcCCCCCcccCCC------CCCccChHHHHhhhcC
Q psy4830         261 LRTHHTVGANHVCNVC------GRSFVRDSYLIRHQNK  292 (292)
Q Consensus       261 ~~~hh~~~~~~~C~~C------~~~f~~~~~l~~H~rk  292 (292)
                      ++..|     |.|.+|      +..|..-..|..|.|+
T Consensus       202 ~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  202 LRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             hccce-----eheeecCcccccchhcccchHHHHHhhh
Confidence            77665     345555      3556667777777653

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.92  E-value=0.0063  Score=29.02  Aligned_cols=19  Identities=21%  Similarity=0.557  Sum_probs=10.5

Q ss_pred             eCCccccccCChhHHHHHhh
Q psy4830         243 GCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       243 ~C~~C~~~f~~~~~L~~H~~  262 (292)
                      .|+.||+.| ..+.|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455666666 4455555544

>KOG1146|consensus

Probab=95.90  E-value=0.0034  Score=58.95  Aligned_cols=76  Identities=20%  Similarity=0.344  Sum_probs=61.4

Q ss_pred             ccccccccccchhhhhhhc-cccCCcceeCCccccccCChhHHHHHhhhhcC------------------------CCCC
Q psy4830         216 CDICDKRFAVKSYVTSHRW-SHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT------------------------VGAN  270 (292)
Q Consensus       216 C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~------------------------~~~~  270 (292)
                      |.-|+..+.++..+..|+. .+.-.+.|+|+.|+..|.....|..|||..|.                        .+++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            4445566666666766654 45666899999999999999999999998542                        3367


Q ss_pred             cccCCCCCCccChHHHHhhhc
Q psy4830         271 HVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       271 ~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      |.|..|..+++.+.+|.+||.
T Consensus       519 ~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHH
Confidence            999999999999999999985

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.80  E-value=0.0074  Score=31.48  Aligned_cols=21  Identities=19%  Similarity=0.529  Sum_probs=12.4

Q ss_pred             CcccCCCCCCccChHHHHhhh
Q psy4830         270 NHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       270 ~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      +|.|++|++.|.+...+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            355666666666666666554

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.48  E-value=0.011  Score=30.82  Aligned_cols=23  Identities=35%  Similarity=0.714  Sum_probs=18.3

Q ss_pred             ceeCCccccccCChhHHHHHhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +|.|++|++.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.37  E-value=0.0055  Score=52.98  Aligned_cols=53  Identities=32%  Similarity=0.767  Sum_probs=41.9

Q ss_pred             ceecccccccCCChhHHHHHHH--hcCCC--CceecC--ccccccCChHHHHHHHHHhh
Q psy4830          65 QYYCDACDATFTTKQNLEVHMR--THTGE--RPYQCE--VCNKRFSQKSSLNTHKRIHI  117 (292)
Q Consensus        65 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~  117 (292)
                      ++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccccc
Confidence            5678888888888888888888  68888  788888  68888888888877777654

>KOG2785|consensus

Probab=95.31  E-value=0.067  Score=43.82  Aligned_cols=76  Identities=21%  Similarity=0.380  Sum_probs=44.9

Q ss_pred             CcccccchhhcCChhHHHHHHhh--cC-------CCcceecccccccCCChhHHHHHHH---hcCCCCceecCccccccC
Q psy4830          37 PFQCVVCLKRFSQKSALNTHKRM--HI-------PYIQYYCDACDATFTTKQNLEVHMR---THTGERPYQCEVCNKRFS  104 (292)
Q Consensus        37 ~~~C~~C~~~f~~~~~l~~H~~~--h~-------~~~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C~~~f~  104 (292)
                      .|.|.-|...|.+...-+.|+++  |.       ...|   ++=-..|..+..-..-..   .-.++.++.|.+|.+.|.
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lP---PItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~   79 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLP---PITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFA   79 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCC---CcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhcccc
Confidence            47899999999998888888753  21       0111   111122222211111100   123455788999999999


Q ss_pred             ChHHHHHHHHH
Q psy4830         105 QKSSLNTHKRI  115 (292)
Q Consensus       105 ~~~~l~~H~~~  115 (292)
                      +......|+..
T Consensus        80 s~~a~~~hl~S   90 (390)
T KOG2785|consen   80 SPKAHENHLKS   90 (390)
T ss_pred             ChhhHHHHHHH
Confidence            98888888764

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=95.22  E-value=0.015  Score=29.82  Aligned_cols=10  Identities=60%  Similarity=1.185  Sum_probs=6.1

Q ss_pred             CCcccCCCCC
Q psy4830         269 ANHVCNVCGR  278 (292)
Q Consensus       269 ~~~~C~~C~~  278 (292)
                      .++.|++||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4566666665

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.78  E-value=0.013  Score=50.72  Aligned_cols=107  Identities=29%  Similarity=0.513  Sum_probs=79.8

Q ss_pred             CCccccccccccCCchHHHHHHh--hhcCC--CCcccc--ccccccccchhhhhhhccccCCcceeCCc--cccccC---
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKR--VHTGE--RPYACD--ICDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFT---  252 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~---  252 (292)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.+...+..|...|.+..++.+..  +...+.   
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            46899999999999999999999  89999  999999  89999999999999999998776655533  333333   


Q ss_pred             --------------------------------ChhHHHHHhhhhcCCC--CCcccCCCCCCccChHHHHhhhc
Q psy4830         253 --------------------------------SKSQFAVHLRTHHTVG--ANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       253 --------------------------------~~~~L~~H~~~hh~~~--~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                                                      ....+..|...+ ...  ..+.+..|.+.|.....+..|++
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITH-LSFRPYNCKNPPCSKSFNRHYNLIPHKK  439 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccc-cccCCcCCCCCcchhhccCccccccccc
Confidence                                            333333333222 111  24667888888888888877765

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.72  E-value=0.036  Score=44.53  Aligned_cols=99  Identities=24%  Similarity=0.479  Sum_probs=56.7

Q ss_pred             ccCC--cchhhcCChhHHHHHHhhhcCCCCcccccchh---hcC------ChhHHHHHHhhcCCCcc----eeccccccc
Q psy4830          10 YHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVVCLK---RFS------QKSALNTHKRMHIPYIQ----YYCDACDAT   74 (292)
Q Consensus        10 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~---~f~------~~~~l~~H~~~h~~~~~----~~C~~C~~~   74 (292)
                      |.|+  .|..+-.....|..|.+..++  .+-|.+|-.   .|.      ++..|..|...-..+..    -.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            5665  366666667778888876544  245666532   222      23455566543322211    257777777


Q ss_pred             CCChhHHHHHHHhcCCCCceecCcccc-------ccCChHHHHHHHH
Q psy4830          75 FTTKQNLEVHMRTHTGERPYQCEVCNK-------RFSQKSSLNTHKR  114 (292)
Q Consensus        75 f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~  114 (292)
                      |.+...|..|++..+.    .|-+|++       -|.+..+|..|.+
T Consensus       230 FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~  272 (493)
T COG5236         230 FYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFR  272 (493)
T ss_pred             ecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhh
Confidence            7777777777765442    3444443       3566666776654

>KOG2893|consensus

Probab=94.59  E-value=0.013  Score=44.38  Aligned_cols=46  Identities=24%  Similarity=0.585  Sum_probs=35.1

Q ss_pred             cccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhh-hccc
Q psy4830         187 QCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH-RWSH  236 (292)
Q Consensus       187 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~h  236 (292)
                      .|-+|++.|....-|.+|++.    +-|+|.+|-|...+-..|..| |.+|
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            488888888888888888764    458888888887777777777 3444

>KOG4173|consensus

Probab=94.27  E-value=0.016  Score=42.82  Aligned_cols=85  Identities=21%  Similarity=0.515  Sum_probs=64.6

Q ss_pred             CCccccc--cccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhcc----------ccCCcceeCC--cccc
Q psy4830         184 RPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS----------HVGDKPFGCT--SCHL  249 (292)
Q Consensus       184 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~----------h~~~~~~~C~--~C~~  249 (292)
                      ..|.|++  |...|.....+..|..+-++.   .|..|.+.|.+...|..|+..          -.|...|.|-  .|+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4577876  778898888888886554442   699999999999999988642          2356679994  4999


Q ss_pred             ccCChhHHHHHhhhhcCCCCCc
Q psy4830         250 TFTSKSQFAVHLRTHHTVGANH  271 (292)
Q Consensus       250 ~f~~~~~L~~H~~~hh~~~~~~  271 (292)
                      .|.+...-+.|+-..|.-...|
T Consensus       155 KFkT~r~RkdH~I~~Hk~Pa~f  176 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKYPADF  176 (253)
T ss_pred             hhhhhhhhhhHHHHhccCCcce
Confidence            9999999999987666544443

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.20  E-value=0.092  Score=35.34  Aligned_cols=79  Identities=19%  Similarity=0.439  Sum_probs=39.6

Q ss_pred             CCcccccchhhcCChhHHHHHHhhcCCC------------cceecccccccCCChhHHHHHHHhcCCCCceecCcccccc
Q psy4830          36 RPFQCVVCLKRFSQKSALNTHKRMHIPY------------IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRF  103 (292)
Q Consensus        36 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  103 (292)
                      -|..|++||-..-....|.+----=.+.            ....|-.|...|........  ..-.....|.|+.|...|
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCCCcc
Confidence            4566777776666665555431100000            11237777777765421110  001123357777777777


Q ss_pred             CChHHHHHHHHHh
Q psy4830         104 SQKSSLNTHKRIH  116 (292)
Q Consensus       104 ~~~~~l~~H~~~h  116 (292)
                      -..-..-.|...|
T Consensus        92 C~dCD~fiHe~Lh  104 (112)
T TIGR00622        92 CVDCDVFVHESLH  104 (112)
T ss_pred             ccccchhhhhhcc
Confidence            7666666665543

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2482|consensus

Probab=93.62  E-value=0.058  Score=43.35  Aligned_cols=105  Identities=24%  Similarity=0.415  Sum_probs=66.9

Q ss_pred             CccccccccccCCchHHHHHHhh--hcCCCCcccccccccc------ccchhhhhhh----ccc---------------c
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRV--HTGERPYACDICDKRF------AVKSYVTSHR----WSH---------------V  237 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~~~C~~C~k~f------~~~~~L~~H~----~~h---------------~  237 (292)
                      .+.|-.|.+.|+.+..|+.||+.  |..-.|-. ..=++-|      ..++.+..|.    .+-               .
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPkn-reYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed  273 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKN-REYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNED  273 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCc-cccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcC
Confidence            47899999999999999999975  32211100 0001101      0011111111    000               1


Q ss_pred             CCcc--eeCCccccccCChhHHHHHhhhhcCCC--------------------------CCcccCCCCCCccChHHHHhh
Q psy4830         238 GDKP--FGCTSCHLTFTSKSQFAVHLRTHHTVG--------------------------ANHVCNVCGRSFVRDSYLIRH  289 (292)
Q Consensus       238 ~~~~--~~C~~C~~~f~~~~~L~~H~~~hh~~~--------------------------~~~~C~~C~~~f~~~~~l~~H  289 (292)
                      +..+  .+|-.|....-+...|..||++.|.-+                          ..-.|..|+-.|.....|..|
T Consensus       274 ~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~h  353 (423)
T KOG2482|consen  274 DAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIH  353 (423)
T ss_pred             CCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhh
Confidence            1123  589999999999999999999887311                          123599999999999999999


Q ss_pred             h
Q psy4830         290 Q  290 (292)
Q Consensus       290 ~  290 (292)
                      |
T Consensus       354 m  354 (423)
T KOG2482|consen  354 M  354 (423)
T ss_pred             c
Confidence            8

>TIGR00622 ssl1 transcription factor ssl1

Probab=93.09  E-value=0.3  Score=32.97  Aligned_cols=84  Identities=20%  Similarity=0.370  Sum_probs=55.1

Q ss_pred             CCCccccccccccCCchHHHHHHhhhc--------------CCCCccccccccccccchhhhhhhccccCCcceeCCccc
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHT--------------GERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCH  248 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~--------------~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~  248 (292)
                      +-|..|++||-+......|.+-.  |+              ....-.|--|+..|........  ..-.....|.|+.|.
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~--~~~~~~~~y~C~~C~   88 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSY--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF--DELKDSHRYVCAVCK   88 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhh--hccCCCcccccccccccCCCCcccCcCCCCCCcccccc--cccccccceeCCCCC
Confidence            35788999999999888887742  21              0111248888888876532110  001223478899999


Q ss_pred             cccCChhHHHHHhhhhcCCCCCcccCCCC
Q psy4830         249 LTFTSKSQFAVHLRTHHTVGANHVCNVCG  277 (292)
Q Consensus       249 ~~f~~~~~L~~H~~~hh~~~~~~~C~~C~  277 (292)
                      ..|-..-+.-.|...|       .|+-|.
T Consensus        89 ~~FC~dCD~fiHe~Lh-------~CPGC~  110 (112)
T TIGR00622        89 NVFCVDCDVFVHESLH-------CCPGCI  110 (112)
T ss_pred             Cccccccchhhhhhcc-------CCcCCC
Confidence            9998888888887664       377665

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.81  E-value=0.054  Score=30.80  Aligned_cols=32  Identities=19%  Similarity=0.575  Sum_probs=25.1

Q ss_pred             cccCCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         235 SHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       235 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      .-.||.-+.||-||..|....++.+|....|.
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            34567778899999999988888888876653

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=92.63  E-value=0.11  Score=26.78  Aligned_cols=26  Identities=23%  Similarity=0.654  Sum_probs=15.6

Q ss_pred             ceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCC
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRS  279 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~  279 (292)
                      .|.|.+||..+...             ..|-.|++||..
T Consensus         2 ~~~C~~CG~i~~g~-------------~~p~~CP~Cg~~   27 (34)
T cd00729           2 VWVCPVCGYIHEGE-------------EAPEKCPICGAP   27 (34)
T ss_pred             eEECCCCCCEeECC-------------cCCCcCcCCCCc
Confidence            36777777655331             245677777763

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893|consensus

Probab=92.61  E-value=0.034  Score=42.18  Aligned_cols=46  Identities=26%  Similarity=0.567  Sum_probs=38.9

Q ss_pred             ccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhc
Q psy4830         216 CDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       216 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      |-+|++.|.....|.+|++    .|.|+|.+|.|...+--.|..|-...|
T Consensus        13 cwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhh
Confidence            9999999999999999876    467999999999988888888854433

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=92.31  E-value=0.058  Score=41.59  Aligned_cols=13  Identities=15%  Similarity=0.496  Sum_probs=9.5

Q ss_pred             eeCCccccccCCh
Q psy4830         242 FGCTSCHLTFTSK  254 (292)
Q Consensus       242 ~~C~~C~~~f~~~  254 (292)
                      ..||.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            4688888877654

>KOG4173|consensus

Probab=92.13  E-value=0.041  Score=40.78  Aligned_cols=76  Identities=21%  Similarity=0.425  Sum_probs=61.1

Q ss_pred             CCccccc--cccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcC---------CCCCcccCC--CCC
Q psy4830         212 RPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT---------VGANHVCNV--CGR  278 (292)
Q Consensus       212 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~---------~~~~~~C~~--C~~  278 (292)
                      ..|.|++  |...|........|-.+-++.   .|.+|.+.|.+.--|..|+..-|.         +...|+|-+  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4578887  888999988888887554442   799999999999999999876552         334688965  999


Q ss_pred             CccChHHHHhhh
Q psy4830         279 SFVRDSYLIRHQ  290 (292)
Q Consensus       279 ~f~~~~~l~~H~  290 (292)
                      .|.+...-..||
T Consensus       155 KFkT~r~RkdH~  166 (253)
T KOG4173|consen  155 KFKTSRDRKDHM  166 (253)
T ss_pred             hhhhhhhhhhHH
Confidence            999999988886

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=91.85  E-value=0.12  Score=34.77  Aligned_cols=13  Identities=31%  Similarity=0.851  Sum_probs=6.2

Q ss_pred             ceeCCccccccCC
Q psy4830         241 PFGCTSCHLTFTS  253 (292)
Q Consensus       241 ~~~C~~C~~~f~~  253 (292)
                      |-.||.||..|.-
T Consensus        26 PivCP~CG~~~~~   38 (108)
T PF09538_consen   26 PIVCPKCGTEFPP   38 (108)
T ss_pred             CccCCCCCCccCc
Confidence            4445555544443

The function of members of this family is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.68  E-value=0.098  Score=29.76  Aligned_cols=26  Identities=23%  Similarity=0.489  Sum_probs=14.4

Q ss_pred             CCCCccCCcchhhcCChhHHHHHHhh
Q psy4830           6 GNKPYHCTACDASFCRKPYLEIHMRT   31 (292)
Q Consensus         6 ~~~~~~C~~C~~~f~~~~~l~~H~~~   31 (292)
                      |+--+.|+-|+..|....++.+|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            44445566666666555555555543

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=91.25  E-value=0.2  Score=29.16  Aligned_cols=11  Identities=36%  Similarity=0.757  Sum_probs=6.4

Q ss_pred             CCCcccCCCCC
Q psy4830         268 GANHVCNVCGR  278 (292)
Q Consensus       268 ~~~~~C~~C~~  278 (292)
                      +.+|.|+.||.
T Consensus        48 g~~Y~Cp~CGF   58 (61)
T COG2888          48 GNPYRCPKCGF   58 (61)
T ss_pred             CCceECCCcCc
Confidence            35566666654

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=90.34  E-value=0.18  Score=26.75  Aligned_cols=11  Identities=27%  Similarity=0.896  Sum_probs=5.1

Q ss_pred             eCCccccccCC
Q psy4830         243 GCTSCHLTFTS  253 (292)
Q Consensus       243 ~C~~C~~~f~~  253 (292)
                      .|+.|+..|.-
T Consensus         4 ~CP~C~~~~~v   14 (38)
T TIGR02098         4 QCPNCKTSFRV   14 (38)
T ss_pred             ECCCCCCEEEe
Confidence            44555444443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=89.95  E-value=0.25  Score=25.88  Aligned_cols=11  Identities=36%  Similarity=0.975  Sum_probs=5.6

Q ss_pred             CcccCCCCCCc
Q psy4830         270 NHVCNVCGRSF  280 (292)
Q Consensus       270 ~~~C~~C~~~f  280 (292)
                      ..+|+.|+..|
T Consensus        25 ~v~C~~C~~~f   35 (36)
T PF13717_consen   25 KVRCSKCGHVF   35 (36)
T ss_pred             EEECCCCCCEe
Confidence            44555555544

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=89.09  E-value=0.28  Score=35.77  Aligned_cols=10  Identities=50%  Similarity=1.208  Sum_probs=5.4

Q ss_pred             CCCcccCCCC
Q psy4830         268 GANHVCNVCG  277 (292)
Q Consensus       268 ~~~~~C~~C~  277 (292)
                      +.|-+||+||
T Consensus       147 e~P~~CPiCg  156 (166)
T COG1592         147 EAPEVCPICG  156 (166)
T ss_pred             CCCCcCCCCC
Confidence            4455555555

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=88.63  E-value=0.086  Score=40.68  Aligned_cols=44  Identities=27%  Similarity=0.584  Sum_probs=31.2

Q ss_pred             CCCccccccccccCCchHHHHHHhhh----------cCCCC-----ccccccccccccc
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVH----------TGERP-----YACDICDKRFAVK  226 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h----------~~~~~-----~~C~~C~k~f~~~  226 (292)
                      ++.+.||+|+..|.++.-+....++-          .+..|     ..||.||.+|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            35689999999999887666665431          12222     4699999988754

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=88.47  E-value=0.31  Score=27.15  Aligned_cols=10  Identities=20%  Similarity=0.793  Sum_probs=5.0

Q ss_pred             eeCCcccccc
Q psy4830         242 FGCTSCHLTF  251 (292)
Q Consensus       242 ~~C~~C~~~f  251 (292)
                      |.|+.||..|
T Consensus         4 y~C~~CG~~~   13 (46)
T PRK00398          4 YKCARCGREV   13 (46)
T ss_pred             EECCCCCCEE
Confidence            4555555444

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.16  E-value=0.48  Score=26.15  Aligned_cols=27  Identities=22%  Similarity=0.405  Sum_probs=15.2

Q ss_pred             CCcceeCCccccccCCh----hHHHHHhhhh
Q psy4830         238 GDKPFGCTSCHLTFTSK----SQFAVHLRTH  264 (292)
Q Consensus       238 ~~~~~~C~~C~~~f~~~----~~L~~H~~~h  264 (292)
                      ++....|..|++.+...    ++|..|++..
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~   43 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKKK   43 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHHT
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhhh
Confidence            34556788888777664    6788887543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.51  E-value=0.33  Score=23.29  Aligned_cols=8  Identities=38%  Similarity=1.186  Sum_probs=3.2

Q ss_pred             CCcccccc
Q psy4830         244 CTSCHLTF  251 (292)
Q Consensus       244 C~~C~~~f  251 (292)
                      |+.||..|
T Consensus        17 Cp~CG~~F   24 (26)
T PF10571_consen   17 CPHCGYDF   24 (26)
T ss_pred             CCCCCCCC
Confidence            44444333

Several members are annotated as putative helicases.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.48  E-value=0.35  Score=32.64  Aligned_cols=30  Identities=23%  Similarity=0.683  Sum_probs=19.0

Q ss_pred             ccccccccccCCchHHHHHHhhhcCCCCccccccccccccc
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVK  226 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~  226 (292)
                      ..|+.||++|...           +..|..|+.||..|...
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4677777777542           23566677777777655

The function of members of this family is unknown.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=87.41  E-value=0.31  Score=36.34  Aligned_cols=17  Identities=24%  Similarity=0.575  Sum_probs=9.1

Q ss_pred             Cccccccccccccchhh
Q psy4830         213 PYACDICDKRFAVKSYV  229 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L  229 (292)
                      -|.|+.|+.+|+...++
T Consensus       117 ~Y~Cp~C~~rytf~eA~  133 (178)
T PRK06266        117 FFFCPNCHIRFTFDEAM  133 (178)
T ss_pred             EEECCCCCcEEeHHHHh
Confidence            45555555555555444

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.80  E-value=0.6  Score=34.10  Aligned_cols=17  Identities=18%  Similarity=0.305  Sum_probs=8.5

Q ss_pred             Cccccccccccccchhh
Q psy4830         213 PYACDICDKRFAVKSYV  229 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L  229 (292)
                      -|.|+.|+.+|+...++
T Consensus       109 ~Y~Cp~c~~r~tf~eA~  125 (158)
T TIGR00373       109 FFICPNMCVRFTFNEAM  125 (158)
T ss_pred             eEECCCCCcEeeHHHHH
Confidence            34555555555544444

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=86.54  E-value=0.55  Score=32.28  Aligned_cols=30  Identities=13%  Similarity=0.165  Sum_probs=16.0

Q ss_pred             ccccccccccccchhhhhhhccccCCcceeCCccccccCCh
Q psy4830         214 YACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSK  254 (292)
Q Consensus       214 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~  254 (292)
                      ..|+.||++|...           +..|-.|+.||..|...
T Consensus        10 r~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCcccccc-----------CCCCccCCCcCCccCcc
Confidence            3566666666432           22455666666665444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2186|consensus

Probab=86.38  E-value=0.4  Score=37.10  Aligned_cols=45  Identities=22%  Similarity=0.517  Sum_probs=21.9

Q ss_pred             ccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHR  233 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~  233 (292)
                      |.|.+||....- ..|.+|+..-++ .-|.|-.|++.|.. .....|.
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhh
Confidence            455555555432 344445544444 34555555555555 3334443

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=86.22  E-value=0.31  Score=35.27  Aligned_cols=12  Identities=33%  Similarity=0.725  Sum_probs=5.9

Q ss_pred             eeCCccccccCC
Q psy4830         242 FGCTSCHLTFTS  253 (292)
Q Consensus       242 ~~C~~C~~~f~~  253 (292)
                      ++|+.||++|.+
T Consensus        29 ~~c~~c~~~f~~   40 (154)
T PRK00464         29 RECLACGKRFTT   40 (154)
T ss_pred             eeccccCCcceE
Confidence            445555555544

>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0

Probab=86.13  E-value=0.34  Score=33.50  Aligned_cols=13  Identities=54%  Similarity=0.963  Sum_probs=7.4

Q ss_pred             ccCCCCCCccChH
Q psy4830         272 VCNVCGRSFVRDS  284 (292)
Q Consensus       272 ~C~~C~~~f~~~~  284 (292)
                      +||+|.-+|++.+
T Consensus       123 vCPvCkTSFKss~  135 (140)
T PF05290_consen  123 VCPVCKTSFKSSS  135 (140)
T ss_pred             CCCcccccccccc
Confidence            3666666665543

>KOG2482|consensus

Probab=85.97  E-value=0.91  Score=36.85  Aligned_cols=139  Identities=19%  Similarity=0.362  Sum_probs=80.5

Q ss_pred             CccCCcchhhcC-ChhHHHHHHhhhcC----------------------CCCcccccchhhcCChhHHHHHHhhc--CCC
Q psy4830           9 PYHCTACDASFC-RKPYLEIHMRTHTG----------------------ERPFQCVVCLKRFSQKSALNTHKRMH--IPY   63 (292)
Q Consensus         9 ~~~C~~C~~~f~-~~~~l~~H~~~h~~----------------------~~~~~C~~C~~~f~~~~~l~~H~~~h--~~~   63 (292)
                      ...|-.|...+. +++....|+-.-++                      -..+.|-.|.+.|+++..|+.||+..  ...
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrri  223 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRI  223 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCccc
Confidence            346888877654 45566666643221                      02378999999999999999999753  211


Q ss_pred             cc--------eecc--cccccCCCh-hHHHHHHHhc--C-------------CCCc--eecCccccccCChHHHHHHHHH
Q psy4830          64 IQ--------YYCD--ACDATFTTK-QNLEVHMRTH--T-------------GERP--YQCEVCNKRFSQKSSLNTHKRI  115 (292)
Q Consensus        64 ~~--------~~C~--~C~~~f~~~-~~l~~H~~~h--~-------------~~~~--~~C~~C~~~f~~~~~l~~H~~~  115 (292)
                      .|        |.-.  .=|++.... ..+.  +.+-  .             +..+  ..|-.|.....+...|..||++
T Consensus       224 nPknreYDkfyiINY~ev~ks~t~~~~e~d--ret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~  301 (423)
T KOG2482|consen  224 NPKNREYDKFYIINYLEVGKSWTIVHSEDD--RETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKI  301 (423)
T ss_pred             CCCccccceEEEEeHhhcCCccchhhhhhh--hhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHH
Confidence            11        1100  111211111 1110  1110  0             1122  5899999888888899999876


Q ss_pred             hhcc----------------------cCCCCCCccCCCchhhhchhHHHhhhhhhh
Q psy4830         116 HINY----------------------LHTEDKPYHCTGCDAAFSRKQYLEVNHTTV  149 (292)
Q Consensus       116 h~~~----------------------~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~  149 (292)
                      -+..                      .........|-.|+-.|..+..|..|+...
T Consensus       302 vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  302 VHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            4321                      111122346889999999999888877543

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=85.85  E-value=0.62  Score=25.67  Aligned_cols=11  Identities=27%  Similarity=0.833  Sum_probs=5.4

Q ss_pred             ccccccccccc
Q psy4830         214 YACDICDKRFA  224 (292)
Q Consensus       214 ~~C~~C~k~f~  224 (292)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            44555555443

present in RNA polymerase I, II and III

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=85.41  E-value=0.75  Score=22.05  Aligned_cols=19  Identities=21%  Similarity=0.511  Sum_probs=11.7

Q ss_pred             eCCccccccCChhHHHHHhh
Q psy4830         243 GCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       243 ~C~~C~~~f~~~~~L~~H~~  262 (292)
                      .||+|++.+ ....+..|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            466676666 4456666654

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PHA00626 hypothetical protein

Probab=85.15  E-value=0.44  Score=27.30  Aligned_cols=14  Identities=14%  Similarity=0.496  Sum_probs=8.7

Q ss_pred             cceeCCccccccCC
Q psy4830         240 KPFGCTSCHLTFTS  253 (292)
Q Consensus       240 ~~~~C~~C~~~f~~  253 (292)
                      ..|+|+.||..|+.
T Consensus        22 nrYkCkdCGY~ft~   35 (59)
T PHA00626         22 DDYVCCDCGYNDSK   35 (59)
T ss_pred             cceEcCCCCCeech
Confidence            45666666666654

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=85.11  E-value=0.46  Score=34.69  Aligned_cols=11  Identities=36%  Similarity=0.884  Sum_probs=6.0

Q ss_pred             CCcceeCCccc
Q psy4830         238 GDKPFGCTSCH  248 (292)
Q Consensus       238 ~~~~~~C~~C~  248 (292)
                      |+.|-+||+||
T Consensus       146 ge~P~~CPiCg  156 (166)
T COG1592         146 GEAPEVCPICG  156 (166)
T ss_pred             CCCCCcCCCCC
Confidence            44555555555

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=85.05  E-value=0.78  Score=26.82  Aligned_cols=10  Identities=30%  Similarity=0.680  Sum_probs=6.2

Q ss_pred             CCcccCCCCC
Q psy4830         269 ANHVCNVCGR  278 (292)
Q Consensus       269 ~~~~C~~C~~  278 (292)
                      .+|.|+.||.
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            4566666664

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=85.00  E-value=0.79  Score=24.14  Aligned_cols=10  Identities=30%  Similarity=0.906  Sum_probs=4.1

Q ss_pred             eecCcccccc
Q psy4830          94 YQCEVCNKRF  103 (292)
Q Consensus        94 ~~C~~C~~~f  103 (292)
                      .+|+.|+..|
T Consensus        26 vrC~~C~~~f   35 (37)
T PF13719_consen   26 VRCPKCGHVF   35 (37)
T ss_pred             EECCCCCcEe
Confidence            3444444333

>smart00531 TFIIE Transcription initiation factor IIE

Probab=84.80  E-value=0.93  Score=32.70  Aligned_cols=15  Identities=20%  Similarity=0.698  Sum_probs=7.6

Q ss_pred             Cccccccccccccch
Q psy4830         213 PYACDICDKRFAVKS  227 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~  227 (292)
                      -|.|+.|+..|....
T Consensus        99 ~Y~Cp~C~~~y~~~e  113 (147)
T smart00531       99 YYKCPNCQSKYTFLE  113 (147)
T ss_pred             EEECcCCCCEeeHHH
Confidence            455555555555433

>smart00531 TFIIE Transcription initiation factor IIE

Probab=84.59  E-value=0.92  Score=32.72  Aligned_cols=14  Identities=21%  Similarity=0.762  Sum_probs=7.5

Q ss_pred             CCccccccccccCC
Q psy4830         184 RPFQCAVCSKRFTQ  197 (292)
Q Consensus       184 ~~~~C~~C~k~f~~  197 (292)
                      ..|.|+.|+..|..
T Consensus        98 ~~Y~Cp~C~~~y~~  111 (147)
T smart00531       98 AYYKCPNCQSKYTF  111 (147)
T ss_pred             cEEECcCCCCEeeH
Confidence            34555555555554

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.40  E-value=1.1  Score=30.40  Aligned_cols=25  Identities=28%  Similarity=0.571  Sum_probs=23.2

Q ss_pred             eeC----CccccccCChhHHHHHhhhhcC
Q psy4830         242 FGC----TSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       242 ~~C----~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      |.|    +.|+..+.+...+..|++.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            899    9999999999999999998874

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=84.11  E-value=0.36  Score=26.00  Aligned_cols=10  Identities=40%  Similarity=1.122  Sum_probs=4.1

Q ss_pred             eeCCcccccc
Q psy4830         242 FGCTSCHLTF  251 (292)
Q Consensus       242 ~~C~~C~~~f  251 (292)
                      |.|+.||..|
T Consensus         6 y~C~~Cg~~f   15 (41)
T smart00834        6 YRCEDCGHTF   15 (41)
T ss_pred             EEcCCCCCEE
Confidence            3444444433

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=83.95  E-value=0.36  Score=27.67  Aligned_cols=9  Identities=44%  Similarity=1.401  Sum_probs=3.4

Q ss_pred             ccccccccc
Q psy4830         187 QCAVCSKRF  195 (292)
Q Consensus       187 ~C~~C~k~f  195 (292)
                      .|..||..|
T Consensus         7 ~C~~Cg~~f   15 (52)
T TIGR02605         7 RCTACGHRF   15 (52)
T ss_pred             EeCCCCCEe
Confidence            333333333

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=82.70  E-value=0.76  Score=34.32  Aligned_cols=36  Identities=22%  Similarity=0.530  Sum_probs=28.3

Q ss_pred             CCCCCccccccccccCCchHHHHHHhhhcCCCCcccccccccccc
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAV  225 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~  225 (292)
                      ....-|.|+.|+..|+....+.         .-|.|+.||.....
T Consensus       113 ~~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        113 ENNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLEE  148 (178)
T ss_pred             cCCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCee
Confidence            3446799999999999887763         36999999986543

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=82.57  E-value=1  Score=32.86  Aligned_cols=30  Identities=20%  Similarity=0.526  Sum_probs=15.3

Q ss_pred             cceecccccccCCChhHHHHHHHhcCCCCceecCccccc
Q psy4830          64 IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKR  102 (292)
Q Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  102 (292)
                      .-|.|+.|+..|+....+.         ..|.|+.||..
T Consensus       108 ~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       108 MFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             CeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            3455555555555554443         13556666554

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG2186|consensus

Probab=80.57  E-value=1.5  Score=34.08  Aligned_cols=45  Identities=24%  Similarity=0.616  Sum_probs=20.3

Q ss_pred             eecccccccCCChhHHHHHHHhcCCCCceecCccccccCChHHHHHHH
Q psy4830          66 YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHK  113 (292)
Q Consensus        66 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  113 (292)
                      |.|..||..... ..+.+|+..-.+ ..|.|-.|++.|.. .++..|.
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhh
Confidence            445555544332 233445544444 33555555555544 3344443

>smart00614 ZnF_BED BED zinc finger

Probab=80.42  E-value=1.5  Score=24.88  Aligned_cols=23  Identities=26%  Similarity=0.489  Sum_probs=16.0

Q ss_pred             ceeCCccccccCCh-----hHHHHHhhh
Q psy4830         241 PFGCTSCHLTFTSK-----SQFAVHLRT  263 (292)
Q Consensus       241 ~~~C~~C~~~f~~~-----~~L~~H~~~  263 (292)
                      .-.|..|++.++..     ++|.+|++.
T Consensus        18 ~a~C~~C~~~l~~~~~~gTs~L~rHl~~   45 (50)
T smart00614       18 RAKCKYCGKKLSRSSKGGTSNLRRHLRR   45 (50)
T ss_pred             EEEecCCCCEeeeCCCCCcHHHHHHHHh
Confidence            35677777777654     578888773

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	292
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		7e-39
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		6e-33
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-11
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-16
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-12
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-10
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-16
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-16
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-15
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		3e-15
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-15
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-13
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-13
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-13
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-13
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-13
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-12
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-12
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-12
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-12
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-12
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		8e-12
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-12
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		6e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		8e-12
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-11
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-11
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-10
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-09
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-10
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		8e-08
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-07
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-09
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		4e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-09
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-09
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		8e-09
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-07
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-07
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		3e-07
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		9e-07
2yth_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		2e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		9e-05
2en1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-06
2ena_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-06
2ena_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-05
2ep2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-05
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2em3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-05
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-05
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		1e-04
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-05
2ep3_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-05
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		5e-05
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		6e-05
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		7e-05
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		6e-05
2yts_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-05
2emh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-05
2ely_A	46	Solution Structure Of The Third Zf-C2h2 Domain From		9e-05
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		1e-04
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		1e-04
2emj_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2ep1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2em6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2eml_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2en6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2en6_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2ysv_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
2ep0_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytq_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2emg_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2enh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		4e-04
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2ytg_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2en9_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2emi_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		6e-04
2emx_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2eq3_A	46	Solution Structure Of The 17th C2h2 Type Zinc Finge		7e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		8e-04
2em1_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2epz_A	46	Solution Structure Of The 4th C2h2 Type Zinc Finger		9e-04
2ytb_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  157 bits (397), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 107/210 (50%), Gaps = 36/210 (17%)
Query: 3   LHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIP 62
           L  G KPY C  C  SF R  +L  H RTHTGE+P++C  C K FS K  L  H+R H  
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74
Query: 63  YIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHT 122
              Y C  C  +F+ + NL  H RTHTGE+PY C  C K FSQ + L  H+R      HT
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-----HT 129
Query: 123 EDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTG 182
            +KPY C  C  +FSR+  L                                 H RTHTG
Sbjct: 130 GEKPYKCPECGKSFSREDNL-------------------------------HTHQRTHTG 158
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGER 212
           E+P++C  C K F+++ +LN H+R HTG++
Sbjct: 159 EKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 36/199 (18%)
Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDK 125
           Y C  C  +F+   +L  H RTHTGE+PY+C  C K FS K  L  H+R H     T +K
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH-----TGEK 76
Query: 126 PYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERP 185
           PY C  C  +FS++  L                               + H RTHTGE+P
Sbjct: 77  PYKCPECGKSFSQRANL-------------------------------RAHQRTHTGEKP 105
Query: 186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           + C  C K F+Q + L  H+R HTGE+PY C  C K F+ +  + +H+ +H G+KP+ C 
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165
Query: 246 SCHLTFTSKSQFAVHLRTH 264
            C  +F+ +    VH RTH
Sbjct: 166 ECGKSFSRRDALNVHQRTH 184

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 207 VHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT 266
           +  GE+PYAC  C K F+   ++  H+ +H G+KP+ C  C  +F+ K     H RT HT
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT-HT 73
Query: 267 VGANHVCNVCGRSFVRDSYLIRHQ 290
               + C  CG+SF + + L  HQ
Sbjct: 74  GEKPYKCPECGKSFSQRANLRAHQ 97

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5   SGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKR---MHI 61
           SG+    C  C   F  K YL++H R HTGE+PF+C  C K + +K  L  H+    M+ 
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 62  PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTH 112
               + C  C  TF  +  L +HM +HTGE PY+C  C+++F QK  L +H
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 34/144 (23%)
Query: 68  CDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
           C  C   F +K  L+VH R HTGE+P++C  C K + +K +L  H+    N ++  ++ +
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA--RNCMNRSEQVF 67
Query: 128 HCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQ 187
            C+ C   F R+  L                               ++HM +HTGE P++
Sbjct: 68  TCSVCQETFRRRMEL-------------------------------RLHMVSHTGEMPYK 96
Query: 188 CAVCSKRFTQKSSLNTHK-RVHTG 210
           C+ CS++F QK  L +H  ++H+G
Sbjct: 97  CSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 161 TWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKR---VHTGERPYACD 217
           T   KFL+  +  +VH R HTGE+PF+C  C K + +K +L  H+    ++  E+ + C 
Sbjct: 12  TCHKKFLSKYYL-KVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS 70
Query: 218 ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT 266
           +C + F  +  +  H  SH G+ P+ C+SC   F  K     H+   H+
Sbjct: 71  VCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 50/84 (59%)
Query: 35  ERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPY 94
           E+P++C  C K FSQ S L  H+R H     Y C  C  +F+   +L+ H RTHTGE+PY
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 95  QCEVCNKRFSQKSSLNTHKRIHIN 118
           +C  C K FS+   L+ H+R H N
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTHQN 85

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
           E+P++C  C K F+Q S+L  H+R HTGE+PY C  C K F+  S +  H+ +H G+KP+
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 243 GCTSCHLTFTSKSQFAVHLRTH 264
            C  C  +F+     + H RTH
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTH 83

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 5   SGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMH 60
           S  +P+ C    C+  + +  +L++H R HTGE+P+QC    C +RFS+   L  H+R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCE--VCNKRFSQKSSLNTHKRIH 116
                + C  C   F+   +L+ H RTHTGE+P+ C    C K+F++   L  H  +H
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 181 TGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSH 236
           + +RPF CA   C+KR+ + S L  H R HTGE+PY CD   C++RF+    +  H+  H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN--VCGRSFVRDSYLIRHQN 291
            G KPF C +C   F+       H RTH T      C    C + F R   L+RH N
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTH-TGEKPFSCRWPSCQKKFARSDELVRHHN 117

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF+QK++L+TH R+HTG++P+ C IC + F+ ++ + +H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTHHT 266
           PF C  C   F +     +H RT HT
Sbjct: 62  PFACDICGRKFAT-----LHTRTRHT 82

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF+Q  SL  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF+QK++L+TH R+HTG++P+ C IC + F+  + +  H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTHHT 266
           PF C  C   F +     +H R  HT
Sbjct: 62  PFACDICGRKFAT-----LHTRDRHT 82

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF+  S+L  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF++ + L  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF++ + L  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF++   L  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF++   L  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF++   L  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 61  PFACDICGRKFARSDERKRHTKIH 84

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
           ++ F C  C + FT+  +L  H+R HT ERPY CDIC K F  + ++  HR+ H  +KPF
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 243 GCTSCHLTFTSKSQFAVHLRTH 264
            C  C   F      AVH   H
Sbjct: 75  KCQECGKGFCQSRTLAVHKTLH 96

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 38  FQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCE 97
           F C +C K F + S L+TH  +H     Y C  C   F  K +++ H   HTGE+P++C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 98  VCNKRFSQKSSLNTHKRIHIN 118
           VC K FSQ S+L TH R H  
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           F C +C K F + S+L+TH  +H+  RPY C  C KRF  KS +  H + H G+KP  C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 246 SCHLTFTSKSQFAVHLRTH 264
            C   F+  S    H R H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 132 CDAAFSRKQYLEVNHTTVLAVMQPSLGNNT--WS-----AKFLTSLFSHQVHMRTHTGER 184
           CD  FS    L V H T+  V  P   N+   W       K   + +    H+R HTGE+
Sbjct: 31  CDRTFSTMHEL-VTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK 89
Query: 185 PFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDK 240
           PF C    C K F +  +L  HKR HTGE+P+ C+   CD+RFA  S    H   H  DK
Sbjct: 90  PFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 187 QCAVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGC 244
           +C    K F  K  L  H RVHTGE+P+ C    C K FA    +  H+ +H G+KPF C
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123
Query: 245 --TSCHLTFTSKSQFAVHLRTH 264
               C   F + S    H+  H
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVH 145

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
           P +C VC K F++K  L TH R HTG +PY C  CD   A  S +  H   H  ++PF C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 245 TSCHLTFTSKSQFAVHLRTH 264
             C     + SQ  VHLR+H
Sbjct: 68  QICPYASRNSSQLTVHLRSH 87

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 165 KFLTSLFSHQVHMRTHT---GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC--DIC 219
           K  T +F     MR H    G R   CA C K F + S L  H+ VHTGE+P+ C  + C
Sbjct: 11  KGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC 70
Query: 220 DKRFAVKSYVTSHRWSHVGDKPFGC--TSCHLTFTSKSQFAVHLRTHHTVGAN 270
            KRF++   + +H   H GD+P+ C    C+  F   +    H+ TH     N
Sbjct: 71  GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 191 CSKRFTQKSSLNTHKRVHTGERPYAC--DICDKRFAVKSYVTSHRWSHVGDKPFGCTSCH 248
           C+K +T+ S L  H R HTGE+PY C  + CD RFA    +T H   H G KPF C  C+
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 249 LTFTSKSQFAVHLRTH 264
            +F+     A+H++ H
Sbjct: 83  RSFSRSDHLALHMKRH 98

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 33  TGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGER 92
           +G++ + C  C K F+ KS  + H  MH+    Y C  C   F  K +L  HM+ HTG +
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 93  PYQCEVCNKRFSQKSSLNTH 112
           PY+C +C KRF  + S + H
Sbjct: 65  PYECNICAKRFMWRDSFHRH 84

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           +G++ + C  C K FT KS  + H  +H G RPY C +C K+F +K ++  H   H G K
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 241 PFGCTSCHLTFTSKSQFAVHL 261
           P+ C  C   F  +  F  H+
Sbjct: 65  PYECNICAKRFMWRDSFHRHV 85

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 189 AVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           A C K +T+ S L  H R HTGE+PY CD   C  +FA    +T H   H G +PF C  
Sbjct: 11  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 70
Query: 247 CHLTFTSKSQFAVHLRTH 264
           C   F+     A+H++ H
Sbjct: 71  CDRAFSRSDHLALHMKRH 88

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 189 AVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           A C K +T+ S L  H R HTGE+PY CD   C  +FA    +T H   H G +PF C  
Sbjct: 12  AGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK 71
Query: 247 CHLTFTSKSQFAVHLRTH 264
           C   F+     A+H++ H
Sbjct: 72  CDRAFSRSDHLALHMKRH 89

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 209 TGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH-TV 267
           +G    AC+IC K F    ++  H+ SH G+KP+ C  C L F  K + + H+R+H  +V
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 268 GANHVCNVCGRSFVRDSYLIRH 289
           G  ++C  CG+ F R  +L  H
Sbjct: 63  GKPYICQSCGKGFSRPDHLNGH 84

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 25  LEIHMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMHIPYIQYYC--DACDATFTTKQN 80
           L +HMR HTGE+P +C    C K +S+   L TH R H     Y C  + C   F+   +
Sbjct: 55  LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASD 114
Query: 81  LEVHM-RTHTGERPYQCEV--CNKRFSQKSSLNTH 112
              H  RTH+ E+PY C++  C KR++  SSL  H
Sbjct: 115 RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 175 VHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYAC--DICDKRFAVKSYVT 230
           VHMR HTGE+P +C    C K +++  +L TH R HTGE+PY C  + C K F+  S   
Sbjct: 57  VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116
Query: 231 SHR-WSHVGDKPFGCT--SCHLTFTSKSQFAVHLRTHH 265
            H+  +H  +KP+ C    C   +T  S    H++T H
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 7  NKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
           KPY C  C  +F R   L  H R HTGE+P++C+ C K FSQ S L  H+R+H
Sbjct: 12 EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
           E+P+ C  C K F++ S L  H+RVHTGE+PY C  C K F+  S + +H+  H      
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Query: 243 G 243
           G
Sbjct: 72  G 72

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 61/143 (42%), Gaps = 38/143 (26%)
Query: 15  CDASFCRKPYLEIHMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMHIPYIQYYC--DA 70
           C A++ +   L+ H+  HTGE+PF C    C K F+    L  H   H     + C  D 
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 71  CDATFTTKQN--------------------------------LEVHMRTHTGERPYQC-- 96
           CD  FTTK N                                L+VH  +HT + PY+C  
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139
Query: 97  EVCNKRFSQKSSLNTHKRIHINY 119
           E C+KRFS  S L  H+++H  Y
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGY 162

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 57  KRMHIPYIQYYCD--ACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTH 112
           K + + Y +Y C    C A +     L+ H+  HTGE+P+ C  E C K F+    L  H
Sbjct: 4   KALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH 63
Query: 113 KRIHINYLHTEDKPYHC--TGCDAAFSRKQYLEVN----HTTVLAVMQPSLGNNTWSAKF 166
                +  HT +K + C   GCD  F+ K  ++ +    H   + V      N   + K 
Sbjct: 64  -----SLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKK 118
Query: 167 LTSLFSHQVHMRTHTGERPFQCA--VCSKRFTQKSSLNTHKRVHTG 210
              L   +VH  +HT + P++C    C KRF+  S L  H++VH G
Sbjct: 119 HNQL---KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 174 QVHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYV 229
           Q H+  HTGE+PF C    C K FT    L  H   HTGE+ + CD   CD RF  K+ +
Sbjct: 31  QAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM 90
Query: 230 TSH--RWSHVGDKPFGC--TSCHLTFTSKSQFAVHLRTHHTVGANHVC--NVCGRSFVRD 283
             H  R+ ++    + C   +C   F   +Q  VH +  HT    + C    C + F   
Sbjct: 91  KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLP 149
Query: 284 SYLIRHQ 290
           S L RH+
Sbjct: 150 SRLKRHE 156

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHR 233
           +PFQC +C + F++   L TH R HTGE+P+ACDIC ++FA       HR
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTV 267
           +P+ C IC + F+   ++T+H  +H G+KPF C  C   F    +   H    H +
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL 57

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
           Y CD C A+F  K NL  H   HTGE+PY+C +C  +F++ ++L TH RIH
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
           ++P++C  C   F  K +L +HK VHTGE+PY C+IC  +F   + + +H   H G+KP
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 65  QYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHIN 118
           +Y CD C  +F+   +L  H RTHTGE+PY+C+ C K F Q+S L  H R+H  
Sbjct: 18  RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
           R ++C  C K F+  S L+ H+R HTGE+PY CD C K F  +S++  H   H G  P
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 8  KPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          +PY C   +CD  F R   L  H+R HTG++PFQC +C++ FS+   L TH R H
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 184 RPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
           RP+ C V  C +RF++   L  H R+HTG++P+ C IC + F+   ++T+H  +H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
           G   + C VC + +   +SL  H  +H+ E+ Y C  C+K F +  Y T H   H G++ 
Sbjct: 19  GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR 78
Query: 242 FGCTSCHLTFTSKSQFAVHLRTHHT 266
           + C +C  +F +    + H+++ H+
Sbjct: 79  YQCLACGKSFINYQFMSSHIKSVHS 103

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTED-KPYHCTGCDAAFSRKQYLEV 144
           RTH+GE+PY+C +C+ RF+Q  ++    ++HI   HTE+   +HC  CD   +RK  L V
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTM----KMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63
Query: 145 NHTTVLAVMQPSLG 158
           +     +   PS G
Sbjct: 64  HLRKQHSYSGPSSG 77

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 189 AVCSKRFTQKSSLNTHKRVHTGERPYAC--DICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           A C   + +   L  H   HTGE+P+ C  + C+K F    ++T H  +H G+K F C S
Sbjct: 9   ADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS 68
Query: 247 --CHLTFTSKSQFAVHLRTHHTV 267
             C L FT+K+    H    H +
Sbjct: 69  DGCDLRFTTKANMKKHFNRFHNI 91

>pdb|2YTH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 479- 511) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E+PFQC  C KRFTQ S L++H+RVHTGE+P  
Sbjct: 10  EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG 42

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 68  CDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
           C  C   F +   L +H+RTHTGE+PY+CE C    +QK+SL  H   H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 161 TWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVH 208
           ++  KF  S +   +H+RTHTGE+P++C  C     QK+SL  H   H
Sbjct: 8   SYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|2EN1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 563- 595) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E+PF+C  C KRFTQ S L++H+RVHTGE+P  
Sbjct: 10  EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG 42

>pdb|2ENA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 311- 343) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           + T E+PF+C  C K F Q+S+LN+H+ +HTGE+P  
Sbjct: 6   SGTAEKPFRCDTCDKSFRQRSALNSHRMIHTGEKPSG 42

>pdb|2ENA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 311- 343) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 209 TGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           T E+P+ CD CDK F  +S + SHR  H G+KP G +S
Sbjct: 8   TAEKPFRCDTCDKSFRQRSALNSHRMIHTGEKPSGPSS 45

>pdb|2EP2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 603- 635) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C++C K FT+KS L+ H+++HTGE+P
Sbjct: 10  EKPYECSICGKSFTKKSQLHVHQQIHTGEKP 40

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 5  SGNKPYHCTACDASFCRKPYLEIHMRTHTGERP 37
          SG KPY C+ C  +F  K YL IHMRTHTGE+P
Sbjct: 6  SGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKP 38

>pdb|2EM3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 640- 672) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C VCSK FTQK+ L  H++ HTGE+P
Sbjct: 10  EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 30 RTHTGERPFQCVVCLKRFSQKSALNTH-KRMHIPYI---QYYCDACDATFTTKQNLEVHM 85
          RTHTGE+P+ C  C K F QK  L+ H KR H P      + C  C  TFT +  +  H 
Sbjct: 8  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA 67
Query: 86 RTHTGERPYQCE 97
              G    + E
Sbjct: 68 DNCAGPDGVEGE 79

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 235 SHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT---VGANHVCNVCGRSFVRDSYLIRHQN 291
           +H G+KP+ C+ C  TF  K    +H + +H    V A  VC+ CG++F R + + RH +
Sbjct: 9   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD 68

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTH-KRIHINYL 120
           + C+ C   F  +++L+ H R+HT E+PY C +CN+ F+++  L  H ++IH   L
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH 232
           F C VC++ F ++  L  H R HT E+PY C +C++ F  +  +  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           +GE+P+QC  C K F+Q+ SL  H+R+HTG  P
Sbjct: 6   SGEKPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

>pdb|2EP3|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 631- 663) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++CA C K FT +S+L TH+++HTGE+P
Sbjct: 10  EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP 40

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C  C K F QK++L  H+R+HTGE+P
Sbjct: 10  EKPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH 232
           ERPF C  C K +   S L+ H+R H G RP +C  C K F  +S V  H
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRH 51

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 211 ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGA 269
           ERP+ C+ C K +   S ++ HR +H+G +P  C  C   F  +S+   HL+ H    A
Sbjct: 2   ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKPA 60

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 70  ACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIH 116
            C  T+    +L+ H RTHTGE+P+ C  + C +RF++   L+ H+R H
Sbjct: 24  GCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2YTS|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 715- 747) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E+P+ C  C K F QKS LN H+R+HTGE+P  
Sbjct: 10  EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG 42

>pdb|2EMH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 491- 523) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           ERP+ C VC K FT +S+L  H+++HTGE+P
Sbjct: 10  ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40

>pdb|2ELY|A Chain A, Solution Structure Of The Third Zf-C2h2 Domain From Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E+PF+C  C K F+++S+LN H ++HTGE+P  
Sbjct: 10  EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG 42

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 69  DACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIHINY 119
           + C   F     L+VH  +HT + PY+C  E C+KRFS  S L  H+++H  Y
Sbjct: 7   ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 69  DACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIHINY 119
           + C   F     L+VH  +HT + PY+C  E C+KRFS  S L  H+++H  Y
Sbjct: 7   ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59

>pdb|2EMJ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 612- 644) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+PF+CA C K F+  S L TH+R+HTGE+P
Sbjct: 10  EKPFECAECGKSFSISSQLATHQRIHTGEKP 40

>pdb|2EP1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 435- 467) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C+ C K F +KS L+ H+R+HTGE P
Sbjct: 10  EKPYECSDCGKSFIKKSQLHVHQRIHTGENP 40

>pdb|2EM6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 199- 231) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E+ ++C VC K F+Q S L TH+RVHTGE+P  
Sbjct: 10  EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG 42

>pdb|2EML|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 752- 784) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 14/31 (45%), Positives = 26/31 (83%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C+VC K F+ + SL+ H+R+H+G++P
Sbjct: 10  EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40

>pdb|2EN6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 887- 919) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P+ C  C K F+QKS L+ H+R HTGE+P
Sbjct: 10  EKPYGCNECGKTFSQKSILSAHQRTHTGEKP 40

>pdb|2EN6|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 887- 919) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 211 ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           E+PY C+ C K F+ KS +++H+ +H G+KP G +S
Sbjct: 10  EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45

>pdb|2YSV|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 17 In Zinc Finger Protein 473 Length = 42

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGE 211
           +GE+P+ C  C K FTQ S L+ H+RVHTGE
Sbjct: 6   SGEKPYVCQECGKAFTQSSCLSIHRRVHTGE 36

>pdb|2EP0|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 528- 560) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C VC K F   SSL  H+R+HTGE+P
Sbjct: 10  EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40

>pdb|2YTF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 607- 639) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E+PF+C+ C K F  KS+L  H+R HTGE+P  
Sbjct: 10  EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG 42

>pdb|2YTQ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 775- 807) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 8  KPYHCTACDASFCRKPYLEIHMRTHTGERP 37
          KPY C+ C  +F  K YL IHMRTH+GE+P
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40

>pdb|2EMG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 463- 495) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E PF C+ C K FT K++L  H+++HTGERP  
Sbjct: 10  ENPFICSECGKVFTHKTNLIIHQKIHTGERPSG 42

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C  C K FTQ S L  H R+HTGE+P
Sbjct: 10  EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|2ENH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 556- 588) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C VC K F+  +SL  H+RVH+GE+P
Sbjct: 10  EKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           +P+QC  C K F+Q S L  H+RVHTGE+P
Sbjct: 11  KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C  C K F+Q S L  H+R+HTGE+P
Sbjct: 10  EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2YTG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 369- 401) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           E+PF+C  C K + Q+  L  H+RVHTGE+P  
Sbjct: 10  EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG 42

>pdb|2EN9|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 415- 447) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
           F+C  C K FTQ SSL  H+R+HTGE+P  
Sbjct: 13  FKCNECKKTFTQSSSLTVHQRIHTGEKPSG 42

>pdb|2EMI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 547- 579) Of Human Zinc Finger Protein 484 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           ER ++C+ C K F QKS+L+ H+R+H GE+P
Sbjct: 10  ERHYECSECGKAFIQKSTLSMHQRIHRGEKP 40

>pdb|2EMX|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 273- 303) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 209 TGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +GE+P+ C  C+K F+ KSY+  H+ +H  +KP G +S
Sbjct: 6   SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43

>pdb|2EQ3|A Chain A, Solution Structure Of The 17th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 211 ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           E+PY C+ C K F+V+S +T+H+  H G KP G +S
Sbjct: 10  EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 65  QYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTH 112
           +Y C+ C         L+ H+RTHT  RPY C  CN  F  K +L  H
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48

>pdb|2EM1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 637- 667) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           +GE+P+ C  C K FT KS L  HK VHTG +P
Sbjct: 6   SGEKPYSCNECGKAFTFKSQLIVHKGVHTGVKP 38

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C  C K F+Q + L  H+RVHTGE+P
Sbjct: 10  EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|2EPZ|A Chain A, Solution Structure Of The 4th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+PF C  C K F+    LN H+R+HTGE+P
Sbjct: 10  EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP 40

>pdb|2YTB|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 5 In Zinc Finger Protein 32 Length = 42

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           E+P++C  C K F+QK SL  H RVHTG  P
Sbjct: 9   EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	292
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-66
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-62
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-59
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-48
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-37
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-31
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-42
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-38
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-38
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-31
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-28
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-41
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-40
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-37
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-35
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-39
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-39
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-38
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-32
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-32
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-37
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-33
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-30
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-29
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-37
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-36
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-30
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-35
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-35
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-33
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-32
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-34
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-31
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-30
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-22
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-33
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-32
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-28
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-28
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-30
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-29
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-28
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-27
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-25
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-24
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-28
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-26
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-25
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-26
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-25
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-24
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-18
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-24
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-22
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-21
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-25
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-23
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-21
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-24
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-24
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-22
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-17
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-24
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-23
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-17
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-24
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-23
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-23
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-22
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-23
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-21
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-21
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-20
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-21
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-21
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-21
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-21
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-21
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-19
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-17
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-17
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-15
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-16
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-15
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-15
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-16
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-15
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-16
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-16
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-16
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	9e-14
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	9e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-16
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-16
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-16
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-14
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-16
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-16
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-14
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-16
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-16
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-16
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-14
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-16
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-10
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-16
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-16
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-16
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-16
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-15
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-15
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	6e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-14
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-15
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-13
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-15
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	7e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-15
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-15
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-15
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-10
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-14
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-14
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-15
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-15
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-15
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-14
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-14
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-15
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-13
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-15
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-15
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-13
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-15
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-10
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-14
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-14
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-14
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-14
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-10
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-14
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-13
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-12
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	9e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	8e-08
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-09
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	9e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	7e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-08
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	3e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	5e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	3e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	5e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	3e-04
3ray_A	237	PR domain-containing protein 11; structural genomi	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	6e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  203 bits (518), Expect = 8e-66
 Identities = 78/227 (34%), Positives = 112/227 (49%), Gaps = 42/227 (18%)

Query: 18  SFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI---PYIQYYCDACDAT 74
           S               GE+P+ C  C K FS+   L  H+R H    PY    C  C  +
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYK---CPECGKS 58

Query: 75  FTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDA 134
           F+ K++L  H RTHTGE+PY+C  C K FSQ+++L  H+R      HT +KPY C  C  
Sbjct: 59  FSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT-----HTGEKPYACPECGK 113

Query: 135 AFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKR 194
           +FS+  +L                               + H RTHTGE+P++C  C K 
Sbjct: 114 SFSQLAHL-------------------------------RAHQRTHTGEKPYKCPECGKS 142

Query: 195 FTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
           F+++ +L+TH+R HTGE+PY C  C K F+ +  +  H+ +H G K 
Sbjct: 143 FSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  195 bits (498), Expect = 1e-62
 Identities = 83/213 (38%), Positives = 107/213 (50%), Gaps = 42/213 (19%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI-- 61
             G KPY C  C  SF R  +L  H RTHTGE+P++C  C K FS K  L  H+R H   
Sbjct: 16  EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGE 75

Query: 62  -PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYL 120
            PY    C  C  +F+ + NL  H RTHTGE+PY C  C K FSQ + L  H+R      
Sbjct: 76  KPYK---CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT----- 127

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
           HT +KPY C  C  +FSR+  L                                 H RTH
Sbjct: 128 HTGEKPYKCPECGKSFSREDNL-------------------------------HTHQRTH 156

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
           TGE+P++C  C K F+++ +LN H+R HTG++ 
Sbjct: 157 TGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  187 bits (477), Expect = 2e-59
 Identities = 72/217 (33%), Positives = 103/217 (47%), Gaps = 37/217 (17%)

Query: 74  TFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCD 133
           +     +         GE+PY C  C K FS+   L  H+R H     T +KPY C  C 
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH-----TGEKPYKCPECG 56

Query: 134 AAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSK 193
            +FS K+ L                                 H RTHTGE+P++C  C K
Sbjct: 57  KSFSDKKDL-------------------------------TRHQRTHTGEKPYKCPECGK 85

Query: 194 RFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTS 253
            F+Q+++L  H+R HTGE+PYAC  C K F+  +++ +H+ +H G+KP+ C  C  +F+ 
Sbjct: 86  SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSR 145

Query: 254 KSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           +     H RT HT    + C  CG+SF R   L  HQ
Sbjct: 146 EDNLHTHQRT-HTGEKPYKCPECGKSFSRRDALNVHQ 181

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 38.6 bits (91), Expect = 8e-04
 Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 249 LTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           ++    S               + C  CG+SF R  +L  HQ
Sbjct: 1   ISEFGSSSSVAQAAL-EPGEKPYACPECGKSFSRSDHLAEHQ 41

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  158 bits (401), Expect = 4e-48
 Identities = 49/220 (22%), Positives = 76/220 (34%), Gaps = 54/220 (24%)

Query: 28  HMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMHI---PYIQYYCD--ACDATFTTKQN 80
                   + + C    C   +++   L  H   H    P+    C    C+  FT+  +
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFP---CKEEGCEKGFTSLHH 59

Query: 81  LEVHMRTHTGERPYQCE--VCNKRFSQKSSLNTHKRIHINYLHTEDK--PYHCTG--CDA 134
           L  H  THTGE+ + C+   C+ RF+ K+++  H            K   Y C    C  
Sbjct: 60  LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF-----HNIKICVYVCHFENCGK 114

Query: 135 AFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQC--AVCS 192
           AF +   L                               +VH  +HT + P++C    C 
Sbjct: 115 AFKKHNQL-------------------------------KVHQFSHTQQLPYECPHEGCD 143

Query: 193 KRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH 232
           KRF+  S L  H++VH G      D C       +    H
Sbjct: 144 KRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  128 bits (325), Expect = 8e-37
 Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 15/159 (9%)

Query: 1   MKLHSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQC--VVCLKRFSQKSALNTH 56
           +  H+G KP+ C    C+  F    +L  H  THTGE+ F C    C  RF+ K+ +  H
Sbjct: 34  LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKH 93

Query: 57  KRMHI--PYIQYYCDA--CDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLN 110
                      Y C    C   F     L+VH  +HT + PY+C  E C+KRFS  S L 
Sbjct: 94  FNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK 153

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTV 149
            H+++H               C            +    
Sbjct: 154 RHEKVH-----AGYPCKKDDSCSFVGKTWTLYLKHVAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  113 bits (284), Expect = 8e-31
 Identities = 51/191 (26%), Positives = 68/191 (35%), Gaps = 49/191 (25%)

Query: 112 HKRIHINYLHTEDKPYHCTG--CDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTS 169
            K +         K Y C+   C AA+++   L                           
Sbjct: 3   EKALP-----VVYKRYICSFADCGAAYNKNWKL--------------------------- 30

Query: 170 LFSHQVHMRTHTGERPFQC--AVCSKRFTQKSSLNTHKRVHTGERPYACD--ICDKRFAV 225
               Q H+  HTGE+PF C    C K FT    L  H   HTGE+ + CD   CD RF  
Sbjct: 31  ----QAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT 86

Query: 226 KSYVTSHRWSHVGDK--PFGCTS--CHLTFTSKSQFAVHLRTHHTVGANHVCN--VCGRS 279
           K+ +  H       K   + C    C   F   +Q  VH  + HT    + C    C + 
Sbjct: 87  KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKR 145

Query: 280 FVRDSYLIRHQ 290
           F   S L RH+
Sbjct: 146 FSLPSRLKRHE 156

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 99.6 bits (249), Expect = 1e-25
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 15/128 (11%)

Query: 1   MKLHSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGER--PFQCVV--CLKRFSQKSALN 54
              H+G K + C    CD  F  K  ++ H       +   + C    C K F + + L 
Sbjct: 64  SLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLK 123

Query: 55  THKRMHI---PYIQYYC--DACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSL 109
            H+  H    PY    C  + CD  F+    L+ H + H G    + + C+      +  
Sbjct: 124 VHQFSHTQQLPYE---CPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180

Query: 110 NTH-KRIH 116
             H    H
Sbjct: 181 LKHVAECH 188

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  140 bits (356), Expect = 7e-42
 Identities = 56/212 (26%), Positives = 75/212 (35%), Gaps = 67/212 (31%)

Query: 8   KPYHCTACDASFCRKPYLEIHM---RTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYI 64
                  C   F  +  L  H+     H   + F C                        
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG-------------------- 41

Query: 65  QYYCDACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIHINYLHT 122
              C      F  +  L VHMR HTGE+P++C  E C K +S+  +L TH R H     T
Sbjct: 42  ---CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH-----T 93

Query: 123 EDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            +KPY C   GC  AFS                              +    HQ   RTH
Sbjct: 94  GEKPYMCEHEGCSKAFSN----------------------------ASDRAKHQ--NRTH 123

Query: 181 TGERPFQCAV--CSKRFTQKSSLNTHKRVHTG 210
           + E+P+ C +  C+KR+T  SSL  H +   G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  131 bits (332), Expect = 2e-38
 Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 51/188 (27%)

Query: 66  YYCDACDATFTTKQNLEVHM---RTHTGERPYQCEVCN-----KRFSQKSSLNTHKRIHI 117
              D C   F +++ L  H+     H   + + C         + F  +  L  H R H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH- 62

Query: 118 NYLHTEDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQV 175
               T +KP+ CT  GC  ++SR + L                               + 
Sbjct: 63  ----TGEKPHKCTFEGCRKSYSRLENL-------------------------------KT 87

Query: 176 HMRTHTGERPFQC--AVCSKRFTQKSSLNTHK-RVHTGERPYACDI--CDKRFAVKSYVT 230
           H+R+HTGE+P+ C    CSK F+  S    H+ R H+ E+PY C +  C KR+   S + 
Sbjct: 88  HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR 147

Query: 231 SHRWSHVG 238
            H  +  G
Sbjct: 148 KHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  131 bits (332), Expect = 3e-38
 Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 43/186 (23%)

Query: 91  ERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVL 150
           E   + + C++ F  +  L  H       +H E K + C     +   +           
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEH--IHGERKEFVCHWGGCSRELRP---------- 48

Query: 151 AVMQPSLGNNTWSAKFLTSLFSHQ----VHMRTHTGERPFQCAV--CSKRFTQKSSLNTH 204
                               F  Q    VHMR HTGE+P +C    C K +++  +L TH
Sbjct: 49  --------------------FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTH 88

Query: 205 KRVHTGERPYAC--DICDKRFAVKSYVTSHRW-SHVGDKPFGCTS--CHLTFTSKSQFAV 259
            R HTGE+PY C  + C K F+  S    H+  +H  +KP+ C    C   +T  S    
Sbjct: 89  LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148

Query: 260 HLRTHH 265
           H++T H
Sbjct: 149 HVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  112 bits (283), Expect = 5e-31
 Identities = 48/191 (25%), Positives = 68/191 (35%), Gaps = 76/191 (39%)

Query: 4   HSGNKPYHCTACDASFCRKP-----YLEIHMRTHTGERPFQCVV--CLKRFSQKSALNTH 56
           H   K + C     S   +P      L +HMR HTGE+P +C    C K +S+       
Sbjct: 29  HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE----- 83

Query: 57  KRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCE--VCNKRFSQKSSLNTHK- 113
                                  NL+ H+R+HTGE+PY CE   C+K FS  S    H+ 
Sbjct: 84  -----------------------NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 114 RIHINYLHTEDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF 171
           R      H+ +KPY C   GC   ++    L                             
Sbjct: 121 RT-----HSNEKPYVCKLPGCTKRYTDPSSL----------------------------- 146

Query: 172 SHQVHMRTHTG 182
             + H++T  G
Sbjct: 147 --RKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  105 bits (264), Expect = 3e-28
 Identities = 39/177 (22%), Positives = 58/177 (32%), Gaps = 39/177 (22%)

Query: 125 KPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGER 184
                 GC   F                                 L  H      H   +
Sbjct: 2   TDCRWDGCSQEFDS----------------------------QEQLVHHINSEHIHGERK 33

Query: 185 PFQCAVC-----SKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHV 237
            F C         + F  +  L  H R HTGE+P+ C    C K ++    + +H  SH 
Sbjct: 34  EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 93

Query: 238 GDKPFGCT--SCHLTFTSKSQFAVHLRTHHTVGANHVCNV--CGRSFVRDSYLIRHQ 290
           G+KP+ C    C   F++ S  A H    H+    +VC +  C + +   S L +H 
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 62.6 bits (153), Expect = 3e-12
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)

Query: 1   MKLHSGNKPYHCT--ACDASFCRKPYLEIHM-RTHTGERPFQCVV--CLKRFSQKSALNT 55
           ++ H+G KPY C    C  +F        H  RTH+ E+P+ C +  C KR++  S+L  
Sbjct: 89  LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148

Query: 56  HKRMH 60
           H +  
Sbjct: 149 HVKTV 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  138 bits (350), Expect = 4e-41
 Identities = 45/188 (23%), Positives = 63/188 (33%), Gaps = 49/188 (26%)

Query: 43  CLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQ------- 95
                       + K +    +     +CD TF+T   L  H+       P Q       
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 96  --CEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT--GCDAAFSRKQYLEVNHTTVLA 151
             C    K F  K  L  H R+     HT +KP+ C   GC   F+R + L         
Sbjct: 63  EECPREGKSFKAKYKLVNHIRV-----HTGEKPFPCPFPGCGKIFARSENL--------- 108

Query: 152 VMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHT 209
                                 ++H RTHTGE+PF+C    C +RF   S    H  VHT
Sbjct: 109 ----------------------KIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

Query: 210 GERPYACD 217
            ++     
Sbjct: 147 SDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  135 bits (342), Expect = 7e-40
 Identities = 43/188 (22%), Positives = 61/188 (32%), Gaps = 49/188 (26%)

Query: 71  CDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYH-- 128
             ++    +           +     + C++ FS    L TH  +          P    
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME-----HVGGPEQNN 57

Query: 129 -------CTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
                  C     +F  K  L                                 H+R HT
Sbjct: 58  HVCYWEECPREGKSFKAKYKL-------------------------------VNHIRVHT 86

Query: 182 GERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHV 237
           GE+PF C    C K F +  +L  HKR HTGE+P+ C+   CD+RFA  S    H   H 
Sbjct: 87  GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

Query: 238 GDKPFGCT 245
            DK    +
Sbjct: 147 SDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  128 bits (324), Expect = 4e-37
 Identities = 41/144 (28%), Positives = 57/144 (39%), Gaps = 24/144 (16%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQ---------CVVCLKRFSQKSALN 54
                     +CD +F     L  H+       P Q         C    K F  K  L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 55  THKRMHI---PYIQYYCDA--CDATFTTKQNLEVHMRTHTGERPYQCEV--CNKRFSQKS 107
            H R+H    P+    C    C   F   +NL++H RTHTGE+P++CE   C++RF+  S
Sbjct: 80  NHIRVHTGEKPFP---CPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSS 136

Query: 108 SLNTHKRIHINYLHTEDKPYHCTG 131
               H  +     HT DK    +G
Sbjct: 137 DRKKHMHV-----HTSDKSGPSSG 155

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  123 bits (312), Expect = 2e-35
 Identities = 40/175 (22%), Positives = 56/175 (32%), Gaps = 49/175 (28%)

Query: 27  IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH---IPYIQYY------CDACDATFTT 77
                   +       C + FS    L TH  M     P    +      C     +F  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 78  KQNLEVHMRTHTGERPYQCEV--CNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT--GCD 133
           K  L  H+R HTGE+P+ C    C K F++  +L  HKR      HT +KP+ C   GCD
Sbjct: 75  KYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-----HTGEKPFKCEFEGCD 129

Query: 134 AAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQC 188
             F+                                    + HM  HT ++    
Sbjct: 130 RRFANSSDR-------------------------------KKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 96.6 bits (241), Expect = 6e-25
 Identities = 31/141 (21%), Positives = 41/141 (29%), Gaps = 14/141 (9%)

Query: 163 SAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA------- 215
           S      +            +       C + F+    L TH  +     P         
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 216 --CDICDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFTSKSQFAVHLRTHHTVGANH 271
             C    K F  K  + +H   H G+KPF C    C   F       +H RT HT     
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGEKPF 121

Query: 272 VCNV--CGRSFVRDSYLIRHQ 290
            C    C R F   S   +H 
Sbjct: 122 KCEFEGCDRRFANSSDRKKHM 142

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  132 bits (335), Expect = 4e-39
 Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 10/120 (8%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI-- 61
            SG+    C  C   F  K YL++H R HTGE+PF+C  C K + +K  L  H+  +   
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 62  ----PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHK-RIH 116
                +    C  C  TF  +  L +HM +HTGE PY+C  C+++F QK  L +H  ++H
Sbjct: 62  RSEQVFT---CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  132 bits (335), Expect = 4e-39
 Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 62/182 (34%)

Query: 32  HTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGE 91
            +G    +C  C K+F  K                              L+VH R HTGE
Sbjct: 2   SSGSSGVECPTCHKKFLSKY----------------------------YLKVHNRKHTGE 33

Query: 92  RPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLA 151
           +P++C  C K + +K +L  H+  +   ++  ++ + C+ C   F R+  L         
Sbjct: 34  KPFECPKCGKCYFRKENLLEHEARNC--MNRSEQVFTCSVCQETFRRRMEL--------- 82

Query: 152 VMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHK-RVHTG 210
                                 ++HM +HTGE P++C+ CS++F QK  L +H  ++H+G
Sbjct: 83  ----------------------RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

Query: 211 ER 212
             
Sbjct: 121 PS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  131 bits (332), Expect = 1e-38
 Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 34/154 (22%)

Query: 88  HTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHT 147
            +G    +C  C+K+F  K  L  H R H     T +KP+ C  C   + RK        
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKH-----TGEKPFECPKCGKCYFRK-------- 48

Query: 148 TVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRV 207
                                +L  H+     +  E+ F C+VC + F ++  L  H   
Sbjct: 49  --------------------ENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS 88

Query: 208 HTGERPYACDICDKRFAVKSYVTSHRW-SHVGDK 240
           HTGE PY C  C ++F  K  + SH    H G  
Sbjct: 89  HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  114 bits (288), Expect = 4e-32
 Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 35/148 (23%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            +      C  C   F  K YL                               +VH R H
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYL-------------------------------KVHNRKH 30

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKR---VHTGERPYACDICDKRFAVKSYVTSHRWSHV 237
           TGE+PF+C  C K + +K +L  H+    ++  E+ + C +C + F  +  +  H  SH 
Sbjct: 31  TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHT 90

Query: 238 GDKPFGCTSCHLTFTSKSQFAVH-LRTH 264
           G+ P+ C+SC   F  K     H ++ H
Sbjct: 91  GEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  113 bits (286), Expect = 7e-32
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH---RWSH 236
            +G    +C  C K+F  K  L  H R HTGE+P+ C  C K +  K  +  H      +
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQNK 292
             ++ F C+ C  TF  + +  +H+ + HT    + C+ C + F++   L  H  K
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVS-HTGEMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  126 bits (320), Expect = 3e-37
 Identities = 39/130 (30%), Positives = 50/130 (38%), Gaps = 36/130 (27%)

Query: 87  THTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNH 146
           +     P++CEVC K FS+K  L TH R      HT  KPY C  CD A +    L    
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRC-----HTGVKPYKCKTCDYAAADSSSL---- 52

Query: 147 TTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKR 206
                                        H+R H+ ERPF+C +C       S L  H R
Sbjct: 53  ---------------------------NKHLRIHSDERPFKCQICPYASRNSSQLTVHLR 85

Query: 207 VHTGERPYAC 216
            HTG+   + 
Sbjct: 86  SHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  117 bits (296), Expect = 1e-33
 Identities = 34/126 (26%), Positives = 47/126 (37%), Gaps = 33/126 (26%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
              + P+ C  C   F RK  L+ HMR HTG +P++C  C    +  S+LN H       
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL------ 56

Query: 64  IQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
                                 R H+ ERP++C++C       S L  H R      HT 
Sbjct: 57  ----------------------RIHSDERPFKCQICPYASRNSSQLTVHLRS-----HTG 89

Query: 124 DKPYHC 129
           D     
Sbjct: 90  DSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  109 bits (274), Expect = 2e-30
 Identities = 37/124 (29%), Positives = 46/124 (37%), Gaps = 31/124 (25%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
                P+ C  C   FSRK  L                               + HMR H
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKL-------------------------------KTHMRCH 31

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           TG +P++C  C       SSLN H R+H+ ERP+ C IC       S +T H  SH GD 
Sbjct: 32  TGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDS 91

Query: 241 PFGC 244
               
Sbjct: 92  GPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  107 bits (269), Expect = 1e-29
 Identities = 34/86 (39%), Positives = 44/86 (51%)

Query: 179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG 238
           +     P +C VC K F++K  L TH R HTG +PY C  CD   A  S +  H   H  
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 239 DKPFGCTSCHLTFTSKSQFAVHLRTH 264
           ++PF C  C     + SQ  VHLR+H
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 82.9 bits (206), Expect = 2e-20
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 28/96 (29%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          M+ H+G KPY C  CD +      L  H+R H+ ERPF+C +C       S         
Sbjct: 28 MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSS--------- 78

Query: 61 IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQC 96
                              L VH+R+HTG+     
Sbjct: 79 -------------------QLTVHLRSHTGDSGPSS 95

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  127 bits (322), Expect = 3e-37
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 12/121 (9%)

Query: 5   SGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMH 60
           S  +P+ C    C+  + +  +L++H R HTGE+P+QC    C +RFS+   L  H+R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 61  I---PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEV--CNKRFSQKSSLNTHKRI 115
               P+    C  C   F+   +L+ H RTHTGE+P+ C    C K+F++   L  H  +
Sbjct: 62  TGVKPFQ---CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

Query: 116 H 116
           H
Sbjct: 119 H 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  124 bits (314), Expect = 4e-36
 Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 42/154 (27%)

Query: 89  TGERPYQCE--VCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG--CDAAFSRKQYLEV 144
           + +RP+ C    CNKR+ + S L  H R H     T +KPY C    C+  FSR   L  
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKH-----TGEKPYQCDFKDCERRFSRSDQL-- 54

Query: 145 NHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTH 204
                                        + H R HTG +PFQC  C ++F++   L TH
Sbjct: 55  -----------------------------KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTH 85

Query: 205 KRVHTGERPYACDI--CDKRFAVKSYVTSHRWSH 236
            R HTGE+P++C    C K+FA    +  H   H
Sbjct: 86  TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  109 bits (276), Expect = 2e-30
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 37/149 (24%)

Query: 122 TEDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRT 179
           +E +P+ C   GC+  + +  +L                               Q+H R 
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHL-------------------------------QMHSRK 30

Query: 180 HTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHV 237
           HTGE+P+QC    C +RF++   L  H+R HTG +P+ C  C ++F+   ++ +H  +H 
Sbjct: 31  HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90

Query: 238 GDKPFGCTS--CHLTFTSKSQFAVHLRTH 264
           G+KPF C    C   F    +   H   H
Sbjct: 91  GEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  102 bits (256), Expect = 2e-27
 Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 181 TGERPFQC--AVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSH 236
           + +RPF C    C+KR+ + S L  H R HTGE+PY CD   C++RF+    +  H+  H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV--CGRSFVRDSYLIRHQ 290
            G KPF C +C   F+       H RT HT      C    C + F R   L+RH 
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRT-HTGEKPFSCRWPSCQKKFARSDELVRHH 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  123 bits (311), Expect = 1e-35
 Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 43/155 (27%)

Query: 66  YYCDA--CDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
             C    C   F     +  H+ TH G R + C  C K F + S L  H+ +     HT 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-----HTG 59

Query: 124 DKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT 181
           +KP+ CT  GC   FS    L                               + H+R HT
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNL-------------------------------RTHVRIHT 88

Query: 182 GERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPY 214
           G+RP+ C    C+K+F Q ++L +H   H   +  
Sbjct: 89  GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  123 bits (310), Expect = 2e-35
 Identities = 45/158 (28%), Positives = 61/158 (38%), Gaps = 43/158 (27%)

Query: 91  ERPYQC--EVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTT 148
            R   C  + C K F   S++  H   H        + + C  C  AF     L      
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH------GPRVHVCAECGKAFVESSKL------ 50

Query: 149 VLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKR 206
                                    + H   HTGE+PFQC    C KRF+   +L TH R
Sbjct: 51  -------------------------KRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR 85

Query: 207 VHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPF 242
           +HTG+RPY C    C+K+FA  + + SH  +H   K  
Sbjct: 86  IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  117 bits (296), Expect = 2e-33
 Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 14/127 (11%)

Query: 8   KPYHCTA--CDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI---P 62
           +   C    C   F     +  H+ TH G R   C  C K F + S L  H+ +H    P
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62

Query: 63  YIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEV--CNKRFSQKSSLNTHKRIHINYL 120
           + Q   + C   F+   NL  H+R HTG+RPY C    CNK+F+Q ++L +H        
Sbjct: 63  F-QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT----- 116

Query: 121 HTEDKPY 127
           H + K  
Sbjct: 117 HAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  115 bits (290), Expect = 2e-32
 Identities = 45/161 (27%), Positives = 59/161 (36%), Gaps = 47/161 (29%)

Query: 35  ERPFQCVV--CLKRFSQKSALNTHKRMH--IPYIQYYCDACDATFTTKQNLEVHMRTHTG 90
            R   C    C K F   SA+  H   H    ++   C  C   F     L+ H   HTG
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHV---CAECGKAFVESSKLKRHQLVHTG 59

Query: 91  ERPYQCEV--CNKRFSQKSSLNTHKRIHINYLHTEDKPYHC--TGCDAAFSRKQYLEVNH 146
           E+P+QC    C KRFS   +L TH RIH     T D+PY C   GC+  F++   L    
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIH-----TGDRPYVCPFDGCNKKFAQSTNL---- 110

Query: 147 TTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQ 187
                                      + H+ TH   +  Q
Sbjct: 111 ---------------------------KSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 99.1 bits (248), Expect = 3e-26
 Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 38/148 (25%)

Query: 123 EDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
           E +   C   GC   F     +                               + H+ TH
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAM-------------------------------RKHLHTH 30

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVG 238
            G R   CA C K F + S L  H+ VHTGE+P+ C    C KRF++   + +H   H G
Sbjct: 31  -GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89

Query: 239 DKPFGCTS--CHLTFTSKSQFAVHLRTH 264
           D+P+ C    C+  F   +    H+ TH
Sbjct: 90  DRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 89.5 bits (223), Expect = 1e-22
 Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 8/114 (7%)

Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
            R   C    C+K F   S++  H   H G R + C  C K F   S +  H+  H G+K
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61

Query: 241 PFGCTS--CHLTFTSKSQFAVHLRTHHTVGANHVCNV--CGRSFVRDSYLIRHQ 290
           PF CT   C   F+       H+R  HT    +VC    C + F + + L  H 
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRI-HTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  119 bits (301), Expect = 2e-34
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 24  YLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI---PYIQYYCDACDATFTTKQN 80
                      ++ F C  C + F++   L  H+R H    PY    CD C   F  + +
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT---CDICHKAFRRQDH 60

Query: 81  LEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
           L  H   H+ E+P++C+ C K F Q  +L  HK +     H +       
Sbjct: 61  LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL-----HMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  112 bits (282), Expect = 2e-31
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 36/141 (25%)

Query: 106 KSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAK 165
            S  +  +           K + C  C   F++   L                       
Sbjct: 2   SSGSSGGRLPS-----KTKKEFICKFCGRHFTKSYNL----------------------- 33

Query: 166 FLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAV 225
                    +H RTHT ERP+ C +C K F ++  L  H+ +H+ E+P+ C  C K F  
Sbjct: 34  --------LIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ 85

Query: 226 KSYVTSHRWSHVGDKPFGCTS 246
              +  H+  H+        S
Sbjct: 86  SRTLAVHKTLHMQTSSPTAAS 106

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  109 bits (274), Expect = 2e-30
 Identities = 33/91 (36%), Positives = 44/91 (48%)

Query: 174 QVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHR 233
                    ++ F C  C + FT+  +L  H+R HT ERPY CDIC K F  + ++  HR
Sbjct: 6   SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

Query: 234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           + H  +KPF C  C   F      AVH   H
Sbjct: 66  YIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.9 bits (219), Expect = 3e-22
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 1/93 (1%)

Query: 198 KSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQF 257
            S  +  +     ++ + C  C + F     +  H  +H  ++P+ C  CH  F  +   
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 258 AVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
             H    H+      C  CG+ F +   L  H+
Sbjct: 62  RDHRYI-HSKEKPFKCQECGKGFCQSRTLAVHK 93

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  116 bits (293), Expect = 4e-33
 Identities = 35/175 (20%), Positives = 52/175 (29%), Gaps = 67/175 (38%)

Query: 29  MRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTH 88
               +G++ + C  C K F+ KS                              + HM  H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKS----------------------------QRDRHMSMH 32

Query: 89  TGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTT 148
            G RPY C VC K+F  K  L  H +I     HT  KPY C  C   F  +         
Sbjct: 33  LGLRPYGCGVCGKKFKMKHHLVGHMKI-----HTGIKPYECNICAKRFMWRDSF------ 81

Query: 149 VLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNT 203
                                      H    +  + ++ A   +  T+ S  ++
Sbjct: 82  ---------------------------HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  114 bits (287), Expect = 4e-32
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
               SG+K Y C  C  SF  K   + HM  H G RP+ C VC K+F  K  L  H ++H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 61  IPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNT 111
                Y C+ C   F  + +   H    +  + Y+     +  ++ S  ++
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  103 bits (259), Expect = 6e-28
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
               +G++ + C  C K FT KS  + H  +H G RPY C +C K+F +K ++  H   H
Sbjct: 2   SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYL 286
            G KP+ C  C   F  +  F  H     +   ++      ++    S  
Sbjct: 61  TGIKPYECNICAKRFMWRDSF--HRHV-TSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score =  102 bits (258), Expect = 6e-28
 Identities = 36/174 (20%), Positives = 51/174 (29%), Gaps = 67/174 (38%)

Query: 85  MRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEV 144
               +G++ Y C+                                  C  +F+ K     
Sbjct: 2   SSGSSGDKLYPCQ----------------------------------CGKSFTHKSQR-- 25

Query: 145 NHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTH 204
                                          HM  H G RP+ C VC K+F  K  L  H
Sbjct: 26  -----------------------------DRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 56

Query: 205 KRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFA 258
            ++HTG +PY C+IC KRF  +     HR      K +         T  S  +
Sbjct: 57  MKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  108 bits (273), Expect = 2e-30
 Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 30/111 (27%)

Query: 8   KPYHCTA--CDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQ 65
           +PY C    CD  F +   L  H+R HTG++PFQC +C++ FS+   L TH         
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH--------- 53

Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
                              +RTHTGE+P+ C++C ++F++      H +IH
Sbjct: 54  -------------------IRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  104 bits (262), Expect = 9e-29
 Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 38/124 (30%)

Query: 91  ERPYQCEV--CNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTT 148
           ERPY C V  C++RFSQ  SL  H RIH     T  KP+ C  C   FSR  +L      
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIH-----TGQKPFQCRICMRNFSRSDHL------ 50

Query: 149 VLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVH 208
                                      H+RTHTGE+PF C +C ++F +      H ++H
Sbjct: 51  -------------------------TTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

Query: 209 TGER 212
             ++
Sbjct: 86  LRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 95.2 bits (238), Expect = 3e-25
 Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 33/118 (27%)

Query: 125 KPYHCTG--CDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTG 182
           +PY C    CD  FS+   L                                 H+R HTG
Sbjct: 3   RPYACPVESCDRRFSQSGSL-------------------------------TRHIRIHTG 31

Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ++PFQC +C + F++   L TH R HTGE+P+ACDIC ++FA       H   H+  K
Sbjct: 32  QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 92.9 bits (232), Expect = 2e-24
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 38/121 (31%)

Query: 66  YYCDA--CDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTE 123
           Y C    CD  F+   +L  H+R HTG++P+QC +C + FS+   L TH R H     T 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH-----TG 59

Query: 124 DKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE 183
           +KP+ C  C   F+R                                   + H + H  +
Sbjct: 60  EKPFACDICGRKFARSDER-------------------------------KRHTKIHLRQ 88

Query: 184 R 184
           +
Sbjct: 89  K 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 92.5 bits (231), Expect = 3e-24
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           ERP+ C V  C +RF+Q  SL  H R+HTG++P+ C IC + F+   ++T+H  +H G+K
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 241 PFGCTSCHLTFTSKSQFAVHLRTH 264
           PF C  C   F    +   H + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 81.0 bits (201), Expect = 9e-20
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          +++H+G KP+ C  C  +F R  +L  H+RTHTGE+PF C +C ++F++      H ++H
Sbjct: 26 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGER 36
          ++ H+G KP+ C  C   F R    + H + H  ++
Sbjct: 54 IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  103 bits (260), Expect = 2e-28
 Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)

Query: 88  HTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHT 147
            +G     CE+C K F     LN HK       H+ +KPY C  C   F RK  +     
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS-----HSGEKPYSCPVCGLRFKRKDRM----- 51

Query: 148 TVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGE--RPFQCAVCSKRFTQKSSLNTH- 204
                                       H+R+H G   +P+ C  C K F++   LN H 
Sbjct: 52  --------------------------SYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI 85

Query: 205 KRVHTGER 212
           K+VH+G  
Sbjct: 86  KQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  101 bits (254), Expect = 2e-27
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 31/116 (26%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPY 63
            SG+    C  C   F    +L  H  +H+GE+P+ C VC  RF +K  ++ H       
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH------- 54

Query: 64  IQYYCDACDATFTTKQNLEVHMRTHTGE--RPYQCEVCNKRFSQKSSLNTH-KRIH 116
                                +R+H G   +PY C+ C K FS+   LN H K++H
Sbjct: 55  ---------------------VRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 96.0 bits (240), Expect = 2e-25
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG- 238
            +G     C +C K F     LN HK  H+GE+PY+C +C  RF  K  ++ H  SH G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 239 -DKPFGCTSCHLTFTSKSQFAVHLRTHHT 266
             KP+ C SC   F+       H++  H+
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 92.6 bits (231), Expect = 4e-24
 Identities = 31/113 (27%), Positives = 40/113 (35%), Gaps = 35/113 (30%)

Query: 32  HTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGE 91
            +G     C +C K F     LN H                              +H+GE
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRH----------------------------KLSHSGE 33

Query: 92  RPYQCEVCNKRFSQKSSLNTHKRIHINYLHT--EDKPYHCTGCDAAFSRKQYL 142
           +PY C VC  RF +K  ++ H R      H     KPY C  C   FSR  +L
Sbjct: 34  KPYSCPVCGLRFKRKDRMSYHVRS-----HDGSVGKPYICQSCGKGFSRPDHL 81

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 89.1 bits (222), Expect = 9e-23
 Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 34/123 (27%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            +      C  C   F    +L                                 H  +H
Sbjct: 2   SSGSSGVACEICGKIFRDVYHL-------------------------------NRHKLSH 30

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGE--RPYACDICDKRFAVKSYVTSH-RWSHV 237
           +GE+P+ C VC  RF +K  ++ H R H G   +PY C  C K F+   ++  H +  H 
Sbjct: 31  SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

Query: 238 GDK 240
           G  
Sbjct: 91  GPS 93

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  101 bits (255), Expect = 9e-28
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 34/119 (28%)

Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDK 125
           + C  C   F+   +L  H+RTHTGE+P+ C++C ++F++      H+ I          
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-----QHI-L 57

Query: 126 PYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGER 184
           P      +   S+                               L +    ++   GER
Sbjct: 58  PILEDKVEELLSK----------------------------NYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 99.1 bits (248), Expect = 1e-26
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 32/112 (28%)

Query: 8   KPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYY 67
           KP+ C  C  +F R  +L  H+RTHTGE+PF C +C ++F++                  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD---------------- 45

Query: 68  CDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHK---RIH 116
                         + H        P   +   +  S+   L       +  
Sbjct: 46  ------------ERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 94.5 bits (236), Expect = 6e-25
 Identities = 24/124 (19%), Positives = 37/124 (29%), Gaps = 40/124 (32%)

Query: 92  RPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLA 151
           +P+QC +C + FS+   L TH R      HT +KP+ C  C   F+R             
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRT-----HTGEKPFACDICGRKFARSDER--------- 47

Query: 152 VMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHK---RVH 208
                                 + H        P       +  ++   L       +  
Sbjct: 48  ----------------------KRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84

Query: 209 TGER 212
            GER
Sbjct: 85  VGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 89.1 bits (222), Expect = 8e-23
 Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 35/119 (29%)

Query: 125 KPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGER 184
           KP+ C  C   FSR  +L                                 H+RTHTGE+
Sbjct: 2   KPFQCRICMRNFSRSDHL-------------------------------TTHIRTHTGEK 30

Query: 185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS---HVGDK 240
           PF C +C ++F +      H+ +     P   D  ++  +   ++ +        VG++
Sbjct: 31  PFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 84.5 bits (210), Expect = 3e-21
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG 243
           +PFQC +C + F++   L TH R HTGE+P+ACDIC ++FA       HR       P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60

Query: 244 CTSCHLTFTSKSQFAVH---LRTH 264
                   +           L+  
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANH 271
           +P+ C IC + F+   ++T+H  +H G+KPF C  C   F    +   H    H      
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--ILPI 59

Query: 272 VCNVCGRSFVRDSYLIRHQ 290
           + +       ++ +L    
Sbjct: 60  LEDKVEELLSKNYHLENEV 78

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 98.7 bits (247), Expect = 1e-26
 Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 174 QVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE--RPYACDICDKRFAVKSYVTS 231
               RTH+GE+P++C +C  RFTQ  ++  H      E    + C  CD   A KS +  
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63

Query: 232 H-RWSHVGDKPF 242
           H R  H    P 
Sbjct: 64  HLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 95.3 bits (238), Expect = 2e-25
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 34/105 (32%)

Query: 25  LEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVH 84
                RTH+GE+P++C +C  RF+Q                               +++H
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSG----------------------------TMKMH 34

Query: 85  MRTHTGE--RPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
           +     E    + C  C+   ++KS L  H R      H+   P 
Sbjct: 35  ILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ----HSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 92.6 bits (231), Expect = 2e-24
 Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 37/109 (33%)

Query: 80  NLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTED-KPYHCTGCDAAFSR 138
           +     RTH+GE+PY+C +C+ RF+Q  ++  H        HTE+   +HC  CD   +R
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK----HTENVAKFHCPHCDTVIAR 57

Query: 139 KQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRT-HTGERPF 186
           K  L                                VH+R  H+   P 
Sbjct: 58  KSDL-------------------------------GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.1 bits (196), Expect = 3e-19
 Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 39/111 (35%)

Query: 108 SLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFL 167
           S  +  R H     + +KPY C  C A F++   +                         
Sbjct: 2   SSGSSGRTH-----SGEKPYECYICHARFTQSGTM------------------------- 31

Query: 168 TSLFSHQVHMRTHTGE--RPFQCAVCSKRFTQKSSLNTH-KRVHTGERPYA 215
                 ++H+     E    F C  C     +KS L  H ++ H+   P +
Sbjct: 32  ------KMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 76.8 bits (190), Expect = 2e-18
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 200 SLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG--DKPFGCTSCHLTFTSKSQF 257
           S  +  R H+GE+PY C IC  RF     +  H           F C  C      KS  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 258 AVHLRTHHT 266
            VHLR  H+
Sbjct: 62  GVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 76.8 bits (190), Expect = 2e-18
 Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 29/96 (30%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE--RPFQCVVCLKRFSQKSALNTHKR 58
           + HSG KPY C  C A F +   +++H+     E    F C  C    ++KS L  H R
Sbjct: 7  GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR 66

Query: 59 MHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPY 94
                                     + H+   P 
Sbjct: 67 ---------------------------KQHSYSGPS 75

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 96.0 bits (240), Expect = 1e-25
 Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 28/107 (26%)

Query: 10  YHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCD 69
           + C  C  SF R   L  H+  H+  RP+ C  C KRF QKS                  
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKS------------------ 43

Query: 70  ACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
                     +++ H   HTGE+P++C+VC K FSQ S+L TH R H
Sbjct: 44  ----------DMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 92.9 bits (232), Expect = 2e-24
 Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 36/117 (30%)

Query: 94  YQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVM 153
           + C++C K F + S+L+TH  IH     ++ +PY C  C   F +K  +           
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIH-----SDTRPYPCQYCGKRFHQKSDM----------- 45

Query: 154 QPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTG 210
                               + H   HTGE+P +C VC K F+Q S+L TH R HTG
Sbjct: 46  --------------------KKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 85.9 bits (214), Expect = 9e-22
 Identities = 32/79 (40%), Positives = 42/79 (53%)

Query: 186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           F C +C K F + S+L+TH  +H+  RPY C  C KRF  KS +  H + H G+KP  C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 246 SCHLTFTSKSQFAVHLRTH 264
            C   F+  S    H R H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 84.4 bits (210), Expect = 3e-21
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDK 125
           + C  C  +F     L  H+  H+  RPY C+ C KRF QKS +  H  IH     T +K
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH-----TGEK 56

Query: 126 PYHCTGCDAAFSRKQYL 142
           P+ C  C  AFS+   L
Sbjct: 57  PHKCQVCGKAFSQSSNL 73

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 84.0 bits (209), Expect = 5e-21
 Identities = 26/64 (40%), Positives = 37/64 (57%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRW 234
            H+  H+  RP+ C  C KRF QKS +  H  +HTGE+P+ C +C K F+  S + +H  
Sbjct: 19  THLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR 78

Query: 235 SHVG 238
            H G
Sbjct: 79  KHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.2 bits (186), Expect = 1e-17
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          HS  +PY C  C   F +K  ++ H   HTGE+P +C VC K FSQ S L TH R H
Sbjct: 24 HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.9 bits (92), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTG 34
            +H+G KP+ C  C  +F +   L  H R HTG
Sbjct: 49 TFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 95.7 bits (239), Expect = 3e-25
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 30/115 (26%)

Query: 4   HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMHI 61
            +         C  ++ +  +L+ H+RTHTGE+P+ C    C  +F++   L  H     
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH----- 56

Query: 62  PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
                                   R HTG RP+QC+ C++ FS+   L  H + H
Sbjct: 57  -----------------------YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 89.1 bits (222), Expect = 7e-23
 Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 2/87 (2%)

Query: 180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHV 237
            T       A C K +T+ S L  H R HTGE+PY CD   C  +FA    +T H   H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 238 GDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           G +PF C  C   F+     A+H++ H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 85.7 bits (213), Expect = 2e-21
 Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 33/118 (27%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            T        GC   +++  +L                               + H+RTH
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHL-------------------------------KAHLRTH 30

Query: 181 TGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
           TGE+P+ C    C  +F +   L  H R HTG RP+ C  CD+ F+   ++  H   H
Sbjct: 31  TGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 78.0 bits (193), Expect = 1e-18
 Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 11/89 (12%)

Query: 56  HKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHK 113
               H          C  T+T   +L+ H+RTHTGE+PY C  + C  +F++   L  H 
Sbjct: 2   RTATHT----CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

Query: 114 RIHINYLHTEDKPYHCTGCDAAFSRKQYL 142
           R H     T  +P+ C  CD AFSR  +L
Sbjct: 58  RKH-----TGHRPFQCQKCDRAFSRSDHL 81

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 71.4 bits (176), Expect = 3e-16
 Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 1  MKLHSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKR 58
          ++ H+G KPYHC    C   F R   L  H R HTG RPFQC  C + FS+   L  H +
Sbjct: 27 LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 86

Query: 59 MH 60
           H
Sbjct: 87 RH 88

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 93.7 bits (234), Expect = 1e-24
 Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 25  LEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH----IPYIQYYCDACDATFTTKQN 80
                RTHTGE+P+ C  C K F QK  L+ H + +         + C  C  TFT +  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 81  LEVHMRTHTGERPYQCEVCNKRF 103
           +  H     G    + E      
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 93.4 bits (233), Expect = 1e-24
 Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 32/116 (27%)

Query: 80  NLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRK 139
           +     RTHTGE+PY C  C+K F QK  L+ H + + +  +     + C+ C   F+R+
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD-PNFVPAAFVCSKCGKTFTRR 60

Query: 140 QYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRF 195
             +                                 H     G    +        
Sbjct: 61  NTM-------------------------------ARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 90.3 bits (225), Expect = 3e-23
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 174 QVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE----RPYACDICDKRFAVKSYV 229
               RTHTGE+P+ C+ C K F QK  L+ H + +         + C  C K F  ++ +
Sbjct: 4   GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63

Query: 230 TSHRWSHVGDKPFGCTSC 247
             H  +  G       + 
Sbjct: 64  ARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 87.6 bits (218), Expect = 2e-22
 Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 40/120 (33%)

Query: 108 SLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFL 167
           S  +  R H     T +KPY C+ CD  F +KQ L                         
Sbjct: 2   SSGSSGRTH-----TGEKPYACSHCDKTFRQKQLL------------------------- 31

Query: 168 TSLFSHQVHMRTHTGE----RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRF 223
                  +H + +         F C+ C K FT+++++  H     G      +      
Sbjct: 32  ------DMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 74.9 bits (185), Expect = 2e-17
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 200 SLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG----DKPFGCTSCHLTFTSKS 255
           S  +  R HTGE+PYAC  CDK F  K  +  H   +         F C+ C  TFT ++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 256 QFAVHLRTHHTVGANHVCNVCGRSF 280
             A H                G S 
Sbjct: 62  TMARHADN-CAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.1 bits (131), Expect = 5e-10
 Identities = 6/44 (13%), Positives = 13/44 (29%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRF 47
          +     + C+ C  +F R+  +  H     G    +        
Sbjct: 42 NFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 92.5 bits (231), Expect = 3e-24
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 170 LFSH-QVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSY 228
           +  H   H      ++P++C  C   F  K +L +HK VHTGE+PY C+IC  +F   + 
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60

Query: 229 VTSHRWSHVGDKPF 242
           + +H   H G+KP+
Sbjct: 61  LKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 88.7 bits (221), Expect = 6e-23
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 33/104 (31%)

Query: 24  YLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEV 83
           +   H      ++P++C  C   F  K                             NL  
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKG----------------------------NLAS 35

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
           H   HTGE+PY+C +C  +F++ ++L TH RI     H+ +KPY
Sbjct: 36  HKTVHTGEKPYRCNICGAQFNRPANLKTHTRI-----HSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 84.4 bits (210), Expect = 3e-21
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 36/107 (33%)

Query: 80  NLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRK 139
           +   H      ++PY+C+ C   F  K +L +HK +H     T +KPY C  C A F+R 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH-----TGEKPYRCNICGAQFNRP 58

Query: 140 QYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPF 186
             L                               + H R H+GE+P+
Sbjct: 59  ANL-------------------------------KTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 75.2 bits (186), Expect = 8e-18
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            +   +KPY C  C ASF  K  L  H   HTGE+P++C +C  +F++ + L TH R+H
Sbjct: 9  SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 73.3 bits (181), Expect = 5e-17
 Identities = 20/66 (30%), Positives = 29/66 (43%)

Query: 199 SSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFA 258
              + H  +   ++PY CD C   F  K  + SH+  H G+KP+ C  C   F   +   
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 259 VHLRTH 264
            H R H
Sbjct: 63  THTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 225 VKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDS 284
           +  +   H      DKP+ C  C  +F  K   A H    HT    + CN+CG  F R +
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV-HTGEKPYRCNICGAQFNRPA 59

Query: 285 YLIRHQ 290
            L  H 
Sbjct: 60  NLKTHT 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 91.0 bits (227), Expect = 9e-24
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHV 237
            + +   P +C+ CS   + K++L  H+R+H  +RP+ C+ C       S ++ H     
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 238 GDKPFGCT 245
           GD     +
Sbjct: 62  GDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 88.3 bits (220), Expect = 9e-23
 Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 33/102 (32%)

Query: 30  RTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHT 89
            + +   P +C  C    S K+AL                             +H R H 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALR----------------------------IHERIHC 33

Query: 90  GERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
            +RP++C  C+    Q S+L+ H +         D     +G
Sbjct: 34  TDRPFKCNYCSFDTKQPSNLSKHMKK-----FHGDMSGPSSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 80.6 bits (200), Expect = 6e-20
 Identities = 20/57 (35%), Positives = 25/57 (43%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
           S   P  C+ C  S   K  L IH R H  +RPF+C  C     Q S L+ H +  
Sbjct: 4  GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 77.5 bits (192), Expect = 8e-19
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 36/104 (34%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVN 145
            + +   P +C  C+   S K++L  H+RI     H  D+P+ C  C     +   L   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERI-----HCTDRPFKCNYCSFDTKQPSNL--- 53

Query: 146 HTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCA 189
                                         HM+   G+     +
Sbjct: 54  ----------------------------SKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 77.2 bits (191), Expect = 1e-18
 Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 31/96 (32%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            +   P  C+ C  + S K  L                               ++H R H
Sbjct: 4   GSSGHPEKCSECSYSCSSKAAL-------------------------------RIHERIH 32

Query: 181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
             +RPF+C  CS    Q S+L+ H +   G+     
Sbjct: 33  CTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 14/60 (23%), Positives = 22/60 (36%)

Query: 206 RVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH 265
              +   P  C  C    + K+ +  H   H  D+PF C  C       S  + H++  H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.0 bits (123), Expect = 6e-09
 Identities = 8/40 (20%), Positives = 16/40 (40%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           ++H  ++P+ C  C     +   L  HM+   G+     
Sbjct: 29 ERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 90.0 bits (224), Expect = 4e-23
 Identities = 37/139 (26%), Positives = 51/139 (36%), Gaps = 42/139 (30%)

Query: 73  ATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT-- 130
            +  +        R H  + P     C K +++ S L  H R H     T +KPY CT  
Sbjct: 1   GSSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTH-----TGEKPYKCTWE 51

Query: 131 GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAV 190
           GCD  F+R   L                                 H R HTG +PFQC V
Sbjct: 52  GCDWRFARSDEL-------------------------------TRHYRKHTGAKPFQCGV 80

Query: 191 CSKRFTQKSSLNTHKRVHT 209
           C++ F++   L  H + H 
Sbjct: 81  CNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 88.5 bits (220), Expect = 2e-22
 Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 34/120 (28%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVV--CLKRFSQKSALNTHKR 58
            ++H  + P     C   + +  +L+ H+RTHTGE+P++C    C  RF++         
Sbjct: 13  RRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD------- 61

Query: 59  MHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHIN 118
                                 L  H R HTG +P+QC VCN+ FS+   L  H + H N
Sbjct: 62  ---------------------ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 84.6 bits (210), Expect = 5e-21
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHR 233
             R H  + P     C+K +T+ S L  H R HTGE+PY C    CD RFA    +T H 
Sbjct: 12  KRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY 67

Query: 234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
             H G KPF C  C+ +F+     A+H++ H
Sbjct: 68  RKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 83.4 bits (207), Expect = 1e-20
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 42/136 (30%)

Query: 103 FSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTW 162
                     +RIH              GC   +++  +L                    
Sbjct: 3   SGSSGPDLEKRRIHYC---------DYPGCTKVYTKSSHL-------------------- 33

Query: 163 SAKFLTSLFSHQVHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICD 220
                      + H+RTHTGE+P++C    C  RF +   L  H R HTG +P+ C +C+
Sbjct: 34  -----------KAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82

Query: 221 KRFAVKSYVTSHRWSH 236
           + F+   ++  H   H
Sbjct: 83  RSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 82.7 bits (205), Expect = 3e-20
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 11/98 (11%)

Query: 47  FSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFS 104
                     +R+H          C   +T   +L+ H+RTHTGE+PY+C  E C+ RF+
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 105 QKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYL 142
           +   L  H R H     T  KP+ C  C+ +FSR  +L
Sbjct: 59  RSDELTRHYRKH-----TGAKPFQCGVCNRSFSRSDHL 91

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.0 bits (159), Expect = 9e-14
 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 7/98 (7%)

Query: 195 FTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT--SCHLTFT 252
                     +R+H  + P     C K +   S++ +H  +H G+KP+ CT   C   F 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 253 SKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
              +   H R  HT      C VC RSF R  +L  H 
Sbjct: 59  RSDELTRHYRK-HTGAKPFQCGVCNRSFSRSDHLALHM 95

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 89.1 bits (222), Expect = 4e-23
 Identities = 27/68 (39%), Positives = 38/68 (55%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS 235
               H+GE+P+ C  C K F++ S L  H+RVHTGE+PY C  C K F+  S + +H+  
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

Query: 236 HVGDKPFG 243
           H      G
Sbjct: 65  HTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 82.9 bits (206), Expect = 8e-21
 Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 33/103 (32%)

Query: 25  LEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVH 84
                  H+GE+P+ CV C K FS+ S L  H+R                          
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR-------------------------- 35

Query: 85  MRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
              HTGE+PY+C  C K FSQ S L  H+RI     HT     
Sbjct: 36  --VHTGEKPYKCLECGKAFSQNSGLINHQRI-----HTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 79.8 bits (198), Expect = 1e-19
 Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 36/107 (33%)

Query: 109 LNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLT 168
            +    IH     + +KPY C  C  AFSR                             +
Sbjct: 2   SSGSSGIH-----SGEKPYGCVECGKAFSRS----------------------------S 28

Query: 169 SLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
            L  HQ   R HTGE+P++C  C K F+Q S L  H+R+HT      
Sbjct: 29  ILVQHQ---RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 72.9 bits (180), Expect = 5e-17
 Identities = 29/59 (49%), Positives = 37/59 (62%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
           +HSG KPY C  C  +F R   L  H R HTGE+P++C+ C K FSQ S L  H+R+H
Sbjct: 7  GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 69.0 bits (170), Expect = 2e-15
 Identities = 22/64 (34%), Positives = 32/64 (50%)

Query: 201 LNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVH 260
            +    +H+GE+PY C  C K F+  S +  H+  H G+KP+ C  C   F+  S    H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 261 LRTH 264
            R H
Sbjct: 62  QRIH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 87.9 bits (219), Expect = 1e-22
 Identities = 25/67 (37%), Positives = 34/67 (50%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS 235
                   R ++C  C K F+  S L+ H+R HTGE+PY CD C K F  +S++  H   
Sbjct: 9   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

Query: 236 HVGDKPF 242
           H G  P 
Sbjct: 69  HTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 86.3 bits (215), Expect = 5e-22
 Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 33/103 (32%)

Query: 25  LEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVH 84
                      R ++C  C K FS  S L+ H+R                          
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-------------------------- 39

Query: 85  MRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
             THTGE+PY+C+ C K F Q+S L  H R+     HT   P 
Sbjct: 40  --THTGEKPYKCDECGKAFIQRSHLIGHHRV-----HTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 85.2 bits (212), Expect = 1e-21
 Identities = 30/110 (27%), Positives = 37/110 (33%), Gaps = 36/110 (32%)

Query: 105 QKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSA 164
              S    +         E + Y C  C  +FS    L                      
Sbjct: 2   SSGSSGRSEWQQ-----RERRRYKCDECGKSFSHSSDL---------------------- 34

Query: 165 KFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPY 214
                      H RTHTGE+P++C  C K F Q+S L  H RVHTG  P 
Sbjct: 35  ---------SKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.6 bits (200), Expect = 1e-19
 Identities = 27/107 (25%), Positives = 36/107 (33%), Gaps = 36/107 (33%)

Query: 80  NLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRK 139
           +           R Y+C+ C K FS  S L+ H+R H     T +KPY C  C  AF ++
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH-----TGEKPYKCDECGKAFIQR 59

Query: 140 QYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPF 186
                                       + L  H    R HTG  P 
Sbjct: 60  ----------------------------SHLIGHH---RVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 73.6 bits (182), Expect = 3e-17
 Identities = 22/68 (32%), Positives = 30/68 (44%)

Query: 197 QKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQ 256
              S    +      R Y CD C K F+  S ++ HR +H G+KP+ C  C   F  +S 
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 257 FAVHLRTH 264
              H R H
Sbjct: 62  LIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 71.3 bits (176), Expect = 2e-16
 Identities = 24/59 (40%), Positives = 30/59 (50%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
                + Y C  C  SF     L  H RTHTGE+P++C  C K F Q+S L  H R+H
Sbjct: 11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 85.5 bits (212), Expect = 1e-21
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHT---GERPYACDICDKRFAVKSYVTSHRWSH 236
            +G    QC +C     QK+SLN H+R H        + C+ C KRF     V +HR   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 237 VGDKPFGCTSC 247
                      
Sbjct: 62  HPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 83.2 bits (206), Expect = 1e-20
 Identities = 19/104 (18%), Positives = 27/104 (25%), Gaps = 35/104 (33%)

Query: 32  HTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHT-- 89
            +G    QC +C     QK+                            +L  H R H   
Sbjct: 2   SSGSSGLQCEICGFTCRQKA----------------------------SLNWHQRKHAET 33

Query: 90  -GERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGC 132
                + CE C KRF +  S+  H+       H           
Sbjct: 34  VAALRFPCEFCGKRFEKPDSVAAHRSKS----HPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 77.1 bits (190), Expect = 2e-18
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHT---GERPFQCVVCLKRFSQKSALNTHKRMH 60
           SG+    C  C  +  +K  L  H R H        F C  C KRF +  ++  H+   
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 61 IPYIQYYCDAC 71
           P +       
Sbjct: 62 HPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 72.1 bits (177), Expect = 2e-16
 Identities = 18/106 (16%), Positives = 25/106 (23%), Gaps = 33/106 (31%)

Query: 88  HTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHT 147
            +G    QCE+C     QK+SLN H+R H          + C  C   F +   +     
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAE--TVAALRFPCEFCGKRFEKPDSV----- 54

Query: 148 TVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSK 193
                                       H               S 
Sbjct: 55  --------------------------AAHRSKSHPALLLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 66.7 bits (163), Expect = 1e-14
 Identities = 16/99 (16%), Positives = 21/99 (21%), Gaps = 34/99 (34%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            +      C  C     +K  L                                 H R H
Sbjct: 2   SSGSSGLQCEICGFTCRQKASL-------------------------------NWHQRKH 30

Query: 181 T---GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
                   F C  C KRF +  S+  H+         A 
Sbjct: 31  AETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.9 bits (109), Expect = 4e-07
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGAN--HVCNVCGRSFVRDSYLIRHQNK 292
             G     C  C  T   K+    H R H    A     C  CG+ F +   +  H++K
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 84.5 bits (210), Expect = 3e-21
 Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 36/109 (33%)

Query: 32  HTGERPFQCVV--CLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHT 89
            +G     C    C + FS +  LN HK+                             H 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKY---------------------------QHI 34

Query: 90  GERPYQCE--VCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAF 136
            ++ + C    C K F+ K  L  H ++     H++ + Y C     + 
Sbjct: 35  HQKSFSCPEPACGKSFNFKKHLKEHMKL-----HSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 84.1 bits (209), Expect = 4e-21
 Identities = 22/108 (20%), Positives = 31/108 (28%), Gaps = 36/108 (33%)

Query: 121 HTEDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMR 178
            +      C   GC   FS +QYL                                 H +
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYL-------------------------------NHHKK 30

Query: 179 -THTGERPFQC--AVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRF 223
             H  ++ F C    C K F  K  L  H ++H+  R Y C+      
Sbjct: 31  YQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 83.8 bits (208), Expect = 5e-21
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 180 HTGERPFQCAV--CSKRFTQKSSLNTHKRV-HTGERPYACD--ICDKRFAVKSYVTSHRW 234
            +G     C    C + F+ +  LN HK+  H  ++ ++C    C K F  K ++  H  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 235 SHVGDKPFGCTSC 247
            H   + + C   
Sbjct: 62  LHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 83.4 bits (207), Expect = 8e-21
 Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 39/112 (34%)

Query: 88  HTGERPYQCEV--CNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT--GCDAAFSRKQYLE 143
            +G     C+   C + FS +  LN HK+      H   K + C    C  +F+ K++L 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQ----HIHQKSFSCPEPACGKSFNFKKHL- 56

Query: 144 VNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRF 195
                                         + HM+ H+  R + C       
Sbjct: 57  ------------------------------KEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 83.0 bits (206), Expect = 1e-20
 Identities = 23/105 (21%), Positives = 33/105 (31%), Gaps = 33/105 (31%)

Query: 4   HSGNKPYHCTA--CDASFCRKPYLEIHMR-THTGERPFQC--VVCLKRFSQKSALNTHKR 58
            SG+    C    C   F  + YL  H +  H  ++ F C    C K F+ K        
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKK------- 54

Query: 59  MHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRF 103
                                +L+ HM+ H+  R Y CE      
Sbjct: 55  ---------------------HLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 30/86 (34%)

Query: 208 HTGERPYACDI--CDKRFAVKSYVTSH-RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
            +G     CD   C + F+ + Y+  H ++ H+  K F C                    
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA---------------- 45

Query: 265 HTVGANHVCNVCGRSFVRDSYLIRHQ 290
                      CG+SF    +L  H 
Sbjct: 46  -----------CGKSFNFKKHLKEHM 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 82.6 bits (205), Expect = 9e-21
 Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 26/87 (29%)

Query: 30  RTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHT 89
            T  GE  ++C VC + ++  S    H                                 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTS--------------------------HKR 36

Query: 90  GERPYQCEVCNKRFSQKSSLNTHKRIH 116
             + Y C  C K F++K ++  H +I 
Sbjct: 37  NVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 78.7 bits (195), Expect = 3e-19
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRV--HTGERPYACDICDKRFAVKSYVTSHRWS 235
            T  GE  ++C VCS+ +T  S+   H         + Y C  C K F  K  +T+H   
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 236 H 236
            
Sbjct: 63  I 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 76.4 bits (189), Expect = 2e-18
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYL 142
            T  GE  Y+C+VC++ ++  S+   H            K Y C  C   F+RK  +
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSH---KRNVKVYPCPFCFKEFTRKDNM 56

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 70.3 bits (173), Expect = 4e-16
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRT--HTGERPFQCVVCLKRFSQKSALNTHKRMH 60
            G   Y C  C   +        H  T      + + C  C K F++K  +  H ++ 
Sbjct: 5  KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 65.7 bits (161), Expect = 2e-14
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 205 KRVHTGERPYACDICDKRFAVKSYVTSHR--WSHVGDKPFGCTSCHLTFTSKSQFAVHLR 262
           +    GE  Y C +C + +   S    H         K + C  C   FT K     H++
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 263 THHTV 267
             H +
Sbjct: 62  IIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 61.8 bits (151), Expect = 5e-13
 Identities = 12/92 (13%), Positives = 22/92 (23%), Gaps = 33/92 (35%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRT- 179
              +  Y C  C   ++                                      H  T 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNF-------------------------------CRHYVTS 33

Query: 180 -HTGERPFQCAVCSKRFTQKSSLNTHKRVHTG 210
                + + C  C K FT+K ++  H ++   
Sbjct: 34  HKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 1/56 (1%)

Query: 236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGAN-HVCNVCGRSFVRDSYLIRHQ 290
             G+  + C  C   +T  S F  H  T H      + C  C + F R   +  H 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 8/31 (25%), Positives = 11/31 (35%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTG 34
              K Y C  C   F RK  +  H++    
Sbjct: 35 KRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 71.8 bits (177), Expect = 6e-17
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
              +  GE+P+ C +C  RF    +L +H R+HTG  P +
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 65.2 bits (160), Expect = 2e-14
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
              +  GE+PY CE+C  RF    +L +H RI     HT   P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-----HTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 28/67 (41%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GE+P+ C +C  RF                                 L+ H+R 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQ----------------------------TLKSHLRI 33

Query: 88 HTGERPY 94
          HTG  P 
Sbjct: 34 HTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.3 bits (124), Expect = 2e-09
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPF 38
            G KPY C  C   F     L+ H+R HTG  P 
Sbjct: 6  SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.4 bits (119), Expect = 9e-09
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
                 GE+PY C+IC  RF     + SH   H G  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/66 (21%), Positives = 17/66 (25%), Gaps = 31/66 (46%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
              +KPY C  C   F   Q L                               + H+R H
Sbjct: 6   SGGEKPYPCEICGTRFRHLQTL-------------------------------KSHLRIH 34

Query: 181 TGERPF 186
           TG  P 
Sbjct: 35  TGSGPS 40

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 71.8 bits (177), Expect = 7e-17
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
               + TGE+PF+C +C K F  +S LN H  VHT E+P    
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 8e-15
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
               + TGE+P++C++C K F  +S LN H  +     HT +KP   + 
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-----HTAEKPSGPSS 45

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ CDIC K F  +S +  H   H  +KP G +S
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+PF+C +C K F  +S LN H                               
Sbjct: 3  SGSSGTGEKPFKCDICGKSFCGRSRLNRHS----------------------------MV 34

Query: 88 HTGERPYQCE 97
          HT E+P    
Sbjct: 35 HTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KP+ C  C  SFC +  L  H   HT E+P   
Sbjct: 5  SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 12/78 (15%), Positives = 18/78 (23%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KP+ C  C  +F  +  L                            
Sbjct: 2   SSGSSG-----TGEKPFKCDICGKSFCGRSRL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HT E+P   
Sbjct: 29  ---NRHSMVHTAEKPSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
              +  GE+P++C  C  RF Q + L  H  +HTG  P +
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 64.5 bits (158), Expect = 3e-14
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
              +  GE+PY+CE C  RF Q + L  H  I     HT   P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-----HTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 28/67 (41%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GE+P++C  C  RF Q +                            +L  H+  
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVA----------------------------HLRAHVLI 33

Query: 88 HTGERPY 94
          HTG  P 
Sbjct: 34 HTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPF 38
               G KPY C  C A F +  +L  H+  HTG  P 
Sbjct: 3  SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
                 GE+PY C+ C  RF   +++ +H   H G  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 7/81 (8%)

Query: 68  CDACDATFTTKQNLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIHINYLHTEDK 125
            + C   F     L+VH  +HT + PY+C  E C+KRFS  S L  H+++     H    
Sbjct: 6   FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-----HAGYP 60

Query: 126 PYHCTGCDAAFSRKQYLEVNH 146
                 C            + 
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHV 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 70.0 bits (172), Expect = 8e-16
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 174 QVHMRTHTGERPFQC--AVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTS 231
           +VH  +HT + P++C    C KRF+  S L  H++VH G      D C       +    
Sbjct: 20  KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 79

Query: 232 HR 233
           H 
Sbjct: 80  HV 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 191 CSKRFTQKSSLNTHKRVHTGERPYACD--ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCH 248
           C K F + + L  H+  HT + PY C    CDKRF++ S +  H   H G       SC 
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 249 LTFTSKSQFAVHLRTHH 265
               + + +  H+   H
Sbjct: 69  FVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 68.4 bits (168), Expect = 4e-15
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 33/112 (29%)

Query: 10  YHCTA--CDASFCRKPYLEIHMRTHTGERPFQC--VVCLKRFSQKSALNTHKRMHIPYIQ 65
           Y C    C  +F +   L++H  +HT + P++C    C KRFS  S              
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPS-------------- 47

Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTH-KRIH 116
                          L+ H + H G    + + C+      +    H    H
Sbjct: 48  --------------RLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 61.5 bits (150), Expect = 1e-12
 Identities = 24/116 (20%), Positives = 32/116 (27%), Gaps = 39/116 (33%)

Query: 96  CEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVM 153
            E C K F + + L  H+  H     T+  PY C   GCD  FS    L           
Sbjct: 6   FENCGKAFKKHNQLKVHQFSH-----TQQLPYECPHEGCDKRFSLPSRL----------- 49

Query: 154 QPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTH-KRVH 208
                               + H + H G    +   CS      +    H    H
Sbjct: 50  --------------------KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 13/57 (22%), Positives = 18/57 (31%), Gaps = 2/57 (3%)

Query: 4  HSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKR 58
          H+   PY C    CD  F     L+ H + H G    +   C       +    H  
Sbjct: 26 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C+ C K FT+KS L+ H++ HTGER    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 4e-14
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
              + TGE+PY+C  C K F++KS L+ H++      HT ++    + 
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-----HTGERHSGPSS 45

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F  KS +  H+ SH G++  G +S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F++KS                             L +H ++
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKS----------------------------GLHIHQQS 34

Query: 88 HTGERPYQC 96
          HTGER    
Sbjct: 35 HTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C+ C  +F RK  L IH ++HTGER    
Sbjct: 5  SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 17/78 (21%), Positives = 24/78 (30%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C+ C  AF+RK  L                            
Sbjct: 2   SSGSSG-----TGEKPYKCSDCGKAFTRKSGL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +H ++HTGER    
Sbjct: 29  ---HIHQQSHTGERHSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.6 bits (174), Expect = 2e-16
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               +  GE+ ++C VC K F+Q S L TH+RVHTGE+P   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 8e-15
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
               +  GE+ Y+C+VC K FSQ S L TH+R+     HT +KP   +
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-----HTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +      GE+ Y CD+C K F+  S++ +H+  H G+KP G +S
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              +  GE+ ++C VC K FSQ S L TH+                            R
Sbjct: 2  SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ----------------------------R 33

Query: 87 THTGERPYQC 96
           HTGE+P   
Sbjct: 34 VHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
              G K Y C  C   F +  +L+ H R HTGE+P   
Sbjct: 5  SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 15/78 (19%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +            +K Y C  C   FS+  +L                            
Sbjct: 2   SSGSSG-----MGEKCYKCDVCGKEFSQSSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
              Q H R HTGE+P   
Sbjct: 29  ---QTHQRVHTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 70.2 bits (173), Expect = 3e-16
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + TGE+P++C  C K F  KS+L  H+R HTGE   + 
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 64.4 bits (158), Expect = 4e-14
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
               + TGE+PY+C  C K F+ KS+L  H+R      HT +     
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-----HTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + TGE+P++C  C K F+ KS                            NL VH R
Sbjct: 2  SSGSSGTGEKPYECNECQKAFNTKS----------------------------NLMVHQR 33

Query: 87 THTGERPYQC 96
          THTGE     
Sbjct: 34 THTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.6 bits (130), Expect = 3e-10
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
           +     TGE+PY C+ C K F  KS +  H+ +H G+     
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F  K  L +H RTHTGE     
Sbjct: 5  SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 18/78 (23%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF+ K  L                            
Sbjct: 2   SSGSSG-----TGEKPYECNECQKAFNTKSNL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH RTHTGE     
Sbjct: 29  ---MVHQRTHTGESGPSS 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 70.2 bits (173), Expect = 3e-16
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE PF C+ C K FT K++L  H+++HTGERP   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 2e-13
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE P+ C  C K F+ K++L  H++I     HT ++P   +
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKI-----HTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE P+ C  C K F  K+ +  H+  H G++P G +S
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS 45

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE PF C  C K F+ K+                            NL +H + 
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKT----------------------------NLIIHQKI 34

Query: 88 HTGERPYQC 96
          HTGERP   
Sbjct: 35 HTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G  P+ C+ C   F  K  L IH + HTGERP   
Sbjct: 5  SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 16/78 (20%), Positives = 23/78 (29%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T + P+ C+ C   F+ K                            T+L
Sbjct: 2   SSGSSG-----TGENPFICSECGKVFTHK----------------------------TNL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   + HTGERP   
Sbjct: 29  IIHQ---KIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+ PF C+ C   FT K+   +H + H
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 70.3 bits (173), Expect = 3e-16
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTH-KRVHTGERPYACDICDKRFA 224
              + +  +P+ C  C K F++   LN H K+VHT ERP+ C +     +
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 63.8 bits (156), Expect = 9e-14
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFS 137
              + +  +PY C+ C K FS+   LN H +     +HT ++P+ C    +  S
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQ----VHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 27/78 (34%)

Query: 28  HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
              + +  +P+ C  C K FS+   LN H +                           + 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIK---------------------------QV 35

Query: 88  HTGERPYQCEVCNKRFSQ 105
           HT ERP++C+V     S 
Sbjct: 36  HTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHM-RTHTGERPFQCVVCLKRFSQ 49
           S  KPY C +C   F R  +L  H+ + HT ERP +C V +   S 
Sbjct: 7  GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSH-RWSHVGDKPFGCTSCHLTFTS 253
           +     +  +PY C  C K F+   ++  H +  H  ++P  C       +S
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 44.5 bits (106), Expect = 6e-07
 Identities = 17/78 (21%), Positives = 23/78 (29%), Gaps = 32/78 (41%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHM-RT 179
            +  KPY C  C   FSR  +L                                 H+ + 
Sbjct: 7   GSVGKPYICQSCGKGFSRPDHL-------------------------------NGHIKQV 35

Query: 180 HTGERPFQCAVCSKRFTQ 197
           HT ERP +C V     + 
Sbjct: 36  HTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 14/50 (28%), Positives = 18/50 (36%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSF 280
           S   S    KP+ C SC   F+       H++  HT    H C V     
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 3e-16
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K +  K +L+ H++VHTGERP   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 3e-14
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+CE C K ++ K +L+ H+++     HT ++P   +
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-----HTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 28/70 (40%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + TGE+P++C  C K ++ K                             NL++H +
Sbjct: 2  SSGSSGTGEKPYKCEKCGKGYNSKF----------------------------NLDMHQK 33

Query: 87 THTGERPYQC 96
           HTGERP   
Sbjct: 34 VHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 1e-10
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K +  K  +  H+  H G++P G +S
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS 45

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   +  K  L++H + HTGERP   
Sbjct: 5  SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   ++ K                             +L
Sbjct: 2   SSGSSG-----TGEKPYKCEKCGKGYNSK----------------------------FNL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   + HTGERP   
Sbjct: 29  DMHQ---KVHTGERPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 69.9 bits (172), Expect = 4e-16
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +  GER  +C+ C K F Q S+   H+R+HTGE+P   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              +  GER ++C  C K F Q S+   H+RI     HT +KP   +
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRI-----HTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 16/44 (36%), Positives = 20/44 (45%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +      GER + C  C K F   S    HR  H G+KP G +S
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 17/69 (24%), Positives = 20/69 (28%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GER  +C  C K F Q S                            N   H R 
Sbjct: 3  SGSSGHGERGHRCSDCGKFFLQAS----------------------------NFIQHRRI 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
              G + + C+ C   F +      H R HTGE+P   
Sbjct: 5  SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G++   C+ C   F   S F  H R H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 4e-16
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GE+PF+C  C KRFTQ S L++H+RVHTGE+P   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 5e-14
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+P++CE C KRF+Q S L++H+R+     HT +KP   +
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-----HTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+P+ C+ C KRF   S + SH+  H G+KP G +S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+PF+C  C KRF+Q S L++H+                            R 
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSHQ----------------------------RV 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KP+ C  C   F +   L  H R HTGE+P   
Sbjct: 5  SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KP+ C  C   F++                             + L
Sbjct: 2   SSGSSG-----SGEKPFKCEECGKRFTQN----------------------------SQL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
            SHQ   R HTGE+P   
Sbjct: 29  HSHQ---RVHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 69.9 bits (172), Expect = 4e-16
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TG+RP++C  C K F  KSSL  H+R HTGE+P   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.1 bits (157), Expect = 6e-14
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TG+RPY+C  C K F  KSSL  H+R      HT +KP   +
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRS-----HTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TG+RP++C+ C K F  KS                            +L  H R+
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKS----------------------------SLICHRRS 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 19/43 (44%), Positives = 24/43 (55%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           +     TG+RPY C  C K F  KS +  HR SH G+KP G +
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G +PY C  C  +F  K  L  H R+HTGE+P   
Sbjct: 5  SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 16/78 (20%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  +PY C  C  AF  K  L                            
Sbjct: 2   SSGSSG-----TGQRPYECIECGKAFKTKSSL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R+HTGE+P   
Sbjct: 29  ---ICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G +P+ C  C   F +KS    H R+H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 5e-16
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
              + TGE+P+ C VC K F   + LN H RVHT E      
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 3e-14
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY C VC K F   + LN H R+     HT++     +
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-----HTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
                TGE+PY+C++C K F + +++  H   H  +   G +S
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P+ C VC K F   +                            +L  H+R 
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSA----------------------------HLNQHLRV 34

Query: 88 HTGERPYQCE 97
          HT E      
Sbjct: 35 HTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
              +G KPY C  C  +F    +L  H+R HT E     
Sbjct: 4  GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/77 (18%), Positives = 17/77 (22%), Gaps = 36/77 (46%)

Query: 112 HKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF 171
                     T +KPY C  C  AF    +L                             
Sbjct: 3   SGSSG-----TGEKPYSCNVCGKAFVLSAHL----------------------------- 28

Query: 172 SHQVHMRTHTGERPFQC 188
               H+R HT E     
Sbjct: 29  --NQHLRVHTQETLSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.4 bits (171), Expect = 5e-16
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGERP+ C VC K FT +S+L  H+++HTGE+P   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + TGERPY C VC K F+ +S+L  H++I     HT +KP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-----HTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGERP+ C VC K F+ +S                            NL  H + 
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRS----------------------------NLIKHQKI 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 3e-10
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGERPY C +C K F  +S +  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G +PY CT C  +F  +  L  H + HTGE+P   
Sbjct: 5  SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T ++PY CT C  AF+ +                            ++L
Sbjct: 2   SSGSSG-----TGERPYICTVCGKAFTDR----------------------------SNL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   + HTGE+P   
Sbjct: 29  IKHQ---KIHTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 5e-16
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C+ C K FT KS L  H++ HTGER    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 7e-14
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
              + TGE+PY+C  C K F+ KS L  H++      HT ++    + 
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-----HTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 4e-11
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F  KS +  H+  H G++  G +S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F+ KS                             L +H + 
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKS----------------------------RLRIHQKC 34

Query: 88 HTGERPYQC 96
          HTGER    
Sbjct: 35 HTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C+ C  SF  K  L IH + HTGER    
Sbjct: 5  SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C+ C  +F+ K  L                            
Sbjct: 2   SSGSSG-----TGEKPYKCSDCGKSFTWKSRL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
              ++H + HTGER    
Sbjct: 29  ---RIHQKCHTGERHSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 6e-16
 Identities = 18/42 (42%), Positives = 26/42 (61%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + +GE+P+ C  C K F+QKS L+ H+R HTGE+P   
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 3e-14
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
               + +GE+PY C  C K FSQKS L+ H+R      HT +KP   +
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRT-----HTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-11
 Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 28/71 (39%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + +GE+P+ C  C K FSQKS                             L  H R
Sbjct: 2  SSGSSGSGEKPYGCNECGKTFSQKS----------------------------ILSAHQR 33

Query: 87 THTGERPYQCE 97
          THTGE+P    
Sbjct: 34 THTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 16/43 (37%), Positives = 28/43 (65%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           +     +GE+PY C+ C K F+ KS +++H+ +H G+KP G +
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 18/37 (48%), Positives = 21/37 (56%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           SG KPY C  C  +F +K  L  H RTHTGE+P   
Sbjct: 7  GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 17/78 (21%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KPY C  C   FS+K  L                            
Sbjct: 2   SSGSSG-----SGEKPYGCNECGKTFSQKSIL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H RTHTGE+P   
Sbjct: 29  ---SAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KP+GC  C  TF+ KS  + H RTH
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 6e-16
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + TGE+P++C+ C K F +KS L+ H+R+HTGE P   
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
               + TGE+PY+C  C K F +KS L+ H+RI     HT + P   + 
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-----HTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F +KS                             L VH R 
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKS----------------------------QLHVHQRI 34

Query: 88 HTGERPYQC 96
          HTGE P   
Sbjct: 35 HTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F  KS +  H+  H G+ P G +S
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C+ C  SF +K  L +H R HTGE P   
Sbjct: 5  SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 17/78 (21%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C+ C  +F +K  L                            
Sbjct: 2   SSGSSG-----TGEKPYECSDCGKSFIKKSQL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH R HTGE P   
Sbjct: 29  ---HVHQRIHTGENPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.5 bits (171), Expect = 6e-16
 Identities = 16/42 (38%), Positives = 29/42 (69%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + TGE+P++C+VC K F+ + SL+ H+R+H+G++P   
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 4e-14
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
               + TGE+PY+C VC K FS + SL+ H+RI     H+  KP   +
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-----HSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 28/71 (39%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + TGE+P++C VC K FS +                             +L VH R
Sbjct: 2  SSGSSGTGEKPYECSVCGKAFSHRQ----------------------------SLSVHQR 33

Query: 87 THTGERPYQCE 97
           H+G++P    
Sbjct: 34 IHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
                TGE+PY C +C K F+ +  ++ H+  H G KP G +S
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C+ C  +F  +  L +H R H+G++P   
Sbjct: 5  SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 17/77 (22%), Positives = 23/77 (29%), Gaps = 36/77 (46%)

Query: 112 HKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF 171
                     T +KPY C+ C  AFS +Q L                             
Sbjct: 3   SGSSG-----TGEKPYECSVCGKAFSHRQSL----------------------------- 28

Query: 172 SHQVHMRTHTGERPFQC 188
              VH R H+G++P   
Sbjct: 29  --SVHQRIHSGKKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 69.1 bits (170), Expect = 6e-16
 Identities = 18/41 (43%), Positives = 28/41 (68%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+PF+C  C K F+++S+LN H ++HTGE+P   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 63.7 bits (156), Expect = 7e-14
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+P++C  C K FS++S+LN H ++     HT +KP   +
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKL-----HTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ C  C K F+ +S +  H   H G+KP G +S
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+PF+CV C K FS++SALN H                             + 
Sbjct: 3  SGSSGTGEKPFKCVECGKGFSRRSALNVHH----------------------------KL 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G KP+ C  C   F R+  L +H + HTGE+P   
Sbjct: 7  GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KP+ C  C   FSR+  L                            
Sbjct: 2   SSGSSG-----TGEKPFKCVECGKGFSRRSAL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH + HTGE+P   
Sbjct: 29  ---NVHHKLHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 6e-16
 Identities = 18/42 (42%), Positives = 30/42 (71%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + TGE+P++C++C K FT+KS L+ H+++HTGE+P   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 8e-14
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 5/48 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
               + TGE+PY+C +C K F++KS L+ H++I     HT +KP   +
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-----HTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 28/70 (40%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + TGE+P++C +C K F++KS                             L VH +
Sbjct: 2  SSGSSGTGEKPYECSICGKSFTKKS----------------------------QLHVHQQ 33

Query: 87 THTGERPYQC 96
           HTGE+P   
Sbjct: 34 IHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 19/44 (43%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C IC K F  KS +  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G KPY C+ C  SF +K  L +H + HTGE+P   
Sbjct: 7  GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C+ C  +F++K  L                            
Sbjct: 2   SSGSSG-----TGEKPYECSICGKSFTKKSQL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH + HTGE+P   
Sbjct: 29  ---HVHQQIHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 7e-16
 Identities = 12/41 (29%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + + E+P++C  C K + ++ +L+ H+RVH GE+    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + + E+PY+CE C K ++++ +L+ H+R+     H  +K    +
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-----HMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     + E+PY C+ C K +  +  +  H+  H+G+K  G +S
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + + E+P++C  C K ++++                             NL++H R 
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRL----------------------------NLDMHQRV 34

Query: 88 HTGERPYQC 96
          H GE+    
Sbjct: 35 HMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             S  KPY C  C   + R+  L++H R H GE+    
Sbjct: 5  SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 12/78 (15%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KPY C  C   ++R+  L                            
Sbjct: 2   SSGSSG-----SVEKPYKCEDCGKGYNRRLNL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +H R H GE+    
Sbjct: 29  ---DMHQRVHMGEKTSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 8e-16
 Identities = 19/41 (46%), Positives = 29/41 (70%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++CA C K FT +S+L TH+++HTGE+P   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + TGE+PY+C  C K F+ +S+L TH++I     HT +KP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-----HTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F  +S + +H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F+ +S                            NL  H + 
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRS----------------------------NLFTHQKI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F  +  L  H + HTGE+P   
Sbjct: 5  SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF+ +                            ++L
Sbjct: 2   SSGSSG-----TGEKPYRCAECGKAFTDR----------------------------SNL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
           F+HQ   + HTGE+P   
Sbjct: 29  FTHQ---KIHTGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 69.1 bits (170), Expect = 8e-16
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +  GE+ ++C  C   F+Q SSL  H+ VH GE+P   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              +  GE+ ++C  C+  FSQ SSL  H+ +     H  +KP   +
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV-----HVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +      GE+ + C  CD  F+  S +  H+  HVG+KP G +S
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
            G K + C  CD  F +   L +H   H GE+P   
Sbjct: 7  GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GE+ ++C  C   FSQ S                            +L +H   
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQAS----------------------------SLRLHQNV 34

Query: 88 HTGERPYQC 96
          H GE+P   
Sbjct: 35 HVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 12/68 (17%), Positives = 18/68 (26%), Gaps = 31/68 (45%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
              +K + C  CD  FS+   L                               ++H   H
Sbjct: 7   GMGEKTWKCRECDMCFSQASSL-------------------------------RLHQNVH 35

Query: 181 TGERPFQC 188
            GE+P   
Sbjct: 36  VGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S +G+K + C  C + F+  S   +H   H
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.0 bits (170), Expect = 9e-16
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+PF+C+ C K F  KS+L  H+R HTGE+P   
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+P++C  C K F+ KS+L  H+R      HT +KP   +
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-----HTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+PF+C  C K F+ KS                            NL VH RT
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKS----------------------------NLIVHQRT 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ C  C K F  KS +  H+ +H G+KP G +S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KP+ C+ C  +F  K  L +H RTHTGE+P   
Sbjct: 5  SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 18/78 (23%), Positives = 24/78 (30%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KP+ C+ C  AF+ K  L                            
Sbjct: 2   SSGSSG-----TGEKPFECSECQKAFNTKSNL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH RTHTGE+P   
Sbjct: 29  ---IVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 8e-04
 Identities = 16/34 (47%), Positives = 19/34 (55%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KPF C+ C   F +KS   VH RTH
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 9e-16
 Identities = 14/42 (33%), Positives = 25/42 (59%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
              + +GE+P++C  C K + ++  L+ H+RVHTGE+     
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+PY+C  C K + ++  L+ H+R+     HT +K    +
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV-----HTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+PY C  C K +  +  +  H+  H G+K  G +S
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+P++CV C K + ++                             +L+ H R 
Sbjct: 3  SGSSGSGEKPYKCVECGKGYKRRL----------------------------DLDFHQRV 34

Query: 88 HTGERPYQC 96
          HTGE+    
Sbjct: 35 HTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KPY C  C   + R+  L+ H R HTGE+    
Sbjct: 5  SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 13/78 (16%), Positives = 19/78 (24%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KPY C  C   + R+  L                            
Sbjct: 2   SSGSSG-----SGEKPYKCVECGKGYKRRLDL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+    
Sbjct: 29  ---DFHQRVHTGEKLSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 9e-16
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+PF C  C K F+    LN H+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+P+ C  C K FS    LN H+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-----HTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ C  C K F+    +  HR  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+PF C+ C K FS    LN H+                            R 
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR----------------------------RI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KP+ C  C  +F     L  H R HTGE+P   
Sbjct: 5  SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 16/78 (20%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KP+ C  C  AFS    L                            
Sbjct: 2   SSGSSG-----TGEKPFDCIDCGKAFSDHIGL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---NQHRRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGER ++C+ C K F +KS+L  H+R+HTGE+P   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 7e-14
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGER Y+C  C K F++KS+L  H+RI     HT +KP   +
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRI-----HTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 19/44 (43%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGER Y C  C K FA KS +  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGER ++C  C K F++KS                             L +H R 
Sbjct: 3  SGSSGTGERHYECSECGKAFARKS----------------------------TLIMHQRI 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G + Y C+ C  +F RK  L +H R HTGE+P   
Sbjct: 5  SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 16/78 (20%), Positives = 23/78 (29%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T ++ Y C+ C  AF+RK  L                            
Sbjct: 2   SSGSSG-----TGERHYECSECGKAFARKSTL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +H R HTGE+P   
Sbjct: 29  ---IMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G++ + C+ C   F  KS   +H R H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 22/41 (53%), Positives = 29/41 (70%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GE+PFQC  C KRFTQ S L++H+RVHTGE+P   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 2e-13
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+P+QCE C KRF+Q S L++H+R+     HT +KP   +
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-----HTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+P+ C+ C KRF   S++ SH+  H G+KP G +S
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+PFQC  C KRF+Q S L++H+R                             
Sbjct: 3  SGSSGSGEKPFQCEECGKRFTQNSHLHSHQR----------------------------V 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KP+ C  C   F +  +L  H R HTGE+P   
Sbjct: 5  SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KP+ C  C   F++  +L                            
Sbjct: 2   SSGSSG-----SGEKPFQCEECGKRFTQNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---HSHQRVHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 1e-15
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +  G++ F+C  C K FTQ SSL  H+R+HTGE+P   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              +  G++ ++C  C K F+Q SSL  H+RI     HT +KP   +
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI-----HTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +      G++ + C+ C K F   S +T H+  H G+KP G +S
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  G++ F+C  C K F+Q S                            +L VH R 
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSS----------------------------SLTVHQRI 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G K + C  C  +F +   L +H R HTGE+P   
Sbjct: 5  SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 13/78 (16%), Positives = 18/78 (23%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +             K + C  C   F++   L                            
Sbjct: 2   SSGSSG-----AGKKLFKCNECKKTFTQSSSL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH R HTGE+P   
Sbjct: 29  ---TVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 15/34 (44%), Positives = 15/34 (44%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G K F C  C  TFT  S   VH R H
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F  +  L TH  VHTGE+P   
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.1 bits (157), Expect = 5e-14
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+CE C K F  +  L TH  +     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-----HTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 6e-11
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F  +  + +H   H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F  +  L TH                               
Sbjct: 3  SGSSGTGEKPYKCEECGKGFICRRDLYTHH----------------------------MV 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F  +  L  H   HTGE+P   
Sbjct: 5  SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/78 (17%), Positives = 19/78 (24%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   F  ++ L                            
Sbjct: 2   SSGSSG-----TGEKPYKCEECGKGFICRRDL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HTGE+P   
Sbjct: 29  ---YTHHMVHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F QK++L  H+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F+QK++L  H+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-----HTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K FA K+ +T H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F+QK+                            NL  H R 
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKA----------------------------NLTQHQRI 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F +K  L  H R HTGE+P   
Sbjct: 5  SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 18/78 (23%), Positives = 24/78 (30%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF++K                             +L
Sbjct: 2   SSGSSG-----TGEKPYRCGECGKAFAQK----------------------------ANL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   R HTGE+P   
Sbjct: 29  TQHQ---RIHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +  GE+P+ C+ C K F+ KS L  H R H+GE+P   
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 7e-14
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              +  GE+PY C  C K FS KS L  H R      H+ +KP   +
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-----HSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +      GE+PY C  C K F+ KSY+  H  +H G+KP G +S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-11
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GE+P+ C  C K FS KS                             L +HMRT
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKS----------------------------YLIIHMRT 34

Query: 88 HTGERPYQCE 97
          H+GE+P    
Sbjct: 35 HSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 1e-10
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C+ C  +F  K YL IHMRTH+GE+P   
Sbjct: 5  SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 19/78 (24%), Positives = 25/78 (32%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +            +KPY C+ C  AFS K YL                            
Sbjct: 2   SSGSSG-----AGEKPYGCSECGKAFSSKSYL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +HMRTH+GE+P   
Sbjct: 29  ---IIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KP+GC+ C   F+SKS   +H+RTH
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C VC K F   SSL  H+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 3e-14
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C+VC+K F   SSL  H+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI-----HTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY CD+C K F   S +T H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C VC K F   S                            +L VH R 
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGS----------------------------SLTVHQRI 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  SF     L +H R HTGE+P   
Sbjct: 5  SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 16/78 (20%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  +F     L                            
Sbjct: 2   SSGSSG-----TGEKPYKCDVCHKSFRYGSSL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH R HTGE+P   
Sbjct: 29  ---TVHQRIHTGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + TGE P++C  C K F++K  L +H+R H GE+P   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
               + TGE PY+C  C K FS+K  L +H+R      H  +KP   +
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRT-----HAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE P++C  C K FS+K                              L  H RT
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKY----------------------------QLISHQRT 34

Query: 88 HTGERPYQC 96
          H GE+P   
Sbjct: 35 HAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE PY C  C K F+ K  + SH+ +H G+KP G +S
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G  PY C  C  +F RK  L  H RTH GE+P   
Sbjct: 5  SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 20/78 (25%), Positives = 23/78 (29%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T + PY C  C  AFSRK                              L
Sbjct: 2   SSGSSG-----TGENPYECHECGKAFSRK----------------------------YQL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
            SHQ   RTH GE+P   
Sbjct: 29  ISHQ---RTHAGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +  GE+P+QC+ C K F+    L  H   HT E+P   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              +  GE+PYQC  C K FS    L  H        HT +KP   +
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT-----HTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +      GE+PY C  C K F+    +T H  +H  +KP G +S
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS 45

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 16/69 (23%), Positives = 20/69 (28%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GE+P+QC  C K FS    L  H                              T
Sbjct: 3  SGSSGEGEKPYQCSECGKSFSGSYRLTQHW----------------------------IT 34

Query: 88 HTGERPYQC 96
          HT E+P   
Sbjct: 35 HTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
            G KPY C+ C  SF     L  H  THT E+P   
Sbjct: 7  GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KP+ C+ C  +F+   +   H  TH
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 20/41 (48%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+PF+CA C K F+  S L TH+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+P++C  C K FS  S L TH+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRI-----HTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ C  C K F++ S + +H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+PF+C  C K FS  S                             L  H R 
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISS----------------------------QLATHQRI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KP+ C  C  SF     L  H R HTGE+P   
Sbjct: 5  SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 15/78 (19%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KP+ C  C  +FS    L                            
Sbjct: 2   SSGSSG-----TGEKPFECAECGKSFSISSQL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---ATHQRIHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGER ++C+ C K F QKS+L+ H+R+H GE+P   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGER Y+C  C K F QKS+L+ H+RI     H  +KP   +
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRI-----HRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGER Y C  C K F  KS ++ H+  H G+KP G +S
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGER ++C  C K F QKS                             L +H R 
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKS----------------------------TLSMHQRI 34

Query: 88 HTGERPYQC 96
          H GE+P   
Sbjct: 35 HRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G + Y C+ C  +F +K  L +H R H GE+P   
Sbjct: 5  SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 14/78 (17%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T ++ Y C+ C  AF +K  L                            
Sbjct: 2   SSGSSG-----TGERHYECSECGKAFIQKSTL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +H R H GE+P   
Sbjct: 29  ---SMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G++ + C+ C   F  KS  ++H R H
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 18/42 (42%), Positives = 27/42 (64%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + TGE+P++C VC K F+  +SL  H+RVH+GE+P   
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 5e-14
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
               + TGE+PY+C+VC K FS  +SL  H+R+     H+ +KP   +
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-----HSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY CD+C K F+  + +T H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 28/71 (39%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + TGE+P++C VC K FS  ++L  H+                            R
Sbjct: 2  SSGSSGTGEKPYECDVCRKAFSHHASLTQHQ----------------------------R 33

Query: 87 THTGERPYQCE 97
           H+GE+P    
Sbjct: 34 VHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 1e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F     L  H R H+GE+P   
Sbjct: 5  SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 16/78 (20%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AFS    L                            
Sbjct: 2   SSGSSG-----TGEKPYECDVCRKAFSHHASL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R H+GE+P   
Sbjct: 29  ---TQHQRVHSGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 20/41 (48%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P+ C  C K F QKS LN H+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 8e-14
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY C  C K F QKS LN H+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-----HTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F  KS++  HR  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P+ C  C K F QKS LN H+                            R 
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHR----------------------------RI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  SF +K +L  H R HTGE+P   
Sbjct: 5  SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  +F +K +L                            
Sbjct: 2   SSGSSG-----TGEKPYICNECGKSFIQKSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---NRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KP+ C  C  +F  KS    H R H
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.0 bits (167), Expect = 2e-15
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +G++P++C  C K F Q   LN HKRVHTGER    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + +G++PY+C+ C K F Q   LN HKR+     HT ++    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-----HTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +G++P++C  C K F Q   LN HK                            R 
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHK----------------------------RV 34

Query: 88 HTGERPYQCE 97
          HTGER     
Sbjct: 35 HTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 16/37 (43%), Positives = 19/37 (51%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           SG KPY C  C  +F +  +L  H R HTGER    
Sbjct: 7  GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +G++PY C  C K F    ++  H+  H G++  G +S
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 13/34 (38%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G KP+ C  C  TF        H R H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P+ CA C K FT +S+L  H+++HT ++P   
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY C  C K F+ +S+L  H++I     HT+ KP   +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKI-----HTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F ++S +  H+  H   KP G +S
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P+ C  C K F+ +S                            NL  H + 
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRS----------------------------NLIKHQKI 34

Query: 88 HTGERPYQCE 97
          HT ++P    
Sbjct: 35 HTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F  +  L  H + HT ++P   
Sbjct: 5  SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF+ +                            ++L
Sbjct: 2   SSGSSG-----TGEKPYICAECGKAFTIR----------------------------SNL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   + HT ++P   
Sbjct: 29  IKHQ---KIHTKQKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TG + F+C  C K FT+KS+L+ H+++HTGE+P   
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TG + ++C  C K F++KS+L+ H++I     HT +KP   +
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-----HTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TG + + C  C K F  KS ++ H+  H G+KP G +S
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TG + F+C  C K F++KS                             L +H + 
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKS----------------------------TLSMHQKI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G K + CT C  +F RK  L +H + HTGE+P   
Sbjct: 5  SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  K + CT C  AF+RK  L                            
Sbjct: 2   SSGSSG-----TGGKHFECTECGKAFTRKSTL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +H + HTGE+P   
Sbjct: 29  ---SMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G K F CT C   FT KS  ++H + H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 8  KPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTH-KRMH 60
          + + C  C  +F R+ +L+ H R+HT E+P+ C +C + F+++  L  H +++H
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 18/49 (36%), Positives = 28/49 (57%)

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH 232
           R F C VC++ F ++  L  H R HT E+PY C +C++ F  +  +  H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 67.1 bits (165), Expect = 5e-15
 Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTH-KRIH 116
           + C+ C   F  +++L+ H R+HT E+PY C +CN+ F+++  L  H ++IH
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 64.0 bits (157), Expect = 8e-14
 Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 32/88 (36%)

Query: 125 KPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGER 184
           + + C  C  AF+R+++L                               + H R+HT E+
Sbjct: 1   RSFVCEVCTRAFARQEHL-------------------------------KRHYRSHTNEK 29

Query: 185 PFQCAVCSKRFTQKSSLNTH-KRVHTGE 211
           P+ C +C++ FT++  L  H +++H+G 
Sbjct: 30  PYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 58.3 bits (142), Expect = 8e-12
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 92  RPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYL 142
           R + CEVC + F+++  L  H R      HT +KPY C  C+ AF+R+  L
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRS-----HTNEKPYPCGLCNRAFTRRDLL 46

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT 266
           R + C++C + FA + ++  H  SH  +KP+ C  C+  FT +     H +  H+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHM-RTHTGE 35
          H+  KPY C  C+ +F R+  L  H  + H+G 
Sbjct: 25 HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TG +P+ C+ C+K F+ KS L  H+R HTG +P   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TG +PY C  C K FS KS L  H+R      HT  KP   +
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-----HTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TG +PY C  C K F++KS +  H+ SH G KP G +S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 54.8 bits (133), Expect = 1e-10
 Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TG +P+ C  C K FS KS                             L VH R+
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKS----------------------------QLIVHQRS 34

Query: 88 HTGERPYQC 96
          HTG +P   
Sbjct: 35 HTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C+ C  +F  K  L +H R+HTG +P   
Sbjct: 5  SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G KP+GC+ C  TF+ KSQ  VH R+H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 17/78 (21%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  KPY C+ C   FS K  L                            
Sbjct: 2   SSGSSG-----TGVKPYGCSQCAKTFSLKSQL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH R+HTG +P   
Sbjct: 29  ---IVHQRSHTGVKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 67.6 bits (166), Expect = 2e-15
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
              +  GE+P++C  C K F+QK SL  H RVHTG  P +
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.0 bits (149), Expect = 5e-13
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
              +  GE+PY+C+ C K FSQK SL  H R+     HT   P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV-----HTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 28/67 (41%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GE+P++C  C K FSQK                             +L VH+R 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKG----------------------------SLIVHIRV 33

Query: 88 HTGERPY 94
          HTG  P 
Sbjct: 34 HTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.5 bits (119), Expect = 9e-09
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
                 GE+PY CD C K F+ K  +  H   H G  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPF 38
              G KPY C  C  +F +K  L +H+R HTG  P 
Sbjct: 4  GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
              S  G+KP+ C  C   F+ K    VH+R H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 17/75 (22%), Positives = 20/75 (26%), Gaps = 36/75 (48%)

Query: 112 HKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF 171
                       +KPY C  C  AFS+K  L                             
Sbjct: 2   SSGSS-----GGEKPYRCDQCGKAFSQKGSL----------------------------- 27

Query: 172 SHQVHMRTHTGERPF 186
              VH+R HTG  P 
Sbjct: 28  --IVHIRVHTGSGPS 40

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 20/41 (48%), Positives = 28/41 (68%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C VCSK FTQK+ L  H++ HTGE+P   
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C+VC+K F+QK+ L  H++      HT +KP   +
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-----HTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C VC K F+QK+                            +L  H +T
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKA----------------------------HLAQHQKT 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 16/43 (37%), Positives = 26/43 (60%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           +     TGE+PY C +C K F  K+++  H+ +H G+KP G +
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G KPY C  C  +F +K +L  H +THTGE+P   
Sbjct: 7  GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 17/78 (21%), Positives = 24/78 (30%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF++K +L                            
Sbjct: 2   SSGSSG-----TGEKPYECKVCSKAFTQKAHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H +THTGE+P   
Sbjct: 29  ---AQHQKTHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 68.0 bits (167), Expect = 2e-15
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TG++PF+C  C K F  K +L TH+R+HTGE+    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 63.7 bits (156), Expect = 6e-14
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
              + TG++P++C  C K F  K +L TH+RI     HT +K    +G
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-----HTGEKSGPSSG 45

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + TG++PF+C  C K F  K                             NL  H R
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKG----------------------------NLVTHQR 33

Query: 87 THTGERPYQC 96
           HTGE+    
Sbjct: 34 IHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           +     TG++P+ C  C K F  K  + +H+  H G+K    +
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KP+ CT C  SF  K  L  H R HTGE+    
Sbjct: 5  SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 15/78 (19%), Positives = 19/78 (24%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  KP+ CT C  +F  K  L                            
Sbjct: 2   SSGSSG-----TGQKPFECTHCGKSFRAKGNL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+    
Sbjct: 29  ---VTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G KPF CT C  +F +K     H R H
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 2e-15
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TG +P+ C  C K F+  SSL TH+ +HTGE+P   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 7e-14
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + TG +PY C  C K FS  SSL TH+ I     HT +KP   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-----HTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 18/44 (40%), Positives = 27/44 (61%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TG +PY C+ C K F+V S +T+H+  H G+KP G +S
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TG +P+ C  C K FS  S+L TH+                              
Sbjct: 3  SGSSGTGVKPYMCNECGKAFSVYSSLTTHQ----------------------------VI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 6e-08
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F     L  H   HTGE+P   
Sbjct: 5  SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 18/78 (23%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  KPY C  C  AFS                              +SL
Sbjct: 2   SSGSSG-----TGVKPYMCNECGKAFSVY----------------------------SSL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
            +HQ     HTGE+P   
Sbjct: 29  TTHQ---VIHTGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+ + C  C K F++   L  H+R+H+GE+P   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 6e-14
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+ Y C+ C K FS+   L  H+R+     H+ +KP   +
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-----HSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+ Y C  C K F+    +  H   H G+KP G +S
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+ + C  C K FS+   L  H+                            R 
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKHE----------------------------RL 34

Query: 88 HTGERPYQC 96
          H+GE+P   
Sbjct: 35 HSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G K Y+C  C  SF R P L  H R H+GE+P   
Sbjct: 5  SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 8e-05
 Identities = 15/78 (19%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +K Y+C  C  +FSR                               L
Sbjct: 2   SSGSSG-----TGEKLYNCKECGKSFSRA----------------------------PCL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             H+   R H+GE+P   
Sbjct: 29  LKHE---RLHSGEKPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
              + TGE+PFQC  C   F+   SL  H R H    P    
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + TGE+P+QC+ C   FS   SL  H R      H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS-----HERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 7e-10
 Identities = 15/69 (21%), Positives = 20/69 (28%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+PFQC  C   FS                               +L  H+R+
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSC----------------------------SLFKHLRS 34

Query: 88 HTGERPYQC 96
          H    P   
Sbjct: 35 HERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ C  C   F+    +  H  SH    P G +S
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G KP+ C  C  +F     L  H+R+H    P   
Sbjct: 7  GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KPF C  C + F+       HLR+H
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +  G  P++C+ C K F+ K  L  H+R+HT E+P   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              +  G  PY+C  C K FS K  L  H+R+     HT +KP   +
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM-----HTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +      G  PY C  C+K F+ K  +  H+  H  +KP G +S
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G  PY C+ C+ SF  K  L +H R HT E+P   
Sbjct: 7  GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 9e-10
 Identities = 16/69 (23%), Positives = 20/69 (28%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  G  P++C  C K FS K                              L VH R 
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKL----------------------------RLLVHQRM 34

Query: 88 HTGERPYQC 96
          HT E+P   
Sbjct: 35 HTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G  P+ C+ C  +F+ K +  VH R H
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 15/68 (22%), Positives = 19/68 (27%), Gaps = 31/68 (45%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
                PY C+ C+ +FS K  L                                VH R H
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRL-------------------------------LVHQRMH 35

Query: 181 TGERPFQC 188
           T E+P   
Sbjct: 36  TREKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +  +  QC  C + FT KS LN H+R+HTGE+P   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +  + +QC  C + F+ KS LN H+RI     HT +KP   +
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-----HTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.6 bits (127), Expect = 8e-10
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +  + + C  C + F +KS++  H+  H G+KP G +S
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
             + +  +  QC  C + F+ KS LN H+R+H
Sbjct: 3  SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           S  K + C  C   F  K +L  H R HTGE+P   
Sbjct: 7  GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 12/34 (35%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S    K   C  C   FT KS    H R H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P+ C  C K F   S L  H+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 7e-14
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY CE C K F   S L  H+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-----HTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F   S +  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P+ C  C K F   S L  H+                            R 
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQ----------------------------RI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY+C  C  +F     L+ H R HTGE+P   
Sbjct: 5  SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 17/78 (21%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY+C  C  AF     L                            
Sbjct: 2   SSGSSG-----TGEKPYNCEECGKAFIHDSQL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
              Q H R HTGE+P   
Sbjct: 29  ---QEHQRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 3e-15
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GE+P++C  C K FTQ S L  H R+HTGE+P   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 9e-14
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+PY+C  C K F+Q S L  H RI     HT +KP   +
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-----HTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+PY C+ C K F   S++T+H   H G+KP G +S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+P++C  C K F+Q S L  H R                             
Sbjct: 3  SGSSGSGEKPYKCNECGKVFTQNSHLTNHWR----------------------------I 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KPY C  C   F +  +L  H R HTGE+P   
Sbjct: 5  SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/78 (17%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KPY C  C   F++  +L                            
Sbjct: 2   SSGSSG-----SGEKPYKCNECGKVFTQNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---TNHWRIHTGEKPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 67.5 bits (166), Expect = 3e-15
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TG +P+ C  C K F  KS L  H R HTGE   + 
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.3 bits (150), Expect = 5e-13
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + TG +PY C  C K F  KS L  H R      HT +     
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-----HTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 17/69 (24%), Positives = 21/69 (30%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TG +P+ C  C K F  KS                             L +H RT
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKS----------------------------YLIIHTRT 34

Query: 88 HTGERPYQC 96
          HTGE     
Sbjct: 35 HTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 18/37 (48%), Positives = 20/37 (54%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G KPY C  C  +F  K YL IH RTHTGE     
Sbjct: 7  GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
           +     TG +PY C+ C K F  KSY+  H  +H G+     
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 18/78 (23%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  KPY C  C  AF  K YL                            
Sbjct: 2   SSGSSG-----TGMKPYVCNECGKAFRSKSYL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +H RTHTGE     
Sbjct: 29  ---IIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G KP+ C  C   F SKS   +H RTH
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
              + +GE+PF+C  C K F   S   +H+R H+GE+P    
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+P++CE C K F   S   +H+R      H+ +KP   +
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-----HSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 1e-10
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+P+ C+ C K F   S   SH+ SH G+KP G +S
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS 45

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+PF+C  C K F   S                                H R+
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNS----------------------------QCYSHQRS 34

Query: 88 HTGERPYQCE 97
          H+GE+P    
Sbjct: 35 HSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 6e-09
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KP+ C  C   F        H R+H+GE+P   
Sbjct: 5  SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KP+ C  C   F                               +  
Sbjct: 2   SSGSSG-----SGEKPFKCEECGKGFYTN----------------------------SQC 28

Query: 171 FSHQVHMRTHTGERPFQC 188
           +SHQ   R+H+GE+P   
Sbjct: 29  YSHQ---RSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KPF C  C   F + SQ   H R+H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.6 bits (166), Expect = 3e-15
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F+ +SSL TH+ +HTG++P   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K FS +SSL TH+ I     HT  KP   +
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-----HTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F+V+S +T+H+  H G KP G +S
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K FS +S+L TH+                              
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ----------------------------AI 34

Query: 88 HTGERPYQCE 97
          HTG++P    
Sbjct: 35 HTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F  +  L  H   HTG++P   
Sbjct: 5  SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 15/78 (19%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AFS +  L                            
Sbjct: 2   SSGSSG-----TGEKPYECNQCGKAFSVRSSL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HTG++P   
Sbjct: 29  ---TTHQAIHTGKKPSGP 43

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 68.1 bits (167), Expect = 3e-15
 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 172 SHQVHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYV 229
            + +        RP+ C V  C +RF++   L  H R+HTG++P+ C IC + F+   ++
Sbjct: 6   MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65

Query: 230 TSHRWSH 236
           T+H  +H
Sbjct: 66  TTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 65.0 bits (159), Expect = 4e-14
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 2  KLHSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRM 59
           +    +PY C   +CD  F R   L  H+R HTG++PFQC +C++ FS+   L TH R 
Sbjct: 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

Query: 60 H 60
          H
Sbjct: 72 H 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 63.5 bits (155), Expect = 2e-13
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 30/91 (32%)

Query: 28  HMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHM 85
                   RP+ C V  C +RFS+   L  H                            +
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRH----------------------------I 41

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
           R HTG++P+QC +C + FS+   L TH R H
Sbjct: 42  RIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 27/110 (24%), Positives = 38/110 (34%), Gaps = 40/110 (36%)

Query: 102 RFSQKSSLNTHKRIHINYLHTEDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGN 159
                ++L  +            +PY C    CD  FSR   L                 
Sbjct: 2   EPHPMNNLLNYVVPK-------MRPYACPVESCDRRFSRSDEL----------------- 37

Query: 160 NTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHT 209
                           H+R HTG++PFQC +C + F++   L TH R HT
Sbjct: 38  --------------TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 80  NLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFS 137
           NL  ++      RPY C  E C++RFS+   L  H RIH     T  KP+ C  C   FS
Sbjct: 8   NLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIH-----TGQKPFQCRICMRNFS 60

Query: 138 RKQYL 142
           R  +L
Sbjct: 61  RSDHL 65

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.6 bits (132), Expect = 3e-10
 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 198 KSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKS 255
               N    V    RPYAC +  CD+RF+    +T H   H G KPF C  C   F+   
Sbjct: 4   HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63

Query: 256 QFAVHLRTH 264
               H+RTH
Sbjct: 64  HLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHT 33
          +++H+G KP+ C  C  +F R  +L  H+RTHT
Sbjct: 41 IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 3e-15
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P +C  C K F  KS L  H+R H  ++    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.7 bits (148), Expect = 1e-12
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+P +C  C K F  KS L  H+R      H +DK    +
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT-----HVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 17/44 (38%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P  C  C K F  KS +  H+ +HV DK  G +S
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 3e-10
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G KP  CT C  +FC K  L +H RTH  ++    
Sbjct: 7  GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P +C  C K F  KS                             L +H RT
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKS----------------------------QLIMHQRT 34

Query: 88 HTGERPYQC 96
          H  ++    
Sbjct: 35 HVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KP  CT C   F  KSQ  +H RTH
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 9e-05
 Identities = 14/68 (20%), Positives = 18/68 (26%), Gaps = 31/68 (45%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            T +KP  CT C  AF  K  L                                +H RTH
Sbjct: 7   GTGEKPCKCTECGKAFCWKSQL-------------------------------IMHQRTH 35

Query: 181 TGERPFQC 188
             ++    
Sbjct: 36  VDDKHSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 4e-15
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F  +SSL  H+  H+GE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F  +SSL  H+       H+ +KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-----HSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F  +S +  H+ +H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F  +S                            +L +H  T
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARS----------------------------SLAIHQAT 34

Query: 88 HTGERPYQC 96
          H+GE+P   
Sbjct: 35 HSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F  +  L IH  TH+GE+P   
Sbjct: 5  SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 15/78 (19%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF  +  L                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKAFRARSSL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               +H  TH+GE+P   
Sbjct: 29  ---AIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KP+ C  C   F ++S  A+H  TH
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.1 bits (165), Expect = 4e-15
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGERP +C  C K F Q + L  H+R+HTGE+P   
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 3e-13
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGERP++C  C K F Q + L  H+RI     HT +KP   +
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-----HTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGERP+ C+ C K F   +++  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGERP +C  C K F Q +                            +L  H R 
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSA----------------------------HLIQHQRI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G +P+ C  C  SF +  +L  H R HTGE+P   
Sbjct: 5  SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T ++P+ C  C  +F +  +L                            
Sbjct: 2   SSGSSG-----TGERPHKCNECGKSFIQSAHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---IQHQRIHTGEKPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.1 bits (165), Expect = 4e-15
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GE+P++C+ C K F + + LN H+R+HTG RP   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 9e-14
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+PY+C  C K F + + LN H+RI     HT  +P   +
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-----HTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+PY C  C K F   +++  HR  H G +P G +S
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+P++C  C K F + + LN H+R                             
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRR----------------------------I 34

Query: 88 HTGERPYQCE 97
          HTG RP    
Sbjct: 35 HTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KPY C+ C  +F R  +L  H R HTG RP   
Sbjct: 5  SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 16/78 (20%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KPY C+ C  AF R  +L                            
Sbjct: 2   SSGSSG-----SGEKPYKCSECGKAFHRHTHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTG RP   
Sbjct: 29  ---NEHRRIHTGYRPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 4e-15
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GE+P+ C  C K F   + L  H+R+HTGE+P   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 9e-14
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+PY C+ C K F   + L  H+RI     HT +KP   +
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-----HTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+PY CD C K F + + +  H+  H G+KP G +S
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+P+ C  C K F   + L  H+                            R 
Sbjct: 3  SGSSGSGEKPYVCDYCGKAFGLSAELVRHQ----------------------------RI 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KPY C  C  +F     L  H R HTGE+P   
Sbjct: 5  SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 16/78 (20%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KPY C  C  AF                                 L
Sbjct: 2   SSGSSG-----SGEKPYVCDYCGKAFGLS----------------------------AEL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   R HTGE+P   
Sbjct: 29  VRHQ---RIHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 67.2 bits (165), Expect = 4e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P+ C  C K F   S L  H+RVH+GE+P   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 63.0 bits (154), Expect = 1e-13
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY C+ C K F   S L  H+R+     H+ +KP   +
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-----HSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 53.0 bits (128), Expect = 5e-10
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT 245
           +     TGE+PY C  C K F   S +  H+  H G+KP G +
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P+ C  C K F   S L  H+                            R 
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQ----------------------------RV 34

Query: 88 HTGERPYQCE 97
          H+GE+P    
Sbjct: 35 HSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.1 bits (118), Expect = 1e-08
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY+C  C  SF     L  H R H+GE+P   
Sbjct: 5  SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 15/78 (19%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY+C  C  +F                               + L
Sbjct: 2   SSGSSG-----TGEKPYNCKECGKSFRWA----------------------------SCL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   R H+GE+P   
Sbjct: 29  LKHQ---RVHSGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 4e-15
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F   S+L TH+ +HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 8e-14
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F   S+L TH+ I     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-----HTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-10
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F   S +T+H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F   S L TH+                              
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ----------------------------VI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 4e-08
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F     L  H   HTGE+P   
Sbjct: 5  SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 15/78 (19%), Positives = 18/78 (23%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF     L                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKAFRAHSNL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HTGE+P   
Sbjct: 29  ---TTHQVIHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 5e-15
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+PF+C  C K + Q+  L  H+RVHTGE+P   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+P++C  C K ++Q+  L  H+R+     HT +KP   +
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-----HTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ C  C K +  + ++T H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+PF+C  C K ++Q+                             +L  H R 
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRV----------------------------HLTQHQRV 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KP+ C  C  S+ ++ +L  H R HTGE+P   
Sbjct: 5  SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KP+ C  C  +++++ +L                            
Sbjct: 2   SSGSSG-----TGEKPFKCGECGKSYNQRVHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---TQHQRVHTGEKPSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 5e-15
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GERPF+C  C K F ++S L  H R+H+ E+    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 8e-13
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GERP++C  C K F ++S L  H R+     H+ +K    +
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-----HSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GERP+ C+ C K F  +S++  H   H  +K  G +S
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           SG +P+ C  C   F R+ +L  H+R H+ E+    
Sbjct: 7  GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GERPF+C  C K F ++S                            +L  H+R 
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRS----------------------------HLAGHLRL 34

Query: 88 HTGERPYQC 96
          H+ E+    
Sbjct: 35 HSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G++PF C  C   F  +S  A HLR H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 31/68 (45%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            + ++P+ C  C   F R+ +L                                 H+R H
Sbjct: 7   GSGERPFKCNECGKGFGRRSHL-------------------------------AGHLRLH 35

Query: 181 TGERPFQC 188
           + E+    
Sbjct: 36  SREKSSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 5e-15
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F+Q S L  H+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 1e-13
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K FSQ S L  H+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRI-----HTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F+  S +  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K FSQ S L  H+                            R 
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQ----------------------------RI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F +   L  H R HTGE+P   
Sbjct: 5  SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 17/78 (21%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AFS+   L                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKAFSQTSKL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---ARHQRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 5e-15
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GE+PF+C  C K F Q   L +H R+HTGE+P   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 3e-13
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+P++C+ C K F Q   L +H RI     HT +KP   +
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRI-----HTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     +GE+P+ C  C K F    ++ SH   H G+KP G +S
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 2e-09
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+PF+C  C K F Q                              +L  H+R 
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNI----------------------------HLASHLRI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG KP+ C  C  +F +  +L  H+R HTGE+P   
Sbjct: 5  SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 14/78 (17%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KP+ C  C  AF +  +L                            
Sbjct: 2   SSGSSG-----SGEKPFKCKECGKAFRQNIHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H+R HTGE+P   
Sbjct: 29  ---ASHLRIHTGEKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 6e-15
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K FTQ S L  H+R+HTG +P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 3e-13
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F+Q S L  H+RI     HT  KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-----HTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F   S++ +H+  H G KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F+Q S L  H+                            R 
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQ----------------------------RI 34

Query: 88 HTGERPYQCE 97
          HTG +P    
Sbjct: 35 HTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 7e-09
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F +  +L  H R HTG +P   
Sbjct: 5  SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   F++  +L                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKVFTQNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTG +P   
Sbjct: 29  ---ANHQRIHTGVKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 6e-15
 Identities = 17/42 (40%), Positives = 25/42 (59%)

Query: 175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
               + TG++P++C  C K FTQ S L  H+ +HTGE+P   
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.9 bits (154), Expect = 1e-13
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 83  VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
               + TG++PY+C  C K F+Q S L  H+ I     HT +KP   +
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-----HTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TG++PY C+ C K F   S++  HR  H G+KP G +S
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TG++P++C  C K F+Q S L  H+                              
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRG----------------------------I 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 5e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F +  +L  H   HTGE+P   
Sbjct: 5  SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/78 (17%), Positives = 19/78 (24%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  KPY C  C   F++  +L                            
Sbjct: 2   SSGSSG-----TGKKPYKCNECGKVFTQNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HTGE+P   
Sbjct: 29  ---ARHRGIHTGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 6e-15
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C VC K F   S L  H  VH+GERP   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 2e-13
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C+VC K F   S L  H  +     H+ ++P   +
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-----HSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
                TGE+PY C +C K F V S++  H   H G++P G +S
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 17/69 (24%), Positives = 23/69 (33%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C VC K F   S L  H  +                            
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV---------------------------- 34

Query: 88 HTGERPYQC 96
          H+GERP   
Sbjct: 35 HSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F    +L  H   H+GERP   
Sbjct: 5  SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 15/77 (19%), Positives = 18/77 (23%), Gaps = 36/77 (46%)

Query: 112 HKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF 171
                     T +KPY C  C  AF    +L                             
Sbjct: 3   SGSSG-----TGEKPYKCQVCGKAFRVSSHL----------------------------- 28

Query: 172 SHQVHMRTHTGERPFQC 188
               H   H+GERP   
Sbjct: 29  --VQHHSVHSGERPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 6e-15
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P +C  C K F+  S L  H+R+HTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+P++C  C K FS  S L  H+RI     HT + P   +
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-----HTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+ C  C K F+  S +  H+  H G+ P G +S
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P +C  C K FS  S                             L VH R 
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNS----------------------------QLIVHQRI 34

Query: 88 HTGERPYQC 96
          HTGE P   
Sbjct: 35 HTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KP+ C  C  SF     L +H R HTGE P   
Sbjct: 5  SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 16/78 (20%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KP+ C  C  +FS    L                            
Sbjct: 2   SSGSSG-----TGEKPHECRECGKSFSFNSQL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH R HTGE P   
Sbjct: 29  ---IVHQRIHTGENPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 8e-15
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F   S L+ H+R+HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F   S L+ H+RI     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-----HTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 18/44 (40%), Positives = 26/44 (59%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F   SY++ H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F   S L+ H+                            R 
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRHQ----------------------------RI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F    YL  H R HTGE+P   
Sbjct: 5  SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 16/78 (20%), Positives = 19/78 (24%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   F    YL                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKVFRHNSYL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---SRHQRIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.3 bits (163), Expect = 8e-15
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K FTQ S L  H+ +HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.1 bits (152), Expect = 3e-13
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F+Q S L  H+ I     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-----HTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.6 bits (130), Expect = 3e-10
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F   S++  HR  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F+Q S L  H+                              
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVRHRG----------------------------I 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F +  +L  H   HTGE+P   
Sbjct: 5  SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   F++  +L                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKVFTQNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HTGE+P   
Sbjct: 29  ---VRHRGIHTGEKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 66.4 bits (163), Expect = 8e-15
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GE+P++C  C K F  KS L  H+R H G    + 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + +GE+PY+C  C K F  KS L  H+R      H        
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERT-----HAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GE+P++C  C K F  KS                             L VH RT
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKS----------------------------LLIVHERT 34

Query: 88 HTGERPYQC 96
          H G      
Sbjct: 35 HAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
           +     +GE+PY C+ C K F  KS +  H  +H G      
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 15/37 (40%), Positives = 17/37 (45%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           SG KPY C  C  +F  K  L +H RTH G      
Sbjct: 7  GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 15/78 (19%), Positives = 18/78 (23%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          + +KPY C  C  AF  K  L                            
Sbjct: 2   SSGSSG-----SGEKPYECNECGKAFIWKSLL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
               VH RTH G      
Sbjct: 29  ---IVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+KP+ C  C   F  KS   VH RTH
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 66.0 bits (162), Expect = 8e-15
 Identities = 13/41 (31%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE P++C  C K F++K  L +H++ H+G+   + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.4 bits (145), Expect = 2e-12
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              + TGE PY+C  C K FS+K  L +H++      H+       
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKT-----HSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           +G  PY C  C   F RK  L  H +TH+G+     
Sbjct: 7  GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.7 bits (125), Expect = 1e-09
 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE P++C  C K FS+K                              L  H +T
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKD----------------------------QLVSHQKT 34

Query: 88 HTGERPYQC 96
          H+G+     
Sbjct: 35 HSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.4 bits (119), Expect = 9e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
           +     TGE PY C  C K F+ K  + SH+ +H G      
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+ P+ C  C   F+ K Q   H +TH
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 7e-05
 Identities = 14/68 (20%), Positives = 18/68 (26%), Gaps = 31/68 (45%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            T + PY C  C   FSRK  L                                 H +TH
Sbjct: 7   GTGENPYECCECGKVFSRKDQL-------------------------------VSHQKTH 35

Query: 181 TGERPFQC 188
           +G+     
Sbjct: 36  SGQSGPSS 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 66.0 bits (162), Expect = 1e-14
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+ ++C  C K F++ S L+ H+++HTGE+P   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 62.2 bits (152), Expect = 2e-13
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+ Y+C  C K FS+ S L+ H++I     HT +KP   +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-----HTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+ Y C+ C K F+  S ++ H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+ ++C  C K FS+ S                             L  H + 
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNS----------------------------QLSQHQKI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G K Y C  C   F R   L  H + HTGE+P   
Sbjct: 5  SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 15/78 (19%), Positives = 19/78 (24%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +K Y C  C   FSR   L                            
Sbjct: 2   SSGSSG-----TGEKRYKCNECGKVFSRNSQL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H + HTGE+P   
Sbjct: 29  ---SQHQKIHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-14
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TG +P+QC  C K F+Q S L  H+RVHTGE+P   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 2e-13
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TG +PYQC  C K FSQ S L  H+R+     HT +KP   +
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-----HTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 7e-10
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TG +PY C+ C K F+  S +  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 28/71 (39%)

Query: 27 IHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMR 86
              + TG +P+QC  C K FSQ S                             L  H R
Sbjct: 2  SSGSSGTGGKPYQCNECGKAFSQTS----------------------------KLARHQR 33

Query: 87 THTGERPYQCE 97
           HTGE+P    
Sbjct: 34 VHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F +   L  H R HTGE+P   
Sbjct: 5  SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 17/78 (21%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  KPY C  C  AFS+   L                            
Sbjct: 2   SSGSSG-----TGGKPYQCNECGKAFSQTSKL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---ARHQRVHTGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.1 bits (162), Expect = 1e-14
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F   SS   H+R+HTG+RP   
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F   SS   H+R+     HT  +P   +
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-----HTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.4 bits (129), Expect = 4e-10
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F   S  T H+  H G +P G +S
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.7 bits (122), Expect = 4e-09
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C+ C K F   S+   H+                            R 
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ----------------------------RL 34

Query: 88 HTGERPYQCE 97
          HTG+RP    
Sbjct: 35 HTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F        H R HTG+RP   
Sbjct: 5  SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 17/78 (21%), Positives = 21/78 (26%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AF                               +S 
Sbjct: 2   SSGSSG-----TGEKPYKCMECGKAFGDN----------------------------SSC 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             HQ   R HTG+RP   
Sbjct: 29  TQHQ---RLHTGQRPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-14
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K FTQ S L  H+ +HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 3e-13
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F+Q S L  H+ I     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-----HTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F   S++  HR  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 4e-09
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F+Q S L  H+                              
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRG----------------------------I 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F +  +L  H   HTGE+P   
Sbjct: 5  SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   F++  +L                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKVFTQNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HTGE+P   
Sbjct: 29  ---ARHRGIHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 66.0 bits (162), Expect = 1e-14
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F+Q + L  H+RVHTGE+P   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C+ C K FSQ + L  H+R+     HT +KP   +
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRV-----HTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 51.7 bits (125), Expect = 1e-09
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F+  +++  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K FSQ +                            +L  H R 
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTT----------------------------HLIQHQRV 34

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 35 HTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C  +F +  +L  H R HTGE+P   
Sbjct: 5  SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 17/78 (21%), Positives = 22/78 (28%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C  AFS+  +L                            
Sbjct: 2   SSGSSG-----TGEKPYECKECGKAFSQTTHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTGE+P   
Sbjct: 29  ---IQHQRVHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 1e-14
 Identities = 16/41 (39%), Positives = 24/41 (58%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K F + S L  H+ +HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.7 bits (151), Expect = 4e-13
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F + S L  H+ I     HT +KP   +
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-----HTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 6e-10
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C  C K F   S++  H+  H G+KP G +S
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F + S                            +L  H   
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNS----------------------------HLARHQLI 34

Query: 88 HTGERPYQCE 97
          HTGE+P    
Sbjct: 35 HTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F R  +L  H   HTGE+P   
Sbjct: 5  SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 15/78 (19%), Positives = 19/78 (24%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   F R  +L                            
Sbjct: 2   SSGSSG-----TGEKPYKCHECGKVFRRNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H   HTGE+P   
Sbjct: 29  ---ARHQLIHTGEKPSGP 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 67.9 bits (165), Expect = 1e-14
 Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 8/112 (7%)

Query: 25  LEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRM-----HIPYIQYYCDACDATFTTKQ 79
            +++    TG   F+C  C   +     L  H           +     +    +   K+
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 80  NLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
           +L         ++  +C  C   F     L+ H    I   H +      +G
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH---MIKTKHYQKVSGPSSG 115

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 66.3 bits (161), Expect = 4e-14
 Identities = 17/138 (12%), Positives = 36/138 (26%), Gaps = 33/138 (23%)

Query: 79  QNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSR 138
            + +++    TG   ++C+ C+  +     L  H     +Y     +  +      +  R
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 139 KQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQK 198
           K+                               S          ++  +C  C   F   
Sbjct: 65  KR-------------------------------SLLEMEGKEDAQKVLKCMYCGHSFESL 93

Query: 199 SSLNTH--KRVHTGERPY 214
             L+ H  K  H  +   
Sbjct: 94  QDLSVHMIKTKHYQKVSG 111

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 61.7 bits (149), Expect = 2e-12
 Identities = 19/98 (19%), Positives = 28/98 (28%), Gaps = 7/98 (7%)

Query: 174 QVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHR 233
           +++    TG   F+C  CS  +     L  H    TG         D     +      R
Sbjct: 8   KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 234 ------WSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH 265
                       K   C  C  +F S    +VH+    
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 7/102 (6%)

Query: 1   MKLHSGNKPYHCTACDASFCRKPYLEIHMR-----THTGERPFQCVVCLKRFSQKSALNT 55
             + +G   + C  C A++     L +HM                        +K +L  
Sbjct: 11  GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLE 70

Query: 56  HKRMHIPYIQYYCDACDATFTTKQNLEVHM--RTHTGERPYQ 95
            +          C  C  +F + Q+L VHM    H  +    
Sbjct: 71  MEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 55.9 bits (134), Expect = 3e-10
 Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 2/98 (2%)

Query: 48  SQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKS 107
           S  S+   +  +     ++ C  C A + T   L VHM   TG         +    ++ 
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRW 60

Query: 108 SLNTHKRIHIN-YLHTEDKPYHCTGCDAAFSRKQYLEV 144
           S    + +          K   C  C  +F   Q L V
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSV 98

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 55.9 bits (134), Expect = 3e-10
 Identities = 21/101 (20%), Positives = 30/101 (29%), Gaps = 4/101 (3%)

Query: 196 TQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS--HVGDKPFGCTSCHLTFTS 253
           +  SS   +  + TG   + C  C   +     +T H     H  D      + +    S
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 254 KSQFAVHLRTH--HTVGANHVCNVCGRSFVRDSYLIRHQNK 292
           K +    L             C  CG SF     L  H  K
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK 102

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 1e-14
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + +GERP+ C  C K F + S L  H + H  E+    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 6e-13
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GERPY C  C K F + S L  H +      H  +K    +
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-----HFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 8e-11
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
                +GERPY C+ C K F   S++  H   H  +K  G +S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 8e-10
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           SG +PY C  C  +F R  +L  H++ H  E+    
Sbjct: 7  GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 28/69 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + +GERP+ C  C K F + S L  H                             + 
Sbjct: 3  SGSSGSGERPYGCNECGKNFGRHSHLIEHL----------------------------KR 34

Query: 88 HTGERPYQC 96
          H  E+    
Sbjct: 35 HFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/78 (12%), Positives = 18/78 (23%), Gaps = 36/78 (46%)

Query: 112 HKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLF 171
                     + ++PY C  C   F R  +L                             
Sbjct: 3   SGSSG-----SGERPYGCNECGKNFGRHSHL----------------------------- 28

Query: 172 SHQVHMRTHTGERPFQCA 189
               H++ H  E+    +
Sbjct: 29  --IEHLKRHFREKSSGPS 44

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 65.8 bits (161), Expect = 1e-14
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 176 HMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACD 217
              + TGE+PF C    C  RF++   L+ H+R H+G +P    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 57.3 bits (139), Expect = 1e-11
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 84  HMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTG 131
              + TGE+P+ C    C  RFS+   L+ H+R      H+  KP   + 
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-----HSGVKPSGPSS 47

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 53.8 bits (130), Expect = 3e-10
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 203 THKRVHTGERPYACD--ICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+P+AC    C  RF+    ++ HR SH G KP G +S
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 50.0 bits (120), Expect = 7e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 1  MKLHSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQC 40
              +G KP+ CT   C   F R   L  H R+H+G +P   
Sbjct: 4  GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 30/72 (41%)

Query: 28 HMRTHTGERPFQCVV--CLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHM 85
             + TGE+PF C    C  RFS+                               L  H 
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSD----------------------------ELSRHR 34

Query: 86 RTHTGERPYQCE 97
          R+H+G +P    
Sbjct: 35 RSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 16/81 (19%), Positives = 23/81 (28%), Gaps = 38/81 (46%)

Query: 111 THKRIHINYLHTEDKPYHCT--GCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLT 168
           +          T +KP+ CT  GC   FSR   L                          
Sbjct: 2   SSGSSG-----TGEKPFACTWPGCGWRFSRSDEL-------------------------- 30

Query: 169 SLFSHQVHMRTHTGERPFQCA 189
                  H R+H+G +P   +
Sbjct: 31  -----SRHRRSHSGVKPSGPS 46

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 2e-14
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + TGE+P++C  C K FTQ S L  H+RVHTG +P   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 7e-13
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TGE+PY+C  C K F+Q S L  H+R+     HT  KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-----HTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
           +     TGE+PY C+ C K F   S++  HR  H G KP G +S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 28/70 (40%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TGE+P++C  C K F+Q S L  H+R                             
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRR----------------------------V 34

Query: 88 HTGERPYQCE 97
          HTG +P    
Sbjct: 35 HTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             +G KPY C  C   F +  +L  H R HTG +P   
Sbjct: 5  SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/78 (17%), Positives = 20/78 (25%), Gaps = 36/78 (46%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T +KPY C  C   F++  +L                            
Sbjct: 2   SSGSSG-----TGEKPYKCNECGKVFTQNSHL---------------------------- 28

Query: 171 FSHQVHMRTHTGERPFQC 188
                H R HTG +P   
Sbjct: 29  ---ARHRRVHTGGKPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 65.2 bits (160), Expect = 2e-14
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +GE P++C+ C K F +K  L +H+R H GE   + 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 58.7 bits (143), Expect = 4e-12
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
              +GE PY+C  C K F++K  L +H+R      H  +     
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRT-----HAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 16/39 (41%), Positives = 18/39 (46%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG  PY C+ C  +F RK  L  H RTH GE     
Sbjct: 3  SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 15/67 (22%), Positives = 20/67 (29%), Gaps = 28/67 (41%)

Query: 30 RTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHT 89
             +GE P++C  C K F++K                              L  H RTH 
Sbjct: 3  SGSSGENPYECSECGKAFNRKD----------------------------QLISHQRTHA 34

Query: 90 GERPYQC 96
          GE     
Sbjct: 35 GESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 205 KRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
               +GE PY C  C K F  K  + SH+ +H G+     
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 17/68 (25%), Positives = 21/68 (30%), Gaps = 31/68 (45%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            + + PY C+ C  AF+RK                              L SHQ   RTH
Sbjct: 5   SSGENPYECSECGKAFNRK----------------------------DQLISHQ---RTH 33

Query: 181 TGERPFQC 188
            GE     
Sbjct: 34  AGESGPSS 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 64.5 bits (158), Expect = 3e-14
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +GE+PF C+ C K F+ KS L  H++ H  E+P   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 57.9 bits (141), Expect = 8e-12
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           SG KP+ C+ C+ +F  K YL +H +TH  E+P   
Sbjct: 5  SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 57.9 bits (141), Expect = 9e-12
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              +GE+P+ C  C K FS KS L  H++      H E+KP   +
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQT-----HAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 205 KRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
               +GE+P+ C  C+K F+ KSY+  H+ +H  +KP G +S
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 28/67 (41%)

Query: 30 RTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHT 89
             +GE+PF C  C K FS KS                             L VH +TH 
Sbjct: 3  SGSSGEKPFGCSCCEKAFSSKS----------------------------YLLVHQQTHA 34

Query: 90 GERPYQC 96
           E+P   
Sbjct: 35 EEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 31/68 (45%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
            + +KP+ C+ C+ AFS K YL                                VH +TH
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYL-------------------------------LVHQQTH 33

Query: 181 TGERPFQC 188
             E+P   
Sbjct: 34  AEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 235 SHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
              G+KPFGC+ C   F+SKS   VH +TH
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 63.8 bits (156), Expect = 5e-14
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
              +  GE P+ C  C K FTQ+ SL  H+R  +   P +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
              +  GE PY C  C K F+Q+ SL  H+R       ++  P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-----CSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPF 38
            G  PY C  C  SF ++  L +H R+ +   P 
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 28/67 (41%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             +  GE P+ C  C K F+Q+                             +L VH R+
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRG----------------------------SLAVHQRS 33

Query: 88 HTGERPY 94
           +   P 
Sbjct: 34 CSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 43.8 bits (104), Expect = 1e-06
 Identities = 11/39 (28%), Positives = 14/39 (35%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
                 GE PY C  C K F  +  +  H+ S     P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
              S  G+ P+ C  C  +FT +   AVH R+ 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 63.4 bits (155), Expect = 1e-13
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKR-VHTGERPYAC 216
              + TG++P++C  C K F Q +SL  H R  HTGE+P   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 61.4 bits (150), Expect = 5e-13
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + TG++PY+C  C K F Q +SL  H R    Y HT +KP   +
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWR----YYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSH-RWSHVGDKPFGCTS 246
           +     TG++PY C  C K F   + +  H R+ H G+KP G +S
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 53.3 bits (129), Expect = 4e-10
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 27/69 (39%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRT 87
             + TG++P++C+ C K F Q ++L  H R                             
Sbjct: 3  SGSSGTGKKPYECIECGKAFIQNTSLIRHWR---------------------------YY 35

Query: 88 HTGERPYQC 96
          HTGE+P   
Sbjct: 36 HTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMR-THTGERPFQC 40
             +G KPY C  C  +F +   L  H R  HTGE+P   
Sbjct: 5  SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 17/78 (21%), Positives = 20/78 (25%), Gaps = 35/78 (44%)

Query: 111 THKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSL 170
           +          T  KPY C  C  AF +                             TSL
Sbjct: 2   SSGSSG-----TGKKPYECIECGKAFIQN----------------------------TSL 28

Query: 171 FSHQVHMRTHTGERPFQC 188
             H      HTGE+P   
Sbjct: 29  IRHW--RYYHTGEKPSGP 44

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 62.6 bits (153), Expect = 1e-13
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
              +G+R ++C  C K F QK SL  H+R+HTG  P +
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPY 127
              +G+R Y+C+ C K F QK SL  H+RI     HT   P 
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERI-----HTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 46.8 bits (112), Expect = 9e-08
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPF 38
           SG + Y C  C  SF +K  L +H R HTG  P 
Sbjct: 5  SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 45.3 bits (108), Expect = 3e-07
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 30 RTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
             +G+R ++C  C K F QK +L  H+R+H
Sbjct: 3  SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 205 KRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF 242
               +G+R Y C  C K F  K  +T H   H G  P 
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
              + +GE+   C  C K F   S+L  H+RVH GE+     
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.3 bits (134), Expect = 7e-11
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT 130
              + +GE+ + C+ C K F   S+L  H+R+     H  +K    +
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRV-----HMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS 246
                +GE+ + CD C K F   S +  H+  H+G+K  G +S
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             SG K + C  C  +FC    L IH R H GE+    
Sbjct: 5  SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 6e-08
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
             + +GE+   C  C K F   SAL  H+R+H
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 11/34 (32%), Positives = 13/34 (38%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+K   C  C   F   S   +H R H
Sbjct: 2   SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 59.3 bits (144), Expect = 6e-12
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 174 QVHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYV 229
                  +  R   C+   C K + + S L  H R HTGE+P++C    C++RFA    +
Sbjct: 6   SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDEL 65

Query: 230 TSHRWSH 236
           + HR +H
Sbjct: 66  SRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 59.3 bits (144), Expect = 6e-12
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 50  KSALNTHKRMHIPYIQYYCD--ACDATFTTKQNLEVHMRTHTGERPYQCEV--CNKRFSQ 105
            S  +  +        + C    C  T+    +L+ H RTHTGE+P+ C    C +RF++
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 106 KSSLNTHKRIH 116
              L+ H+R H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 57.0 bits (138), Expect = 3e-11
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 4  HSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVV--CLKRFSQKSALNTHKRM 59
           S  + + C+   C  ++ +  +L+ H RTHTGE+PF C    C +RF++   L+ H+R 
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71

Query: 60 H 60
          H
Sbjct: 72 H 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.0 bits (125), Expect = 2e-09
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 198 KSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCT--SCHLTFTS 253
            S  +  +   +  R + C    C K +   S++ +H  +H G+KPF C+   C   F  
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 254 KSQFAVHLRTH 264
             + + H RTH
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 9/62 (14%)

Query: 81  LEVHMRTHTGERPYQCEV--CNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT--GCDAAF 136
                   +  R + C    C K + + S L  H R      HT +KP+ C+  GC+  F
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-----HTGEKPFSCSWKGCERRF 59

Query: 137 SR 138
           +R
Sbjct: 60  AR 61

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.2 bits (139), Expect = 1e-11
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              + T  + + C  C K FT+   L  H+++HT +   + 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
              + T  + Y C  C K F++   L  H++IH
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.9 bits (107), Expect = 4e-07
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
             + T  + + C  C K F++   L  H+++H
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             + +K Y+C  C  +F R  +L  H + HT +     
Sbjct: 5  SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
                T  + Y C+ C K F    ++T H+  H        
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 58.8 bits (142), Expect = 1e-11
 Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 9/75 (12%)

Query: 31 THTGERPFQCVVCLKRFSQKSALNTH-KRMHI---PYIQYYC-----DACDATFTTKQNL 81
              +       C + FS    L TH    H+       + C          +F  K  L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 82 EVHMRTHTGERPYQC 96
            H+R HTGE+    
Sbjct: 79 VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 53.4 bits (128), Expect = 1e-09
 Identities = 15/76 (19%), Positives = 22/76 (28%), Gaps = 9/76 (11%)

Query: 179 THTGERPFQCAVCSKRFTQKSSLNTH-KRVHTGERPYA--------CDICDKRFAVKSYV 229
               +       C + F+    L TH    H G             C    K F  K  +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 230 TSHRWSHVGDKPFGCT 245
            +H   H G+K    +
Sbjct: 79  VNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 50.4 bits (120), Expect = 2e-08
 Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 14/82 (17%)

Query: 59  MHIPYIQYYCDACDATFTTKQNLEVHM-RTHTGERPYQ--------CEVCNKRFSQKSSL 109
           +    +     +CD TF+T   L  H+   H G             C    K F  K  L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 110 NTHKRIHINYLHTEDKPYHCTG 131
             H R+     HT +K    +G
Sbjct: 79  VNHIRV-----HTGEKSGPSSG 95

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 18/109 (16%), Positives = 28/109 (25%), Gaps = 39/109 (35%)

Query: 87  THTGERPYQCEVCNKRFSQKSSLNTH-KRIHINYLHTEDKPY-----HCTGCDAAFSRKQ 140
               +     + C++ FS    L TH    H+     E   +      C     +F  K 
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG--GPEQNNHVCYWEECPREGKSFKAKY 76

Query: 141 YLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCA 189
            L                                 H+R HTGE+    +
Sbjct: 77  KL-------------------------------VNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 22/105 (20%), Positives = 24/105 (22%), Gaps = 38/105 (36%)

Query: 120 LHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRT 179
           +           CD  FS    L V H T                               
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHEL-VTHVT-----------------------------ME 48

Query: 180 HTGERPFQ--------CAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
           H G             C    K F  K  L  H RVHTGE+    
Sbjct: 49  HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.0 bits (101), Expect = 6e-06
 Identities = 14/66 (21%), Positives = 21/66 (31%), Gaps = 8/66 (12%)

Query: 233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHV--------CNVCGRSFVRDS 284
           +W           SC  TF++  +   H+   H  G            C   G+SF    
Sbjct: 17  KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 285 YLIRHQ 290
            L+ H 
Sbjct: 77  KLVNHI 82

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.7 bits (95), Expect = 4e-05
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 12 CTACDASFCRKPYLEIHMRTHTGERPFQC 40
          C     SF  K  L  H+R HTGE+    
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 56.9 bits (138), Expect = 2e-11
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC 216
              +GE+P+ CA C + F+  + L  H+++HT +   + 
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.0 bits (120), Expect = 6e-09
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
              +GE+PY C  C + FS  + L  H+++H
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 30 RTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
             +GE+P+ C  C + FS  + L  H++MH
Sbjct: 3  SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.9 bits (104), Expect = 9e-07
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQC 40
           SG KPY C  C  +F     L  H + HT +     
Sbjct: 5  SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 9/40 (22%), Positives = 17/40 (42%)

Query: 205 KRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC 244
               +GE+PY+C  C + F+  + +  H+  H        
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 55.1 bits (132), Expect = 1e-10
 Identities = 20/55 (36%), Positives = 24/55 (43%)

Query: 186 FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           + C  C  R  + S L  H R HT  RPY C  C+  F  K  +T H  S    K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.4 bits (125), Expect = 1e-09
 Identities = 19/52 (36%), Positives = 25/52 (48%)

Query: 65  QYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
           +Y C+ C         L+ H+RTHT  RPY C  CN  F  K +L  H +  
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 5e-08
 Identities = 17/51 (33%), Positives = 22/51 (43%)

Query: 10 YHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          Y C  C     +   L+ H+RTHT  RP+ C  C   F  K  L  H +  
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 8e-08
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 174 QVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGER 212
           + H+RTHT  RP+ C  C+  F  K +L  H +     +
Sbjct: 18  KKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 38 FQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGER 92
          + C  C  R  + S L  H R H     Y+C  C+ +F TK NL  HM++    +
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.7 bits (105), Expect = 8e-07
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 214 YACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           Y C+ C  R    S +  H  +H   +P+ CT C+ +F +K     H+++ 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 94  YQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTT 148
           Y CE C  R  + S L  H R H     T+ +PYHCT C+ +F  K  L  +  +
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTH-----TDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 3e-05
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGER 36
          ++ H+  +PYHCT C+ SF  K  L  HM++    +
Sbjct: 21 IRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 54.3 bits (130), Expect = 3e-10
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS 235
             + H G+R  +C+ C   F ++S+        +  +   C+ C K    ++ +     +
Sbjct: 9   RQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEGN 61

Query: 236 HVGDKPFGCTS 246
             G K  G +S
Sbjct: 62  ESGKKTSGPSS 72

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 50.8 bits (121), Expect = 7e-09
 Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 7/70 (10%)

Query: 25 LEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVH 84
               + H G+R  +C  C   F ++S L+  K          C+ C      +  L   
Sbjct: 6  SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNKD 58

Query: 85 MRTHTGERPY 94
              +G++  
Sbjct: 59 EGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.5 bits (115), Expect = 4e-08
 Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 7/66 (10%)

Query: 51  SALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLN 110
            +    +++H+      C  C   F           T +  +   CE C K   Q+++LN
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALN 56

Query: 111 THKRIH 116
             +   
Sbjct: 57  KDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.5 bits (115), Expect = 4e-08
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 7/60 (11%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
           K+H G++   C+ C   F       I   T +  +   C  C K   Q++ALN  +   
Sbjct: 10 QKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 48.5 bits (115), Expect = 5e-08
 Identities = 16/109 (14%), Positives = 30/109 (27%), Gaps = 43/109 (39%)

Query: 107 SSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKF 166
            S    ++IH       D+   C+ C   F R+                           
Sbjct: 4   GSSGKRQKIH-----LGDRSQKCSKCGIIFIRRS-------------------------- 32

Query: 167 LTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA 215
                       T +  +   C  C K   Q+++LN  +   +G++   
Sbjct: 33  ------------TLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTSG 69

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 47.0 bits (111), Expect = 1e-07
 Identities = 11/66 (16%), Positives = 18/66 (27%), Gaps = 7/66 (10%)

Query: 199 SSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFA 258
            S    +++H G+R   C  C   F         R +    K   C  C      ++   
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56

Query: 259 VHLRTH 264
                 
Sbjct: 57  KDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 8/64 (12%)

Query: 227 SYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYL 286
                 +  H+GD+   C+ C + F  +S          +     +C  C +   +++ L
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRS--------TLSRRKTPMCEKCRKDSCQEAAL 55

Query: 287 IRHQ 290
            + +
Sbjct: 56  NKDE 59

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 51.0 bits (122), Expect = 2e-09
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERP 213
              +  GE PF+C+ C + FTQ++ L  H+R H  +  
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.8 bits (111), Expect = 8e-08
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
              +  GE P++C  C++ F+Q++ L  H+R H
Sbjct: 3   SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.7 bits (103), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERP 37
           +G  P+ C+ CD  F ++ YL  H RTH  +  
Sbjct: 7  GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.9 bits (101), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
             +  GE PF+C  C + F+Q++ L  H+R H
Sbjct: 3  SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.2 bits (99), Expect = 4e-06
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
           +      GE P+ C  CD+ F  ++Y+  H  +H     
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.0 bits (83), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           S   S  G+ PF C+ C   FT ++    H RTH
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 50.0 bits (120), Expect = 5e-09
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHI 117
             R  TG +P+QC  C++ FS+   L  H++ H+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVH 208
             R  TG +PFQC  C + F++   L  H++ H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 47.7 bits (114), Expect = 4e-08
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
            R  TG +PFQC  C + FS+   L  H++ H+
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHV 237
             R  TG +P+ C  CD+ F+   ++  HR  H+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.1 bits (89), Expect = 9e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTH 32
           +  +G KP+ C  CD SF R  +L +H + H
Sbjct: 3  TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 49.9 bits (119), Expect = 7e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC 219
            +    +   C +C K F     LN HK  H+GE+PY+    
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 45.3 bits (107), Expect = 3e-07
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVC 43
                K   C  C   F    +L  H  +H+GE+P+     
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.6 bits (100), Expect = 3e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 65  QYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCN 100
           Q  C+ C   F    +L  H  +H+GE+PY     +
Sbjct: 12  QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.2 bits (99), Expect = 4e-06
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 206 RVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSC 247
                 +  AC+IC K F    ++  H+ SH G+KP+     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.2 bits (99), Expect = 4e-06
 Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 5/47 (10%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGC 132
            +    +   CE+C K F     LN HK       H+ +KPY     
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLS-----HSGEKPYSSGPS 46

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 8/116 (6%)

Query: 3   LHSGNKPYHC--TACDASFCRKPYLEIHMRTHTGERPFQCVV----CLKRFSQKSALNTH 56
           + SG+K Y             +     H  T   +R  + +V       +   +S+    
Sbjct: 6   VDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYR 65

Query: 57  KRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTH 112
                   Q+ C  C   F++  +L+ H+R    E    C VC K F+   S   H
Sbjct: 66  LLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.5 bits (96), Expect = 4e-05
 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 172 SHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTS 231
           S+   +        F C +C   F+   SL  H R    E    C +C K F        
Sbjct: 61  SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALD 118

Query: 232 H 232
           H
Sbjct: 119 H 119

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.5 bits (96), Expect = 5e-05
 Identities = 21/121 (17%), Positives = 35/121 (28%), Gaps = 15/121 (12%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD----ICDKRFAVKSYVTS 231
           ++  H G             T +     H+     +R         I + +   +S    
Sbjct: 13  YLSNHKG--------IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY 64

Query: 232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQN 291
              +      F C  C + F+S      H+R         VC VC + F      + H  
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDHVC 121

Query: 292 K 292
           K
Sbjct: 122 K 122

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 6/98 (6%)

Query: 174 QVHMRTHTGERPFQC----AVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYV 229
           + H  T   +R  +      + + +   +SS             + C +C   F+    +
Sbjct: 31  RYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSL 90

Query: 230 TSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTV 267
             H      +    C  C   FTS      H+   H +
Sbjct: 91  KQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.4 bits (114), Expect = 1e-07
 Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 3/85 (3%)

Query: 182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP 241
            +  +QC +C+ + +      +H+R+        C  C  RF        H  S    K 
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-SKCEYKK 69

Query: 242 FGCTSCHLTFTSKSQFAVHLRTHHT 266
             C  C  TF S      H    H 
Sbjct: 70  LTCLECMRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 17/79 (21%), Positives = 24/79 (30%), Gaps = 3/79 (3%)

Query: 6  GNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQ 65
            + Y C  C+A          H R         C  C  RF        H+     Y +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKK 69

Query: 66 YYCDACDATFTTKQNLEVH 84
            C  C  TF +  ++  H
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 34  GERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERP 93
            +  +QC +C  + S      +H+R+        C  C   F + +  + H  +    + 
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69

Query: 94  YQCEVCNKRFSQKSSLNTHK 113
             C  C + F    S+  H+
Sbjct: 70  LTCLECMRTFKSSFSIWRHQ 89

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 47.5 bits (112), Expect = 3e-06
 Identities = 11/49 (22%), Positives = 16/49 (32%)

Query: 68  CDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
            +A  A  +          T +    YQC VC+        L+ H   H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 46.8 bits (110), Expect = 5e-06
 Identities = 11/49 (22%), Positives = 15/49 (30%)

Query: 12  CTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
             A  A   + P       T +    +QC VC         L+ H   H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 6/55 (10%), Positives = 12/55 (21%)

Query: 215 ACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGA 269
             +      +          +      + C  C     S      H+ +H   G 
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 3/78 (3%)

Query: 172 SHQVHMRTHTGERP---FQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSY 228
           S  V     + ++P         S   ++  +        +    Y C +C         
Sbjct: 136 SGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLD 195

Query: 229 VTSHRWSHVGDKPFGCTS 246
           + +H  SH        TS
Sbjct: 196 LDAHVASHGLHGNMTLTS 213

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 9/52 (17%), Positives = 15/52 (28%)

Query: 37  PFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTH 88
                      S+  A             Y C  C A   +  +L+ H+ +H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 37.6 bits (86), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 88  HTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKP 126
            +GE+PY C VC  RF +K  ++ H R H   +      
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS 43

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 184 RPFQCAV--CSKRFTQKSSLNTHKRVHTGER 212
           RPF C    C KRFT+   L  HKR HTGE+
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 8  KPYHCT--ACDASFCRKPYLEIHMRTHTGER 36
          +P+ CT   C   F R   L+ H RTHTGE+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237

 Score = 40.6 bits (94), Expect = 3e-04
 Identities = 7/52 (13%), Positives = 15/52 (28%)

Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHI 117
           +Y +       +     +H     GE+  Q E   +       L     + +
Sbjct: 181 WYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGER 212
           R F C VC++ F ++  L  H R HT E+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	292
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.98
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.97
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.97
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.95
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.95
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.94
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.94
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.94
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.9
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.9
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.9
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.9
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.89
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.88
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.88
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.88
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.86
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.85
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.85
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.84
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.84
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.84
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.83
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.83
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.82
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.82
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.8
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.79
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.79
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.77
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.77
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.77
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.77
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.75
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.75
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.74
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.74
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.73
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.73
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.73
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.73
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.72
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.71
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.7
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.7
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.7
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.7
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.7
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.69
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.69
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.68
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.68
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.68
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.68
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.67
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.66
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.65
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.65
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.64
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.64
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.63
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.62
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.61
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.57
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.56
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.55
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.51
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.49
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.49
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.49
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.49
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.49
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.49
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.49
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.48
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.48
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.48
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.48
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.47
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.47
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.47
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.46
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.46
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.46
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.46
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.46
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.46
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.46
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.45
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.45
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.44
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.44
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.44
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.43
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.43
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.42
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.42
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.42
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.41
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.39
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.39
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.38
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.38
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.37
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.37
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.36
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.35
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.35
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.34
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.33
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.32
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.32
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.31
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.31
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.3
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.3
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.29
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.28
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.27
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.27
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.26
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.26
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.26
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.25
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.24
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.23
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.22
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.21
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.21
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.17
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.11
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.04
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.03
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.02
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.0
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.96
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.93
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.93
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.92
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.91
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.9
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.87
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.82
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.81
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.71
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.7
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.69
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.68
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.68
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.66
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.63
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.58
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.57
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.56
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.56
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.54
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.54
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.53
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.53
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.53
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.53
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.53
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.52
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.52
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.51
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.51
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.5
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.5
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.49
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.49
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.49
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.46
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.85
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.46
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.45
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.83
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.44
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.44
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.4
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.7
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.69
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.16
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.1
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.02
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.82
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.7
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.39
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.36
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.98
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.71
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.29
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.17
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.76
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.91
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.12
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	93.02
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	91.83
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	91.68
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.67
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.63
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	90.23
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	89.98
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.65
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.52
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	88.63
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	87.54
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.38
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.45
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	86.37
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.12
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.39
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.82
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	83.64
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	82.99
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	82.76
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	81.84
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	81.48
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	80.18

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.3e-44  Score=274.89  Aligned_cols=185  Identities=39%  Similarity=0.823  Sum_probs=126.7

Q ss_pred             hhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHHHHHHhcCCCCceecCcccc
Q psy4830          22 KPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNK  101 (292)
Q Consensus        22 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  101 (292)
                      ...|..|+..|.++++|.|++|++.|.+...|..|++.|.+..+|.|++|++.|.+...|..|+++|.++++|.|++|++
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            45677788888888888888888888888888888888888788888888888888888888888888888888888888


Q ss_pred             ccCChHHHHHHHHHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCcchhhhhcchhhhhhhcccCC
Q psy4830         102 RFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHT  181 (292)
Q Consensus       102 ~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~  181 (292)
                      .|.+...|..|+++|.                                                                
T Consensus        86 ~f~~~~~l~~H~~~h~----------------------------------------------------------------  101 (190)
T 2i13_A           86 SFSQRANLRAHQRTHT----------------------------------------------------------------  101 (190)
T ss_dssp             EESCHHHHHHHHHHHH----------------------------------------------------------------
T ss_pred             ccCCHHHHHHHHHhcC----------------------------------------------------------------
Confidence            8888888888776542                                                                


Q ss_pred             CCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHh
Q psy4830         182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHL  261 (292)
Q Consensus       182 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  261 (292)
                      ++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|+++|.+..+|..|+
T Consensus       102 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  181 (190)
T 2i13_A          102 GEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ  181 (190)
T ss_dssp             TCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHH
Confidence            34568888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hhhcCCCCCc
Q psy4830         262 RTHHTVGANH  271 (292)
Q Consensus       262 ~~hh~~~~~~  271 (292)
                      ++| .+++||
T Consensus       182 ~~H-~~~k~~  190 (190)
T 2i13_A          182 RTH-TGKKTS  190 (190)
T ss_dssp             TTC-------
T ss_pred             Hhc-CCCCCC
Confidence            886 455554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=6.7e-44  Score=270.94  Aligned_cols=177  Identities=45%  Similarity=0.913  Sum_probs=143.3

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHH
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNL   81 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (292)
                      +++.++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|.+..+|.|++|++.|.+...|
T Consensus        14 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   93 (190)
T 2i13_A           14 ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANL   93 (190)
T ss_dssp             -----------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             hhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCceecCccccccCChHHHHHHHHHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCc
Q psy4830          82 EVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNT  161 (292)
Q Consensus        82 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~  161 (292)
                      ..|+++|.++++|.|++|++.|.+...|..|+++|.                                            
T Consensus        94 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--------------------------------------------  129 (190)
T 2i13_A           94 RAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT--------------------------------------------  129 (190)
T ss_dssp             HHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH--------------------------------------------
T ss_pred             HHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC--------------------------------------------
Confidence            999999999999999999999999999999987653                                            


Q ss_pred             chhhhhcchhhhhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcc
Q psy4830         162 WSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP  241 (292)
Q Consensus       162 ~~~~~~~~~~~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  241 (292)
                                          ++++|.|++|++.|.+.+.|..|+++|++++||.|++|++.|.+...|..|+++|+|++|
T Consensus       130 --------------------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          130 --------------------GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             --------------------CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             --------------------CCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence                                346788999999999999999999999999999999999999999999999999999988


Q ss_pred             e
Q psy4830         242 F  242 (292)
Q Consensus       242 ~  242 (292)
                      |
T Consensus       190 ~  190 (190)
T 2i13_A          190 S  190 (190)
T ss_dssp             -
T ss_pred             C
Confidence            6

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=6.8e-37  Score=232.29  Aligned_cols=165  Identities=28%  Similarity=0.615  Sum_probs=115.9

Q ss_pred             CCCccc--ccchhhcCChhHHHHHHhhcCCCcceec--ccccccCCChhHHHHHHHhcCCCCceecC--ccccccCChHH
Q psy4830          35 ERPFQC--VVCLKRFSQKSALNTHKRMHIPYIQYYC--DACDATFTTKQNLEVHMRTHTGERPYQCE--VCNKRFSQKSS  108 (292)
Q Consensus        35 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~  108 (292)
                      .++|.|  +.|++.|.+...|..|++.|.+..+|.|  ++|++.|.+...|..|+++|.++++|.|+  .|++.|.+...
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   89 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN   89 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHH
Confidence            344555  3455555555555555555555555555  55666666666666666666666666666  66666666666


Q ss_pred             HHHHHHHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCcchhhhhcchhhhhhhcccC-CCCCCcc
Q psy4830         109 LNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH-TGERPFQ  187 (292)
Q Consensus       109 l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~-~~~~~~~  187 (292)
                      |..|++..                                                               | .++++|.
T Consensus        90 l~~H~~~~---------------------------------------------------------------h~~~~~~~~  106 (190)
T 1tf6_A           90 MKKHFNRF---------------------------------------------------------------HNIKICVYV  106 (190)
T ss_dssp             HHHHHHTT---------------------------------------------------------------SSTTTSCCE
T ss_pred             HHHHHHHh---------------------------------------------------------------cCCCcceee
Confidence            66665321                                                               1 1345688


Q ss_pred             c--cccccccCCchHHHHHHhhhcCCCCccccc--cccccccchhhhhhhccccCCcceeCCc---cccccCChhHHHHH
Q psy4830         188 C--AVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTS---CHLTFTSKSQFAVH  260 (292)
Q Consensus       188 C--~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~---C~~~f~~~~~L~~H  260 (292)
                      |  +.|++.|.+.+.|..|+++|++++||.|++  |+++|.+...|..|+++|+|   |.|+.   |++.|.+...|..|
T Consensus       107 C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H  183 (190)
T 1tf6_A          107 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKH  183 (190)
T ss_dssp             ECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHH
T ss_pred             CCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHH
Confidence            8  778888888888888888888888888877  88888888888888888887   88888   88888888888888


Q ss_pred             hhhhc
Q psy4830         261 LRTHH  265 (292)
Q Consensus       261 ~~~hh  265 (292)
                      +++||
T Consensus       184 ~~~h~  188 (190)
T 1tf6_A          184 VAECH  188 (190)
T ss_dssp             HTTCC
T ss_pred             HHhhc
Confidence            88875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=1.6e-36  Score=230.20  Aligned_cols=170  Identities=35%  Similarity=0.648  Sum_probs=147.8

Q ss_pred             cccCCCCccC--CcchhhcCChhHHHHHHhhhcCCCCccc--ccchhhcCChhHHHHHHhhcCCCcceecc--cccccCC
Q psy4830           3 LHSGNKPYHC--TACDASFCRKPYLEIHMRTHTGERPFQC--VVCLKRFSQKSALNTHKRMHIPYIQYYCD--ACDATFT   76 (292)
Q Consensus         3 ~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~   76 (292)
                      +..+.++|.|  +.|++.|.+...|..|+++|.++++|.|  +.|++.|.+...|..|+++|.+..+|.|+  .|++.|.
T Consensus         6 ~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   85 (190)
T 1tf6_A            6 LPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT   85 (190)
T ss_dssp             ----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEES
T ss_pred             ccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccC
Confidence            4456889999  6899999999999999999999999999  88999999999999999999999999999  8999999


Q ss_pred             ChhHHHHHH-Hhc-CCCCceec--CccccccCChHHHHHHHHHhhcccCCCCCCccCCCchhhhchhHHHhhhhhhhhcc
Q psy4830          77 TKQNLEVHM-RTH-TGERPYQC--EVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAV  152 (292)
Q Consensus        77 ~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~  152 (292)
                      +...|..|+ +.| .++++|.|  ++|++.|.+...|..|+++|                                    
T Consensus        86 ~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H------------------------------------  129 (190)
T 1tf6_A           86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH------------------------------------  129 (190)
T ss_dssp             CHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGG------------------------------------
T ss_pred             CHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHh------------------------------------
Confidence            999999999 666 46789999  88999999999999887654                                    


Q ss_pred             cCCCCCCCcchhhhhcchhhhhhhcccCCCCCCccccc--cccccCCchHHHHHHhhhcCCCCccccc---cccccccch
Q psy4830         153 MQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI---CDKRFAVKS  227 (292)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~---C~k~f~~~~  227 (292)
                                                  +++++|.|++  |++.|.+.+.|..|+++|++   |.|++   |++.|.+..
T Consensus       130 ----------------------------~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~  178 (190)
T 1tf6_A          130 ----------------------------TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWT  178 (190)
T ss_dssp             ----------------------------SSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHH
T ss_pred             ----------------------------CCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHH
Confidence                                        3456788877  88888888888888888887   88888   888888888


Q ss_pred             hhhhhhccccCC
Q psy4830         228 YVTSHRWSHVGD  239 (292)
Q Consensus       228 ~L~~H~~~h~~~  239 (292)
                      .|..|+++|+++
T Consensus       179 ~l~~H~~~h~~e  190 (190)
T 1tf6_A          179 LYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHTTCC--
T ss_pred             HHHHHHHhhcCC
Confidence            888888888764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.98  E-value=3.9e-32  Score=199.32  Aligned_cols=104  Identities=31%  Similarity=0.613  Sum_probs=59.4

Q ss_pred             ccccccccCCchHHHHHHhhhcCCCCccccc--cccccccchhhhhhhccccCCcceeCCc--cccccCChhHHHHHhhh
Q psy4830         188 CAVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       188 C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~  263 (292)
                      |+.|++.|.+...|..|+++|.+++||.|++  |++.|.+...|..|+++|+++++|.|++  |+++|.+..+|..|++.
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            4444555555555666655555555566653  6666666556666655555555566655  66666666666666532


Q ss_pred             hcCCCCCcccCC--CCCCccChHHHHhhhc
Q psy4830         264 HHTVGANHVCNV--CGRSFVRDSYLIRHQN  291 (292)
Q Consensus       264 hh~~~~~~~C~~--C~~~f~~~~~l~~H~r  291 (292)
                      .|+++++|.|++  |++.|.+.+.|..|++
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHH
Confidence            234555566655  6666666666655554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=3.8e-32  Score=199.40  Aligned_cols=91  Identities=41%  Similarity=0.849  Sum_probs=82.8

Q ss_pred             hcccCCCCCCccccc--cccccCCchHHHHHHhhhcCCCCccccc--cccccccchhhhhhh-ccccCCcceeCCc--cc
Q psy4830         176 HMRTHTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHR-WSHVGDKPFGCTS--CH  248 (292)
Q Consensus       176 h~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~-~~h~~~~~~~C~~--C~  248 (292)
                      |+++|.++++|.|++  |++.|.+...|..|+++|.++++|.|++  |++.|.+...|..|+ ++|++++||.|++  |+
T Consensus        58 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~  137 (155)
T 2gli_A           58 HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCT  137 (155)
T ss_dssp             HTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTC
T ss_pred             HHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCc
Confidence            334445667899985  9999999999999999999999999998  999999999999998 8999999999998  99


Q ss_pred             cccCChhHHHHHhhhhcC
Q psy4830         249 LTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       249 ~~f~~~~~L~~H~~~hh~  266 (292)
                      ++|.+..+|..|+++||+
T Consensus       138 ~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          138 KRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CEESSHHHHHHHHHHSCC
T ss_pred             cccCCHHHHHHHHHhhcC
Confidence            999999999999999863

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.97  E-value=1.8e-31  Score=188.72  Aligned_cols=113  Identities=23%  Similarity=0.499  Sum_probs=104.4

Q ss_pred             hhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCCh
Q psy4830         175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSK  254 (292)
Q Consensus       175 ~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~  254 (292)
                      .+..+++|+++|.|++||+.|.+.+.|..|+++|++++||.|++|++.|.+...|..|+++|+|++||.|++||++|.+.
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            45668899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhhhhcCC-----CCCcccCCCCCCccChHHHH
Q psy4830         255 SQFAVHLRTHHTV-----GANHVCNVCGRSFVRDSYLI  287 (292)
Q Consensus       255 ~~L~~H~~~hh~~-----~~~~~C~~C~~~f~~~~~l~  287 (292)
                      ++|..|+++||+.     .++|+|.+|++.|.......
T Consensus        92 ~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~h~  129 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYL  129 (133)
T ss_dssp             HHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCHHH
T ss_pred             HHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhccccc
Confidence            9999999999864     35799999999998765443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.1e-28  Score=173.98  Aligned_cols=110  Identities=29%  Similarity=0.631  Sum_probs=104.7

Q ss_pred             CCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhcc---ccCCcceeCCccccccCChhHH
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS---HVGDKPFGCTSCHLTFTSKSQF  257 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~---h~~~~~~~C~~C~~~f~~~~~L  257 (292)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+..   +.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4678999999999999999999999999999999999999999999999999985   6789999999999999999999


Q ss_pred             HHHhhhhcCCCCCcccCCCCCCccChHHHHhhhc
Q psy4830         258 AVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       258 ~~H~~~hh~~~~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      ..|+++| .++++|.|++|++.|.+...|.+|++
T Consensus        83 ~~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           83 RLHMVSH-TGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHHHH-SSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             HHHHHHc-CCCCCccCCCccchhCCHHHHHHHHH
Confidence            9999996 56889999999999999999999986

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.95  E-value=6.8e-29  Score=173.71  Aligned_cols=111  Identities=41%  Similarity=0.852  Sum_probs=105.8

Q ss_pred             CCCCCccccc--cccccCCchHHHHHHhhhcCCCCcccc--ccccccccchhhhhhhccccCCcceeCCccccccCChhH
Q psy4830         181 TGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACD--ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQ  256 (292)
Q Consensus       181 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  256 (292)
                      +++++|.|++  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4678999997  999999999999999999999999999  799999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCCCCCccc--CCCCCCccChHHHHhhhcC
Q psy4830         257 FAVHLRTHHTVGANHVC--NVCGRSFVRDSYLIRHQNK  292 (292)
Q Consensus       257 L~~H~~~hh~~~~~~~C--~~C~~~f~~~~~l~~H~rk  292 (292)
                      |..|+++| .++++|.|  ++|++.|.+.+.|.+|++.
T Consensus        82 l~~H~~~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           82 LKTHTRTH-TGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             HHHHHHHH-HTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             HHHHHHHh-cCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            99999996 56789999  8999999999999999974

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.94  E-value=1.7e-27  Score=166.53  Aligned_cols=113  Identities=36%  Similarity=0.856  Sum_probs=108.2

Q ss_pred             ccCCCCccCCc--chhhcCChhHHHHHHhhhcCCCCcccc--cchhhcCChhHHHHHHhhcCCCcceecccccccCCChh
Q psy4830           4 HSGNKPYHCTA--CDASFCRKPYLEIHMRTHTGERPFQCV--VCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQ   79 (292)
Q Consensus         4 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (292)
                      .+++++|.|++  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|++.|.+..+|.|++|++.|.+..
T Consensus         1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             CCSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            36789999997  999999999999999999999999999  79999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceec--CccccccCChHHHHHHHHHh
Q psy4830          80 NLEVHMRTHTGERPYQC--EVCNKRFSQKSSLNTHKRIH  116 (292)
Q Consensus        80 ~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  116 (292)
                      .|..|+++|+++++|.|  ++|++.|.+...|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=3.8e-28  Score=171.62  Aligned_cols=103  Identities=23%  Similarity=0.448  Sum_probs=64.4

Q ss_pred             cccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHH
Q psy4830           3 LHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLE   82 (292)
Q Consensus         3 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (292)
                      +|+|+++|.|++|++.|.+...|.+|+++|.+++||.|++|++.|.+...|..|+++|.++.+|.|++|++.|.+...|.
T Consensus        16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           16 IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             EETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             ecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHH
Confidence            45566666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHhcCCCC------ceecCccccccCC
Q psy4830          83 VHMRTHTGER------PYQCEVCNKRFSQ  105 (292)
Q Consensus        83 ~H~~~h~~~~------~~~C~~C~~~f~~  105 (292)
                      .|+++|++++      +|.|.+|++.|..
T Consensus        96 ~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           96 SHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             HHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            6666655443      3555555555543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=7e-27  Score=164.67  Aligned_cols=111  Identities=38%  Similarity=0.765  Sum_probs=106.4

Q ss_pred             cCCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhh---cCCCcceecccccccCCChhHH
Q psy4830           5 SGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRM---HIPYIQYYCDACDATFTTKQNL   81 (292)
Q Consensus         5 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l   81 (292)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.   +.+..+|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            6789999999999999999999999999999999999999999999999999985   5678899999999999999999


Q ss_pred             HHHHHhcCCCCceecCccccccCChHHHHHHHHH
Q psy4830          82 EVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRI  115 (292)
Q Consensus        82 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  115 (292)
                      ..|+++|+++++|.|++|++.|.+...|..|++.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence            9999999999999999999999999999999975

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.94  E-value=2.8e-27  Score=166.69  Aligned_cols=108  Identities=32%  Similarity=0.628  Sum_probs=100.2

Q ss_pred             CCCCcccc--ccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc--cccccCChhHH
Q psy4830         182 GERPFQCA--VCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFTSKSQF  257 (292)
Q Consensus       182 ~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L  257 (292)
                      ++++|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|+++|+++++|.|++  |++.|.+...|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789999  8999999999999999999 8899999999999999999999999999999999986  99999999999


Q ss_pred             HHHhhhhcCCCCCcccC--CCCCCccChHHHHhhhc
Q psy4830         258 AVHLRTHHTVGANHVCN--VCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       258 ~~H~~~hh~~~~~~~C~--~C~~~f~~~~~l~~H~r  291 (292)
                      ..|+++| .++++|.|+  .|++.|.+.++|..|++
T Consensus        81 ~~H~~~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           81 RTHVRIH-TGDRPYVCPFDGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             HHHHHHH-HCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             HHHHHHh-CCCCceECCCCCCCCccCCHHHHHHHHH
Confidence            9999997 567899996  49999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.94  E-value=9.4e-27  Score=170.51  Aligned_cols=130  Identities=28%  Similarity=0.444  Sum_probs=97.1

Q ss_pred             CCCCCccCCCchhhhchhHHHhhhhhhhhcccCCCCCCCcchhhhhcchhhhhhhcccCCCCCCccccccccccCCchHH
Q psy4830         122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSL  201 (292)
Q Consensus       122 ~~~~~~~C~~C~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L  201 (292)
                      .++.+|.|..|++.|.+...|..|....+....+.                      ......+|.|++|++.|.+...|
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~----------------------~~~~~~~~~C~~C~~~f~~~~~l   78 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ----------------------NNHVCYWEECPREGKSFKAKYKL   78 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTC----------------------SSCCCCBTTCTTSSCCCSSHHHH
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCccc----------------------CCccccccCCCCcccccCCHHHH
Confidence            45667888888888888888876654422111000                      00011237888888888888888


Q ss_pred             HHHHhhhcCCCCccccc--cccccccchhhhhhhccccCCcceeCCc--cccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         202 NTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       202 ~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      ..|+++|.++++|.|++  |++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+++| .++++|.|+
T Consensus        79 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~k~~~c~  154 (155)
T 2rpc_A           79 VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH-TSDKSGPSS  154 (155)
T ss_dssp             HHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTT-TSCCCSCSC
T ss_pred             HHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHh-cCCCCCCCC
Confidence            88888888888888887  8888888888888888888888888886  888888888888888875 567788875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.93  E-value=3.2e-26  Score=167.63  Aligned_cols=123  Identities=32%  Similarity=0.581  Sum_probs=113.6

Q ss_pred             cccCCCCccCCcchhhcCChhHHHHHHhh-hcCCCC--------cccccchhhcCChhHHHHHHhhcCCCcceeccc--c
Q psy4830           3 LHSGNKPYHCTACDASFCRKPYLEIHMRT-HTGERP--------FQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDA--C   71 (292)
Q Consensus         3 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C   71 (292)
                      +..++.+|.|..|++.|.+...|..|+++ |.++.+        |.|++|++.|.+...|..|+++|.+..+|.|++  |
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            34567889999999999999999999998 766654        899999999999999999999999999999998  9


Q ss_pred             cccCCChhHHHHHHHhcCCCCceecCc--cccccCChHHHHHHHHHhhcccCCCCCCccCC
Q psy4830          72 DATFTTKQNLEVHMRTHTGERPYQCEV--CNKRFSQKSSLNTHKRIHINYLHTEDKPYHCT  130 (292)
Q Consensus        72 ~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~C~  130 (292)
                      ++.|.+...|..|+++|+++++|.|++  |++.|.+...|..|+++|     .+++||.|+
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-----~~~k~~~c~  154 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH-----TSDKSGPSS  154 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTT-----TSCCCSCSC
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHh-----cCCCCCCCC
Confidence            999999999999999999999999997  999999999999999875     488999886

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=3.6e-26  Score=160.96  Aligned_cols=111  Identities=34%  Similarity=0.692  Sum_probs=103.7

Q ss_pred             CCCCccCC--cchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceeccc--ccccCCChhHH
Q psy4830           6 GNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDA--CDATFTTKQNL   81 (292)
Q Consensus         6 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   81 (292)
                      ++++|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|++.|.+..+|.|++  |++.|.+...|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            46799999  8999999999999999999 8899999999999999999999999999999999986  99999999999


Q ss_pred             HHHHHhcCCCCceecC--ccccccCChHHHHHHHHHhh
Q psy4830          82 EVHMRTHTGERPYQCE--VCNKRFSQKSSLNTHKRIHI  117 (292)
Q Consensus        82 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~  117 (292)
                      ..|+++|.++++|.|+  .|++.|.+.+.|..|+++|.
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~  118 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA  118 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHc
Confidence            9999999999999996  59999999999999999975

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=4.8e-24  Score=142.98  Aligned_cols=89  Identities=38%  Similarity=0.725  Sum_probs=84.2

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHH
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAV  259 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  259 (292)
                      +.++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhcCCC
Q psy4830         260 HLRTHHTVG  268 (292)
Q Consensus       260 H~~~hh~~~  268 (292)
                      |+++|++..
T Consensus        83 H~~~h~~~~   91 (96)
T 2dmd_A           83 HLRSHTGDS   91 (96)
T ss_dssp             HHTTCCSCC
T ss_pred             HHHHhcCCC
Confidence            999986543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.90  E-value=3.4e-24  Score=148.67  Aligned_cols=97  Identities=21%  Similarity=0.293  Sum_probs=89.8

Q ss_pred             hhhhhhcccCCCCCCccccccccccCCchHHHHHHhh--hcCCCCcc-cccccccc--ccchhhhhhhccccCCcceeCC
Q psy4830         171 FSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRV--HTGERPYA-CDICDKRF--AVKSYVTSHRWSHVGDKPFGCT  245 (292)
Q Consensus       171 ~~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~~~-C~~C~k~f--~~~~~L~~H~~~h~~~~~~~C~  245 (292)
                      ..+..|+++|+++++|.|++|++.|.+...|..|+++  |.+++++. |++|++.|  .....|..|+++|++++||.|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            3457899999999999999999999999999999999  77777655 99999999  9999999999999999999999


Q ss_pred             ccccccCChhHHHHHhhhhcCC
Q psy4830         246 SCHLTFTSKSQFAVHLRTHHTV  267 (292)
Q Consensus       246 ~C~~~f~~~~~L~~H~~~hh~~  267 (292)
                      +|++.|.+..+|..|+++||..
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTT
T ss_pred             CCCCccCCHHHHHHHHHHhCCc
Confidence            9999999999999999998754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=4e-24  Score=146.25  Aligned_cols=97  Identities=19%  Similarity=0.328  Sum_probs=90.2

Q ss_pred             hhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCCh
Q psy4830         175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSK  254 (292)
Q Consensus       175 ~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~  254 (292)
                      .++++|.++++|.|++|++.|.+...|..|+++|.  ++|.|++|++.|.....|..|+. |++++||.|++|++.|.+.
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            35678899999999999999999999999999994  69999999999999999999995 9999999999999999999


Q ss_pred             hHHHHHhhhhcCCCCCcccC
Q psy4830         255 SQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       255 ~~L~~H~~~hh~~~~~~~C~  274 (292)
                      .+|..|++..|+++++|.|.
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            99999998667888998774

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.90  E-value=1.6e-23  Score=143.11  Aligned_cols=93  Identities=35%  Similarity=0.738  Sum_probs=87.1

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHH
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAV  259 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  259 (292)
                      ...+++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            34678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhcCCCCCccc
Q psy4830         260 HLRTHHTVGANHVC  273 (292)
Q Consensus       260 H~~~hh~~~~~~~C  273 (292)
                      |+++| .++++|.+
T Consensus        92 H~~~H-~~~~~~~~  104 (106)
T 2ee8_A           92 HKTLH-MQTSSPTA  104 (106)
T ss_dssp             HHHHT-TSCCCCCC
T ss_pred             HHHHh-CCCCCCcC
Confidence            99997 56677754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.89  E-value=1.2e-23  Score=136.78  Aligned_cols=81  Identities=40%  Similarity=0.860  Sum_probs=76.8

Q ss_pred             CccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ||.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+.++|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             c
Q psy4830         265 H  265 (292)
Q Consensus       265 h  265 (292)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.88  E-value=2.2e-23  Score=138.03  Aligned_cols=85  Identities=38%  Similarity=0.847  Sum_probs=79.6

Q ss_pred             CCCCcccc--ccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHH
Q psy4830         182 GERPFQCA--VCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAV  259 (292)
Q Consensus       182 ~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  259 (292)
                      ++++|.|+  .|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            36789998  5999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhcC
Q psy4830         260 HLRTHHT  266 (292)
Q Consensus       260 H~~~hh~  266 (292)
                      |+++|++
T Consensus        81 H~~~H~~   87 (90)
T 1a1h_A           81 HTKIHLR   87 (90)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhcc
Confidence            9999743

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=4.1e-23  Score=138.09  Aligned_cols=88  Identities=35%  Similarity=0.722  Sum_probs=80.8

Q ss_pred             CCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCC--cceeCCccccccCChhHHH
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGD--KPFGCTSCHLTFTSKSQFA  258 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~--~~~~C~~C~~~f~~~~~L~  258 (292)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+++  ++|.|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999987  8999999999999999999


Q ss_pred             HHhhhhcCCC
Q psy4830         259 VHLRTHHTVG  268 (292)
Q Consensus       259 ~H~~~hh~~~  268 (292)
                      .|++..|+++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9997555543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.88  E-value=4.9e-23  Score=141.59  Aligned_cols=87  Identities=33%  Similarity=0.744  Sum_probs=84.0

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHH
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFA  258 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  258 (292)
                      .|+++++|.| .|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5788999999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhcC
Q psy4830         259 VHLRTHHT  266 (292)
Q Consensus       259 ~H~~~hh~  266 (292)
                      .|+++|+.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99999864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=8.8e-24  Score=146.57  Aligned_cols=94  Identities=19%  Similarity=0.205  Sum_probs=87.1

Q ss_pred             CchHHHHHHhhhcCCCCccccccccccccchhhhhhhcc--ccCCccee-CCcccccc--CChhHHHHHhhhhcCCCCCc
Q psy4830         197 QKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWS--HVGDKPFG-CTSCHLTF--TSKSQFAVHLRTHHTVGANH  271 (292)
Q Consensus       197 ~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~hh~~~~~~  271 (292)
                      +.+.|..|+++|++++||.|++|++.|.+...|..|+++  |.+++++. |++|++.|  .+...|..|+++| .++++|
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H-~~~~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE-DAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSC-CCCSSC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhcc-CCCcce
Confidence            456789999999999999999999999999999999998  88787765 99999999  9999999999995 678999


Q ss_pred             ccCCCCCCccChHHHHhhhc
Q psy4830         272 VCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       272 ~C~~C~~~f~~~~~l~~H~r  291 (292)
                      .|++|++.|.+.+.|.+|++
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~  101 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMI  101 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHH
T ss_pred             ECCCCCCccCCHHHHHHHHH
Confidence            99999999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.86  E-value=7.2e-22  Score=134.79  Aligned_cols=90  Identities=31%  Similarity=0.622  Sum_probs=61.3

Q ss_pred             CCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHHHHH
Q psy4830           6 GNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHM   85 (292)
Q Consensus         6 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   85 (292)
                      ++++|.|.+|++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.|.+..+|.|++|++.|.+...|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            45567777777777777777777777776666777777766666666666666666666666666666666666666666


Q ss_pred             HhcCCCCcee
Q psy4830          86 RTHTGERPYQ   95 (292)
Q Consensus        86 ~~h~~~~~~~   95 (292)
                      ++|.++++|.
T Consensus        94 ~~H~~~~~~~  103 (106)
T 2ee8_A           94 TLHMQTSSPT  103 (106)
T ss_dssp             HHTTSCCCCC
T ss_pred             HHhCCCCCCc
Confidence            6666666554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=7.9e-22  Score=132.08  Aligned_cols=89  Identities=35%  Similarity=0.703  Sum_probs=57.4

Q ss_pred             ccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHHH
Q psy4830           4 HSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEV   83 (292)
Q Consensus         4 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (292)
                      +.++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|.+..+|.|++|++.|.+...|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            44566666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             HHHhcCCCC
Q psy4830          84 HMRTHTGER   92 (292)
Q Consensus        84 H~~~h~~~~   92 (292)
                      |+++|++++
T Consensus        83 H~~~h~~~~   91 (96)
T 2dmd_A           83 HLRSHTGDS   91 (96)
T ss_dssp             HHTTCCSCC
T ss_pred             HHHHhcCCC
Confidence            666665554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=5.7e-22  Score=132.51  Aligned_cols=83  Identities=35%  Similarity=0.753  Sum_probs=78.3

Q ss_pred             cCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCC-CCCcccCCCCCCccChHHHH
Q psy4830         209 TGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTV-GANHVCNVCGRSFVRDSYLI  287 (292)
Q Consensus       209 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~-~~~~~C~~C~~~f~~~~~l~  287 (292)
                      .++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+.. +++|.|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            47889999999999999999999999999999999999999999999999999998654 38999999999999999999


Q ss_pred             hhhc
Q psy4830         288 RHQN  291 (292)
Q Consensus       288 ~H~r  291 (292)
                      .|++
T Consensus        83 ~H~~   86 (95)
T 2yt9_A           83 GHIK   86 (95)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9985

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=8.2e-22  Score=134.68  Aligned_cols=92  Identities=20%  Similarity=0.307  Sum_probs=48.1

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHH
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNL   81 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (292)
                      ++|+++++|.|++|++.|.+...|..|+++|.  ++|.|++|++.|.....|..|++ |.++.+|.|++|++.|.....|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            34555555555555555555555555555552  34555555555555555555553 4444555555555555555555


Q ss_pred             HHHHH-hcCCCCceec
Q psy4830          82 EVHMR-THTGERPYQC   96 (292)
Q Consensus        82 ~~H~~-~h~~~~~~~C   96 (292)
                      ..|++ +|.++++|.+
T Consensus        86 ~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCC
Confidence            55553 4444444443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.85  E-value=9.4e-22  Score=130.07  Aligned_cols=87  Identities=34%  Similarity=0.783  Sum_probs=55.3

Q ss_pred             CCCCccCC--cchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHHH
Q psy4830           6 GNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEV   83 (292)
Q Consensus         6 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (292)
                      |++||.|+  .|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|.+..+|.|++|++.|.+...|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35667776  4777777777777777777666666666666666666666666666666666666666666666666666


Q ss_pred             HHHhcCCCC
Q psy4830          84 HMRTHTGER   92 (292)
Q Consensus        84 H~~~h~~~~   92 (292)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            666665543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.84  E-value=8.9e-22  Score=117.84  Aligned_cols=57  Identities=40%  Similarity=0.740  Sum_probs=35.9

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCC
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      |+||.|++||++|...+.|..|+++|++++||.|++||+.|...+.|..|+++|+|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            456666666666666666666666666666666666666666666666666666654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=1.1e-21  Score=134.90  Aligned_cols=83  Identities=31%  Similarity=0.640  Sum_probs=79.6

Q ss_pred             hhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccChHHH
Q psy4830         207 VHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYL  286 (292)
Q Consensus       207 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l  286 (292)
                      .|+++++|.| +|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++| .++++|.|++|++.|.+...|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH-TGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT-CCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHc-CCCCCeeCCCCcchhcCHHHH
Confidence            5789999999 99999999999999999999999999999999999999999999996 567899999999999999999


Q ss_pred             Hhhhc
Q psy4830         287 IRHQN  291 (292)
Q Consensus       287 ~~H~r  291 (292)
                      .+||+
T Consensus        82 ~~H~~   86 (110)
T 2csh_A           82 HRHVT   86 (110)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.84  E-value=1.3e-21  Score=129.14  Aligned_cols=82  Identities=38%  Similarity=0.833  Sum_probs=70.3

Q ss_pred             CCCccccc--cccccCCchHHHHHHhhhcCCCCcccc--ccccccccchhhhhhhccccCCcceeCCccccccCChhHHH
Q psy4830         183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACD--ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFA  258 (292)
Q Consensus       183 ~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  258 (292)
                      ..+|.|++  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+..+|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            35688888  888888888888888888888888886  58888888888888888888888888888888888888888


Q ss_pred             HHhhhh
Q psy4830         259 VHLRTH  264 (292)
Q Consensus       259 ~H~~~h  264 (292)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            888875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.83  E-value=2e-22  Score=132.60  Aligned_cols=83  Identities=30%  Similarity=0.585  Sum_probs=72.1

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhh
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      ++||.|++|++.|.+.+.|..|+++|.+++||.|++|++.|.....|..|+++|++ .+|.|+.|++.|.+..+|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46788999999999999999999889888889999999999999999999888875 78889999999999999999988


Q ss_pred             hhcC
Q psy4830         263 THHT  266 (292)
Q Consensus       263 ~hh~  266 (292)
                      .+|.
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=2.7e-21  Score=125.50  Aligned_cols=81  Identities=36%  Similarity=0.700  Sum_probs=44.2

Q ss_pred             CccCCcchhhcCChhHHHHHHhhhcCCCCcccccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHHHHHHhc
Q psy4830           9 PYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTH   88 (292)
Q Consensus         9 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   88 (292)
                      ||.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|++.|.++.+|.|++|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            45566666666666666666655555555555555555555555555555555444555555555555555555555444


Q ss_pred             C
Q psy4830          89 T   89 (292)
Q Consensus        89 ~   89 (292)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.83  E-value=4.2e-21  Score=129.52  Aligned_cols=84  Identities=40%  Similarity=0.822  Sum_probs=79.0

Q ss_pred             CCCCccccc--cccccCCchHHHHHHhhhcCCCCcccc--ccccccccchhhhhhhccccCCcceeCCccccccCChhHH
Q psy4830         182 GERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACD--ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQF  257 (292)
Q Consensus       182 ~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L  257 (292)
                      .+++|.|++  |++.|.+...|..|+++|.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            457899997  999999999999999999999999996  6999999999999999999999999999999999999999


Q ss_pred             HHHhhhhc
Q psy4830         258 AVHLRTHH  265 (292)
Q Consensus       258 ~~H~~~hh  265 (292)
                      ..|+++|.
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999973

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.82  E-value=3.7e-21  Score=115.12  Aligned_cols=58  Identities=33%  Similarity=0.721  Sum_probs=54.3

Q ss_pred             CCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCC
Q psy4830         210 GERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVG  268 (292)
Q Consensus       210 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~  268 (292)
                      .|+||+|++||+.|...+.|..|+++|+|++||.|++||++|.+.++|..|+++| +++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H-tge   58 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH-QNK   58 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG-SCC
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc-CCC
Confidence            3799999999999999999999999999999999999999999999999999996 544

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.82  E-value=2.4e-22  Score=132.23  Aligned_cols=80  Identities=23%  Similarity=0.483  Sum_probs=76.4

Q ss_pred             CCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccChHHHHhhh
Q psy4830         211 ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       211 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      ++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++||.  .+|.|+.|++.|.+...|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHH
Confidence            57999999999999999999999999999999999999999999999999999873  7899999999999999999998


Q ss_pred             cC
Q psy4830         291 NK  292 (292)
Q Consensus       291 rk  292 (292)
                      ++
T Consensus        79 ~~   80 (88)
T 1llm_C           79 AR   80 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.81  E-value=1.6e-20  Score=122.65  Aligned_cols=78  Identities=31%  Similarity=0.683  Sum_probs=64.8

Q ss_pred             Cccc--cccccccCCchHHHHHHhhhcCCCCccccc--cccccccchhhhhhhccccCCcceeCCc---cccccCChhHH
Q psy4830         185 PFQC--AVCSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTS---CHLTFTSKSQF  257 (292)
Q Consensus       185 ~~~C--~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~---C~~~f~~~~~L  257 (292)
                      ||.|  +.|++.|.+.+.|..|+++|.+++||.|++  |++.|.+...|..|+++|++   |.|+.   |++.|.+..+|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5778  778888888888888888888888888877  88888888888888888877   88888   88888888888


Q ss_pred             HHHhhhhc
Q psy4830         258 AVHLRTHH  265 (292)
Q Consensus       258 ~~H~~~hh  265 (292)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88888764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.80  E-value=3.5e-20  Score=122.19  Aligned_cols=81  Identities=30%  Similarity=0.653  Sum_probs=76.3

Q ss_pred             CCCccccc--cccccccchhhhhhhccccCCcceeCC--ccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccChHHH
Q psy4830         211 ERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCT--SCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYL  286 (292)
Q Consensus       211 ~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l  286 (292)
                      .++|.|++  |++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+++| .++++|.|++|++.|.+.++|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH-TGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHH-HCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHc-CCCCCccCCCCCcccCCHHHH
Confidence            56899999  999999999999999999999999997  5999999999999999986 567899999999999999999


Q ss_pred             HhhhcC
Q psy4830         287 IRHQNK  292 (292)
Q Consensus       287 ~~H~rk  292 (292)
                      ..|++.
T Consensus        82 ~~H~~~   87 (89)
T 2wbs_A           82 ALHMKR   87 (89)
T ss_dssp             HHHGGG
T ss_pred             HHHHHh
Confidence            999973

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=4.6e-20  Score=118.66  Aligned_cols=70  Identities=24%  Similarity=0.552  Sum_probs=44.3

Q ss_pred             CCCCccccc--cccccCCchHHHHHHh-hhcCCCCccccc--cccccccchhhhhhhccccCCcceeCCcccccc
Q psy4830         182 GERPFQCAV--CSKRFTQKSSLNTHKR-VHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTF  251 (292)
Q Consensus       182 ~~~~~~C~~--C~k~f~~~~~L~~H~~-~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  251 (292)
                      ++++|.|+.  |++.|.+...|..|++ +|.++++|.|++  |++.|.+...|..|+++|++++||.|++|+++|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            455666665  6666666666666666 566666666666  666666666666666666666666666666655

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=5e-20  Score=120.60  Aligned_cols=79  Identities=32%  Similarity=0.482  Sum_probs=40.1

Q ss_pred             HHHHHhhhcCCCCccccccccccccchhhhhhhccccCC----cceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         201 LNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGD----KPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       201 L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |.+|+++|.+++||.|++|++.|.....|..|+++|+++    ++|.|++|++.|.+...|..|+++| .++.++.|+.|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h-~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC-AGPDGVEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHC-CCCCSCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHc-cCCCCcccCCC
Confidence            334444555555555555555555555555554444333    4555555555555555555555554 33445555555


Q ss_pred             CCCc
Q psy4830         277 GRSF  280 (292)
Q Consensus       277 ~~~f  280 (292)
                      +.+|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            5543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=9.6e-20  Score=119.21  Aligned_cols=79  Identities=27%  Similarity=0.483  Sum_probs=74.2

Q ss_pred             hhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCC----CCccccccccccccchhhhhhhccccCCcceeCCccc
Q psy4830         173 HQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE----RPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCH  248 (292)
Q Consensus       173 ~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~----~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~  248 (292)
                      +..|+++|+++++|.|++|++.|.....|..|+++|+++    ++|.|++|++.|.....|..|+++|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            457899999999999999999999999999999987765    7999999999999999999999999999999999999


Q ss_pred             ccc
Q psy4830         249 LTF  251 (292)
Q Consensus       249 ~~f  251 (292)
                      ..|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            876

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.77  E-value=6.8e-19  Score=118.58  Aligned_cols=80  Identities=38%  Similarity=0.740  Sum_probs=42.3

Q ss_pred             Cccccc--chhhcCChhHHHHHHhhcCCCcceecc--cccccCCChhHHHHHHHhcCCCCceecCccccccCChHHHHHH
Q psy4830          37 PFQCVV--CLKRFSQKSALNTHKRMHIPYIQYYCD--ACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTH  112 (292)
Q Consensus        37 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  112 (292)
                      +|.|.+  |++.|.+...|..|++.|.+..+|.|+  .|++.|.+...|..|+++|.++++|.|++|++.|.....|..|
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   94 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH   94 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHH
Confidence            444443  444444444444444444444445553  3555555555555555555555555555555555555555555


Q ss_pred             HHHh
Q psy4830         113 KRIH  116 (292)
Q Consensus       113 ~~~h  116 (292)
                      +++|
T Consensus        95 ~~~H   98 (100)
T 2ebt_A           95 MKRH   98 (100)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            5554

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.77  E-value=1.8e-19  Score=117.66  Aligned_cols=75  Identities=24%  Similarity=0.530  Sum_probs=72.0

Q ss_pred             Cccc--cccccccccchhhhhhhccccCCcceeCCc--cccccCChhHHHHHhhhhcCCCCCcccCC---CCCCccChHH
Q psy4830         213 PYAC--DICDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFTSKSQFAVHLRTHHTVGANHVCNV---CGRSFVRDSY  285 (292)
Q Consensus       213 ~~~C--~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~hh~~~~~~~C~~---C~~~f~~~~~  285 (292)
                      ||.|  ++|++.|.+...|..|+++|++++||.|++  |+++|.+...|..|+++|++    |.|++   |++.|.+.+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHH
Confidence            6899  999999999999999999999999999998  99999999999999999854    99999   9999999999


Q ss_pred             HHhhhc
Q psy4830         286 LIRHQN  291 (292)
Q Consensus       286 l~~H~r  291 (292)
                      |..|++
T Consensus        77 l~~H~~   82 (85)
T 2j7j_A           77 YLKHVA   82 (85)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999986

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.8e-19  Score=114.36  Aligned_cols=72  Identities=26%  Similarity=0.649  Sum_probs=67.3

Q ss_pred             cCCCCccccc--cccccccchhhhhhhc-cccCCcceeCCc--cccccCChhHHHHHhhhhcCCCCCcccCCCCCCcc
Q psy4830         209 TGERPYACDI--CDKRFAVKSYVTSHRW-SHVGDKPFGCTS--CHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFV  281 (292)
Q Consensus       209 ~~~~~~~C~~--C~k~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~  281 (292)
                      +++++|.|+.  |++.|.+...|..|++ +|.++++|.|++  |++.|.+..+|..|+++| .++++|.|++|+++|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH-SDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHH-HTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHh-CCCCCeeCCCCCCCCC
Confidence            4678999997  9999999999999999 799999999999  999999999999999996 5689999999999984

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.9e-19  Score=113.62  Aligned_cols=67  Identities=37%  Similarity=0.780  Sum_probs=54.2

Q ss_pred             ccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeC
Q psy4830         178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC  244 (292)
Q Consensus       178 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  244 (292)
                      ..+.++++|.|++|++.|.....|..|+++|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3455677888888888888888888888888888888888888888888888888888888888876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=4.8e-19  Score=118.08  Aligned_cols=70  Identities=19%  Similarity=0.304  Sum_probs=60.8

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHh-hh---cCCCCccccccccccccchhhhhh-hccccCCcceeCCccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKR-VH---TGERPYACDICDKRFAVKSYVTSH-RWSHVGDKPFGCTSCH  248 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~h---~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~~~~~~C~~C~  248 (292)
                      ...+++||.|+.||+.|...+.|..|++ +|   .+++||.|++||+.|...+.|..| +++|+|++||.|.++.
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            4568889999999999999999999987 58   568899999999999999999999 7899999999998754

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.3e-19  Score=114.66  Aligned_cols=70  Identities=33%  Similarity=0.695  Sum_probs=53.4

Q ss_pred             HHHHHhhhcCCCCccccccccccccchhhhhhhc-cccCC-cceeCCccccccCChhHHHHHhhhhcCCCCC
Q psy4830         201 LNTHKRVHTGERPYACDICDKRFAVKSYVTSHRW-SHVGD-KPFGCTSCHLTFTSKSQFAVHLRTHHTVGAN  270 (292)
Q Consensus       201 L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~  270 (292)
                      |.+|+++|++++||.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.+...|..|++++|..+.|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4567777777777777777777777777777775 56654 7888888888888888888888887776655

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.74  E-value=1.1e-19  Score=128.55  Aligned_cols=80  Identities=18%  Similarity=0.286  Sum_probs=61.8

Q ss_pred             CCccccccccccC------CchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHH
Q psy4830         184 RPFQCAVCSKRFT------QKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQF  257 (292)
Q Consensus       184 ~~~~C~~C~k~f~------~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L  257 (292)
                      +.+.|++|++.|.      ....|..|+ .|++++||.|++||+.|.....|..|+++|  ++||.|++|++.|.+..+|
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHH
Confidence            4567777766665      455566665 577788888888888888888888888887  7788888888888888888


Q ss_pred             HHHhhhhcC
Q psy4830         258 AVHLRTHHT  266 (292)
Q Consensus       258 ~~H~~~hh~  266 (292)
                      ..|+++||+
T Consensus       117 ~~H~~~h~~  125 (129)
T 2wbt_A          117 LDHVCKKHN  125 (129)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHHCC
Confidence            888888764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.74  E-value=1.2e-19  Score=128.18  Aligned_cols=108  Identities=19%  Similarity=0.322  Sum_probs=86.7

Q ss_pred             ccCCCCCCccccccccccCCchHHHHHHhh---hcCCCCccccccccccc------cchhhhhhhccccCCcceeCCccc
Q psy4830         178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRV---HTGERPYACDICDKRFA------VKSYVTSHRWSHVGDKPFGCTSCH  248 (292)
Q Consensus       178 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~---h~~~~~~~C~~C~k~f~------~~~~L~~H~~~h~~~~~~~C~~C~  248 (292)
                      .++.+.++|.|...+...  ...+..+.+.   ...++++.|++|++.|.      ....|..|+ .|++++||.|++||
T Consensus         5 ~~~~~~k~~~~~~k~~~~--~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~   81 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFI--HVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCL   81 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEE--ECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTC
T ss_pred             hhcccccccccccCCeee--eecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCC
Confidence            356788999888765433  2234444332   33456788999988776      566677777 69999999999999


Q ss_pred             cccCChhHHHHHhhhhcCCCCCcccCCCCCCccChHHHHhhhc
Q psy4830         249 LTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       249 ~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      +.|.+..+|..|+++|   +++|.|++|++.|.+.++|.+|++
T Consensus        82 k~f~~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~  121 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVC  121 (129)
T ss_dssp             CEESSHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHH
T ss_pred             cccCCHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHH
Confidence            9999999999999996   689999999999999999999986

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=2.4e-18  Score=108.96  Aligned_cols=64  Identities=38%  Similarity=0.899  Sum_probs=53.5

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcce
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF  242 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  242 (292)
                      .+.++++|.|+.|++.|.+...|..|+++|.++++|+|++|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4566788888888888888888888888888888888888888888888888888888888775

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=3.9e-18  Score=108.90  Aligned_cols=67  Identities=33%  Similarity=0.638  Sum_probs=62.7

Q ss_pred             hhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCccc
Q psy4830         206 RVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVC  273 (292)
Q Consensus       206 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C  273 (292)
                      ..+.++++|.|++|++.|.....|..|+++|++++||.|++|++.|.....|..|+++| .++++|+|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H-~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH-TGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGS-CCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHh-CCCCCCCC
Confidence            45678899999999999999999999999999999999999999999999999999996 67889987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=3.5e-18  Score=113.46  Aligned_cols=77  Identities=13%  Similarity=0.162  Sum_probs=68.1

Q ss_pred             cccCCchHHHHHHhhhcCCCCcccccccccc-ccchhhhhhhccccCCcceeCCccccccCChhHHHHH-hhhhcCCCCC
Q psy4830         193 KRFTQKSSLNTHKRVHTGERPYACDICDKRF-AVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVH-LRTHHTVGAN  270 (292)
Q Consensus       193 k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f-~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~hh~~~~~  270 (292)
                      ..|...+.|..|++.|.++++|.|++|++.| .+...|..|+++| +++||.|++|++.|.....|..| +++| ++...
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H-~~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH-NSLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT-CCCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc-CCCCC
Confidence            4678888999999999999999999999999 9999999999999 99999999999999999999999 7665 54433


Q ss_pred             c
Q psy4830         271 H  271 (292)
Q Consensus       271 ~  271 (292)
                      |
T Consensus        92 ~   92 (96)
T 2ctd_A           92 G   92 (96)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=8e-19  Score=117.52  Aligned_cols=77  Identities=14%  Similarity=0.208  Sum_probs=58.1

Q ss_pred             ccCCchHHHHHHhhhcCCCCccccccccccc-cchhhhhhhccccC-CcceeCCccccccCChhHHHHHhhhhcCCCCCc
Q psy4830         194 RFTQKSSLNTHKRVHTGERPYACDICDKRFA-VKSYVTSHRWSHVG-DKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANH  271 (292)
Q Consensus       194 ~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~-~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~  271 (292)
                      .+.....+..|+++|.++++|.|++|++.|. ....|..|+++|++ +++|.|++|++.|.+...|..|+++||. ++++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~-~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS-AKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC-SCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC-CCCC
Confidence            3455566777888888888888888888888 88888888888877 7788888888888888888888877653 4443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.72  E-value=3.5e-18  Score=109.90  Aligned_cols=57  Identities=25%  Similarity=0.429  Sum_probs=27.3

Q ss_pred             CCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         210 GERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       210 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      +.++|.|++||+.|.+...|..|+++|++++||.|++|+++|.+..+|.+|++..|+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            334444444444444444444444444444455555555555555555555433333

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=3.2e-18  Score=114.09  Aligned_cols=70  Identities=21%  Similarity=0.337  Sum_probs=63.5

Q ss_pred             hcCCCCccccccccccccchhhhhhhc-cc---cCCcceeCCccccccCChhHHHHH-hhhhcCCCCCcccCCCCC
Q psy4830         208 HTGERPYACDICDKRFAVKSYVTSHRW-SH---VGDKPFGCTSCHLTFTSKSQFAVH-LRTHHTVGANHVCNVCGR  278 (292)
Q Consensus       208 h~~~~~~~C~~C~k~f~~~~~L~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~hh~~~~~~~C~~C~~  278 (292)
                      -.|++||.|++||+.|..+..|..|++ +|   .+++||.|++||++|.+.+.|..| +++ |++++||.|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~-Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY-HPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT-STTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh-cCCCCCeeCCcccC
Confidence            468899999999999999999999997 59   678999999999999999999999 677 58899999998654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=5.2e-18  Score=106.77  Aligned_cols=60  Identities=37%  Similarity=0.811  Sum_probs=34.7

Q ss_pred             hhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhc
Q psy4830         206 RVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       206 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      ++|.+++||.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+++|+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            345555555555555555555555555555555555666666666666666666665543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=8.2e-18  Score=107.38  Aligned_cols=64  Identities=31%  Similarity=0.550  Sum_probs=59.3

Q ss_pred             hhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCC-CCcccCCCCCCccChHHHHhhhc
Q psy4830         228 YVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVG-ANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       228 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~-~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      .|..|+++|++++||.|++|++.|.+..+|..|++.+|..+ ++|.|++|++.|.+...|.+|++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHH
Confidence            46789999999999999999999999999999998666664 89999999999999999999986

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=2e-18  Score=115.56  Aligned_cols=74  Identities=19%  Similarity=0.313  Sum_probs=68.6

Q ss_pred             hhhhhcccCCCCCCccccccccccC-CchHHHHHHhhhcC-CCCccccccccccccchhhhhhhccccCCcceeCC
Q psy4830         172 SHQVHMRTHTGERPFQCAVCSKRFT-QKSSLNTHKRVHTG-ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT  245 (292)
Q Consensus       172 ~~~~h~~~~~~~~~~~C~~C~k~f~-~~~~L~~H~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  245 (292)
                      .+..|+++|.++++|.|++|++.|. ....|..|+++|++ +++|.|++|++.|.+...|..|+++|++++|+.-.
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            3457889999999999999999999 99999999999999 99999999999999999999999999999986543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=8.7e-18  Score=105.16  Aligned_cols=61  Identities=28%  Similarity=0.591  Sum_probs=31.6

Q ss_pred             CCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcc
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKP  241 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  241 (292)
                      +++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.....|..|+++|++++|
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            4445555555555555555555555555555555555555555555555555555554443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=9.2e-18  Score=105.63  Aligned_cols=65  Identities=40%  Similarity=0.790  Sum_probs=61.5

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK  240 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  240 (292)
                      +.++|.++++|.|++|++.|.....|..|+++|.+++||.|++|++.|.....|..|+++|+++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            45678899999999999999999999999999999999999999999999999999999998865

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.69  E-value=2.1e-17  Score=104.62  Aligned_cols=64  Identities=30%  Similarity=0.687  Sum_probs=59.2

Q ss_pred             hhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCc
Q psy4830         207 VHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANH  271 (292)
Q Consensus       207 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~  271 (292)
                      .+.++++|+|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++| .+++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH-SGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHH-CCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhc-CCCCCC
Confidence            4678899999999999999999999999999999999999999999999999999996 566665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.69  E-value=1.9e-17  Score=106.43  Aligned_cols=64  Identities=20%  Similarity=0.442  Sum_probs=58.6

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhh-ccccCCc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHR-WSHVGDK  240 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~~~  240 (292)
                      +..+...++|.|++||+.|.+...|.+|+++|++++||.|++|++.|.....|..|+ ++|++|.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            445667889999999999999999999999999999999999999999999999996 6788764

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=2.9e-19  Score=113.05  Aligned_cols=69  Identities=23%  Similarity=0.438  Sum_probs=45.6

Q ss_pred             hhhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCcc
Q psy4830         172 SHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSC  247 (292)
Q Consensus       172 ~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  247 (292)
                      .+..|+++|.++++|.|++||+.|.+.+.|..       +++|.|++||+.|.....|..|+++|++++||.|++|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34556666666666777777776666666655       5566666666666666666666666666666666665

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=1.6e-18  Score=109.60  Aligned_cols=72  Identities=15%  Similarity=0.260  Sum_probs=66.8

Q ss_pred             CchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         197 QKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       197 ~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      +.+.|..|+++|.+++||.|++||+.|.....|..       +++|.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNE-SGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCC-CCCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhh-cCCCCCCCCCC
Confidence            45678999999999999999999999999999987       78999999999999999999999996 67889999998

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.68  E-value=1.6e-17  Score=99.52  Aligned_cols=55  Identities=31%  Similarity=0.696  Sum_probs=36.9

Q ss_pred             CCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhc
Q psy4830         211 ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       211 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      ++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+..+|..|+++||
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4566777777777777777777777777777777777777777777777777664

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.2e-17  Score=103.30  Aligned_cols=60  Identities=27%  Similarity=0.568  Sum_probs=38.5

Q ss_pred             hhhcCCCCccccccccccccchhhhhhhcc-c-cCCcceeCCccccccCChhHHHHHhhhhc
Q psy4830         206 RVHTGERPYACDICDKRFAVKSYVTSHRWS-H-VGDKPFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       206 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      ++|.+++||.|++|++.|.+...|..|+++ | .+++||.|++|++.|.+.++|..|++++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            345566666666666666666666666665 5 35666666666666666666666666665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=4e-17  Score=102.07  Aligned_cols=60  Identities=23%  Similarity=0.525  Sum_probs=56.8

Q ss_pred             hhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         207 VHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       207 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      .|.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999999999999999999999999865

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=4.6e-17  Score=104.18  Aligned_cols=65  Identities=22%  Similarity=0.355  Sum_probs=42.7

Q ss_pred             hcCCCCccccccccccccchhhhhhhccccC---CcceeCCccccccCChhHHHHHhhhhcCCCCCcc
Q psy4830         208 HTGERPYACDICDKRFAVKSYVTSHRWSHVG---DKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHV  272 (292)
Q Consensus       208 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~  272 (292)
                      |++++||+|++|++.|.....|..|+++|++   +++|.|++|++.|.+...|..|++.+|.++.+..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            5566666666666666666666666666664   6677777777777777777777766666555543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.65  E-value=4.6e-17  Score=97.43  Aligned_cols=57  Identities=37%  Similarity=0.673  Sum_probs=51.0

Q ss_pred             CCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccC
Q psy4830         182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG  238 (292)
Q Consensus       182 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  238 (292)
                      ++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999999999999999999998864

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=7.3e-17  Score=99.65  Aligned_cols=59  Identities=24%  Similarity=0.508  Sum_probs=54.8

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhhhc-CCCCCcccCCCCCCccChHHHHhhhc
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH-TVGANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh-~~~~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      +++|++++||.|++|++.|.+..+|..|++++| .++++|.|++|++.|.+.+.|..|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHH
Confidence            357899999999999999999999999999966 68899999999999999999999986

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.64  E-value=1.4e-16  Score=95.29  Aligned_cols=53  Identities=26%  Similarity=0.688  Sum_probs=31.5

Q ss_pred             CccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhc
Q psy4830         213 PYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      ||.|++|++.|.+...|..|+++|++++||.|++|++.|.+..+|..|+++|+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhc
Confidence            45555566666655556666555555566666666666666666666665543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.64  E-value=1.2e-16  Score=95.64  Aligned_cols=56  Identities=36%  Similarity=0.646  Sum_probs=54.3

Q ss_pred             CccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCc
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK  240 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  240 (292)
                      ||.|++|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999999999999999999999999999999876

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.9e-16  Score=104.13  Aligned_cols=73  Identities=14%  Similarity=0.243  Sum_probs=42.3

Q ss_pred             hcCChhHHHHHHhhhcCCCCcccccchhhc-CChhHHHHHHhhcCCCcceecccccccCCChhHHHHH-HHhcCCC
Q psy4830          18 SFCRKPYLEIHMRTHTGERPFQCVVCLKRF-SQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVH-MRTHTGE   91 (292)
Q Consensus        18 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   91 (292)
                      .|.....|..|++.+.++++|.|++|++.| .+...|..|+++| ++++|.|++|++.|.....|..| +++|+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            445555556666666555666666666666 5556666665555 55555555555555555555555 5555443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.7e-16  Score=94.46  Aligned_cols=55  Identities=29%  Similarity=0.722  Sum_probs=35.5

Q ss_pred             CCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      +||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            3566666666666666666666666666666666666666666666666543333

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=3.7e-16  Score=99.89  Aligned_cols=67  Identities=33%  Similarity=0.530  Sum_probs=60.4

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcC---CCCccccccccccccchhhhhhh-ccccCCcceeCC
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTG---ERPYACDICDKRFAVKSYVTSHR-WSHVGDKPFGCT  245 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~  245 (292)
                      +|+++++|.|++|++.|.....|..|+++|.+   +++|.|++|++.|.....|..|+ ..|.++++..-.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            36789999999999999999999999999996   89999999999999999999999 677777776543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=7e-16  Score=93.24  Aligned_cols=56  Identities=36%  Similarity=0.882  Sum_probs=52.9

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhh-ccccCC
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHR-WSHVGD  239 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~~  239 (292)
                      +||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47999999999999999999999999999999999999999999999996 688765

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=1.5e-15  Score=100.97  Aligned_cols=62  Identities=24%  Similarity=0.333  Sum_probs=46.6

Q ss_pred             CCccccccccccCCchHHHHHHhh-hcCCCC--------ccccccccccccchhhhhhhccccCCcceeCC
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRV-HTGERP--------YACDICDKRFAVKSYVTSHRWSHVGDKPFGCT  245 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  245 (292)
                      ..|.|+.|++.|.+...|..|+++ |.++++        |.|++|++.|.....|..|+++|++++||.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            457788888888888888888887 887776        66666666666666666666666666666664

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.3e-15  Score=94.80  Aligned_cols=58  Identities=34%  Similarity=0.848  Sum_probs=37.5

Q ss_pred             cCCCCCCcccc--ccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccc
Q psy4830         179 THTGERPFQCA--VCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH  236 (292)
Q Consensus       179 ~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h  236 (292)
                      ++.++++|.|+  .|++.|.....|..|+++|.++++|.|++||+.|.....|..|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            45566666665  36666666666666666666666666666666666666666666655

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.4e-15  Score=95.83  Aligned_cols=58  Identities=41%  Similarity=0.832  Sum_probs=39.9

Q ss_pred             hhcCCCCcccc--ccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         207 VHTGERPYACD--ICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       207 ~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +|.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            35566677775  47777777777777777777777777777777777777777776664

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.51  E-value=3.9e-15  Score=84.63  Aligned_cols=43  Identities=21%  Similarity=0.398  Sum_probs=17.4

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| +++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH-VGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGG-SSSSCSCSSC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHc-CCCCCcCCCC
Confidence            333444444444444444444444444444432 3333444443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=4e-15  Score=84.59  Aligned_cols=43  Identities=30%  Similarity=0.414  Sum_probs=17.3

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| +++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGT-SCCCCCSCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhc-CCCCCCCCCC
Confidence            333444444444444444444444444444332 2333444443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.49  E-value=3.9e-15  Score=84.62  Aligned_cols=44  Identities=39%  Similarity=0.519  Sum_probs=21.3

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| +++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH-TGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGS-SSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            444444555555555555555555555554442 34444555444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=4.4e-15  Score=84.42  Aligned_cols=31  Identities=39%  Similarity=0.703  Sum_probs=12.4

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +++|++++||.|++|++.|.+.++|..|+++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRI   34 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHHGG
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHHHH
Confidence            3333334444444444444444444444333

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=7e-15  Score=90.54  Aligned_cols=56  Identities=21%  Similarity=0.456  Sum_probs=29.6

Q ss_pred             CCCCccccccccccCCchHHHHHHhhhcCCCCcccc-ccccccccchhhhhhhccccCC
Q psy4830         182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD-ICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       182 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~-~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      +++||.|+.|++.|. .+.|..|+++ ++++||.|+ +||+.|..++.|..|+++|...
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            344555555555555 5555555555 555555555 5555555555555555554433

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=3.8e-15  Score=84.65  Aligned_cols=44  Identities=25%  Similarity=0.462  Sum_probs=21.4

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH-SGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGG-SSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHh-cCCCCCCCCCC
Confidence            444445555555555555555555555554443 33444555444

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=4.4e-15  Score=84.40  Aligned_cols=44  Identities=20%  Similarity=0.292  Sum_probs=18.8

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH-SGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHC-CSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhc-CCCCCCCCCCC
Confidence            344444444444444444444444444444442 33344444443

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=1.9e-14  Score=95.65  Aligned_cols=62  Identities=23%  Similarity=0.331  Sum_probs=57.5

Q ss_pred             CCccccccccccccchhhhhhhcc-ccCCcc--------eeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWS-HVGDKP--------FGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      ..|.|++|++.|.....|..|+++ |.++++        |.|++|++.|.+...|..|+++| +++++|.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH-TGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH-HTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc-CCCCCCCCC
Confidence            357899999999999999999998 999888        99999999999999999999996 678999996

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=5.1e-15  Score=84.14  Aligned_cols=44  Identities=32%  Similarity=0.422  Sum_probs=17.9

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH-TGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTT-TTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            333444444444444444444444444444432 33334444433

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.49  E-value=3.8e-15  Score=84.66  Aligned_cols=44  Identities=25%  Similarity=0.424  Sum_probs=19.6

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.+.|..|+++| +++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHH-SSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            444444444444444444444444444444443 33344444443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=5.6e-15  Score=83.98  Aligned_cols=28  Identities=39%  Similarity=0.829  Sum_probs=10.3

Q ss_pred             cccCCcceeCCccccccCChhHHHHHhh
Q psy4830         235 SHVGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       235 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      +|++++||.|++|++.|.+..+|..|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQR   33 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHT
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHH
Confidence            3333333333333333333333333333

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.49  E-value=4.3e-15  Score=84.43  Aligned_cols=44  Identities=25%  Similarity=0.369  Sum_probs=19.8

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH-TGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGG-GCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhc-CCCCCCCCCCC
Confidence            444444444444444444444444444444442 33344444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=4.8e-15  Score=84.26  Aligned_cols=44  Identities=25%  Similarity=0.423  Sum_probs=19.5

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGG-SSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            444444444444444444444444444444442 33344444443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=8.4e-15  Score=83.21  Aligned_cols=30  Identities=23%  Similarity=0.541  Sum_probs=11.6

Q ss_pred             ccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       234 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      ++|++++||.|++|++.|.+..+|..|+++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRV   34 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHh
Confidence            333333333333333333333333333333

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=5e-15  Score=84.18  Aligned_cols=44  Identities=30%  Similarity=0.485  Sum_probs=18.9

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.+.|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH-TGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHH-SCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhc-CCCCCCCCCCC
Confidence            344444444444444444444444444444442 33344444443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=6e-15  Score=83.83  Aligned_cols=44  Identities=32%  Similarity=0.413  Sum_probs=21.1

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGT-SCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            444444444555555555555555555554443 33444444444

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=4.2e-15  Score=84.48  Aligned_cols=44  Identities=27%  Similarity=0.255  Sum_probs=22.0

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTT-SCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            444555555555555555555555555555443 34445555544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=5e-15  Score=84.16  Aligned_cols=44  Identities=27%  Similarity=0.414  Sum_probs=18.9

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|+++|.+.++|..|+++| +++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH-TAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHT-TCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            344444444444444444444444444444442 33344444443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=8e-15  Score=83.30  Aligned_cols=29  Identities=34%  Similarity=0.692  Sum_probs=11.2

Q ss_pred             ccccCCcceeCCccccccCChhHHHHHhh
Q psy4830         234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       234 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      ++|++++||.|++|++.|.+..+|..|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRR   33 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHT
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHH
Confidence            33333333333333333333333333333

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=4.9e-15  Score=84.20  Aligned_cols=44  Identities=27%  Similarity=0.372  Sum_probs=20.6

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTT-CCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            444444444444444444444444444444442 33444444444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.48  E-value=6.5e-15  Score=83.69  Aligned_cols=42  Identities=43%  Similarity=0.871  Sum_probs=17.5

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      +++|+++++|.|++|++.|.+.+.|.+|+++|++++||+|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            333444444444444444444444444444444444444433

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=6.3e-15  Score=83.76  Aligned_cols=44  Identities=25%  Similarity=0.343  Sum_probs=20.6

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+...|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGG-CCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhc-CCCCCCCCCCC
Confidence            444444444444444444444444444444443 33444444444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=6.4e-15  Score=83.71  Aligned_cols=44  Identities=34%  Similarity=0.454  Sum_probs=20.9

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH-TGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGG-SCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            444444444444444444444444444444443 33444444444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=9.1e-15  Score=83.05  Aligned_cols=31  Identities=45%  Similarity=0.912  Sum_probs=12.6

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +++|++++||.|++|++.|.+.++|.+|+++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRT   34 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHHTT
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHHHH
Confidence            3334444444444444444444444444433

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=6.6e-15  Score=83.66  Aligned_cols=44  Identities=27%  Similarity=0.399  Sum_probs=21.1

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.+.|..|+++| +++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTT-CCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhc-CCCCCCCCCCC
Confidence            444444444555555555555555555554442 33444544444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=5.5e-15  Score=84.02  Aligned_cols=44  Identities=23%  Similarity=0.272  Sum_probs=20.5

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|+++|.+.++|..|+++| +++++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH-MGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTT-CCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            444444444444444444444444444444442 33444444444

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=8.3e-15  Score=83.24  Aligned_cols=44  Identities=23%  Similarity=0.345  Sum_probs=20.8

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGG-TTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            444444444444444444444444444444443 33444444444

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.4e-14  Score=80.67  Aligned_cols=44  Identities=39%  Similarity=0.730  Sum_probs=25.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.47  E-value=3.4e-14  Score=80.66  Aligned_cols=44  Identities=41%  Similarity=0.760  Sum_probs=30.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666667777777777777777777777777777777777665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.47  E-value=9.7e-15  Score=82.97  Aligned_cols=44  Identities=25%  Similarity=0.363  Sum_probs=20.5

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+...|..|+++| .++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH-SGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGG-TSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHh-CCCCCCCCCCC
Confidence            444444444444444444444444444444442 33444444444

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=9.9e-15  Score=89.86  Aligned_cols=55  Identities=24%  Similarity=0.600  Sum_probs=49.0

Q ss_pred             hcCCCCccccccccccccchhhhhhhccccCCcceeCC-ccccccCChhHHHHHhhhh
Q psy4830         208 HTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT-SCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       208 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~h  264 (292)
                      ..+++||.|++|++.|. ...|..|+++ ++++||.|+ .||++|..++.|..|+++|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            34678899999999999 9999999988 899999999 9999999999999999886

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.47  E-value=3.5e-14  Score=80.59  Aligned_cols=44  Identities=34%  Similarity=0.600  Sum_probs=24.9

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            44555555555555555555555555555555555555555554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.47  E-value=4.1e-14  Score=80.31  Aligned_cols=45  Identities=36%  Similarity=0.627  Sum_probs=43.3

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCcc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSC  247 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  247 (292)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.8e-14  Score=80.97  Aligned_cols=45  Identities=29%  Similarity=0.485  Sum_probs=33.3

Q ss_pred             hhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       175 ~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      .|+++|+++++|.|++||+.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            356677777777777777777777777777777777777777766

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2.7e-14  Score=81.08  Aligned_cols=45  Identities=27%  Similarity=0.473  Sum_probs=35.4

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++||++|.+.++|..|+++| +++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH-FREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHH-HSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHH-cCCCCCCCCCC
Confidence            5777888888888888888888888888888775 56677888776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.4e-14  Score=80.65  Aligned_cols=44  Identities=41%  Similarity=0.717  Sum_probs=32.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|.+.+.|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.6e-14  Score=80.54  Aligned_cols=44  Identities=36%  Similarity=0.828  Sum_probs=28.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.6e-14  Score=80.58  Aligned_cols=44  Identities=41%  Similarity=0.745  Sum_probs=26.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555566666666666666666666666666666666666555

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.8e-14  Score=80.42  Aligned_cols=44  Identities=41%  Similarity=0.739  Sum_probs=29.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.1e-14  Score=80.32  Aligned_cols=45  Identities=24%  Similarity=0.373  Sum_probs=34.5

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHH-SCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            4777777778888888888888888888887775 56677888776

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.5e-14  Score=79.75  Aligned_cols=44  Identities=34%  Similarity=0.642  Sum_probs=30.3

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++||+.|.+.+.|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34566666777777777777777777777777777777777665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.46  E-value=1.1e-15  Score=92.71  Aligned_cols=53  Identities=17%  Similarity=0.328  Sum_probs=24.4

Q ss_pred             hhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccChHHH
Q psy4830         230 TSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYL  286 (292)
Q Consensus       230 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l  286 (292)
                      ..|+++|++++||.|+.||++|.....|.   ++ |+++++|.|++||+.|...+++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~-H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LF-DPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HE-ETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hh-cCCCCCEECCCCCCccccCccc
Confidence            34444444444455555554444444443   22 2344445555555544444433

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.46  E-value=3.3e-14  Score=80.71  Aligned_cols=44  Identities=36%  Similarity=0.645  Sum_probs=26.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555666666666666666666666666666666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.46  E-value=3.8e-14  Score=80.46  Aligned_cols=44  Identities=34%  Similarity=0.699  Sum_probs=28.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=9e-15  Score=83.09  Aligned_cols=43  Identities=28%  Similarity=0.463  Sum_probs=19.8

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTT-TTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            444444444444444444444444444444442 3344444443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.6e-14  Score=80.09  Aligned_cols=44  Identities=41%  Similarity=0.688  Sum_probs=29.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++||+.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.6e-14  Score=80.57  Aligned_cols=45  Identities=38%  Similarity=0.643  Sum_probs=32.5

Q ss_pred             hhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       175 ~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      .|+++|+++++|.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777765

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.9e-14  Score=80.41  Aligned_cols=44  Identities=32%  Similarity=0.639  Sum_probs=26.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|.+.+.|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=9.6e-15  Score=82.95  Aligned_cols=44  Identities=39%  Similarity=0.724  Sum_probs=20.8

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|.+.+.|.+|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.4e-14  Score=79.80  Aligned_cols=44  Identities=27%  Similarity=0.591  Sum_probs=27.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.2e-14  Score=80.25  Aligned_cols=45  Identities=29%  Similarity=0.410  Sum_probs=32.8

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      +|+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH-TKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHT-SCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            4677777777777777777777777777777774 56677777766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.6e-14  Score=80.56  Aligned_cols=44  Identities=36%  Similarity=0.702  Sum_probs=31.5

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++||+.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            56666777777777777777777777777777777777777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-14  Score=80.48  Aligned_cols=44  Identities=39%  Similarity=0.729  Sum_probs=27.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.46  E-value=1.1e-14  Score=82.73  Aligned_cols=44  Identities=27%  Similarity=0.432  Sum_probs=18.5

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH-TREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGG-CCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            334444444444444444444444444444442 33344444443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=9.4e-15  Score=83.02  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=20.6

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH-TGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTS-CSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhh-CCCCCCCCCCC
Confidence            444444444444444444444444444444442 33444444444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.3e-14  Score=80.20  Aligned_cols=45  Identities=29%  Similarity=0.424  Sum_probs=34.1

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      +|+++|++++||.|++|+++|.+.++|..|+++| .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH-AGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHH-TTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHc-CCCCCCCCCCC
Confidence            4677777777788888888888877888887775 56677777776

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.5e-14  Score=80.13  Aligned_cols=44  Identities=39%  Similarity=0.675  Sum_probs=26.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555666666666666666666666666666566665554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-14  Score=80.49  Aligned_cols=44  Identities=41%  Similarity=0.748  Sum_probs=32.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-14  Score=80.50  Aligned_cols=44  Identities=36%  Similarity=0.696  Sum_probs=26.9

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666555

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.5e-14  Score=80.15  Aligned_cols=45  Identities=36%  Similarity=0.487  Sum_probs=31.5

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+.++|..|+++| +++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTT-SSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            4666777777777777777777777777777764 55667777766

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4e-14  Score=80.37  Aligned_cols=44  Identities=41%  Similarity=0.846  Sum_probs=27.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.8e-14  Score=80.44  Aligned_cols=45  Identities=42%  Similarity=0.781  Sum_probs=33.2

Q ss_pred             hhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       175 ~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777766

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.7e-14  Score=80.48  Aligned_cols=44  Identities=36%  Similarity=0.633  Sum_probs=27.5

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++||+.|.+.+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.6e-14  Score=80.54  Aligned_cols=44  Identities=43%  Similarity=0.760  Sum_probs=32.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777765

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.9e-14  Score=80.38  Aligned_cols=44  Identities=36%  Similarity=0.671  Sum_probs=28.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666654

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=5.1e-14  Score=79.92  Aligned_cols=44  Identities=41%  Similarity=0.784  Sum_probs=26.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|.+|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555566666666666666666666666666666666666554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.9e-14  Score=80.40  Aligned_cols=44  Identities=39%  Similarity=0.746  Sum_probs=27.3

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4e-14  Score=80.33  Aligned_cols=45  Identities=27%  Similarity=0.313  Sum_probs=33.4

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      +|+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHH-HCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHc-CCCCCCCCCCC
Confidence            4677777777777777777777777777777775 55677777776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.6e-14  Score=80.10  Aligned_cols=45  Identities=31%  Similarity=0.445  Sum_probs=34.6

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+.++|..|+++| +++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHH-SSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHH-CCCCCCCCCCC
Confidence            4777777788888888888888888888887775 56677888776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.2e-14  Score=82.63  Aligned_cols=44  Identities=30%  Similarity=0.396  Sum_probs=21.5

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| +++++|.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH-SGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHS-CCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHh-CCCCCCCCCCC
Confidence            444445555555555555555555555554443 34444555444

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=5.1e-14  Score=79.07  Aligned_cols=44  Identities=34%  Similarity=0.549  Sum_probs=32.8

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|+++|.+.++|..|+++| .++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH-AEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHH-TSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            566777777777777777777777777777774 56677777776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.8e-14  Score=80.02  Aligned_cols=44  Identities=36%  Similarity=0.767  Sum_probs=31.8

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.5e-14  Score=79.75  Aligned_cols=44  Identities=36%  Similarity=0.674  Sum_probs=27.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|.+.+.|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666555

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=5.1e-14  Score=79.91  Aligned_cols=44  Identities=39%  Similarity=0.690  Sum_probs=28.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666655

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.8e-14  Score=80.04  Aligned_cols=44  Identities=41%  Similarity=0.782  Sum_probs=24.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.2e-14  Score=80.26  Aligned_cols=44  Identities=32%  Similarity=0.526  Sum_probs=29.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++||+.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.1e-14  Score=79.90  Aligned_cols=44  Identities=34%  Similarity=0.684  Sum_probs=26.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555666666666666666666666666665556655554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.7e-14  Score=79.68  Aligned_cols=45  Identities=38%  Similarity=0.640  Sum_probs=43.1

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCcc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSC  247 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  247 (292)
                      .|+++|.+++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.1e-14  Score=80.32  Aligned_cols=45  Identities=29%  Similarity=0.418  Sum_probs=34.0

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      +|+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHH-HCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhc-CCCCCCCCCCC
Confidence            4677777777788877888888877888887775 55677777776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.9e-14  Score=79.63  Aligned_cols=45  Identities=27%  Similarity=0.386  Sum_probs=34.0

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+...|..|+++| +++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH-TGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHH-TCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHc-CCCCCCCCCCC
Confidence            4677777777777877888887777787787775 56677777776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5e-14  Score=79.96  Aligned_cols=45  Identities=36%  Similarity=0.449  Sum_probs=32.9

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++||+.|.+.++|..|+++| +++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH-VDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHC-CSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            4677777777777777777777777777777774 56677777776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4e-14  Score=80.34  Aligned_cols=44  Identities=41%  Similarity=0.786  Sum_probs=22.9

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.45  E-value=5.7e-14  Score=79.72  Aligned_cols=44  Identities=39%  Similarity=0.697  Sum_probs=27.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|.+.+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666555

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.3e-14  Score=80.22  Aligned_cols=45  Identities=36%  Similarity=0.515  Sum_probs=32.8

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+.++|..|+++| +++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH-TGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHH-HSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhc-CCCCCCCCCCC
Confidence            4667777777777777777777777777777775 55677777776

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=4.9e-14  Score=79.97  Aligned_cols=44  Identities=32%  Similarity=0.518  Sum_probs=27.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666555

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.5e-14  Score=79.77  Aligned_cols=44  Identities=48%  Similarity=0.871  Sum_probs=24.8

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++||+.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.44  E-value=6.9e-14  Score=82.26  Aligned_cols=47  Identities=32%  Similarity=0.646  Sum_probs=34.2

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHh-hhcCCCCcccccccccccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKR-VHTGERPYACDICDKRFAV  225 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~C~k~f~~  225 (292)
                      .+.++++|.|++|++.|.....|.+|++ +|.+++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3556677777777777777777777775 7777777777777777764

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.5e-14  Score=81.67  Aligned_cols=44  Identities=25%  Similarity=0.372  Sum_probs=18.3

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhh-hhcCCCCCcccCCC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLR-THHTVGANHVCNVC  276 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~hh~~~~~~~C~~C  276 (292)
                      |+++|++++||.|++|++.|.+.++|..|++ +| +++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H-~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH-TGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTT-TTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhc-CCCCCCCCCCC
Confidence            3344444444444444444444444444444 32 33344444433

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.44  E-value=7.3e-14  Score=79.24  Aligned_cols=44  Identities=32%  Similarity=0.596  Sum_probs=29.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.6e-14  Score=79.73  Aligned_cols=44  Identities=41%  Similarity=0.759  Sum_probs=31.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=7e-14  Score=79.32  Aligned_cols=44  Identities=34%  Similarity=0.672  Sum_probs=29.3

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=5.9e-14  Score=79.64  Aligned_cols=44  Identities=39%  Similarity=0.751  Sum_probs=27.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=7.8e-14  Score=79.11  Aligned_cols=44  Identities=25%  Similarity=0.368  Sum_probs=30.5

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666777777777777777777777777777777777665

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.1e-14  Score=79.30  Aligned_cols=45  Identities=38%  Similarity=0.544  Sum_probs=34.2

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+.++|..|+++| .++++|.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHH-SSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHc-CCCCCCCCCCC
Confidence            4677777777888888888888888888887775 56677777776

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.43  E-value=5.1e-14  Score=88.32  Aligned_cols=57  Identities=37%  Similarity=0.824  Sum_probs=33.7

Q ss_pred             CCCCCCccccc--cccccCCchHHHHHHhhhcCCCCccccc--cccccccchhhhhhhccc
Q psy4830         180 HTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSH  236 (292)
Q Consensus       180 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h  236 (292)
                      ....++|.|+.  |++.|.....|..|+++|++++||.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34455666655  6666666666666666666666666643  666666666666555543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=8.1e-14  Score=79.05  Aligned_cols=44  Identities=32%  Similarity=0.662  Sum_probs=33.9

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56677777778888888888777778888777777777777776

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.43  E-value=1.3e-13  Score=81.00  Aligned_cols=48  Identities=27%  Similarity=0.431  Sum_probs=33.6

Q ss_pred             cccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccC
Q psy4830         235 SHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVR  282 (292)
Q Consensus       235 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~  282 (292)
                      .|.+++||.|++|++.|.+...|.+|++..|.++++|.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            456677777777777777777777777633466677777777777764

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.9e-14  Score=79.10  Aligned_cols=44  Identities=43%  Similarity=0.806  Sum_probs=26.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555666666666666666666666666666666666666543

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1e-13  Score=78.65  Aligned_cols=45  Identities=20%  Similarity=0.137  Sum_probs=33.2

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+.++|..|+++| +++++|+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLH-MGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHH-SCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            4667777777777777777777777777777774 56677777776

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=86.68  Aligned_cols=57  Identities=32%  Similarity=0.670  Sum_probs=53.1

Q ss_pred             hcCCCCccccc--cccccccchhhhhhhccccCCcceeCCc--cccccCChhHHHHHhhhh
Q psy4830         208 HTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDKPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       208 h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      ....++|.|++  |++.|.....|..|+++|++++||.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45678999999  9999999999999999999999999975  999999999999999874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.42  E-value=1.8e-14  Score=87.38  Aligned_cols=57  Identities=19%  Similarity=0.365  Sum_probs=51.9

Q ss_pred             HHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHH
Q psy4830         201 LNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVH  260 (292)
Q Consensus       201 L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  260 (292)
                      |..|+++|++++||.|++||+.|.....|.   ++|++++||.|++||+.|....++..+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            567899999999999999999999999887   789999999999999999988877654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.4e-13  Score=78.47  Aligned_cols=44  Identities=39%  Similarity=0.673  Sum_probs=28.3

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHh-hhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKR-VHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|++ +|++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4556666666666666666666666666666 6666666666655

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.3e-13  Score=78.22  Aligned_cols=45  Identities=24%  Similarity=0.371  Sum_probs=33.5

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH-TGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHH-HCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHH-cCCCCCCCCCC
Confidence            3667777777777777777777777777777775 55677777776

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=5.5e-14  Score=79.76  Aligned_cols=36  Identities=53%  Similarity=1.009  Sum_probs=13.1

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCcc
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA  215 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  215 (292)
                      |+++++|.|++|++.|...+.|..|+++|++++||.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            333333333333333333333333333333333333

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.7e-13  Score=77.72  Aligned_cols=44  Identities=39%  Similarity=0.733  Sum_probs=32.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=5.2e-14  Score=79.86  Aligned_cols=36  Identities=50%  Similarity=0.977  Sum_probs=13.2

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCcc
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA  215 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  215 (292)
                      |+++++|.|++|++.|...+.|..|+++|++++||.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            333333333333333333333333333333333333

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.1e-13  Score=77.32  Aligned_cols=45  Identities=33%  Similarity=0.468  Sum_probs=34.0

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVC  276 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C  276 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH-TGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHH-CCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHh-CCCCCCCCCCC
Confidence            4677777778888888888888888888887775 56677877765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.4e-14  Score=79.50  Aligned_cols=38  Identities=47%  Similarity=0.969  Sum_probs=14.3

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            6 SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.39  E-value=6.2e-14  Score=77.87  Aligned_cols=31  Identities=32%  Similarity=0.699  Sum_probs=13.3

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +++|++++||.|++|+++|.+.++|..|+++
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   32 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRT   32 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHh
Confidence            3344444444444444444444444444444

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.8e-14  Score=79.36  Aligned_cols=31  Identities=39%  Similarity=0.690  Sum_probs=12.3

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +++|++++||.|++|++.|.+..+|..|+++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2yth_A            4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQRV   34 (46)
T ss_dssp             CSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG
T ss_pred             ccCCCCCcCCCCCCCCcccCCHHHHHHHHHh
Confidence            3333333334444444444444444444333

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6e-14  Score=79.61  Aligned_cols=38  Identities=47%  Similarity=0.928  Sum_probs=14.7

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.1e-14  Score=79.90  Aligned_cols=42  Identities=26%  Similarity=0.436  Sum_probs=18.3

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTT-SCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            344444444444444444444444444444442 333444443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.39  E-value=3.6e-14  Score=83.51  Aligned_cols=50  Identities=16%  Similarity=0.218  Sum_probs=28.9

Q ss_pred             cccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCc
Q psy4830         221 KRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANH  271 (292)
Q Consensus       221 k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~  271 (292)
                      +.|.....|..|+++|++++||.|++||+.|.+.++|..|+++| +++++|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELR-HFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHH-TTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHh-ccCCCC
Confidence            44555555666666666666666666666666666666666554 344444

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=7.3e-14  Score=79.23  Aligned_cols=36  Identities=53%  Similarity=1.001  Sum_probs=13.3

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCcc
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA  215 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  215 (292)
                      |+++++|.|++|++.|...+.|..|+++|++++||.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            333333333333333333333333333333333333

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=9.6e-14  Score=78.74  Aligned_cols=39  Identities=49%  Similarity=0.906  Sum_probs=15.5

Q ss_pred             ccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       178 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      ++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            333333344444444444444444444433333333333

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=7.2e-14  Score=79.27  Aligned_cols=29  Identities=31%  Similarity=0.676  Sum_probs=10.9

Q ss_pred             ccccCCcceeCCccccccCChhHHHHHhh
Q psy4830         234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       234 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      ++|++++||.|++|++.|.+..+|..|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQV   33 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHT
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHH
Confidence            33333333333333333333333333333

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1e-13  Score=78.59  Aligned_cols=38  Identities=47%  Similarity=0.906  Sum_probs=14.8

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +|+++++|.|++|++.|.....|.+|+++|++++||.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            33333333333333333333333333333333333333

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=8.9e-14  Score=77.22  Aligned_cols=36  Identities=39%  Similarity=0.743  Sum_probs=13.8

Q ss_pred             hhcCCCCccccccccccccchhhhhhhccccCCcce
Q psy4830         207 VHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPF  242 (292)
Q Consensus       207 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  242 (292)
                      +|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            333333333333333333333333333333333333

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6.8e-14  Score=79.40  Aligned_cols=42  Identities=31%  Similarity=0.452  Sum_probs=19.1

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      |+++|++++||.|++|++.|.+.++|..|+++| +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH-TGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGT-SSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhc-CCCCCcCCC
Confidence            444444444444444444444444444444442 334444443

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=6.8e-14  Score=79.39  Aligned_cols=42  Identities=38%  Similarity=0.601  Sum_probs=19.2

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH-TGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTS-CSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh-CCCCCCCCC
Confidence            444444444444444444444444444444442 334444443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=9.2e-14  Score=78.01  Aligned_cols=36  Identities=44%  Similarity=0.743  Sum_probs=13.3

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCcc
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA  215 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  215 (292)
                      |+++++|.|++|++.|...+.|..|+++|++++||.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            333333333333333333333333333333333333

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.2e-13  Score=76.69  Aligned_cols=29  Identities=28%  Similarity=0.784  Sum_probs=11.2

Q ss_pred             cccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         235 SHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       235 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +|++++||.|++|+++|.+.++|..|+++
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   32 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQKM   32 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            33333333333333333333333333333

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1e-13  Score=78.65  Aligned_cols=42  Identities=24%  Similarity=0.423  Sum_probs=18.5

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      |+++|+++++|.|++|++.|.+..+|..|+++| .++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH-RGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGG-CSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHh-CCCCCCCCC
Confidence            444444444444444444444444444444442 333444443

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=7.6e-14  Score=79.18  Aligned_cols=42  Identities=29%  Similarity=0.473  Sum_probs=19.1

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| .++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH-TGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTT-SSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHc-CCCCCCCCC
Confidence            444444444444444444444444444444442 334444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.37  E-value=3.5e-13  Score=76.35  Aligned_cols=43  Identities=47%  Similarity=0.841  Sum_probs=32.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667777777777777777777777777777777777777763

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=8.5e-14  Score=78.96  Aligned_cols=40  Identities=45%  Similarity=0.821  Sum_probs=16.8

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3334444444444444444444444444444444444444

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3e-13  Score=76.66  Aligned_cols=43  Identities=33%  Similarity=0.573  Sum_probs=33.1

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      +++|.++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777778888888888888888888777777777777776

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.6e-13  Score=75.85  Aligned_cols=44  Identities=36%  Similarity=0.708  Sum_probs=41.9

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.5e-13  Score=76.36  Aligned_cols=43  Identities=44%  Similarity=0.808  Sum_probs=29.8

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4456666777777777777777777777777777777777665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.37  E-value=4.1e-13  Score=76.06  Aligned_cols=44  Identities=36%  Similarity=0.513  Sum_probs=33.2

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| +++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHH-TTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            4777777778888888888888888888887775 5667777764

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.3e-13  Score=75.97  Aligned_cols=44  Identities=41%  Similarity=0.725  Sum_probs=41.9

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            48889999999999999999999999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.1e-13  Score=77.63  Aligned_cols=32  Identities=31%  Similarity=0.655  Sum_probs=12.8

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      |+++|++++||.|++|+++|.+.++|..|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKT   34 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTT
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHH
Confidence            33333444444444444444444444444333

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=3.6e-13  Score=77.02  Aligned_cols=42  Identities=31%  Similarity=0.627  Sum_probs=31.0

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCcccccccc
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDK  221 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k  221 (292)
                      +.++++|.|++|++.|.....|..|+++|++++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            456677777777777777777777777777777777777764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.1e-13  Score=75.68  Aligned_cols=44  Identities=39%  Similarity=0.698  Sum_probs=42.0

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.2e-13  Score=75.62  Aligned_cols=42  Identities=52%  Similarity=0.948  Sum_probs=26.3

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=4.4e-13  Score=75.53  Aligned_cols=42  Identities=31%  Similarity=0.647  Sum_probs=30.4

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICD  220 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~  220 (292)
                      +|+++++|.|++|++.|...+.|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            456677777777777777777777777777777777777765

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.36  E-value=5.1e-13  Score=74.07  Aligned_cols=40  Identities=35%  Similarity=0.747  Sum_probs=23.4

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +++|+++++|.|++|++.|.+.+.|..|+++|++++||.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            4455555566666666666666666666666655555555

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=2.2e-13  Score=77.95  Aligned_cols=42  Identities=14%  Similarity=0.166  Sum_probs=23.5

Q ss_pred             ccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCC
Q psy4830         236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGR  278 (292)
Q Consensus       236 h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~  278 (292)
                      |.++++|.|++|++.|.+...|..|+++| .++++|.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSH-SGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGS-CSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhc-CCCCCccCCCCCC
Confidence            44555555555555555555555555553 4455555555553

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.5e-13  Score=75.91  Aligned_cols=43  Identities=47%  Similarity=0.854  Sum_probs=30.9

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5666777777777777777777777777777777777777753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.8e-13  Score=75.77  Aligned_cols=44  Identities=41%  Similarity=0.730  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            48889999999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.4e-13  Score=75.93  Aligned_cols=43  Identities=37%  Similarity=0.740  Sum_probs=31.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5666777777777777777777777777777777777777753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=77.91  Aligned_cols=31  Identities=32%  Similarity=0.612  Sum_probs=12.6

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +++|++++||.|++|++.|.+..+|..|+++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eoh_A            4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRV   34 (46)
T ss_dssp             CCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHH
Confidence            3334444444444444444444444444433

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.3e-13  Score=75.96  Aligned_cols=42  Identities=43%  Similarity=0.804  Sum_probs=26.1

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.5e-13  Score=75.54  Aligned_cols=44  Identities=34%  Similarity=0.645  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48889999999999999999999999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=1.7e-13  Score=77.31  Aligned_cols=42  Identities=29%  Similarity=0.659  Sum_probs=26.6

Q ss_pred             cccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCC
Q psy4830         235 SHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCG  277 (292)
Q Consensus       235 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~  277 (292)
                      +|++++||.|++|++.|.....|..|+++| .++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSH-DGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHH-SCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHc-cCCCCCCCcCCC
Confidence            456666666666666666666666666664 455666666664

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.4e-13  Score=75.57  Aligned_cols=44  Identities=34%  Similarity=0.511  Sum_probs=33.0

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH-TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHH-CCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            4777777777788888888888888888887775 5667777764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=4.7e-13  Score=75.83  Aligned_cols=43  Identities=44%  Similarity=0.778  Sum_probs=30.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5666677777777777777777777777777777777777653

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.4e-13  Score=78.12  Aligned_cols=26  Identities=46%  Similarity=1.036  Sum_probs=9.2

Q ss_pred             CCccccccccccCCchHHHHHHhhhc
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      ++|.|++|++.|...+.|..|+++|.
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq3_A           11 KPYECNQCGKAFSVRSSLTTHQAIHT   36 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHTTSC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHHhC
Confidence            33333333333333333333333333

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.6e-13  Score=75.50  Aligned_cols=44  Identities=30%  Similarity=0.498  Sum_probs=32.3

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH-SGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHH-CCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHc-CCCCCCCCCC
Confidence            4677777777777777777777777777777774 5667777764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.1e-13  Score=75.68  Aligned_cols=42  Identities=48%  Similarity=0.873  Sum_probs=26.9

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            455666666666666666666666666666666666666665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.8e-13  Score=75.44  Aligned_cols=44  Identities=36%  Similarity=0.713  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +|+++|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.1e-13  Score=77.71  Aligned_cols=41  Identities=29%  Similarity=0.557  Sum_probs=19.1

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCccc
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVC  273 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C  273 (292)
                      |+++|++++||.|++|++.|.+...|..|+++| .++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH-ARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHC-CCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhc-CCCCCCCC
Confidence            444444444444444444444444444444442 33444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=5.6e-13  Score=75.48  Aligned_cols=44  Identities=30%  Similarity=0.471  Sum_probs=32.0

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      .|+++|++++||.|++|++.|.+...|..|+++| +++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH-TGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHH-SSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            4677777777777777777777777777777775 5667777764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.8e-13  Score=73.55  Aligned_cols=40  Identities=28%  Similarity=0.635  Sum_probs=24.3

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +++|+++++|.|++|++.|.+.+.|..|+++|++++||+|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4455556666666666666666666666666666666655

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.5e-13  Score=76.95  Aligned_cols=38  Identities=47%  Similarity=1.013  Sum_probs=15.2

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            33333344444444444444444444444433333333

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.9e-13  Score=75.39  Aligned_cols=43  Identities=40%  Similarity=0.770  Sum_probs=41.2

Q ss_pred             HHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       204 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            7889999999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.3e-13  Score=75.27  Aligned_cols=44  Identities=32%  Similarity=0.618  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.1e-13  Score=75.67  Aligned_cols=42  Identities=45%  Similarity=0.834  Sum_probs=27.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|.+.+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666666666666666666666666666666666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.7e-13  Score=75.46  Aligned_cols=43  Identities=40%  Similarity=0.796  Sum_probs=32.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5667777777777777777777777777777777777777764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.4e-13  Score=75.26  Aligned_cols=42  Identities=43%  Similarity=0.812  Sum_probs=27.9

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            555666666666666666666666666666666666666665

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6e-13  Score=75.38  Aligned_cols=42  Identities=40%  Similarity=0.797  Sum_probs=25.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455556666666666666666666666666666666666654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.8e-13  Score=75.96  Aligned_cols=34  Identities=41%  Similarity=0.991  Sum_probs=12.5

Q ss_pred             CCCCCccccccccccCCchHHHHHHhhhcCCCCc
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPY  214 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  214 (292)
                      +++++|.|++|++.|...+.|..|+++|++++||
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            7 GGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            3333333333333333333333333333333333

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.7e-13  Score=75.47  Aligned_cols=42  Identities=43%  Similarity=0.878  Sum_probs=27.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666666666666666666666666666666666666665

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.7e-13  Score=77.70  Aligned_cols=42  Identities=26%  Similarity=0.349  Sum_probs=19.1

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCC-CCCcccC
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTV-GANHVCN  274 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~-~~~~~C~  274 (292)
                      |+++|++++||.|++|+++|.+..+|..|+++| .+ +++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIH-TRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTC-CSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHc-CCCCCCCCCC
Confidence            444444444444444444444444444444442 33 4444443

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-13  Score=78.53  Aligned_cols=42  Identities=36%  Similarity=0.686  Sum_probs=19.7

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444444444444444444444444444444444443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.5e-13  Score=75.22  Aligned_cols=42  Identities=40%  Similarity=0.670  Sum_probs=30.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566677777777777777777777777777777777777775

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.33  E-value=4.7e-13  Score=78.61  Aligned_cols=52  Identities=19%  Similarity=0.203  Sum_probs=49.4

Q ss_pred             ccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCccee
Q psy4830         192 SKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFG  243 (292)
Q Consensus       192 ~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  243 (292)
                      ++.|.....|..|+++|++++||.|++||+.|...+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            5789999999999999999999999999999999999999999999999874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.8e-13  Score=75.15  Aligned_cols=44  Identities=32%  Similarity=0.461  Sum_probs=31.9

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H-~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH-TGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHH-HSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhc-CCCCCCCCCC
Confidence            4667777777777777777777777777777775 4567777764

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=7.5e-13  Score=74.97  Aligned_cols=44  Identities=30%  Similarity=0.478  Sum_probs=32.2

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      +|+++|++++||.|++|++.|.+...|..|+++| +++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH-TQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHH-SSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHh-CCCCCCCCCC
Confidence            4677777777777777777777777777777775 5567777753

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=8.1e-13  Score=74.05  Aligned_cols=43  Identities=33%  Similarity=0.630  Sum_probs=41.1

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCC
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT  245 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  245 (292)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5889999999999999999999999999999999999999995

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=7.6e-13  Score=74.17  Aligned_cols=42  Identities=40%  Similarity=0.734  Sum_probs=28.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            555666666666666666666666666666666666666663

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=8.7e-13  Score=74.68  Aligned_cols=43  Identities=42%  Similarity=0.750  Sum_probs=31.7

Q ss_pred             hhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       175 ~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      .|+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3566677777777777777777777777777777777777775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7.4e-13  Score=74.98  Aligned_cols=44  Identities=32%  Similarity=0.583  Sum_probs=41.8

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +|+++|.+++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            48899999999999999999999999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7.9e-13  Score=74.10  Aligned_cols=41  Identities=32%  Similarity=0.702  Sum_probs=23.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            44555555555555555555555555555555555555555

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=9e-13  Score=73.85  Aligned_cols=42  Identities=14%  Similarity=0.401  Sum_probs=27.5

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            555666666666666666666666666666666666666663

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.4e-13  Score=73.78  Aligned_cols=43  Identities=37%  Similarity=0.636  Sum_probs=31.2

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH-TGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHT-TTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHh-CCCCCCCCC
Confidence            4677777777777777777777777777777774 556777764

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1e-12  Score=73.65  Aligned_cols=42  Identities=31%  Similarity=0.618  Sum_probs=28.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            556666666677777777777777777776666666666663

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=9e-13  Score=74.62  Aligned_cols=42  Identities=26%  Similarity=0.481  Sum_probs=27.2

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcC-CCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTG-ERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45566666666666666666666666666666666 6666665

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.1e-12  Score=74.24  Aligned_cols=42  Identities=43%  Similarity=0.779  Sum_probs=26.3

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.9e-13  Score=75.39  Aligned_cols=43  Identities=35%  Similarity=0.512  Sum_probs=39.2

Q ss_pred             CccccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccc
Q psy4830           1 MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVC   43 (292)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   43 (292)
                      +++|++++||.|++|++.|.....|.+|+++|.+++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5788999999999999999999999999999999999999887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=9.8e-13  Score=74.48  Aligned_cols=43  Identities=37%  Similarity=0.630  Sum_probs=38.1

Q ss_pred             CccccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCcccccc
Q psy4830           1 MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVC   43 (292)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   43 (292)
                      +++|++++||.|++|++.|.....|.+|+++|.+++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4678889999999999999999999999999999999999877

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.4e-12  Score=73.87  Aligned_cols=43  Identities=42%  Similarity=0.812  Sum_probs=40.8

Q ss_pred             HHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       204 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      |+++|++++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6788999999999999999999999999999999999999963

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=8.9e-13  Score=73.06  Aligned_cols=41  Identities=44%  Similarity=0.798  Sum_probs=39.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67889999999999999999999999999999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.31  E-value=2.6e-13  Score=75.31  Aligned_cols=31  Identities=35%  Similarity=0.685  Sum_probs=13.6

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +++|++++||.|++|++.|.+.++|..|+++
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~   33 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRS   33 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhh
Confidence            3344444444444444444444444444444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.8e-13  Score=75.97  Aligned_cols=31  Identities=26%  Similarity=0.586  Sum_probs=13.3

Q ss_pred             hccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         233 RWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       233 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +++|++++||.|++|+++|.+..+|..|+++
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   33 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLI   33 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHH
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHH
Confidence            3344444444444444444444444444443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.2e-12  Score=74.13  Aligned_cols=43  Identities=33%  Similarity=0.539  Sum_probs=31.9

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      +|+++|++++||.|++|++.|.+...|..|+++| .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH-TGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHH-TCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHc-CCCCCCCCC
Confidence            4677777777777777777777777777777775 566777775

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1.4e-12  Score=73.10  Aligned_cols=43  Identities=23%  Similarity=0.412  Sum_probs=30.0

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H-~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTH-AAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGG-CCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHc-CCCCCcCCC
Confidence            4666777777777777777777777777777764 556677664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.2e-12  Score=74.15  Aligned_cols=44  Identities=43%  Similarity=0.796  Sum_probs=41.7

Q ss_pred             HHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         203 THKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       203 ~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999999973

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.1e-13  Score=76.48  Aligned_cols=41  Identities=22%  Similarity=0.362  Sum_probs=17.7

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCccc
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVC  273 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C  273 (292)
                      |+++|++++||.|++|++.|.+..+|..|+++| +++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH-TRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHH-CCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHh-CCCCCCCC
Confidence            344444444444444444444444444444442 33344443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.3e-12  Score=72.31  Aligned_cols=41  Identities=34%  Similarity=0.652  Sum_probs=39.5

Q ss_pred             HHhhhcCCCCccccccccccccchhhhhhhccccCCcceeC
Q psy4830         204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC  244 (292)
Q Consensus       204 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  244 (292)
                      |+++|.+++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999999988

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.9e-13  Score=74.64  Aligned_cols=43  Identities=35%  Similarity=0.565  Sum_probs=32.6

Q ss_pred             hhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         175 VHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       175 ~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      .|+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3666777777777777777777777777777777777777775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.8e-13  Score=75.40  Aligned_cols=40  Identities=25%  Similarity=0.424  Sum_probs=18.2

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      +++|.++++|.|++|++.|...+.|..|+++|++++||+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            3344444444444444444444444444444444444444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.2e-12  Score=72.45  Aligned_cols=41  Identities=34%  Similarity=0.736  Sum_probs=29.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45566777777777777777777777777777777777765

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.29  E-value=1.7e-12  Score=71.85  Aligned_cols=41  Identities=34%  Similarity=0.648  Sum_probs=27.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            44556666667777777777777777777766666666665

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.1e-12  Score=72.27  Aligned_cols=42  Identities=19%  Similarity=0.302  Sum_probs=40.2

Q ss_pred             HHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCC
Q psy4830         204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCT  245 (292)
Q Consensus       204 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~  245 (292)
                      |+++|.+++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            678899999999999999999999999999999999999995

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.7e-12  Score=72.62  Aligned_cols=42  Identities=38%  Similarity=0.654  Sum_probs=31.9

Q ss_pred             cccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         177 MRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       177 ~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      +++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            456677777888888888888888888877777777777763

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.5e-12  Score=72.90  Aligned_cols=41  Identities=24%  Similarity=0.490  Sum_probs=26.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            45566666666666666666666666666666666666665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.6e-13  Score=75.71  Aligned_cols=29  Identities=38%  Similarity=0.847  Sum_probs=11.7

Q ss_pred             cccCCcceeCC--ccccccCChhHHHHHhhh
Q psy4830         235 SHVGDKPFGCT--SCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       235 ~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~  263 (292)
                      +|++++||.|.  .|++.|.+...|..|+++
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   36 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRS   36 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTT
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            33334444443  344444444444444433

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.8e-13  Score=74.09  Aligned_cols=32  Identities=41%  Similarity=0.650  Sum_probs=13.7

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      |+++|++++||.|++|++.|.+.+.|..|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERT   34 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhH
Confidence            33444444444444444444444444444443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=3.8e-12  Score=70.83  Aligned_cols=40  Identities=23%  Similarity=0.454  Sum_probs=29.5

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDI  218 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  218 (292)
                      +|+++++|.|+.|++.|...+.|..|+++|++++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4666777777777777777777777777777777777753

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.6e-12  Score=73.53  Aligned_cols=43  Identities=30%  Similarity=0.508  Sum_probs=31.1

Q ss_pred             hhhccccCCcceeCCccccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         231 SHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       231 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      .|+++|++++||.|++|++.|.+..+|..|+++| .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H-~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH-ERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHH-HHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHh-CCCCCCCCC
Confidence            4677777777777777777777777777777775 456677775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.2e-13  Score=74.41  Aligned_cols=37  Identities=46%  Similarity=0.921  Sum_probs=15.8

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      |+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            3344444444444444444444444444444444444

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.3e-12  Score=72.96  Aligned_cols=43  Identities=35%  Similarity=0.703  Sum_probs=27.9

Q ss_pred             cccCCCCCCcccc--ccccccCCchHHHHHHhhhcCCCCcccccc
Q psy4830         177 MRTHTGERPFQCA--VCSKRFTQKSSLNTHKRVHTGERPYACDIC  219 (292)
Q Consensus       177 ~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C  219 (292)
                      .++|+++++|.|+  .|++.|.....|..|+++|++++||+|++|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3456666666665  666666666666666666666666666655

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.9e-12  Score=72.10  Aligned_cols=43  Identities=28%  Similarity=0.593  Sum_probs=40.0

Q ss_pred             HHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCc
Q psy4830         204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTS  246 (292)
Q Consensus       204 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~  246 (292)
                      +.++|.+++||+|++|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3567899999999999999999999999999999999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.5e-13  Score=85.38  Aligned_cols=61  Identities=16%  Similarity=0.297  Sum_probs=30.2

Q ss_pred             HHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         200 SLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       200 ~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      .|..|+++|.+++|+.|+.|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            3444444455555555555555552 44455554 445555555555555444 2455555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.5e-12  Score=70.54  Aligned_cols=41  Identities=34%  Similarity=0.622  Sum_probs=26.0

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYAC  216 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  216 (292)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            45556666666666666666666666666666666666654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.5e-12  Score=70.80  Aligned_cols=35  Identities=46%  Similarity=0.937  Sum_probs=14.1

Q ss_pred             CCCCCccccccccccCCchHHHHHHhhhcCCCCcc
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYA  215 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  215 (292)
                      +++++|.|++|++.|...+.|..|+++|++++||.
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            33334444444444444444444444444433333

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=6.8e-12  Score=70.90  Aligned_cols=42  Identities=26%  Similarity=0.418  Sum_probs=37.4

Q ss_pred             CccccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCccccc
Q psy4830           1 MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVV   42 (292)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   42 (292)
                      +++|++++||.|++|++.|.....|.+|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            578889999999999999999999999999999999999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.4e-12  Score=80.85  Aligned_cols=66  Identities=18%  Similarity=0.244  Sum_probs=59.7

Q ss_pred             hhhhhcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCc
Q psy4830         172 SHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDK  240 (292)
Q Consensus       172 ~~~~h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  240 (292)
                      .+..|+.++.+++++.|+.|++.|. ...|..|+ .|.+++|+.|+.|++.|. ...|..|+.+|.+++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            3467888899999999999999995 99999999 899999999999999987 599999999988764

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=1.1e-11  Score=68.87  Aligned_cols=41  Identities=22%  Similarity=0.407  Sum_probs=37.0

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCCCCccccc
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVV   42 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   42 (292)
                      ++|++++||.|+.|++.|.....|.+|+++|++++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            67889999999999999999999999999999999999864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=8.9e-12  Score=68.52  Aligned_cols=39  Identities=33%  Similarity=0.583  Sum_probs=37.3

Q ss_pred             hhhcCCCCccccccccccccchhhhhhhccccCCcceeC
Q psy4830         206 RVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC  244 (292)
Q Consensus       206 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  244 (292)
                      ++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            468899999999999999999999999999999999988

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=3.6e-12  Score=82.52  Aligned_cols=59  Identities=15%  Similarity=0.266  Sum_probs=46.3

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccC
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG  238 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  238 (292)
                      +..+|+++++|.|++|++.|...+.|..|+++|++++||.|..|.    ....|..|.+.|.+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            456678888888888888888888888888888888888886544    45667777777766

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=7.8e-13  Score=85.67  Aligned_cols=58  Identities=16%  Similarity=0.212  Sum_probs=48.8

Q ss_pred             HHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhhc
Q psy4830         204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       204 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      |.++|++++||.|++|++.|.....|..|+++|++++||.|..|    .....|..|.++|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~   73 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYAD   73 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhcccc
Confidence            34568899999999999999999999999999999999999765    45677888888763

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.04  E-value=5e-11  Score=64.62  Aligned_cols=32  Identities=28%  Similarity=0.701  Sum_probs=12.9

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcCCCCc
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPY  214 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  214 (292)
                      +++|.|++||+.|...+.|..|+++|++++||
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            33344444444444444444444444443333

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.03  E-value=1.4e-10  Score=62.76  Aligned_cols=37  Identities=22%  Similarity=0.361  Sum_probs=34.4

Q ss_pred             hcCCCCccccccccccccchhhhhhhccccCCcceeC
Q psy4830         208 HTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGC  244 (292)
Q Consensus       208 h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C  244 (292)
                      |++++||.|++||+.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5788999999999999999999999999999999976

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.02  E-value=8.4e-11  Score=62.89  Aligned_cols=33  Identities=30%  Similarity=0.704  Sum_probs=19.3

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |+++|++++||.|+.|++.|.+...|..|+++|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            455555555666666666666666666665554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.9e-10  Score=61.41  Aligned_cols=36  Identities=22%  Similarity=0.581  Sum_probs=24.1

Q ss_pred             ccCCCCCCccccccccccCCchHHHHHHhhhcCCCC
Q psy4830         178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERP  213 (292)
Q Consensus       178 ~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  213 (292)
                      ++|+++++|.|++|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            345666677777777777777777777777766553

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.00  E-value=2.1e-10  Score=61.26  Aligned_cols=36  Identities=31%  Similarity=0.561  Sum_probs=32.7

Q ss_pred             HHhhhcCCCCccccccccccccchhhhhhhccccCC
Q psy4830         204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       204 H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      |+++|.+++||.|++|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            778899999999999999999999999999999874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.2e-10  Score=61.23  Aligned_cols=37  Identities=24%  Similarity=0.530  Sum_probs=32.7

Q ss_pred             CccccCCCCccCCcchhhcCChhHHHHHHhhhcCCCC
Q psy4830           1 MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERP   37 (292)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   37 (292)
                      |++|++++||.|++|++.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            5788999999999999999999999999999988764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=5e-10  Score=66.81  Aligned_cols=39  Identities=28%  Similarity=0.473  Sum_probs=30.9

Q ss_pred             CCCCCCccccc--cccccCCchHHHHHH-hhhcCCCCccccc
Q psy4830         180 HTGERPFQCAV--CSKRFTQKSSLNTHK-RVHTGERPYACDI  218 (292)
Q Consensus       180 ~~~~~~~~C~~--C~k~f~~~~~L~~H~-~~h~~~~~~~C~~  218 (292)
                      .++++||+|+.  |+++|...++|.+|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            46788888865  888888888888886 5788888887753

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.93  E-value=6.5e-10  Score=58.45  Aligned_cols=33  Identities=30%  Similarity=0.631  Sum_probs=21.1

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCC
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      |+++++|.|++|++.|...+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            445566666666666666666666666666654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.93  E-value=7.5e-10  Score=58.23  Aligned_cols=33  Identities=39%  Similarity=0.796  Sum_probs=20.8

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCCC
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      |+++++|.|++|++.|...+.|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            455566666666666666666666666666554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=7.7e-10  Score=66.01  Aligned_cols=38  Identities=18%  Similarity=0.461  Sum_probs=18.6

Q ss_pred             cCCcceeCCc--cccccCChhHHHHHhhhhcCCCCCcccC
Q psy4830         237 VGDKPFGCTS--CHLTFTSKSQFAVHLRTHHTVGANHVCN  274 (292)
Q Consensus       237 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~hh~~~~~~~C~  274 (292)
                      +|+|||+|+.  |+++|.+.++|..|++..|++++||.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            4455555543  5555555555555543223445555443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.92  E-value=3.3e-10  Score=59.66  Aligned_cols=29  Identities=41%  Similarity=0.825  Sum_probs=20.3

Q ss_pred             ccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       236 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |++++||.|++|++.|.+.+.|..|+++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H   30 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHc
Confidence            56667777777777777777777777665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.91  E-value=8.6e-10  Score=57.14  Aligned_cols=31  Identities=29%  Similarity=0.523  Sum_probs=20.4

Q ss_pred             CccccccccccCCchHHHHHHhhhcCCCCcc
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYA  215 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  215 (292)
                      ||.|++||+.|...+.|..|+++|++++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5666666666666666666666666666653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.90  E-value=4.6e-10  Score=58.19  Aligned_cols=30  Identities=27%  Similarity=0.313  Sum_probs=16.5

Q ss_pred             CccccccccccccchhhhhhhccccCCcce
Q psy4830         213 PYACDICDKRFAVKSYVTSHRWSHVGDKPF  242 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  242 (292)
                      ||.|++||+.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.87  E-value=7.8e-10  Score=57.97  Aligned_cols=26  Identities=27%  Similarity=0.554  Sum_probs=19.4

Q ss_pred             ccCCcceeCCccccccCChhHHHHHh
Q psy4830         236 HVGDKPFGCTSCHLTFTSKSQFAVHL  261 (292)
Q Consensus       236 h~~~~~~~C~~C~~~f~~~~~L~~H~  261 (292)
                      +.|++||.|+.||++|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677777777777777777777776

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.86  E-value=1.6e-09  Score=56.88  Aligned_cols=35  Identities=29%  Similarity=0.469  Sum_probs=28.7

Q ss_pred             cccCCCCccCCcchhhcCChhHHHHHHhhhcCCCC
Q psy4830           3 LHSGNKPYHCTACDASFCRKPYLEIHMRTHTGERP   37 (292)
Q Consensus         3 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   37 (292)
                      +|++++||.|++|++.|.....|.+|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47788888888888888888888888888887654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2e-09  Score=57.28  Aligned_cols=30  Identities=23%  Similarity=0.502  Sum_probs=24.2

Q ss_pred             cccCCcceeCCc--cccccCChhHHHHHhhhh
Q psy4830         235 SHVGDKPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       235 ~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      .+++++||.|+.  |+++|.++++|.+|+++|
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            467788888875  888888888888888886

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.2e-09  Score=57.17  Aligned_cols=32  Identities=25%  Similarity=0.435  Sum_probs=23.8

Q ss_pred             CCCCCCccccc--cccccCCchHHHHHHhhhcCC
Q psy4830         180 HTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       180 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +++++||+|+.  |++.|..++.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45677777765  777777777777777777764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.7e-09  Score=57.58  Aligned_cols=35  Identities=26%  Similarity=0.387  Sum_probs=29.7

Q ss_pred             CccccCCCCccCCcchhhcCChhHHHHH-HhhhcCC
Q psy4830           1 MKLHSGNKPYHCTACDASFCRKPYLEIH-MRTHTGE   35 (292)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   35 (292)
                      |++|++++||+|+.|++.|.....|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            5788888899999999999988889999 8888764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.82  E-value=5.9e-10  Score=57.35  Aligned_cols=31  Identities=23%  Similarity=0.377  Sum_probs=21.7

Q ss_pred             CCccccccccccccchhhhhhhccccCCcce
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPF  242 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  242 (292)
                      +||.|++||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3667777777777777777777777777665

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.8e-09  Score=56.74  Aligned_cols=33  Identities=27%  Similarity=0.564  Sum_probs=24.3

Q ss_pred             cCCCCCCccccccccccCCc-hHHHHHHhhhcCC
Q psy4830         179 THTGERPFQCAVCSKRFTQK-SSLNTHKRVHTGE  211 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~-~~L~~H~~~h~~~  211 (292)
                      +|+++++|.|++|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46667777777777777777 7777777777665

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=2.8e-09  Score=57.11  Aligned_cols=35  Identities=31%  Similarity=0.702  Sum_probs=24.8

Q ss_pred             CCCCCCcccc--ccccccCCchHHHHHHhhhcCCCCc
Q psy4830         180 HTGERPFQCA--VCSKRFTQKSSLNTHKRVHTGERPY  214 (292)
Q Consensus       180 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~  214 (292)
                      |+++++|.|+  .|++.|...+.|.+|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3456777777  4777777777777777777777665

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.2e-09  Score=56.13  Aligned_cols=33  Identities=18%  Similarity=0.534  Sum_probs=21.1

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      .|++++||.|++|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            345566666666666666666666666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3.9e-09  Score=55.74  Aligned_cols=33  Identities=39%  Similarity=0.746  Sum_probs=24.1

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            456677777777777777777777777777665

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3.7e-09  Score=55.86  Aligned_cols=33  Identities=30%  Similarity=0.665  Sum_probs=22.4

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      .|.+++||+|++|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            355666777777777777777777777766654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.4e-09  Score=57.03  Aligned_cols=33  Identities=18%  Similarity=0.403  Sum_probs=21.4

Q ss_pred             ccCCCCCCccccccccccCCchHHHHH-HhhhcC
Q psy4830         178 RTHTGERPFQCAVCSKRFTQKSSLNTH-KRVHTG  210 (292)
Q Consensus       178 ~~~~~~~~~~C~~C~k~f~~~~~L~~H-~~~h~~  210 (292)
                      ++|++++||+|+.|++.|...+.|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            345666666666666666666666666 666654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3.5e-09  Score=56.37  Aligned_cols=36  Identities=25%  Similarity=0.484  Sum_probs=30.5

Q ss_pred             CccccCCCCccCCcchhhcCCh-hHHHHHHhhhcCCC
Q psy4830           1 MKLHSGNKPYHCTACDASFCRK-PYLEIHMRTHTGER   36 (292)
Q Consensus         1 ~~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~   36 (292)
                      .++|++++||.|++|++.|... ..|.+|+++|++++
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            1 GSSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            3678889999999999999998 89999998887753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=6e-09  Score=54.99  Aligned_cols=33  Identities=30%  Similarity=0.728  Sum_probs=23.0

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            345666777777777777777777777777665

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.76  E-value=3e-09  Score=55.73  Aligned_cols=25  Identities=28%  Similarity=0.588  Sum_probs=17.1

Q ss_pred             CCCCCccccccccccCCchHHHHHH
Q psy4830         181 TGERPFQCAVCSKRFTQKSSLNTHK  205 (292)
Q Consensus       181 ~~~~~~~C~~C~k~f~~~~~L~~H~  205 (292)
                      .+++||.|+.||++|.+.++|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566677777777777777777766

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.1e-09  Score=54.98  Aligned_cols=34  Identities=24%  Similarity=0.398  Sum_probs=28.0

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      +.|++++||.|++|++.|...+.|.+|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            4678888888888888888888888888888765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=8.6e-09  Score=54.39  Aligned_cols=34  Identities=32%  Similarity=0.622  Sum_probs=27.0

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      ..|++++||.|++|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4577888888888888888888888888887765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=8.5e-09  Score=54.41  Aligned_cols=32  Identities=41%  Similarity=0.729  Sum_probs=23.5

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +.++++|.|++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45667777777777777777777777777665

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=9.9e-09  Score=54.12  Aligned_cols=34  Identities=41%  Similarity=0.772  Sum_probs=28.0

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      .+|++++||.|++|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3677888888888888888888888888888765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=7.4e-09  Score=55.40  Aligned_cols=35  Identities=31%  Similarity=0.637  Sum_probs=30.5

Q ss_pred             ccCCCCccCC--cchhhcCChhHHHHHHhhhcCCCCc
Q psy4830           4 HSGNKPYHCT--ACDASFCRKPYLEIHMRTHTGERPF   38 (292)
Q Consensus         4 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   38 (292)
                      |++++||.|.  .|++.|...+.|.+|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5788899999  5999999999999999999888876

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.70  E-value=3.6e-09  Score=59.96  Aligned_cols=27  Identities=22%  Similarity=0.626  Sum_probs=15.6

Q ss_pred             ccCCcceeCCccccccCChhHHHHHhh
Q psy4830         236 HVGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       236 h~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      |++++||.|.+|++.|....+|..|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            455555555555555555555555555

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.69  E-value=7.5e-09  Score=58.35  Aligned_cols=37  Identities=27%  Similarity=0.493  Sum_probs=28.9

Q ss_pred             hhhhhhccccCCcceeCC--ccccccCChhHHHHHhhhh
Q psy4830         228 YVTSHRWSHVGDKPFGCT--SCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       228 ~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h  264 (292)
                      .+..|...|++++||.|+  .|+++|...++|..|+++|
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H   43 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHc
Confidence            344556678888888885  6888888888888888886

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.68  E-value=1e-09  Score=56.44  Aligned_cols=31  Identities=26%  Similarity=0.507  Sum_probs=29.4

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCCCCc
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPY  214 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~  214 (292)
                      +||.|++||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4799999999999999999999999999987

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.4e-08  Score=53.55  Aligned_cols=35  Identities=29%  Similarity=0.380  Sum_probs=28.2

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCCC
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGER   36 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   36 (292)
                      .+|++++||.|++|++.|.....|.+|+++|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            35778888888888888888888888888887653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.68  E-value=1.6e-09  Score=61.18  Aligned_cols=35  Identities=20%  Similarity=0.574  Sum_probs=21.0

Q ss_pred             cccCCCCCCcccc--ccccccCCchHHHHHHhhhcCC
Q psy4830         177 MRTHTGERPFQCA--VCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       177 ~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ...|++++||.|+  .||+.|...+.|..|+++|+++
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3445666666664  4666666666666666666554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.66  E-value=9.7e-09  Score=58.16  Aligned_cols=32  Identities=28%  Similarity=0.780  Sum_probs=18.2

Q ss_pred             CCCCCCccccccccccCCchHHHHHHh-hhcCC
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKR-VHTGE  211 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~  211 (292)
                      |+++++|.|++|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            445556666666666666666666655 55544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.63  E-value=2e-08  Score=53.29  Aligned_cols=33  Identities=36%  Similarity=0.679  Sum_probs=24.0

Q ss_pred             CCCCCCccccc--cccccCCchHHHHHHhhhcCCC
Q psy4830         180 HTGERPFQCAV--CSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       180 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      ++++++|.|++  ||+.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45677777774  7777777777777777777653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.2e-08  Score=52.79  Aligned_cols=33  Identities=36%  Similarity=0.585  Sum_probs=26.5

Q ss_pred             cccCCCCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           3 LHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         3 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      .|++++||.|++|++.|.....|..|+++|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            467778888888888888888888888888765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.58  E-value=3.3e-08  Score=49.13  Aligned_cols=27  Identities=33%  Similarity=0.721  Sum_probs=17.0

Q ss_pred             CccccccccccCCchHHHHHHhhhcCC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ||.|+.||+.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.57  E-value=3.2e-08  Score=49.58  Aligned_cols=28  Identities=29%  Similarity=0.744  Sum_probs=17.8

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCC
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +||.|+.||+.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.56  E-value=2.1e-08  Score=49.93  Aligned_cols=25  Identities=24%  Similarity=0.646  Sum_probs=15.6

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|+.|++.|.+.+.|..|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHh
Confidence            3566666666666666666666664

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.56  E-value=4.7e-08  Score=48.52  Aligned_cols=27  Identities=41%  Similarity=0.879  Sum_probs=17.5

Q ss_pred             CccccccccccCCchHHHHHHhhhcCC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ||.|++|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.54  E-value=2.4e-08  Score=50.06  Aligned_cols=25  Identities=36%  Similarity=0.758  Sum_probs=17.1

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHh
Confidence            5667777777777777777776664

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=9.4e-08  Score=57.57  Aligned_cols=29  Identities=21%  Similarity=0.329  Sum_probs=19.2

Q ss_pred             ccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       236 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +.+++||.|..|++.|.+...|.+|+++|
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~H   36 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQH   36 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhh
Confidence            45566666666666666666666666665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.53  E-value=2.9e-08  Score=49.36  Aligned_cols=24  Identities=29%  Similarity=0.725  Sum_probs=15.1

Q ss_pred             ceeCCccccccCChhHHHHHhhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ||.|++|++.|.....|..|+++|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHHh
Confidence            566666666666666666666664

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.53  E-value=4.7e-08  Score=47.68  Aligned_cols=26  Identities=42%  Similarity=0.773  Sum_probs=18.9

Q ss_pred             CcceeCCccccccCChhHHHHHhhhh
Q psy4830         239 DKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       239 ~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ++||.|+.||+.|.+.+.|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35777777777777777777777764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.53  E-value=7.8e-08  Score=49.03  Aligned_cols=28  Identities=36%  Similarity=0.809  Sum_probs=16.8

Q ss_pred             CCcccc--ccccccCCchHHHHHHhhhcCC
Q psy4830         184 RPFQCA--VCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       184 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +||.|+  .||+.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456665  5666666666666666666554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.53  E-value=4.8e-08  Score=51.78  Aligned_cols=34  Identities=32%  Similarity=0.543  Sum_probs=27.3

Q ss_pred             cccCCCCccCCc--chhhcCChhHHHHHHhhhcCCC
Q psy4830           3 LHSGNKPYHCTA--CDASFCRKPYLEIHMRTHTGER   36 (292)
Q Consensus         3 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   36 (292)
                      .|++++||.|.+  |++.|...+.|.+|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367888888884  8888888888888888887753

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.53  E-value=3.5e-08  Score=48.22  Aligned_cols=26  Identities=27%  Similarity=0.653  Sum_probs=19.6

Q ss_pred             CcceeCCccccccCChhHHHHHhhhh
Q psy4830         239 DKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       239 ~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ++||.|+.||+.|...++|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            36777888888888888888887764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.52  E-value=6.5e-08  Score=48.38  Aligned_cols=28  Identities=29%  Similarity=0.587  Sum_probs=18.4

Q ss_pred             CccccccccccCCchHHHHHHhhhcCCC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      +|.|++|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5666666666666666666666666554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=1e-07  Score=57.39  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=32.0

Q ss_pred             cCCCCCCccccccccccCCchHHHHHHhhhcCCCCccccccc
Q psy4830         179 THTGERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICD  220 (292)
Q Consensus       179 ~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~  220 (292)
                      .+.+++||.|.+|++.|...+.|.+|+++|+++. ..+.+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            3567888999999999999999999999998864 3455544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=5.2e-08  Score=48.35  Aligned_cols=27  Identities=44%  Similarity=1.006  Sum_probs=19.6

Q ss_pred             CccccccccccCCchHHHHHHhhhcCC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            577777777777777777777777665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=6.8e-08  Score=47.86  Aligned_cols=27  Identities=30%  Similarity=0.767  Sum_probs=18.7

Q ss_pred             CccccccccccCCchHHHHHHhhhcCC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566777777777777777777776654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.51  E-value=4.7e-08  Score=48.11  Aligned_cols=26  Identities=58%  Similarity=1.155  Sum_probs=15.5

Q ss_pred             CCccccccccccCCchHHHHHHhhhc
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      ++|.|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666665554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.51  E-value=6.1e-08  Score=49.44  Aligned_cols=25  Identities=24%  Similarity=0.796  Sum_probs=13.4

Q ss_pred             cceeCC--ccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCT--SCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~--~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|+  .|++.|.+.++|..|+++|
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H   28 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHc
Confidence            455555  4555555555555555553

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.50  E-value=5.3e-08  Score=49.29  Aligned_cols=19  Identities=53%  Similarity=0.962  Sum_probs=7.3

Q ss_pred             ccccccCCchHHHHHHhhh
Q psy4830         190 VCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       190 ~C~k~f~~~~~L~~H~~~h  208 (292)
                      .||+.|...+.|..|+++|
T Consensus         9 ~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            9 YCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             TCCCBCSSHHHHHHHHTTT
T ss_pred             CCCcccCCHhHHHHHHHHh
Confidence            3333333333333333333

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.50  E-value=7.6e-08  Score=48.66  Aligned_cols=29  Identities=38%  Similarity=0.910  Sum_probs=26.9

Q ss_pred             CCcccc--ccccccccchhhhhhhccccCCc
Q psy4830         212 RPYACD--ICDKRFAVKSYVTSHRWSHVGDK  240 (292)
Q Consensus       212 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~~  240 (292)
                      +||.|+  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.49  E-value=5.5e-08  Score=47.45  Aligned_cols=25  Identities=36%  Similarity=0.878  Sum_probs=17.0

Q ss_pred             CCccccccccccCCchHHHHHHhhh
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4666777777777777777776665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.49  E-value=4.1e-08  Score=47.94  Aligned_cols=25  Identities=28%  Similarity=0.719  Sum_probs=15.5

Q ss_pred             CCccccccccccCCchHHHHHHhhh
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.49  E-value=6.7e-08  Score=47.54  Aligned_cols=25  Identities=36%  Similarity=0.879  Sum_probs=17.1

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|+.|++.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            5667777777777777777776664

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.49  E-value=4.3e-08  Score=49.06  Aligned_cols=25  Identities=24%  Similarity=0.680  Sum_probs=16.1

Q ss_pred             ceeCCccccccCChhHHHHHhhhhc
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      ||.|+.|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHc
Confidence            5666666666666666666666654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.46  E-value=6.7e-08  Score=47.07  Aligned_cols=22  Identities=32%  Similarity=0.699  Sum_probs=8.8

Q ss_pred             eeCCccccccCChhHHHHHhhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      |.|+.|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~   23 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRV   23 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHHH
Confidence            3344444444444444444333

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.9e-08  Score=50.10  Aligned_cols=29  Identities=59%  Similarity=0.997  Sum_probs=26.4

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCCC
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      +||.|+.||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47999999999999999999999998763

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.46  E-value=8.7e-08  Score=46.63  Aligned_cols=25  Identities=40%  Similarity=1.020  Sum_probs=14.0

Q ss_pred             ccccccccccCCchHHHHHHhhhcC
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~~  210 (292)
                      |.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            5555555555555555555555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.45  E-value=4.8e-08  Score=48.45  Aligned_cols=24  Identities=25%  Similarity=0.646  Sum_probs=15.1

Q ss_pred             ceeCCccccccCChhHHHHHhhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ||.|+.|++.|.....|..|+++|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHh
Confidence            566666666666666666666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.83  E-value=2.2e-08  Score=50.24  Aligned_cols=26  Identities=38%  Similarity=0.985  Sum_probs=13.0

Q ss_pred             CccccccccccCCchHHHHHHhhhcC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~  210 (292)
                      ||.|+.||+.|...+.|..|+++|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            44555555555555555555544443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=1e-07  Score=47.71  Aligned_cols=17  Identities=35%  Similarity=0.929  Sum_probs=6.0

Q ss_pred             ccccccccCCchHHHHH
Q psy4830         188 CAVCSKRFTQKSSLNTH  204 (292)
Q Consensus       188 C~~C~k~f~~~~~L~~H  204 (292)
                      |+.||+.|.+.+.|..|
T Consensus         5 C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            5 CGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CTTTCCBCSSSHHHHHH
T ss_pred             CcccCcccCChHHHHHH
Confidence            33333333333333333

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=3.8e-08  Score=48.88  Aligned_cols=25  Identities=36%  Similarity=0.784  Sum_probs=17.4

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|+.|++.|.+..+|..|+++|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHh
Confidence            3567777777777777777777665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.40  E-value=1.6e-07  Score=46.97  Aligned_cols=29  Identities=28%  Similarity=0.771  Sum_probs=26.6

Q ss_pred             CCccccccccccccchhhhhh-hccccCCc
Q psy4830         212 RPYACDICDKRFAVKSYVTSH-RWSHVGDK  240 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H-~~~h~~~~  240 (292)
                      +||.|+.||+.|...+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 78998874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.70  E-value=5.2e-08  Score=47.04  Aligned_cols=25  Identities=44%  Similarity=0.869  Sum_probs=16.0

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|+.||+.|.+.+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666666666666666666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.7e-08  Score=46.89  Aligned_cols=24  Identities=50%  Similarity=0.964  Sum_probs=11.8

Q ss_pred             CccccccccccCCchHHHHHHhhh
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      ||.|+.||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            444555555555555555554443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.16  E-value=9.2e-07  Score=43.58  Aligned_cols=25  Identities=36%  Similarity=0.890  Sum_probs=16.0

Q ss_pred             Ccccc--ccccccCCchHHHHHHhhhc
Q psy4830         185 PFQCA--VCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       185 ~~~C~--~C~k~f~~~~~L~~H~~~h~  209 (292)
                      +|.|+  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            46666  66666666666666666654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.10  E-value=1.6e-06  Score=42.65  Aligned_cols=25  Identities=20%  Similarity=0.584  Sum_probs=17.0

Q ss_pred             cceeCC--ccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCT--SCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~--~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|+  .|++.|.+.+.|..|+++|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            356677  7777777777777777665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.02  E-value=4.7e-06  Score=49.84  Aligned_cols=25  Identities=20%  Similarity=0.636  Sum_probs=16.4

Q ss_pred             ceeCC--ccccccCChhHHHHHhhhhc
Q psy4830         241 PFGCT--SCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       241 ~~~C~--~C~~~f~~~~~L~~H~~~hh  265 (292)
                      +|.|.  .|+..+.....|..|+++.|
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCEeeCCCCcCCCCChHHHHhhccccC
Confidence            56675  57776666677777766643

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.82  E-value=2.3e-05  Score=46.81  Aligned_cols=50  Identities=22%  Similarity=0.324  Sum_probs=40.6

Q ss_pred             eeCCc--cccccCChhHHHHHhhhhcCCCC------CcccC--CCCCCccChHHHHhhhc
Q psy4830         242 FGCTS--CHLTFTSKSQFAVHLRTHHTVGA------NHVCN--VCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       242 ~~C~~--C~~~f~~~~~L~~H~~~hh~~~~------~~~C~--~C~~~f~~~~~l~~H~r  291 (292)
                      +.|..  |++.|.+...|..|+...|.+.+      +|.|.  .|+..+.....|..|+|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            34543  89999999999999864455444      79997  89999999999999987

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.70  E-value=1e-05  Score=55.76  Aligned_cols=75  Identities=28%  Similarity=0.406  Sum_probs=47.6

Q ss_pred             CCccccccccccCCchHHHHHH--hhhcCC-CCcccccc------ccccccchhhhhhhccccCCcceeCCccccccCCh
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHK--RVHTGE-RPYACDIC------DKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSK  254 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~--~~h~~~-~~~~C~~C------~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~  254 (292)
                      +++.|.+|+..|.+.+.+..|.  +.|... +.+.+...      ++.+...    .+...+.+...|.|.+|++.|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCCH
Confidence            5689999999999999999998  556432 23332110      1222211    123345556677777777777777


Q ss_pred             hHHHHHhh
Q psy4830         255 SQFAVHLR  262 (292)
Q Consensus       255 ~~L~~H~~  262 (292)
                      ..|..|+.
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            77777764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.39  E-value=0.00014  Score=50.03  Aligned_cols=75  Identities=15%  Similarity=0.262  Sum_probs=50.3

Q ss_pred             CCccccccccccccchhhhhhh--ccccCC-cceeCCcc------ccccCChhHHHHHhhhhcCCCCCcccCCCCCCccC
Q psy4830         212 RPYACDICDKRFAVKSYVTSHR--WSHVGD-KPFGCTSC------HLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVR  282 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~  282 (292)
                      +++.|.+|+..|.+...+..|.  +.|... +.+.+...      ++.+....    +... ......|.|.+|++.|.+
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEIS-DGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCS-SCCCTTTEETTTTEECSS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccc-cCCCCCeEcCCCCCEeCC
Confidence            6789999999999999999998  445322 23333110      22222111    1112 245567899999999999


Q ss_pred             hHHHHhhhc
Q psy4830         283 DSYLIRHQN  291 (292)
Q Consensus       283 ~~~l~~H~r  291 (292)
                      ...|..|.+
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.36  E-value=4.4e-05  Score=51.46  Aligned_cols=30  Identities=20%  Similarity=0.411  Sum_probs=18.8

Q ss_pred             ccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       234 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      ..|+|++||.|..|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            445666666666666666666666666554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.98  E-value=0.00017  Score=48.64  Aligned_cols=28  Identities=29%  Similarity=0.504  Sum_probs=25.6

Q ss_pred             cCCCCCcccCCCCCCccChHHHHhhhcC
Q psy4830         265 HTVGANHVCNVCGRSFVRDSYLIRHQNK  292 (292)
Q Consensus       265 h~~~~~~~C~~C~~~f~~~~~l~~H~rk  292 (292)
                      ++++++|.|..|++.|.+.+.|..|+|.
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            5778899999999999999999999873

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.71  E-value=0.0011  Score=35.50  Aligned_cols=23  Identities=17%  Similarity=0.345  Sum_probs=16.0

Q ss_pred             cceeCCccccccCChhHHHHHhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45677777777777777777765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.29  E-value=0.0022  Score=46.58  Aligned_cols=71  Identities=17%  Similarity=0.363  Sum_probs=43.5

Q ss_pred             ccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         190 VCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       190 ~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      -|+..+. ...|..|.. .-.-++..|+.|+..+ .+..|..|....-..++-.|+.|+..+.. ..|..|..++
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~  159 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNC  159 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTC
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhC
Confidence            4555443 445666652 2333556677777766 45566777765566666777777776644 5677777664

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.17  E-value=0.0045  Score=33.21  Aligned_cols=24  Identities=21%  Similarity=0.382  Sum_probs=20.4

Q ss_pred             CCccccccccccCCchHHHHHHhh
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRV  207 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~  207 (292)
                      .+|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            468899999999999999999874

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.76  E-value=0.0085  Score=30.06  Aligned_cols=28  Identities=25%  Similarity=0.511  Sum_probs=23.3

Q ss_pred             ceeCCccccccCChhHHHHHhhhhcCCC
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHHTVG  268 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh~~~  268 (292)
                      .|.||+|.+.|.+...|..|....|..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999999999999988777654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.91  E-value=0.026  Score=40.87  Aligned_cols=100  Identities=16%  Similarity=0.390  Sum_probs=70.7

Q ss_pred             ccCCcchhhcCChh-----HHHHHHhhhcCCCCccc--ccchhhcCChhHHHHHHhhcCCCcceecccccccCCChhHHH
Q psy4830          10 YHCTACDASFCRKP-----YLEIHMRTHTGERPFQC--VVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLE   82 (292)
Q Consensus        10 ~~C~~C~~~f~~~~-----~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (292)
                      ..|+.|...+....     .+.+-+    .+....|  .-|+.... ...|..|+. .-+..+..|+.|+..+ .+..|.
T Consensus        54 ~~CP~Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~  126 (170)
T 3hcs_A           54 HKCPVDNEILLENQLFPDNFAKREI----LSLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHIN  126 (170)
T ss_dssp             SBCTTTCCBCCGGGCEECHHHHHHH----HTSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHH
T ss_pred             CCCCCCccCcchhhhhhhHHHHHHH----hhcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHH
Confidence            37999988776531     122222    2344567  45766554 567888974 3355678899999988 677899


Q ss_pred             HHHHhcCCCCceecCccccccCChHHHHHHHHHhh
Q psy4830          83 VHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHI  117 (292)
Q Consensus        83 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  117 (292)
                      .|+...-..++-.|+.|+..+.. ..|..|..++.
T Consensus       127 ~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~  160 (170)
T 3hcs_A          127 IHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCP  160 (170)
T ss_dssp             HHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCC
T ss_pred             HHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCc
Confidence            99988888888999999998864 56889987643

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.12  E-value=0.071  Score=26.70  Aligned_cols=23  Identities=17%  Similarity=0.473  Sum_probs=14.6

Q ss_pred             ceecccccccCCChhHHHHHHHh
Q psy4830          65 QYYCDACDATFTTKQNLEVHMRT   87 (292)
Q Consensus        65 ~~~C~~C~~~f~~~~~l~~H~~~   87 (292)
                      .|.|++|.+.|.+...|..|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHh
Confidence            36666666666666666666543

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=93.02  E-value=0.042  Score=33.64  Aligned_cols=47  Identities=15%  Similarity=0.450  Sum_probs=22.4

Q ss_pred             Cccc-cccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHh
Q psy4830         213 PYAC-DICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHL  261 (292)
Q Consensus       213 ~~~C-~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  261 (292)
                      +..| ..|+..+. +..|..|+...-..++..|+.|+..|.. ..|..|.
T Consensus        16 ~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           16 VIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             CCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTT
T ss_pred             ccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHH
Confidence            3445 34555443 2344555443334445556666555542 3455554

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=91.83  E-value=0.031  Score=33.68  Aligned_cols=13  Identities=31%  Similarity=0.703  Sum_probs=9.3

Q ss_pred             ceeCCccccccCC
Q psy4830         241 PFGCTSCHLTFTS  253 (292)
Q Consensus       241 ~~~C~~C~~~f~~  253 (292)
                      .|+||.||..|.-
T Consensus        51 ~FkCP~CgEEFyG   63 (95)
T 2k5c_A           51 VFKCPVCGEEFYG   63 (95)
T ss_dssp             EEECTTTCCEEET
T ss_pred             hhcCCCccHHHhc
Confidence            5778888777754

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=91.68  E-value=0.11  Score=31.71  Aligned_cols=60  Identities=18%  Similarity=0.408  Sum_probs=42.2

Q ss_pred             hhhhhhhccccCCcceeC-CccccccCChhHHHHHhhhhcCCCCCcccCCCCCCccChHHHHhhh
Q psy4830         227 SYVTSHRWSHVGDKPFGC-TSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       227 ~~L~~H~~~h~~~~~~~C-~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      ..|..|+ ..-.-.+..| ..|+..+. +.+|..|+... -..++..|..|+..|.. ..|..|.
T Consensus         3 ~~l~~H~-~~C~~~~v~C~~~C~~~v~-r~~l~~H~~~~-C~~r~v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A            3 SGSSGHL-NTCSFNVIPCPNRCPMKLS-RRDLPAHLQHD-CPKRRLKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             CSCSCCC-CCCCCSCCBCTTCCSCBCC-SSSSTTTTTTS-CTTSCCCCSSSCCCCCH-HHHHHTT
T ss_pred             hHHHHHH-HHCCCcccCCCccccHHhh-HhHHHhhCHhh-CCCcceECCCCCCccCH-HHHHHHH
Confidence            3456666 3444567789 57998775 47899998642 24466789999999874 5678886

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.67  E-value=0.2  Score=30.36  Aligned_cols=43  Identities=23%  Similarity=0.479  Sum_probs=24.0

Q ss_pred             CCcceecccccccCCChhHHHHHHHhcCCCCceecCccccccCC
Q psy4830          62 PYIQYYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQ  105 (292)
Q Consensus        62 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  105 (292)
                      +..-|.|+.|+.++. +..|..|...-.+-..|.|-.|++.|..
T Consensus         7 ~MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            7 GMVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             CCCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             ceeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC
Confidence            344566666665543 3455666554444345666666666653

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.63  E-value=0.35  Score=24.28  Aligned_cols=18  Identities=33%  Similarity=0.861  Sum_probs=7.3

Q ss_pred             ecccccccCCChhHHHHH
Q psy4830          67 YCDACDATFTTKQNLEVH   84 (292)
Q Consensus        67 ~C~~C~~~f~~~~~l~~H   84 (292)
                      .|..|+.+|.+...+..|
T Consensus        10 ~C~~C~IsF~~l~ty~aH   27 (36)
T 1fu9_A           10 YCSTCDISFNYVKTYLAH   27 (36)
T ss_dssp             EETTTTEECSSHHHHHHH
T ss_pred             eeccccceehhhHHHhhh
Confidence            344444444444444333

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=90.23  E-value=0.15  Score=27.61  Aligned_cols=12  Identities=17%  Similarity=0.758  Sum_probs=7.2

Q ss_pred             ceeCCccccccC
Q psy4830         241 PFGCTSCHLTFT  252 (292)
Q Consensus       241 ~~~C~~C~~~f~  252 (292)
                      .|.|.+||..+.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            456666666554

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=89.98  E-value=0.28  Score=23.64  Aligned_cols=25  Identities=20%  Similarity=0.521  Sum_probs=20.9

Q ss_pred             eeCCccccccCChhHHHHHhhhhcC
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      -.|..|.+.++.-.+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3588999999999999999987654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.65  E-value=0.18  Score=30.56  Aligned_cols=46  Identities=24%  Similarity=0.375  Sum_probs=25.6

Q ss_pred             CccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhh
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSH  232 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H  232 (292)
                      .|.|+.||.++. +..|..|...=.+...|.|-.|++.|.. ...+.|
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            366777776554 4456666544333345666666666664 334444

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.52  E-value=0.45  Score=23.88  Aligned_cols=24  Identities=21%  Similarity=0.405  Sum_probs=18.0

Q ss_pred             CCccccccccccCCchHHHHHHhh
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRV  207 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~  207 (292)
                      ..+.|..|+-+|.+...+..|++.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            457788888888888888888653

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=88.63  E-value=0.32  Score=26.01  Aligned_cols=12  Identities=42%  Similarity=0.991  Sum_probs=6.4

Q ss_pred             eeCCccccccCC
Q psy4830         242 FGCTSCHLTFTS  253 (292)
Q Consensus       242 ~~C~~C~~~f~~  253 (292)
                      |.|--||+.|+.
T Consensus         4 Y~C~rCg~~fs~   15 (48)
T 4ayb_P            4 YRCGKCWKTFTD   15 (48)
T ss_dssp             -CCCCTTTTCCC
T ss_pred             EEeeccCCCccH
Confidence            555566665554

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=87.54  E-value=0.36  Score=31.19  Aligned_cols=29  Identities=24%  Similarity=0.596  Sum_probs=16.3

Q ss_pred             CCccccccccccccchhhhhhhccccCCcceeCCcccccc
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTF  251 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  251 (292)
                      .||+|..||..|.           -...+|-.||.|+...
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCc
Confidence            4677777777761           1123455677775443

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.38  E-value=0.45  Score=22.56  Aligned_cols=21  Identities=19%  Similarity=0.600  Sum_probs=15.3

Q ss_pred             eeCCccccccCChhHHHHHhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      |.|++|.....+...|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            677777777777777777753

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.45  E-value=0.41  Score=29.75  Aligned_cols=23  Identities=39%  Similarity=0.709  Sum_probs=15.0

Q ss_pred             ceeCCccccccCChhHHHHHhhhhcC
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      ...|-+||+.|..   |++|+.++|+
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hg   43 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHS   43 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTC
T ss_pred             ceEecccchhhHH---HHHHHHHccC
Confidence            3567777777763   6677777543

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=86.37  E-value=1.6  Score=24.09  Aligned_cols=45  Identities=27%  Similarity=0.580  Sum_probs=22.3

Q ss_pred             cccccccccccchhhhhhhccccCCcceeCCccc-cccCChhHHHHHhh
Q psy4830         215 ACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCH-LTFTSKSQFAVHLR  262 (292)
Q Consensus       215 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~-~~f~~~~~L~~H~~  262 (292)
                      .|++|.....+...|..|...-...   +||+|- -.-.+.+.|..|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHH
Confidence            4555555555555555555443222   355552 23344555555544

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.12  E-value=0.38  Score=31.05  Aligned_cols=30  Identities=27%  Similarity=0.627  Sum_probs=18.7

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCCCCccccccccccc
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFA  224 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~  224 (292)
                      .||.|..||..|..           ...+|-.|+.|+....
T Consensus        66 ~p~~C~~CG~~F~~-----------~~~kPsrCP~CkSe~I   95 (105)
T 2gmg_A           66 KPAQCRKCGFVFKA-----------EINIPSRCPKCKSEWI   95 (105)
T ss_dssp             CCCBBTTTCCBCCC-----------CSSCCSSCSSSCCCCB
T ss_pred             ECcChhhCcCeecc-----------cCCCCCCCcCCCCCcc
Confidence            46778888877711           1235667777776543

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.39  E-value=0.36  Score=26.71  Aligned_cols=21  Identities=19%  Similarity=0.491  Sum_probs=16.8

Q ss_pred             eeCCccccccCChhHHHHHhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      -.|..|+..|..+.+|..|+=
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            478888888888888888863

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.82  E-value=0.64  Score=28.91  Aligned_cols=29  Identities=28%  Similarity=0.551  Sum_probs=22.7

Q ss_pred             CCCCccccccccccCCchHHHHHHhhhcCCCC
Q psy4830         182 GERPFQCAVCSKRFTQKSSLNTHKRVHTGERP  213 (292)
Q Consensus       182 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~  213 (292)
                      .+....|-+||+.|.   .|.+|+..++|-.|
T Consensus        18 ~~d~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           18 QDDHIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             CSSCEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             CCCceEecccchhhH---HHHHHHHHccCCCH
Confidence            345578999999998   48899999777655

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=83.64  E-value=0.57  Score=24.25  Aligned_cols=25  Identities=16%  Similarity=0.317  Sum_probs=18.1

Q ss_pred             CCccccccccccCCchHHHHHHhhhc
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      ..+.|+.||+.+.. ..+..|.-.|-
T Consensus         8 ~~~~C~~C~~~i~~-~~~~EH~D~H~   32 (39)
T 2i5o_A            8 DQVPCEKCGSLVPV-WDMPEHMDYHF   32 (39)
T ss_dssp             CEEECTTTCCEEEG-GGHHHHHHHHH
T ss_pred             CCcccccccCcCCc-ccccchhhHHH
Confidence            45788888888876 55677776653

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=82.99  E-value=2.5  Score=23.38  Aligned_cols=20  Identities=25%  Similarity=0.614  Sum_probs=9.7

Q ss_pred             ccccchhhcCChhHHHHHHh
Q psy4830          39 QCVVCLKRFSQKSALNTHKR   58 (292)
Q Consensus        39 ~C~~C~~~f~~~~~l~~H~~   58 (292)
                      .|++|.....+...|..|..
T Consensus         5 vC~~C~~ECET~kEl~~H~~   24 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQ   24 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHH
T ss_pred             hhhHHHhhhhhHHHHHHHhc
Confidence            34455444444445555544

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=82.76  E-value=1.1  Score=28.67  Aligned_cols=49  Identities=18%  Similarity=0.397  Sum_probs=33.6

Q ss_pred             ccccccccccccchhhhhhhccccCCcceeCC---ccccccCChhHHHHHhhhhcCCCC
Q psy4830         214 YACDICDKRFAVKSYVTSHRWSHVGDKPFGCT---SCHLTFTSKSQFAVHLRTHHTVGA  269 (292)
Q Consensus       214 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~---~C~~~f~~~~~L~~H~~~hh~~~~  269 (292)
                      -.|+.|...+.+-..       +..+..|.|+   .|.++|-+..+|+.|+...|....
T Consensus        38 k~Cp~C~~~V~rVe~-------~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~   89 (101)
T 3vk6_A           38 KMCPGCSDPVQRIEQ-------CTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAG   89 (101)
T ss_dssp             CBCTTTCCBCSEEEE-------EEGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSC
T ss_pred             CCCcCcCCeeeeeEE-------eccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcC
Confidence            457777766654322       2235667787   499999999999999887775443

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=81.84  E-value=0.68  Score=28.11  Aligned_cols=27  Identities=19%  Similarity=0.383  Sum_probs=20.6

Q ss_pred             cceeCCccccccC-------ChhHHHHHhhhhcC
Q psy4830         240 KPFGCTSCHLTFT-------SKSQFAVHLRTHHT  266 (292)
Q Consensus       240 ~~~~C~~C~~~f~-------~~~~L~~H~~~hh~  266 (292)
                      ..-.|..|++.+.       .-+.|.+|++..|.
T Consensus        27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~   60 (76)
T 2djr_A           27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHR   60 (76)
T ss_dssp             SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTH
T ss_pred             CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCH
Confidence            3467888888887       24689999988874

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=81.48  E-value=0.65  Score=25.71  Aligned_cols=21  Identities=19%  Similarity=0.472  Sum_probs=16.3

Q ss_pred             ccCCcchhhcCChhHHHHHHh
Q psy4830          10 YHCTACDASFCRKPYLEIHMR   30 (292)
Q Consensus        10 ~~C~~C~~~f~~~~~l~~H~~   30 (292)
                      -.|.+|+..|..+..++.|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            578888888888888877763

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=80.18  E-value=0.82  Score=33.91  Aligned_cols=12  Identities=25%  Similarity=0.393  Sum_probs=6.7

Q ss_pred             cceeCCcccccc
Q psy4830         240 KPFGCTSCHLTF  251 (292)
Q Consensus       240 ~~~~C~~C~~~f  251 (292)
                      ..|.|++||..+
T Consensus       170 ~~~~C~~CG~i~  181 (202)
T 1yuz_A          170 KFHLCPICGYIH  181 (202)
T ss_dssp             CEEECSSSCCEE
T ss_pred             cEEEECCCCCEE
Confidence            345666666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	292
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-11
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-10
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	8e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-10
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-10
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-09
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-09
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	5e-10
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-10
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-09
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	4e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	7e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-07
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	4e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-06
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	6e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	0.003
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.003

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (131), Expect = 6e-11
 Identities = 17/32 (53%), Positives = 23/32 (71%)

Query: 180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE 211
           H+GE+P+ C  C K F++ S L  H+RVHTGE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (123), Expect = 6e-10
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 88  HTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
           H+GE+PY C  C K FS+ S L  H+R+H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (110), Expect = 5e-08
 Identities = 17/32 (53%), Positives = 18/32 (56%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGE 35
          HSG KPY C  C  +F R   L  H R HTGE
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 32 HTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          H+GE+P+ CV C K FS+ S L  H+R+H
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (101), Expect = 7e-07
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 207 VHTGERPYACDICDKRFAVKSYVTSHRWSHVG 238
           +H+GE+PY C  C K F+  S +  H+  H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 8e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           H G+KP+GC  C   F+  S    H R H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.2 bits (74), Expect = 0.003
 Identities = 17/63 (26%), Positives = 19/63 (30%), Gaps = 31/63 (49%)

Query: 121 HTEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMRTH 180
           H+ +KPY C  C  AFSR   L                                 H R H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSIL-------------------------------VQHQRVH 30

Query: 181 TGE 183
           TGE
Sbjct: 31  TGE 33

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 181 TGERPFQCAVCSKRFTQKSSLNTH-KRVHTGERPYACDI 218
           +  +P+ C  C K F++   LN H K+VHT ERP+ C +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 89  TGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
           +  +PY C+ C K FS+   LN H +      HT ++P+ C
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQV----HTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (112), Expect = 2e-08
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 5  SGNKPYHCTACDASFCRKPYLEIHMR-THTGERPFQCVV 42
          S  KPY C +C   F R  +L  H++  HT ERP +C V
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (103), Expect = 4e-07
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 27/66 (40%)

Query: 33 TGERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTHTGER 92
          +  +P+ C  C K FS+   LN H +                           + HT ER
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIK---------------------------QVHTSER 33

Query: 93 PYQCEV 98
          P++C+V
Sbjct: 34 PHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 5e-06
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 209 TGERPYACDICDKRFAVKSYVTSH-RWSHVGDKPFGC 244
           +  +PY C  C K F+   ++  H +  H  ++P  C
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 32/70 (45%)

Query: 122 TEDKPYHCTGCDAAFSRKQYLEVNHTTVLAVMQPSLGNNTWSAKFLTSLFSHQVHMR-TH 180
           +  KPY C  C   FSR  +L                                 H++  H
Sbjct: 1   SVGKPYICQSCGKGFSRPDHL-------------------------------NGHIKQVH 29

Query: 181 TGERPFQCAV 190
           T ERP +C V
Sbjct: 30  TSERPHKCQV 39

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.8 bits (127), Expect = 2e-10
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIHIN 118
             R  TG +P+QC  C++ FS+   L  H++ H+ 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.6 bits (116), Expect = 6e-09
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTG 210
             R  TG +PFQC  C + F++   L  H++ H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (115), Expect = 8e-09
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMHI 61
            R  TG +PFQC  C + FS+   L  H++ H+
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 4e-06
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG 238
             R  TG +P+ C  CD+ F+   ++  HR  H+ 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTG 34
           +  +G KP+ C  CD SF R  +L +H + H  
Sbjct: 3  TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTV 267
                 G KPF C  C  +F+     A+H + H  V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (124), Expect = 5e-10
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE 211
                   R ++C  C K F+  S L+ H+R HTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (116), Expect = 6e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 84  HMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
                   R Y+C+ C K FS  S L+ H+R H
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (103), Expect = 4e-07
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 28 HMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
                  R ++C  C K FS  S L+ H+R H
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (98), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 14/35 (40%)

Query: 1  MKLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE 35
                 + Y C  C  SF     L  H RTHTGE
Sbjct: 4  EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 204 HKRVHTGERPYACDICDKRFAVKSYVTSHRWSHVG 238
            +      R Y CD C K F+  S ++ HR +H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 6e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
             W     + + C  C  +F+  S  + H RTH
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (124), Expect = 6e-10
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTED 124
           RTH+GE+PY+C +C+ RF+Q  ++  H        HTE+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK----HTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (119), Expect = 3e-09
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHK-RVHTGE 211
           RTH+GE+P++C +C  RFTQ  ++  H  + HT  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 30 RTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          RTH+GE+P++C +C  RF+Q   +  H    
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 206 RVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
           R H+GE+PY C IC  RF     +  H    
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 8e-05
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE 35
          + HSG KPY C  C A F +   +++H+     E
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT 266
           H G+KP+ C  CH  FT      +H+   HT
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHT 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (123), Expect = 8e-10
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 86  RTHTGERPYQCEVCNKRFSQKSSLNTHKRIHIN 118
           RTHTGE+PY C  C+K F QK  L+ H + + +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (122), Expect = 1e-09
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 178 RTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE 211
           RTHTGE+P+ C+ C K F QK  L+ H + +   
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 9e-08
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 30 RTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          RTHTGE+P+ C  C K F QK  L+ H + +
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 4e-06
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 2  KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE 35
          + H+G KPY C+ CD +F +K  L++H + +   
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 4e-06
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 206 RVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
           R HTGE+PYAC  CDK F  K  +  H   +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 5e-08
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 35 ERPFQCVVCLKRFSQKSALNTHKRMHIPYIQYYCDACDATFTTKQNLEVHMRTH 88
          ++ + C  C K F+ KS  + H  MH+    Y C  C   F  K +L  HM+ H
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 1e-07
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 66  YYCDACDATFTTKQNLEVHMRTHTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
           Y C  C  +FT K   + HM  H G RPY C VC K+F  K  L  H +IH
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 3e-07
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 8  KPYHCTACDASFCRKPYLEIHMRTHTGERPFQCVVCLKRFSQKSALNTHKRMH 60
          K Y C  C  SF  K   + HM  H G RP+ C VC K+F  K  L  H ++H
Sbjct: 2  KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 6e-07
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH 236
           ++ + C  C K FT KS  + H  +H G RPY C +C K+F +K ++  H   H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 6e-06
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 211 ERPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH 264
           ++ Y C  C K F  KS    H   H+G +P+GC  C   F  K     H++ H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 2e-04
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 91  ERPYQCEVCNKRFSQKSSLNTHKRIHINYLHTEDKPYHCTGCDAAFSRKQYL 142
           ++ Y C+ C K F+ KS  + H  +H+         Y C  C   F  K +L
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP-----YGCGVCGKKFKMKHHL 46

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 7e-04
 Identities = 17/44 (38%), Positives = 21/44 (47%)

Query: 165 KFLTSLFSHQVHMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVH 208
           K  T       HM  H G RP+ C VC K+F  K  L  H ++H
Sbjct: 10  KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 8e-04
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 239 DKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSFVRDSYLIRHQ 290
           DK + C  C  +FT KSQ   H+  H  +   + C VCG+ F    +L+ H 
Sbjct: 1   DKLYPC-QCGKSFTHKSQRDRHMSMHLGLR-PYGCGVCGKKFKMKHHLVGHM 50

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 45.7 bits (109), Expect = 6e-08
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGER 212
           R F C VC++ F ++  L  H R HT E+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 92  RPYQCEVCNKRFSQKSSLNTHKRIH 116
           R + CEVC + F+++  L  H R H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 8  KPYHCTACDASFCRKPYLEIHMRTHTGER 36
          + + C  C  +F R+ +L+ H R+HT E+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 66 YYCDACDATFTTKQNLEVHMRTHTGER 92
          + C+ C   F  +++L+ H R+HT E+
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 5e-04
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 36 RPFQCVVCLKRFSQKSALNTHKRMH 60
          R F C VC + F+++  L  H R H
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.4 bits (77), Expect = 0.001
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 212 RPYACDICDKRFAVKSYVTSHRWSHVGDK 240
           R + C++C + FA + ++  H  SH  +K
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 183 ERPFQCAVCSKRFTQKSSLNTHKRVHTG 210
           ++PFQC +C + F++   L TH R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 91  ERPYQCEVCNKRFSQKSSLNTHKRIH 116
           ++P+QC +C + FS+   L TH R H
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (89), Expect = 4e-05
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 8  KPYHCTACDASFCRKPYLEIHMRTHTG 34
          KP+ C  C  +F R  +L  H+RTHTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.8 bits (86), Expect = 7e-05
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 35 ERPFQCVVCLKRFSQKSALNTHKRMH 60
          ++PFQC +C++ FS+   L TH R H
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.001
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 211 ERPYACDICDKRFAVKSYVTSHRWSHVG 238
           ++P+ C IC + F+   ++T+H  +H G
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 66 YYCDACDATFTTKQNLEVHMRTHTG 90
          + C  C   F+   +L  H+RTHTG
Sbjct: 4  FQCRICMRNFSRSDHLTTHIRTHTG 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 188 CAVCSKRFTQKSSLNTHKRVHTGERPYACD 217
              C K F  K  L  H ++H+  R Y C+
Sbjct: 6   EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 2e-06
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 68 CDACDATFTTKQNLEVHMRTHTGERPYQCE 97
            AC  +F  K++L+ HM+ H+  R Y CE
Sbjct: 6  EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 11 HCTACDASFCRKPYLEIHMRTHTGERPFQC 40
             AC  SF  K +L+ HM+ H+  R + C
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 7/38 (18%)

Query: 94  YQCE--VCNKRFSQKSSLNTHKRIHINYLHTEDKPYHC 129
           + C    C K F+ K  L  H ++     H++ + Y C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKL-----HSDTRDYIC 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (103), Expect = 4e-07
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 88  HTGERPYQCEVCNKRFSQKSSLNTHKRIH 116
            +G+RP+ C +C   F+ K++   H ++H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 5e-07
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE 211
            +G+RPF C +C   FT K++   H +VHT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.0 bits (91), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 4  HSGNKPYHCTACDASFCRKPYLEIHMRTHTGE 35
           SG +P+ C  C ++F  K     H++ HT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 5e-05
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 32 HTGERPFQCVVCLKRFSQKSALNTHKRMH 60
           +G+RPF C +CL  F+ K+    H ++H
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 5e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 208 HTGERPYACDICDKRFAVKSYVTSHRWSH 236
            +G+RP+ C IC   F  K+    H   H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 6e-07
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHTGER 212
           + F C  C KRF +   L+ H + H  ++
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 5e-06
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 8  KPYHCTACDASFCRKPYLEIHMRTHTGER 36
          K + C  C   F R  +L  H++TH  ++
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 92  RPYQCEVCNKRFSQKSSLNTHKRIH 116
           + + C  C KRF +   L+ H + H
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 66 YYCDACDATFTTKQNLEVHMRTHTGER 92
          + C  C   F    +L  H++TH  ++
Sbjct: 3  FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 36 RPFQCVVCLKRFSQKSALNTHKRMH 60
          + F C  C KRF +   L+ H + H
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTH 25

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 3e-06
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 184 RPFQCAV--CSKRFTQKSSLNTHKRVHTGER 212
           RPF C    C KRFT+   L  HKR HTGE+
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 5e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 8  KPYHCTA--CDASFCRKPYLEIHMRTHTGER 36
          +P+ CT   C   F R   L+ H RTHTGE+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 92  RPYQCEV--CNKRFSQKSSLNTHKRIH 116
           RP+ C    C KRF++   L  HKR H
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 66 YYCDA--CDATFTTKQNLEVHMRTHTGER 92
          + C    C   FT    L+ H RTHTGE+
Sbjct: 3  FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (93), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 184 RPFQC--AVCSKRFTQKSSLNTHKRVHTGE 211
           +P +C    C K +++  +L TH R HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 8  KPYHCT--ACDASFCRKPYLEIHMRTHTGE 35
          KP+ CT   C  S+ R   L+ H+R+HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 92  RPYQC--EVCNKRFSQKSSLNTHKRIH 116
           +P++C  E C K +S+  +L TH R H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 92  RPYQCEVCNKRFSQKSSLNTHKRIH 116
           +PY+C  C K FSQ S L  H+RIH
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 184 RPFQCAVCSKRFTQKSSLNTHKRVHT 209
           +P++C  C K F+Q S L  H+R+HT
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.002
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 36 RPFQCVVCLKRFSQKSALNTHKRMH 60
          +P++C+ C K FSQ S L  H+R+H
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.2 bits (74), Expect = 0.003
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 8  KPYHCTACDASFCRKPYLEIHMRTHT 33
          KPY C  C  +F +   L  H R HT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (91), Expect = 2e-05
 Identities = 7/39 (17%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 176 HMRTHTGERPFQCAVC--SKRFTQKSSLNTHKRVHTGER 212
                  ++ F+C     +K F ++ ++ +H + H  +R
Sbjct: 9   KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 5/41 (12%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 78  KQNLEVHMRTHTGERPYQCEVC--NKRFSQKSSLNTHKRIH 116
           + +++ +++    ++ ++C      K F ++ ++ +H + H
Sbjct: 4   RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (81), Expect = 5e-04
 Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 4  HSGNKPYHCTACDA--SFCRKPYLEIHMRTHTGER 36
             +K + C       +F R+  +  H++TH  +R
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (77), Expect = 0.002
 Identities = 8/45 (17%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 198 KSSLNTHKRVHTGERPYACDICD--KRFAVKSYVTSHRWSHVGDK 240
           + S++ + +    ++ + C      K F  +  + SH  +H+ D+
Sbjct: 4   RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTGE 211
           +RP+ C    C K F +   L  HK+ H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 91  ERPYQCEV--CNKRFSQKSSLNTHKRIH 116
           +RPY C+   C+K F +   L  HK+ H
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 6e-05
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 184 RPFQC--AVCSKRFTQKSSLNTHKRVHTGE 211
           +PFQC    C KRF+   +L TH R+HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 6e-04
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 92  RPYQCEV--CNKRFSQKSSLNTHKRIH 116
           +P+QC    C KRFS   +L TH RIH
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 8  KPYHCT--ACDASFCRKPYLEIHMRTHTGE 35
          KP+ CT   C   F     L  H+R HTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 184 RPFQC--AVCSKRFTQKSSLNTHKRVHTG 210
           RP+ C    C +RF++ + L  H R+HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.0 bits (81), Expect = 3e-04
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 92  RPYQC--EVCNKRFSQKSSLNTHKRIH 116
           RPY C  E C++RFS+ + L  H RIH
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 8  KPYHCT--ACDASFCRKPYLEIHMRTHTG 34
          +PY C   +CD  F R   L  H+R HTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	292
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.78
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.51
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.47
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.43
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.42
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.42
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.41
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.4
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.39
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.36
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.3
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.28
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.27
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.26
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.24
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.24
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.23
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.23
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.21
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.19
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.18
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.17
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.14
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.09
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.0
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.99
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.98
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.94
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.91
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.81
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.79
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.73
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.71
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.71
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.67
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.62
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.61
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.6
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.5
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.47
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.46
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.35
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.26
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.21
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.21
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.21
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.19
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.15
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.1
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.04
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.01
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.99
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.98
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.97
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.91
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.88
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.87
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.85
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.84
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.82
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.8
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.76
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.69
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.67
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.67
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.66
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.65
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.63
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.53
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.4
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.38
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.33
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.33
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.32
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.32
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.27
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.21
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.12
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.12
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.11
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.03
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.99
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.68
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.6
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.54
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.5
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.47
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.41
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.39
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.13
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.34
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.16
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.15
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.04
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.72
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.48
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	94.44
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.01
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.96
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.89
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.87
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.87
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.74
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.51
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	93.49
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.32
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.93
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.58
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.49
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.43
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	92.13
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.99
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	91.09
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.26
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.16
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	88.22
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	86.45
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.11
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	85.6
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	83.56
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	83.36
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	83.05
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	81.73
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	80.93

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.3e-20  Score=107.40  Aligned_cols=51  Identities=33%  Similarity=0.730  Sum_probs=25.1

Q ss_pred             CCccccccccccccchhhhhhhccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +||+|+ ||+.|..+..|..|+++|+|++||.|++||++|.+.++|..|+++
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            444442 444444444444444445555555555555555555555555444

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=6.5e-20  Score=105.44  Aligned_cols=53  Identities=38%  Similarity=0.841  Sum_probs=51.2

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcCCCCccccccccccccchhhhhhhccc
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKRFAVKSYVTSHRWSH  236 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~h  236 (292)
                      |+||.|+ ||++|.....|..|+++|++++||.|++||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 9999999999999999999999999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=4.3e-15  Score=77.11  Aligned_cols=36  Identities=42%  Similarity=0.936  Sum_probs=24.2

Q ss_pred             CCCccccccccccCCchHHHHHHh-hhcCCCCccccc
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKR-VHTGERPYACDI  218 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~C~~  218 (292)
                      ++||+|++||+.|...++|.+|++ +|++++||+|++
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            466777777777777777777754 577777776654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1e-14  Score=75.72  Aligned_cols=37  Identities=32%  Similarity=0.671  Sum_probs=23.7

Q ss_pred             CcceeCCccccccCChhHHHHHhhhhcCCCCCcccCC
Q psy4830         239 DKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNV  275 (292)
Q Consensus       239 ~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~  275 (292)
                      +|||+|++||++|...++|.+|++..|++++||+|++
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            5666666666666666666666654456666666654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.7e-15  Score=77.69  Aligned_cols=32  Identities=25%  Similarity=0.663  Sum_probs=15.7

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhh
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      |+++|++++||.|++||++|...++|..|+++
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~   34 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT   34 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCcc
Confidence            44444444444444444444444444444444

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.1e-14  Score=74.15  Aligned_cols=36  Identities=36%  Similarity=0.750  Sum_probs=21.6

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      |+++|++++||.|++||++|...++|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            455566666666666666666666666666666553

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.42  E-value=3.9e-14  Score=73.18  Aligned_cols=33  Identities=30%  Similarity=0.704  Sum_probs=26.4

Q ss_pred             hhccccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         232 HRWSHVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       232 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |.++|+||+||+|++|+++|.++++|.+|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            667788888888888888888888888888775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.6e-14  Score=71.84  Aligned_cols=34  Identities=35%  Similarity=0.784  Sum_probs=29.9

Q ss_pred             ccccCCcceeCCccccccCChhHHHHHhhhhcCC
Q psy4830         234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHTV  267 (292)
Q Consensus       234 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~~  267 (292)
                      ++|+||+||+|++|+++|+++++|..|++.+|+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4789999999999999999999999998877764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=6.7e-14  Score=71.72  Aligned_cols=33  Identities=33%  Similarity=0.839  Sum_probs=27.8

Q ss_pred             ccccCCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         234 WSHVGDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       234 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      ++|+|++||+|++||++|...++|..|+++|+.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            478888888888888888888888888888753

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=3.1e-14  Score=70.86  Aligned_cols=29  Identities=41%  Similarity=0.936  Sum_probs=14.1

Q ss_pred             ccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       236 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |+|++||+|.+||++|.+.++|..|+++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhcccc
Confidence            44444444444444444444444444443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=9.8e-14  Score=69.01  Aligned_cols=32  Identities=53%  Similarity=1.071  Sum_probs=19.5

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      |++++||+|.+||++|...++|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55666666666666666666666666666553

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=7.3e-14  Score=72.14  Aligned_cols=34  Identities=35%  Similarity=0.784  Sum_probs=18.4

Q ss_pred             hcccCCCCCCccccccccccCCchHHHHHHhhhc
Q psy4830         176 HMRTHTGERPFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       176 h~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      |.++|++|+||+|++|+++|..+++|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3445555555555555555555555555555553

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.1e-13  Score=68.73  Aligned_cols=34  Identities=35%  Similarity=0.876  Sum_probs=29.5

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      |+|+|++||+|.+|++.|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5788999999999999999999999998888765

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=6.9e-13  Score=66.84  Aligned_cols=29  Identities=41%  Similarity=0.825  Sum_probs=23.8

Q ss_pred             ccCCcceeCCccccccCChhHHHHHhhhh
Q psy4830         236 HVGDKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       236 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |+|++||+|++|++.|.++++|.+|+++|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            67888888888888888888888888875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=1e-12  Score=66.24  Aligned_cols=32  Identities=41%  Similarity=0.843  Sum_probs=22.3

Q ss_pred             CCCCCCccccccccccCCchHHHHHHhhhcCC
Q psy4830         180 HTGERPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       180 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      |+|++||+|++|++.|..+++|.+|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            46677777777777777777777777777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.27  E-value=6.4e-13  Score=64.09  Aligned_cols=27  Identities=41%  Similarity=0.879  Sum_probs=11.3

Q ss_pred             CccccccccccCCchHHHHHHhhhcCC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ||+|++||++|...+.|.+|+++|+||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            344444444444444444444444433

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.26  E-value=1.4e-12  Score=62.92  Aligned_cols=29  Identities=31%  Similarity=0.769  Sum_probs=27.9

Q ss_pred             CCccccccccccccchhhhhhhccccCCc
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWSHVGDK  240 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  240 (292)
                      +||+|++||++|...+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.5e-12  Score=61.97  Aligned_cols=28  Identities=46%  Similarity=1.069  Sum_probs=20.4

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcC
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~  210 (292)
                      |+||+|++|+++|...++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677777777777777777777777765

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.6e-12  Score=61.76  Aligned_cols=29  Identities=31%  Similarity=0.791  Sum_probs=17.4

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCCC
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      +||.|++||++|..++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35666666666666666666666666553

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.5e-12  Score=62.59  Aligned_cols=28  Identities=29%  Similarity=0.590  Sum_probs=15.3

Q ss_pred             CCccccccccccccchhhhhhhccccCC
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      +||.|++||++|..++.|..|+++|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3555555555555555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=2.8e-13  Score=73.70  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=19.4

Q ss_pred             hhhhhhccccCCcceeCCc--cccccCChhHHHHHhhhh
Q psy4830         228 YVTSHRWSHVGDKPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       228 ~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      .|..|+. |+|++||.|++  |+++|...++|..|+++|
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~H   43 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccc
Confidence            3444442 55555555544  555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.6e-12  Score=64.99  Aligned_cols=34  Identities=35%  Similarity=0.776  Sum_probs=26.9

Q ss_pred             ccccCCCCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           2 KLHSGNKPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         2 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      ++|+|++||+|++|++.|...+.|.+|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5788888888888888888888888887655443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4.3e-12  Score=64.46  Aligned_cols=32  Identities=38%  Similarity=0.900  Sum_probs=24.2

Q ss_pred             ccccc--cccccCCchHHHHHHhhhcCCCCcccc
Q psy4830         186 FQCAV--CSKRFTQKSSLNTHKRVHTGERPYACD  217 (292)
Q Consensus       186 ~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~  217 (292)
                      |.|+.  ||++|..++.|.+|+++|+|++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56765  777777777777777777777777775

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=5.3e-12  Score=59.99  Aligned_cols=26  Identities=38%  Similarity=0.902  Sum_probs=19.8

Q ss_pred             CcceeCCccccccCChhHHHHHhhhh
Q psy4830         239 DKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       239 ~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ||||+|++|+++|.++++|.+|+++|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCc
Confidence            56777777777777777777777775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.17  E-value=4.1e-12  Score=69.00  Aligned_cols=42  Identities=21%  Similarity=0.532  Sum_probs=37.9

Q ss_pred             chHHHHHHhhhcCCCCccccc--cccccccchhhhhhhccccCCc
Q psy4830         198 KSSLNTHKRVHTGERPYACDI--CDKRFAVKSYVTSHRWSHVGDK  240 (292)
Q Consensus       198 ~~~L~~H~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~  240 (292)
                      ++.|..|+. |.+++||+|++  |+++|...+.|..|+++|+||+
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456778885 99999999987  9999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=3.3e-12  Score=64.91  Aligned_cols=27  Identities=26%  Similarity=0.524  Sum_probs=13.1

Q ss_pred             cccccccchhhhhhhccccCCcceeCC
Q psy4830         219 CDKRFAVKSYVTSHRWSHVGDKPFGCT  245 (292)
Q Consensus       219 C~k~f~~~~~L~~H~~~h~~~~~~~C~  245 (292)
                      ||++|.+++.|+.|+++|+|++||.|+
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            444444444444444444444444443

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.3e-11  Score=56.14  Aligned_cols=25  Identities=36%  Similarity=0.773  Sum_probs=21.2

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |||+|+.|||+|..+++|.+|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            5888888888888888888888886

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.1e-11  Score=56.26  Aligned_cols=26  Identities=46%  Similarity=1.023  Sum_probs=19.7

Q ss_pred             CCccccccccccCCchHHHHHHhhhc
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      +||+|.+||++|...++|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            47777777777777777777777774

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9.9e-11  Score=56.47  Aligned_cols=28  Identities=43%  Similarity=0.939  Sum_probs=16.6

Q ss_pred             CCccccc--cccccCCchHHHHHHhhhcCC
Q psy4830         184 RPFQCAV--CSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       184 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +||.|++  ||++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3566655  666666666666666666553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=6.4e-11  Score=57.15  Aligned_cols=24  Identities=33%  Similarity=0.807  Sum_probs=12.7

Q ss_pred             ceeCCc--cccccCChhHHHHHhhhh
Q psy4830         241 PFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       241 ~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      ||.|++  |+++|.+.++|.+|+++|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~H   27 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSH   27 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcC
Confidence            455544  555555555555555553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=9.9e-11  Score=56.61  Aligned_cols=28  Identities=54%  Similarity=1.120  Sum_probs=19.4

Q ss_pred             CCccccc--cccccCCchHHHHHHhhhcCC
Q psy4830         184 RPFQCAV--CSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       184 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +||.|++  ||++|...++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677765  777777777777777777664

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.2e-10  Score=55.88  Aligned_cols=27  Identities=59%  Similarity=1.150  Sum_probs=14.3

Q ss_pred             Ccccc--ccccccCCchHHHHHHhhhcCC
Q psy4830         185 PFQCA--VCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       185 ~~~C~--~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ||.|+  .||++|...++|.+|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45553  3555555555555555555554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=6.4e-11  Score=57.29  Aligned_cols=25  Identities=40%  Similarity=0.798  Sum_probs=17.2

Q ss_pred             cceeCCc--cccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|++  ||++|.+.++|++|+++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~H   27 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIH   27 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCcccccc
Confidence            4677765  777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.5e-10  Score=55.66  Aligned_cols=27  Identities=33%  Similarity=0.880  Sum_probs=13.6

Q ss_pred             Ccccc--ccccccccchhhhhhhccccCC
Q psy4830         213 PYACD--ICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       213 ~~~C~--~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      ||.|+  .||++|...+.|..|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45553  3555555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.81  E-value=1.8e-09  Score=52.79  Aligned_cols=28  Identities=36%  Similarity=0.842  Sum_probs=17.8

Q ss_pred             CCCccccc--cccccCCchHHHHHHhhhcC
Q psy4830         183 ERPFQCAV--CSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       183 ~~~~~C~~--C~k~f~~~~~L~~H~~~h~~  210 (292)
                      |+||.|++  |+++|...++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            35666665  66666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1.1e-09  Score=52.26  Aligned_cols=27  Identities=48%  Similarity=1.166  Sum_probs=18.2

Q ss_pred             CCccccc--cccccCCchHHHHHHhhhcC
Q psy4830         184 RPFQCAV--CSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       184 ~~~~C~~--C~k~f~~~~~L~~H~~~h~~  210 (292)
                      +||.|++  |+++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666765  77777777777777776664

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=2e-09  Score=52.62  Aligned_cols=26  Identities=27%  Similarity=0.818  Sum_probs=18.1

Q ss_pred             CcceeCCc--cccccCChhHHHHHhhhh
Q psy4830         239 DKPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       239 ~~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      |+||.|++  |+++|++.++|.+|+++|
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            46677766  777777777777777765

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=8.3e-10  Score=52.65  Aligned_cols=25  Identities=28%  Similarity=0.878  Sum_probs=18.3

Q ss_pred             cceeCCc--cccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      |||.|++  |+++|.+.++|.+|+++|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~H   27 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIH   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCcc
Confidence            4677766  777777777777777775

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.3e-09  Score=46.07  Aligned_cols=21  Identities=29%  Similarity=0.713  Sum_probs=9.5

Q ss_pred             eCCccccccCChhHHHHHhhh
Q psy4830         243 GCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       243 ~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      +|++|++.|+.+..|+.|++.
T Consensus         3 kc~~c~kcfsrkdklk~hmr~   23 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRC   23 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGG
T ss_pred             ccchhhhHhcchhHHHHHhhc
Confidence            444444444444444444444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.1e-09  Score=50.55  Aligned_cols=25  Identities=28%  Similarity=0.765  Sum_probs=19.6

Q ss_pred             cceeCCc--cccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|++  ||++|++.++|++|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            5778876  888888888888888775

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.6e-09  Score=49.75  Aligned_cols=26  Identities=38%  Similarity=0.942  Sum_probs=15.7

Q ss_pred             CCccccc--cccccCCchHHHHHHhhhc
Q psy4830         184 RPFQCAV--CSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       184 ~~~~C~~--C~k~f~~~~~L~~H~~~h~  209 (292)
                      +||.|+.  ||++|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3566655  6666666666666666653

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=1.1e-08  Score=46.10  Aligned_cols=26  Identities=31%  Similarity=1.005  Sum_probs=16.1

Q ss_pred             CCCccccccccccCCchHHHHHHhhh
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      |+||.|++||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            35666666666666666666666655

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=44.45  Aligned_cols=25  Identities=32%  Similarity=0.717  Sum_probs=13.4

Q ss_pred             ccccccccccccchhhhhhhccccC
Q psy4830         214 YACDICDKRFAVKSYVTSHRWSHVG  238 (292)
Q Consensus       214 ~~C~~C~k~f~~~~~L~~H~~~h~~  238 (292)
                      ++|++|++.|+.+..|+.|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4455555555555555555555543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=7e-09  Score=48.51  Aligned_cols=28  Identities=46%  Similarity=0.956  Sum_probs=12.8

Q ss_pred             cccccccccCCchHHHHHHhhhcCCCCc
Q psy4830         187 QCAVCSKRFTQKSSLNTHKRVHTGERPY  214 (292)
Q Consensus       187 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~  214 (292)
                      .|+.||+.|.....|.+|...|++++||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3444444444444444444444444443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=1.7e-08  Score=45.42  Aligned_cols=26  Identities=31%  Similarity=0.713  Sum_probs=19.1

Q ss_pred             CcceeCCccccccCChhHHHHHhhhh
Q psy4830         239 DKPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       239 ~~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |+||.|.+||+.|+.....++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46777777777777777777777765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=3.3e-08  Score=46.21  Aligned_cols=32  Identities=38%  Similarity=0.781  Sum_probs=29.5

Q ss_pred             CCccccccccccccchhhhhhhccccCCccee
Q psy4830         212 RPYACDICDKRFAVKSYVTSHRWSHVGDKPFG  243 (292)
Q Consensus       212 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~  243 (292)
                      +...|++||+.|.....|.+|..+|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45689999999999999999999999999983

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2e-08  Score=45.81  Aligned_cols=23  Identities=35%  Similarity=0.946  Sum_probs=8.7

Q ss_pred             ceeCCccccccCChhHHHHHhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      ||.|++|+..|..+..+.-|.+.
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHH
T ss_pred             CcccchHHHHhhccccceEeeec
Confidence            33333333333333333333333

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=4.9e-08  Score=44.52  Aligned_cols=28  Identities=43%  Similarity=0.992  Sum_probs=16.9

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcC
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~  210 (292)
                      |+||.|++|+..|..+..+..|.+.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3556666666666666666666666654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=7.9e-08  Score=42.79  Aligned_cols=23  Identities=43%  Similarity=0.859  Sum_probs=8.5

Q ss_pred             ceeCCccccccCChhHHHHHhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      ||+|..|...-.+.+.|..|++.
T Consensus         3 pfkcqlcsy~srnssqltvhlr~   25 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLRS   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTT
T ss_pred             cceeeecccccCCchheEEeeec
Confidence            33333333333333333333333

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.7e-07  Score=41.04  Aligned_cols=27  Identities=44%  Similarity=0.886  Sum_probs=14.1

Q ss_pred             CCccccccccccCCchHHHHHHhhhcC
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~  210 (292)
                      +||+|..|...-.+.+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455555555555555555555555544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=5.7e-07  Score=40.46  Aligned_cols=29  Identities=24%  Similarity=0.612  Sum_probs=24.8

Q ss_pred             cceeCCccccccCChhHHHHHhhhhcCCC
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTHHTVG  268 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~hh~~~  268 (292)
                      +||.|..|...-...++|+.|+++.|+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            58899999999999999999998887654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4.3e-07  Score=40.18  Aligned_cols=24  Identities=50%  Similarity=0.895  Sum_probs=14.1

Q ss_pred             cccccccccCCchHHHHHHhhhcC
Q psy4830         187 QCAVCSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       187 ~C~~C~k~f~~~~~L~~H~~~h~~  210 (292)
                      .|..||+.|...+.|++|..+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455566666666666666555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3e-07  Score=40.71  Aligned_cols=21  Identities=24%  Similarity=0.483  Sum_probs=10.7

Q ss_pred             eCCccccccCChhHHHHHhhh
Q psy4830         243 GCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       243 ~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      .|..||+.|...+.|++|..+
T Consensus         4 vc~ecgkaf~essklkrh~lv   24 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLV   24 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGG
T ss_pred             hHHHHhHHHHHHHHHHHHhhc
Confidence            455555555555555555544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=2.4e-07  Score=40.34  Aligned_cols=24  Identities=38%  Similarity=0.873  Sum_probs=11.1

Q ss_pred             ccccccccccchhhhhhhccccCC
Q psy4830         216 CDICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       216 C~~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      |+.|.+.|.++..|+.|-+.|+|+
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            444444444444444444444443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=7.3e-07  Score=40.67  Aligned_cols=26  Identities=35%  Similarity=0.738  Sum_probs=20.1

Q ss_pred             cceeCCc--cccccCChhHHHHHhhhhc
Q psy4830         240 KPFGCTS--CHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       240 ~~~~C~~--C~~~f~~~~~L~~H~~~hh  265 (292)
                      +||.|.+  |++++...++|..|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5777866  8888888888888887765

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.2e-06  Score=39.23  Aligned_cols=27  Identities=37%  Similarity=0.639  Sum_probs=19.5

Q ss_pred             ccccccccccCCchHHHHHHhhhcCCC
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      |.|+.||......+-|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            667777777777777777777777653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1e-06  Score=39.47  Aligned_cols=26  Identities=27%  Similarity=0.493  Sum_probs=15.7

Q ss_pred             ccccccccccccchhhhhhhccccCC
Q psy4830         214 YACDICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       214 ~~C~~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      |.|+.||......+.|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            55666666666666666666666554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.7e-06  Score=39.45  Aligned_cols=27  Identities=33%  Similarity=0.734  Sum_probs=19.8

Q ss_pred             CCccCCc--chhhcCChhHHHHHHhhhcC
Q psy4830           8 KPYHCTA--CDASFCRKPYLEIHMRTHTG   34 (292)
Q Consensus         8 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   34 (292)
                      +||.|.+  |++.+...++|+.|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777766  77888888888888776553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.99  E-value=2.5e-06  Score=37.10  Aligned_cols=26  Identities=46%  Similarity=0.922  Sum_probs=24.6

Q ss_pred             cccccccccCCchHHHHHHhhhcCCC
Q psy4830         187 QCAVCSKRFTQKSSLNTHKRVHTGER  212 (292)
Q Consensus       187 ~C~~C~k~f~~~~~L~~H~~~h~~~~  212 (292)
                      +|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999975

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.3e-06  Score=42.29  Aligned_cols=26  Identities=31%  Similarity=0.703  Sum_probs=21.5

Q ss_pred             cCCcceeCCccccccCChhHHHHHhh
Q psy4830         237 VGDKPFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       237 ~~~~~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      +|-|||.|.+|+|.|..+.++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46788888888888888888888854

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.97  E-value=2.8e-06  Score=36.28  Aligned_cols=23  Identities=43%  Similarity=1.102  Sum_probs=14.6

Q ss_pred             ccccccccccCCchHHHHHHhhh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      |+|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666665

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=3.8e-06  Score=37.45  Aligned_cols=29  Identities=38%  Similarity=0.864  Sum_probs=24.2

Q ss_pred             CCCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           7 NKPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         7 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      +..|.|..|...|..+.+|+.||.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45688889999998888888898888874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.88  E-value=2.7e-06  Score=39.12  Aligned_cols=23  Identities=43%  Similarity=0.881  Sum_probs=14.4

Q ss_pred             CcccCCCCCCccChHHHHhhhcC
Q psy4830         270 NHVCNVCGRSFVRDSYLIRHQNK  292 (292)
Q Consensus       270 ~~~C~~C~~~f~~~~~l~~H~rk  292 (292)
                      ||.|.+|++.|++++-|.+|+.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            46666666666666666666544

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.7e-06  Score=36.66  Aligned_cols=25  Identities=36%  Similarity=0.824  Sum_probs=22.1

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      +||+|..|+..-...++|+.|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            6889999999999999999999886

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.85  E-value=6e-06  Score=36.77  Aligned_cols=25  Identities=28%  Similarity=0.691  Sum_probs=19.1

Q ss_pred             cceeCCc--cccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      .||+|+.  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4777765  888888888888887765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=4.5e-06  Score=37.28  Aligned_cols=24  Identities=29%  Similarity=0.930  Sum_probs=19.7

Q ss_pred             ceeCCccccccCChhHHHHHhhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ||.|..|+.+|.++.+|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            688888888888888888888753

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.82  E-value=5.4e-06  Score=35.41  Aligned_cols=23  Identities=35%  Similarity=0.755  Sum_probs=12.8

Q ss_pred             eeCCccccccCChhHHHHHhhhh
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=6.9e-06  Score=36.12  Aligned_cols=26  Identities=38%  Similarity=0.848  Sum_probs=19.5

Q ss_pred             CCccCCcchhhcCChhHHHHHHhhhc
Q psy4830           8 KPYHCTACDASFCRKPYLEIHMRTHT   33 (292)
Q Consensus         8 ~~~~C~~C~~~f~~~~~l~~H~~~h~   33 (292)
                      +||+|..|+..-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57777777777777777777777764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=6.9e-06  Score=40.59  Aligned_cols=24  Identities=25%  Similarity=0.473  Sum_probs=22.2

Q ss_pred             CCCCcccCCCCCCccChHHHHhhh
Q psy4830         267 VGANHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       267 ~~~~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      +-+||.|.+|++.|.+.+++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            568999999999999999999985

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=1.7e-05  Score=35.33  Aligned_cols=26  Identities=38%  Similarity=0.813  Sum_probs=14.9

Q ss_pred             CccccccccccCCchHHHHHHhhhcC
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~~  210 (292)
                      .|.|..|...|.....|+.||..|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            35555555555555555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.67  E-value=1.5e-05  Score=39.26  Aligned_cols=28  Identities=29%  Similarity=0.769  Sum_probs=18.8

Q ss_pred             CCccccccccccCCchHHHHHHhhhcCC
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      +.|+|.+|++.|.+..+|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4567777777777777777777766544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.67  E-value=1.4e-05  Score=35.59  Aligned_cols=25  Identities=44%  Similarity=0.987  Sum_probs=17.1

Q ss_pred             CCccccc--cccccCCchHHHHHHhhh
Q psy4830         184 RPFQCAV--CSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       184 ~~~~C~~--C~k~f~~~~~L~~H~~~h  208 (292)
                      .||.|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566754  777777777777777665

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.66  E-value=1.7e-05  Score=36.43  Aligned_cols=27  Identities=26%  Similarity=0.605  Sum_probs=20.9

Q ss_pred             ceeCCccccccCChhHHHHHhhhhcCC
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHHTV  267 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh~~  267 (292)
                      ||.|.+|++.|+.+.-|.+|...-|++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            678888888888888888887665554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=9.3e-06  Score=36.27  Aligned_cols=22  Identities=27%  Similarity=0.504  Sum_probs=20.9

Q ss_pred             CcccCCCCCCccChHHHHhhhc
Q psy4830         270 NHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       270 ~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      ||.|..|..+|.++.+|..||.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            6899999999999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.63  E-value=1.8e-05  Score=38.97  Aligned_cols=28  Identities=29%  Similarity=0.613  Sum_probs=17.4

Q ss_pred             CCccCCcchhhcCChhHHHHHHhhhcCC
Q psy4830           8 KPYHCTACDASFCRKPYLEIHMRTHTGE   35 (292)
Q Consensus         8 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   35 (292)
                      +.|+|.+|++.|.+...|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4566666666666666666666666443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=3.2e-05  Score=34.59  Aligned_cols=27  Identities=26%  Similarity=0.714  Sum_probs=20.7

Q ss_pred             cceeCCccccccCChhHHHHHhhhhcC
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      +||+|..|..-..+.++|..|++..|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            478888888888888888888876654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=2.4e-05  Score=35.02  Aligned_cols=24  Identities=29%  Similarity=0.441  Sum_probs=22.2

Q ss_pred             CCcccCCCCCCccChHHHHhhhcC
Q psy4830         269 ANHVCNVCGRSFVRDSYLIRHQNK  292 (292)
Q Consensus       269 ~~~~C~~C~~~f~~~~~l~~H~rk  292 (292)
                      +||+|+.|...-.+.++|..|++|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            489999999999999999999875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=2.5e-05  Score=35.84  Aligned_cols=21  Identities=33%  Similarity=0.702  Sum_probs=11.2

Q ss_pred             ceeCCc--cccccCChhHHHHHh
Q psy4830         241 PFGCTS--CHLTFTSKSQFAVHL  261 (292)
Q Consensus       241 ~~~C~~--C~~~f~~~~~L~~H~  261 (292)
                      ||.|++  |.|.|++.++-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            455544  555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=4.2e-05  Score=35.07  Aligned_cols=25  Identities=40%  Similarity=0.883  Sum_probs=12.4

Q ss_pred             Cccccc--cccccCCchHHHHHH-hhhc
Q psy4830         185 PFQCAV--CSKRFTQKSSLNTHK-RVHT  209 (292)
Q Consensus       185 ~~~C~~--C~k~f~~~~~L~~H~-~~h~  209 (292)
                      ||.|++  |.|.|.+.+.-..|+ |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            455544  555555555555553 4443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=2.9e-05  Score=33.07  Aligned_cols=21  Identities=33%  Similarity=0.903  Sum_probs=11.0

Q ss_pred             ceeCCccccccCChhHHHHHh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHL  261 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~  261 (292)
                      ||+|..|...|.++.+|..||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=8.8e-05  Score=36.12  Aligned_cols=27  Identities=44%  Similarity=0.866  Sum_probs=21.0

Q ss_pred             CCcceeC--CccccccCChhHHHHHhhhh
Q psy4830         238 GDKPFGC--TSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       238 ~~~~~~C--~~C~~~f~~~~~L~~H~~~h  264 (292)
                      .++||.|  +-|+.+|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            4678888  55888888888888887776

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=0.00013  Score=32.70  Aligned_cols=25  Identities=32%  Similarity=0.671  Sum_probs=15.2

Q ss_pred             CCccccccccccCCchHHHHHHhhh
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h  208 (292)
                      +||+|..|...-...++|..|+++-
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            3566666666666666666666543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=0.0001  Score=32.86  Aligned_cols=27  Identities=48%  Similarity=0.883  Sum_probs=17.4

Q ss_pred             Cccccc--cccccCCchHHHHHHhhhcCC
Q psy4830         185 PFQCAV--CSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       185 ~~~C~~--C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      ||.|..  |.+.|.+.-.|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            566643  667777777777776666653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=0.00014  Score=30.93  Aligned_cols=22  Identities=23%  Similarity=0.520  Sum_probs=12.7

Q ss_pred             CCcccCCCCCCccChHHHHhhh
Q psy4830         269 ANHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       269 ~~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      .||+|..|.+.|..+.+|..||
T Consensus         1 mpykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHH
Confidence            0455666666666666666665

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00013  Score=31.91  Aligned_cols=22  Identities=27%  Similarity=0.626  Sum_probs=14.2

Q ss_pred             ceeCCccccccCChhHHHHHhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLR  262 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~  262 (292)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4666666666666666666643

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.12  E-value=5.5e-05  Score=33.76  Aligned_cols=25  Identities=44%  Similarity=0.774  Sum_probs=16.0

Q ss_pred             cceeCCc--cccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTS--CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~--C~~~f~~~~~L~~H~~~h  264 (292)
                      +||.|..  |.|.|.+.-.|.+|..+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~th   27 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTH   27 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhccc
Confidence            3566643  667777766777766664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.12  E-value=0.00018  Score=30.69  Aligned_cols=24  Identities=29%  Similarity=0.711  Sum_probs=18.8

Q ss_pred             eeCCccccccCChhHHHHHhhhhc
Q psy4830         242 FGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       242 ~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      |.|+.|-+.|..+.++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888877644

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.00017  Score=31.48  Aligned_cols=21  Identities=29%  Similarity=0.809  Sum_probs=19.8

Q ss_pred             CcccCCCCCCccChHHHHhhh
Q psy4830         270 NHVCNVCGRSFVRDSYLIRHQ  290 (292)
Q Consensus       270 ~~~C~~C~~~f~~~~~l~~H~  290 (292)
                      ||+|..||+.|-++.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            699999999999999999995

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00022  Score=34.67  Aligned_cols=27  Identities=41%  Similarity=0.918  Sum_probs=19.9

Q ss_pred             CCCccc--cccccccCCchHHHHHHhhhc
Q psy4830         183 ERPFQC--AVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       183 ~~~~~C--~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            677777  457778888877777777664

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00029  Score=30.96  Aligned_cols=25  Identities=36%  Similarity=0.770  Sum_probs=18.2

Q ss_pred             CccccccccccCCchHHHHHHhhhc
Q psy4830         185 PFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       185 ~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      |-+|+.|..+.+++..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3467777777777777777777774

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00073  Score=29.55  Aligned_cols=25  Identities=40%  Similarity=0.834  Sum_probs=19.8

Q ss_pred             ceeCCccccccCChhHHHHHhhhhc
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      .|.|+.|+-....+++|..|++.-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3788888888888888888887654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00087  Score=29.40  Aligned_cols=24  Identities=33%  Similarity=0.742  Sum_probs=18.0

Q ss_pred             ceeCCccccccCChhHHHHHhhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |-+|+.|..+.+++..|+.|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            456777777777777787777775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00033  Score=35.83  Aligned_cols=24  Identities=25%  Similarity=0.544  Sum_probs=14.3

Q ss_pred             Cccccccccccccchhhhhhhccc
Q psy4830         213 PYACDICDKRFAVKSYVTSHRWSH  236 (292)
Q Consensus       213 ~~~C~~C~k~f~~~~~L~~H~~~h  236 (292)
                      .|.|.+|||.|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            355666666666666666665544

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.50  E-value=0.00051  Score=29.27  Aligned_cols=21  Identities=24%  Similarity=0.542  Sum_probs=19.5

Q ss_pred             cccCCCCCCccChHHHHhhhc
Q psy4830         271 HVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       271 ~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      |.|++|-+.|++++++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            789999999999999999964

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.00079  Score=34.40  Aligned_cols=26  Identities=31%  Similarity=0.643  Sum_probs=23.3

Q ss_pred             CCccccccccccCCchHHHHHHhhhc
Q psy4830         184 RPFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       184 ~~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      ..|.|..|||.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999998774

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00095  Score=31.19  Aligned_cols=20  Identities=40%  Similarity=0.984  Sum_probs=13.6

Q ss_pred             CcccCCCCCCccChHHHHhh
Q psy4830         270 NHVCNVCGRSFVRDSYLIRH  289 (292)
Q Consensus       270 ~~~C~~C~~~f~~~~~l~~H  289 (292)
                      .|.|..||+.|+++..|.+|
T Consensus         4 afvcskcgktftrrntm~rh   23 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARH   23 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHH
T ss_pred             eeeecccccchhcchHHHHH
Confidence            46677777777777666666

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00092  Score=31.23  Aligned_cols=24  Identities=33%  Similarity=0.642  Sum_probs=21.4

Q ss_pred             ceeCCccccccCChhHHHHHhhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      .|.|..|||+|..+..+.+|-..-
T Consensus         4 afvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeeecccccchhcchHHHHHhhhc
Confidence            589999999999999999997664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0014  Score=28.66  Aligned_cols=22  Identities=27%  Similarity=0.389  Sum_probs=20.7

Q ss_pred             CcccCCCCCCccChHHHHhhhc
Q psy4830         270 NHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       270 ~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      .|+|+.|+-...++++|..|+|
T Consensus         2 k~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhh
Confidence            5899999999999999999987

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0051  Score=29.12  Aligned_cols=24  Identities=38%  Similarity=0.559  Sum_probs=17.9

Q ss_pred             ccccccccCCchHHHHHHhhhcCC
Q psy4830         188 CAVCSKRFTQKSSLNTHKRVHTGE  211 (292)
Q Consensus       188 C~~C~k~f~~~~~L~~H~~~h~~~  211 (292)
                      |+-=++.|.....|..|+|+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333356688888899999988875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.16  E-value=0.006  Score=28.11  Aligned_cols=21  Identities=33%  Similarity=0.722  Sum_probs=16.4

Q ss_pred             ceeCCccccccCChhHHHHHh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHL  261 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~  261 (292)
                      .|.|+-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            477888888888888888775

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.15  E-value=0.0029  Score=29.98  Aligned_cols=21  Identities=19%  Similarity=0.311  Sum_probs=15.2

Q ss_pred             cccccccchhhhhhhccccCC
Q psy4830         219 CDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       219 C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      =++.|.....|..|+++|+||
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            345577778888888888775

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.04  E-value=0.011  Score=27.26  Aligned_cols=24  Identities=38%  Similarity=0.564  Sum_probs=21.4

Q ss_pred             CCCcccCCCCCCccChHHHHhhhc
Q psy4830         268 GANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       268 ~~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      ...|.|+-||-.|++.+.|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            356999999999999999999973

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.72  E-value=0.013  Score=27.35  Aligned_cols=29  Identities=31%  Similarity=0.689  Sum_probs=23.9

Q ss_pred             CCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         238 GDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       238 ~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      |+..|.|.+|.+++...+++-+|.-+-|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            55678999999999999999999877654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.48  E-value=0.0052  Score=27.74  Aligned_cols=20  Identities=30%  Similarity=0.634  Sum_probs=8.7

Q ss_pred             cccccCCchHHHHHHhhhcC
Q psy4830         191 CSKRFTQKSSLNTHKRVHTG  210 (292)
Q Consensus       191 C~k~f~~~~~L~~H~~~h~~  210 (292)
                      |+..|.....|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            44444444444444444443

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.44  E-value=0.012  Score=28.92  Aligned_cols=26  Identities=35%  Similarity=0.655  Sum_probs=14.2

Q ss_pred             cceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCC
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRS  279 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~  279 (292)
                      +.|.|++||..+              .++.|-.|++|+..
T Consensus         4 ~~~~C~vCG~i~--------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYTA--------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCEE--------------ESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCEe--------------cCCCCCcCCCCCCc
Confidence            346666666543              22345566666643

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.01  E-value=0.012  Score=32.69  Aligned_cols=38  Identities=21%  Similarity=0.477  Sum_probs=23.9

Q ss_pred             CcceeCCccccccCChhHHHHHhhhhcCCCCCcccCCCCCCc
Q psy4830         239 DKPFGCTSCHLTFTSKSQFAVHLRTHHTVGANHVCNVCGRSF  280 (292)
Q Consensus       239 ~~~~~C~~C~~~f~~~~~L~~H~~~hh~~~~~~~C~~C~~~f  280 (292)
                      ...|.|+.|+++|+....+..   . ......|.|.+|+-..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~-d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---F-DPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---E-ETTTTEEBCSSSCCBC
T ss_pred             CCceECCCCCCCcchhhHHHh---c-CcCCCeEEecCCCCEE
Confidence            456888888888876555443   1 1234568888887543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.0077  Score=34.17  Aligned_cols=23  Identities=22%  Similarity=0.573  Sum_probs=17.1

Q ss_pred             ceeCCccccccCChhHHHHHhhh
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRT  263 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~  263 (292)
                      .|.|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            47777788888888777777654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.89  E-value=0.025  Score=28.63  Aligned_cols=30  Identities=20%  Similarity=0.442  Sum_probs=24.8

Q ss_pred             cCCcceeCCccccccCChhHHHHHhhhhcC
Q psy4830         237 VGDKPFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       237 ~~~~~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      ..+.|-.|++|+....+..+|.+|+..-|-
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            356788999999999999999999876553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.0075  Score=34.21  Aligned_cols=23  Identities=30%  Similarity=0.590  Sum_probs=21.1

Q ss_pred             CCcccCCCCCCccChHHHHhhhc
Q psy4830         269 ANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       269 ~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      ..|.|..|++.|.+...|..|++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            45889999999999999999986

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.021  Score=24.97  Aligned_cols=18  Identities=39%  Similarity=0.685  Sum_probs=14.1

Q ss_pred             cccccCChhHHHHHhhhh
Q psy4830         247 CHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       247 C~~~f~~~~~L~~H~~~h  264 (292)
                      |+|.|...+.+..|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            788888888888887765

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.019  Score=25.16  Aligned_cols=19  Identities=32%  Similarity=0.644  Sum_probs=16.6

Q ss_pred             ccccccCCchHHHHHHhhh
Q psy4830         190 VCSKRFTQKSSLNTHKRVH  208 (292)
Q Consensus       190 ~C~k~f~~~~~L~~H~~~h  208 (292)
                      -|++.|...+.++.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3899999999999998877

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.035  Score=24.48  Aligned_cols=26  Identities=23%  Similarity=0.501  Sum_probs=19.0

Q ss_pred             ceeCCccccccCChhHHHHHhhhhcC
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHHT  266 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh~  266 (292)
                      .|.|..||+...+...++-|+...|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            36788888888888888887766553

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.49  E-value=0.013  Score=28.60  Aligned_cols=9  Identities=22%  Similarity=0.430  Sum_probs=4.1

Q ss_pred             ceeCCcccc
Q psy4830         241 PFGCTSCHL  249 (292)
Q Consensus       241 ~~~C~~C~~  249 (292)
                      .|.|++||.
T Consensus         5 ~~vC~vCGy   13 (36)
T d1yuza2           5 FHLCPICGY   13 (36)
T ss_dssp             EEECSSSCC
T ss_pred             EEECCCCCC
Confidence            344444443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.32  E-value=0.034  Score=25.02  Aligned_cols=28  Identities=21%  Similarity=0.535  Sum_probs=24.3

Q ss_pred             CCcccc--ccccccccchhhhhhhccccCC
Q psy4830         212 RPYACD--ICDKRFAVKSYVTSHRWSHVGD  239 (292)
Q Consensus       212 ~~~~C~--~C~k~f~~~~~L~~H~~~h~~~  239 (292)
                      +.|.|+  .|+..|...+.|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            457775  5999999999999999999986

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.93  E-value=0.043  Score=23.58  Aligned_cols=23  Identities=30%  Similarity=0.693  Sum_probs=16.6

Q ss_pred             eeC--CccccccCChhHHHHHhhhh
Q psy4830         242 FGC--TSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       242 ~~C--~~C~~~f~~~~~L~~H~~~h  264 (292)
                      |.|  +.|++.|..-..|+.|+-+|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            455  34888888888888887664

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.58  E-value=0.039  Score=25.71  Aligned_cols=28  Identities=21%  Similarity=0.521  Sum_probs=21.1

Q ss_pred             cCCCCccCCcchhhcCChhHHHHHHhhh
Q psy4830           5 SGNKPYHCTACDASFCRKPYLEIHMRTH   32 (292)
Q Consensus         5 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h   32 (292)
                      .|+..|.|.+|.+.+...+.+-+|..+-
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHhh
Confidence            3556788888888888888888887653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.49  E-value=0.078  Score=23.35  Aligned_cols=22  Identities=23%  Similarity=0.578  Sum_probs=14.4

Q ss_pred             ccccccccccCCchHHHHHHhh
Q psy4830         186 FQCAVCSKRFTQKSSLNTHKRV  207 (292)
Q Consensus       186 ~~C~~C~k~f~~~~~L~~H~~~  207 (292)
                      |.|..||+...+...++.|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5677777777766666666543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.43  E-value=0.062  Score=27.13  Aligned_cols=28  Identities=25%  Similarity=0.568  Sum_probs=23.3

Q ss_pred             CCCCccccccccccCCchHHHHHHhhhc
Q psy4830         182 GERPFQCAVCSKRFTQKSSLNTHKRVHT  209 (292)
Q Consensus       182 ~~~~~~C~~C~k~f~~~~~L~~H~~~h~  209 (292)
                      .+.|-.|++|+.......+|++|+..-+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4568889999999999999999986543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.027  Score=31.21  Aligned_cols=37  Identities=24%  Similarity=0.622  Sum_probs=20.2

Q ss_pred             CCCccccccccccCCchHHHHHHhhhcCCCCccccccccc
Q psy4830         183 ERPFQCAVCSKRFTQKSSLNTHKRVHTGERPYACDICDKR  222 (292)
Q Consensus       183 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~k~  222 (292)
                      ...|.|+.|+++|..-..+.-   .-.....|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            345777777777764433322   2233345667776644

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.99  E-value=0.023  Score=31.11  Aligned_cols=28  Identities=29%  Similarity=0.650  Sum_probs=21.8

Q ss_pred             CCCccCCcchhhcCChhHHHHHHhhhcC
Q psy4830           7 NKPYHCTACDASFCRKPYLEIHMRTHTG   34 (292)
Q Consensus         7 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   34 (292)
                      ...|.|..|+..|.+...|..|+..|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            4468888888888888888888887753

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.042  Score=25.85  Aligned_cols=23  Identities=17%  Similarity=0.381  Sum_probs=12.8

Q ss_pred             CCcccCCCCCCccChHHHHhhhc
Q psy4830         269 ANHVCNVCGRSFVRDSYLIRHQN  291 (292)
Q Consensus       269 ~~~~C~~C~~~f~~~~~l~~H~r  291 (292)
                      +.|.|+.|-+-..+...|.+|+.
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHH
Confidence            34555555555555555555553

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.26  E-value=0.18  Score=22.06  Aligned_cols=21  Identities=19%  Similarity=0.477  Sum_probs=14.0

Q ss_pred             CccccccCChhHHHHHhhhhc
Q psy4830         245 TSCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       245 ~~C~~~f~~~~~L~~H~~~hh  265 (292)
                      +-||+.|+++..|.-|.+--|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            347777777777777766543

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.16  E-value=0.25  Score=21.64  Aligned_cols=24  Identities=38%  Similarity=0.874  Sum_probs=14.4

Q ss_pred             eeCC--ccccccCChhHHHHHhhhhc
Q psy4830         242 FGCT--SCHLTFTSKSQFAVHLRTHH  265 (292)
Q Consensus       242 ~~C~--~C~~~f~~~~~L~~H~~~hh  265 (292)
                      |.|.  .|+.+|.++.+++.|...-|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            4553  36677777777776664433

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.22  E-value=0.22  Score=27.14  Aligned_cols=25  Identities=24%  Similarity=0.667  Sum_probs=18.1

Q ss_pred             cceeCCccccccCChhHHHHHhhhh
Q psy4830         240 KPFGCTSCHLTFTSKSQFAVHLRTH  264 (292)
Q Consensus       240 ~~~~C~~C~~~f~~~~~L~~H~~~h  264 (292)
                      ..|.|..|+-.|-+...|..|+..|
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhc
Confidence            4577777777777777777777665

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=86.45  E-value=0.19  Score=25.69  Aligned_cols=11  Identities=45%  Similarity=1.011  Sum_probs=6.8

Q ss_pred             CCcccCCCCCC
Q psy4830         269 ANHVCNVCGRS  279 (292)
Q Consensus       269 ~~~~C~~C~~~  279 (292)
                      ..|.|++|+..
T Consensus        28 ~dw~CP~C~a~   38 (45)
T d6rxna_          28 DDWCCPVCGVS   38 (45)
T ss_dssp             TTCBCTTTCCB
T ss_pred             CCCCCcCCCCc
Confidence            34667777654

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=85.60  E-value=0.17  Score=24.70  Aligned_cols=9  Identities=0%  Similarity=0.006  Sum_probs=5.0

Q ss_pred             ccccccccc
Q psy4830         187 QCAVCSKRF  195 (292)
Q Consensus       187 ~C~~C~k~f  195 (292)
                      .|+.||..|
T Consensus         4 vc~~cG~~Y   12 (37)
T d2ak3a2           4 IHPGSGRVY   12 (37)
T ss_dssp             EETTTTEEE
T ss_pred             eeCCcCChh
Confidence            455555555

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.56  E-value=0.42  Score=22.33  Aligned_cols=27  Identities=26%  Similarity=0.356  Sum_probs=21.5

Q ss_pred             ceeCCccccccCChhHHHHHhhhhcCC
Q psy4830         241 PFGCTSCHLTFTSKSQFAVHLRTHHTV  267 (292)
Q Consensus       241 ~~~C~~C~~~f~~~~~L~~H~~~hh~~  267 (292)
                      ...|-.|-++|.+.-+..+|+-..|..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheeccc
Confidence            357888999999999999998766654

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.36  E-value=0.27  Score=20.72  Aligned_cols=12  Identities=42%  Similarity=0.872  Sum_probs=6.2

Q ss_pred             CCccccccCChh
Q psy4830         244 CTSCHLTFTSKS  255 (292)
Q Consensus       244 C~~C~~~f~~~~  255 (292)
                      |+.|...|.+..
T Consensus         3 cpycslrf~sp~   14 (26)
T d1wjpa2           3 CPYCSLRFFSPE   14 (26)
T ss_dssp             CTTTCCCBSSHH
T ss_pred             CCcceeeeCCHH
Confidence            555555555543

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.05  E-value=0.44  Score=22.24  Aligned_cols=24  Identities=29%  Similarity=0.524  Sum_probs=18.0

Q ss_pred             CCCccCCcchhhcCChhHHHHHHh
Q psy4830           7 NKPYHCTACDASFCRKPYLEIHMR   30 (292)
Q Consensus         7 ~~~~~C~~C~~~f~~~~~l~~H~~   30 (292)
                      .+.|.|+.|-+-..+...|.+|+.
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHH
Confidence            356778888887777777887765

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.93  E-value=0.4  Score=24.33  Aligned_cols=19  Identities=21%  Similarity=0.567  Sum_probs=10.1

Q ss_pred             cccCCCCCCccChHHHHhh
Q psy4830         271 HVCNVCGRSFVRDSYLIRH  289 (292)
Q Consensus       271 ~~C~~C~~~f~~~~~l~~H  289 (292)
                      -.|.+|+..|+.+.+++.|
T Consensus         7 ~eC~lC~vKYs~~~SvrdH   25 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDH   25 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHH
T ss_pred             ccCcccceeeeeecchHhh
Confidence            4455555555555555544