Psyllid ID: psy4907


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MDLRNLFTYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTRLQKC
ccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHcccccccccccccccEEHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccHcccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHccccHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHccccc
mdlrnlftYETLVHAIAGATgsvigvstfypLEIVKLRSIindrnlshndqKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHalksgsvigvstfypLEIVKLRSIindrnlshndqKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKsvkgsggessivTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYsvdikdssLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTRLQKC
MDLRNLFTYETLVHAiagatgsvigvSTFYPLEIVKLRSIIndrnlshndQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRSIIndrnlshndQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQnvqrwtrlqkc
MDLRNLFTYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTRLQKC
****NLFTYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTR****
**********TLVHAIAGATGSVIGVSTFYPLEIVKLR*****************QKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRS***************LQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALK*************DLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTRLQK*
MDLRNLFTYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKS*********IVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTRLQKC
****NLFTYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTR*Q**
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
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MDLRNLFTYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTRLQKC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query308 2.2.26 [Sep-21-2011]
O43808307 Peroxisomal membrane prot yes N/A 0.659 0.661 0.436 2e-44
O70579307 Peroxisomal membrane prot yes N/A 0.659 0.661 0.436 2e-41
Q76P23329 Mitochondrial substrate c yes N/A 0.642 0.601 0.353 5e-26
Q8BMG8316 Mitochondrial folate tran no N/A 0.652 0.636 0.342 7e-24
Q95J75315 Mitochondrial folate tran N/A N/A 0.652 0.638 0.347 2e-23
Q9H2D1315 Mitochondrial folate tran no N/A 0.652 0.638 0.342 3e-23
Q7XA87308 Folate transporter 1, chl yes N/A 0.646 0.646 0.325 9e-22
O04200331 Peroxisomal nicotinamide no N/A 0.620 0.577 0.275 2e-21
P39953335 Mitochondrial nicotinamid yes N/A 0.626 0.576 0.339 1e-20
Q8RWA5 363 Nicotinamide adenine dinu no N/A 0.610 0.517 0.299 5e-19
>sp|O43808|PM34_HUMAN Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1 Back     alignment and function desciption
 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/220 (43%), Positives = 140/220 (63%), Gaps = 17/220 (7%)

Query: 98  GSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKS 157
           GSV  ++ F+PL+  +LR  ++++  S      +L+    IIKEEGL A Y+G  P++ S
Sbjct: 19  GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLE----IIKEEGLLAPYRGWFPVISS 74

Query: 158 LYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLK---- 213
           L  SNFVYFY+F++LK++   G  S+   DL +  +AG++NVL TTPLWVVNTRLK    
Sbjct: 75  LCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGA 134

Query: 214 -------VSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYSV 266
                  V   Y G++   ++I ++EG SALW GTF S++LV NPAIQ   YE LKR  +
Sbjct: 135 KFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLKRQLL 194

Query: 267 D--IKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTR 304
              +K SSL  F++ A++K ++T VTYP+Q  Q++ R+ R
Sbjct: 195 KKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGR 234




Peroxisomal transporter for multiple cofactors like coenzyme A (CoA), flavin adenine dinucleotide (FAD), flavin mononucleotide (FMN) and nucleotide adenosine monophosphate (AMP), and to a lesser extend for nicotinamide adenine dinucleotide (NAD(+)), adenosine diphosphate (ADP) and adenosine 3',5'-diphosphate (PAP). May catalyze the transport of free CoA, FAD and NAD(+) from the cytosol into the peroxisomal matrix by a counter-exchange mechanism. Inhibited by pyridoxal 5'-phosphate and bathophenanthroline in vitro.
Homo sapiens (taxid: 9606)
>sp|O70579|PM34_MOUSE Peroxisomal membrane protein PMP34 OS=Mus musculus GN=Slc25a17 PE=2 SV=1 Back     alignment and function description
>sp|Q76P23|PM34_DICDI Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1 Back     alignment and function description
>sp|Q8BMG8|MFTC_MOUSE Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1 Back     alignment and function description
>sp|Q95J75|MFTC_MACFA Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1 Back     alignment and function description
>sp|Q9H2D1|MFTC_HUMAN Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2 Back     alignment and function description
>sp|Q7XA87|FOLT1_ARATH Folate transporter 1, chloroplastic OS=Arabidopsis thaliana GN=FOLT1 PE=2 SV=1 Back     alignment and function description
>sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1 Back     alignment and function description
>sp|P39953|YEA6_YEAST Mitochondrial nicotinamide adenine dinucleotide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEA6 PE=1 SV=1 Back     alignment and function description
>sp|Q8RWA5|NDT2_ARATH Nicotinamide adenine dinucleotide transporter 2, mitochondrial OS=Arabidopsis thaliana GN=NDT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
91087581285 PREDICTED: similar to AGAP007520-PA [Tri 0.711 0.768 0.469 1e-47
242004650298 Peroxisomal membrane protein PMP34, puta 0.691 0.714 0.454 6e-47
194747427315 GF25064 [Drosophila ananassae] gi|190623 0.668 0.653 0.461 4e-46
195012544318 GH16026 [Drosophila grimshawi] gi|193897 0.672 0.650 0.457 9e-46
25012556314 RE36975p [Drosophila melanogaster] 0.681 0.668 0.448 1e-45
195376591316 GJ13227 [Drosophila virilis] gi|19415423 0.675 0.658 0.451 1e-45
195126283317 GI12290 [Drosophila mojavensis] gi|19391 0.688 0.668 0.454 1e-45
24657533314 CG32250, isoform A [Drosophila melanogas 0.681 0.668 0.452 1e-45
195587750314 GD13838 [Drosophila simulans] gi|1941956 0.668 0.656 0.453 2e-45
194866461314 GG15221 [Drosophila erecta] gi|190653670 0.668 0.656 0.453 2e-45
>gi|91087581|ref|XP_971751.1| PREDICTED: similar to AGAP007520-PA [Tribolium castaneum] gi|270009432|gb|EFA05880.1| hypothetical protein TcasGA2_TC008692 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/228 (46%), Positives = 148/228 (64%), Gaps = 9/228 (3%)

Query: 84  SNFVYFYSFHALK--SGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKE 141
           S F Y    HA    +GS++  S  YPL+ VK R  + D +L+    K  LQ    ++K+
Sbjct: 5   SIFTYETLVHATAGAAGSIVASSVMYPLDNVKFRMQLEDSSLAG---KTALQALFYLLKK 61

Query: 142 EGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLT 201
           EGLE LY+G++P + +L  SNF+YFY+FH LKS+K +  ++   TDL LS +AGIINV+T
Sbjct: 62  EGLEGLYRGIKPQLTTLGISNFIYFYAFHGLKSLKLNNCKNPTQTDLILSIVAGIINVIT 121

Query: 202 TTPLWVVNTRLKVSNQ--YSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYE 259
           T PLWVVN+RLK S +  ++GLL G+  I   EG  ALW     S++LVSNPAI  ++YE
Sbjct: 122 TNPLWVVNSRLKFSRELYFTGLLDGIVHIADSEGVRALWSSLGPSLMLVSNPAINFTIYE 181

Query: 260 LLKRYSVDIKDSSLKFFVLAAMSKIVSTLVTYPVQIAQNVQRWTRLQK 307
            LKR +     ++L FFV+ A+SK VST+ TYP+Q+AQ  QR+ R  K
Sbjct: 182 ALKRRTSS--RTALAFFVMGAISKAVSTIATYPLQVAQTRQRYNRDAK 227




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004650|ref|XP_002423193.1| Peroxisomal membrane protein PMP34, putative [Pediculus humanus corporis] gi|212506158|gb|EEB10455.1| Peroxisomal membrane protein PMP34, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|194747427|ref|XP_001956153.1| GF25064 [Drosophila ananassae] gi|190623435|gb|EDV38959.1| GF25064 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195012544|ref|XP_001983696.1| GH16026 [Drosophila grimshawi] gi|193897178|gb|EDV96044.1| GH16026 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|25012556|gb|AAN71379.1| RE36975p [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|195376591|ref|XP_002047080.1| GJ13227 [Drosophila virilis] gi|194154238|gb|EDW69422.1| GJ13227 [Drosophila virilis] Back     alignment and taxonomy information
>gi|195126283|ref|XP_002007600.1| GI12290 [Drosophila mojavensis] gi|193919209|gb|EDW18076.1| GI12290 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|24657533|ref|NP_728982.1| CG32250, isoform A [Drosophila melanogaster] gi|386770563|ref|NP_001246615.1| CG32250, isoform B [Drosophila melanogaster] gi|23093002|gb|AAF47885.2| CG32250, isoform A [Drosophila melanogaster] gi|383291749|gb|AFH04286.1| CG32250, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|195587750|ref|XP_002083624.1| GD13838 [Drosophila simulans] gi|194195633|gb|EDX09209.1| GD13838 [Drosophila simulans] Back     alignment and taxonomy information
>gi|194866461|ref|XP_001971887.1| GG15221 [Drosophila erecta] gi|190653670|gb|EDV50913.1| GG15221 [Drosophila erecta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query308
FB|FBgn0052250314 CG32250 [Drosophila melanogast 0.717 0.703 0.432 5e-44
UNIPROTKB|F1PTI5307 SLC25A17 "Uncharacterized prot 0.675 0.677 0.436 2.8e-41
UNIPROTKB|O43808307 SLC25A17 "Peroxisomal membrane 0.675 0.677 0.431 2.8e-41
RGD|1311498307 Slc25a17 "solute carrier famil 0.675 0.677 0.436 3.6e-41
MGI|MGI:1342248307 Slc25a17 "solute carrier famil 0.675 0.677 0.436 3.6e-41
UNIPROTKB|F8WE74239 SLC25A17 "Peroxisomal membrane 0.665 0.857 0.433 7.5e-41
UNIPROTKB|Q2KJJ1307 SLC25A17 "Solute carrier famil 0.675 0.677 0.436 9.6e-41
UNIPROTKB|F1SRB8308 SLC25A17 "Uncharacterized prot 0.675 0.675 0.434 9.6e-41
UNIPROTKB|E1BSN0335 SLC25A17 "Uncharacterized prot 0.733 0.674 0.416 1.2e-40
ZFIN|ZDB-GENE-070620-4312 slc25a17 "solute carrier famil 0.691 0.682 0.420 4.8e-39
FB|FBgn0052250 CG32250 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 105/243 (43%), Positives = 150/243 (61%)

Query:    77 MVKSLYTSNFVYFYSF-HALK--SGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQ 133
             MV     S  + + +F HA+   +G  I +STFYPL+ V+ R  + +      D +  +Q
Sbjct:     1 MVAPSKLSQVLSYQNFVHAVSGAAGGCIAMSTFYPLDTVRSRLQLEEAG----DVRSTMQ 56

Query:   134 KFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGES--SIVTDLCLS 191
               ++I+  +G ++LY+GL P+++SL  SNFVYFY+FHALK+V   G  S  S + DL L 
Sbjct:    57 VIKEIVLGDGFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLG 116

Query:   192 SIAGIINVLTTTPLWVVNTRLKVSN----------QYSGLLHGLNKIYKEEGASALWKGT 241
             SIAGIINVLTTTP WVVNTRL++ N           Y  LL GL  + ++EG + LW GT
Sbjct:   117 SIAGIINVLTTTPFWVVNTRLRMRNVAGTSDEVNKHYKNLLEGLKYVAEKEGIAGLWSGT 176

Query:   242 FASIILVSNPAIQMSVYELLKRYSVDIKDS---SLKFFVLAAMSKIVSTLVTYPVQIAQN 298
               S++LVSNPA+Q  +YE+LKR  +        SL FF + A++K  +T++TYP+Q+ Q 
Sbjct:   177 IPSLMLVSNPALQFMMYEMLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQT 236

Query:   299 VQR 301
              QR
Sbjct:   237 KQR 239


GO:0022857 "transmembrane transporter activity" evidence=ISS
GO:0005740 "mitochondrial envelope" evidence=ISS
GO:0005215 "transporter activity" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0005779 "integral to peroxisomal membrane" evidence=ISS
UNIPROTKB|F1PTI5 SLC25A17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O43808 SLC25A17 "Peroxisomal membrane protein PMP34" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1311498 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1342248 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F8WE74 SLC25A17 "Peroxisomal membrane protein PMP34" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KJJ1 SLC25A17 "Solute carrier family 25 (Mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SRB8 SLC25A17 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BSN0 SLC25A17 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070620-4 slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q76P23PM34_DICDINo assigned EC number0.35320.64280.6018yesN/A
Q7XA87FOLT1_ARATHNo assigned EC number0.32580.64610.6461yesN/A
Q9P3T7ODC_SCHPONo assigned EC number0.25760.80510.8322yesN/A
O43808PM34_HUMANNo assigned EC number0.43630.65900.6612yesN/A
O70579PM34_MOUSENo assigned EC number0.43630.65900.6612yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 8e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-10
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-07
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-06
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 81.9 bits (203), Expect = 8e-20
 Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 6/91 (6%)

Query: 180 GESSIVTDLCLSSIAGIINVLTTTPLWVVNTRL-----KVSNQYSGLLHGLNKIYKEEGA 234
              S +  L    IAG I    T PL VV TRL       S +Y G+L    KIYKEEG 
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 235 SALWKGTFASII-LVSNPAIQMSVYELLKRY 264
             L+KG   +++ +    AI    YE LK+ 
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKL 91


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 308
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0753|consensus317 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760|consensus302 100.0
KOG0758|consensus297 100.0
KOG0757|consensus319 100.0
KOG0762|consensus311 100.0
KOG0759|consensus286 100.0
KOG0754|consensus294 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751|consensus694 100.0
KOG0764|consensus299 100.0
KOG0761|consensus361 100.0
KOG0752|consensus320 100.0
KOG0768|consensus323 100.0
KOG0760|consensus302 100.0
KOG0769|consensus308 100.0
KOG0765|consensus333 100.0
KOG0749|consensus298 100.0
KOG0756|consensus299 100.0
KOG0753|consensus317 100.0
KOG0766|consensus297 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0755|consensus320 100.0
KOG0750|consensus304 100.0
KOG0036|consensus463 100.0
KOG0770|consensus353 100.0
KOG0763|consensus301 100.0
KOG0759|consensus286 100.0
KOG0757|consensus319 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0767|consensus333 100.0
KOG0762|consensus311 100.0
KOG0758|consensus297 100.0
KOG0754|consensus294 100.0
KOG0761|consensus361 100.0
KOG0770|consensus353 100.0
KOG0769|consensus308 100.0
KOG0768|consensus323 100.0
KOG0751|consensus 694 100.0
KOG0765|consensus333 99.98
KOG0767|consensus333 99.97
KOG0766|consensus297 99.97
KOG0036|consensus463 99.97
KOG0755|consensus320 99.97
KOG0749|consensus298 99.97
KOG0763|consensus301 99.97
KOG0750|consensus304 99.95
KOG0756|consensus299 99.95
KOG2745|consensus321 99.91
KOG1519|consensus297 99.89
KOG2745|consensus321 99.85
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.72
KOG2954|consensus427 99.66
KOG1519|consensus297 99.63
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.62
KOG2954|consensus427 98.3
>KOG0764|consensus Back     alignment and domain information
Probab=100.00  E-value=2.3e-55  Score=361.88  Aligned_cols=258  Identities=28%  Similarity=0.432  Sum_probs=229.5

Q ss_pred             hhHHHHHHhhHHHHHHhhhcchhhhhhhhhhhccCC-CCCCCCCcHHHHHHHHHhhhcHhHhhccchhhhhhhcccchhh
Q psy4907          10 ETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRN-LSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVY   88 (308)
Q Consensus        10 ~~~~~~~~g~~a~~~~~~~~~Pld~iktr~Q~~~~~-~~~~~~~~~~~~~~~i~~~~G~~gl~~G~~~~~~~~~~~~~~~   88 (308)
                      ..+..+++|+++|.+++++.||||++|+|+|++++. ...+.|+++.++++.|++.||++|||||+.|.+++..+++.++
T Consensus         4 ~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiY   83 (299)
T KOG0764|consen    4 VQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLY   83 (299)
T ss_pred             cchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHH
Confidence            345566999999999999999999999999999655 3456789999999999999999999999999999999999999


Q ss_pred             HHhHHHHh-------------------hhh---hhhhhccchHHHHHHHHhhccCCCCCCCCccHHHHHHHHHHHHhHHH
Q psy4907          89 FYSFHALK-------------------SGS---VIGVSTFYPLEIVKLRSIINDRNLSHNDQKGILQKFEQIIKEEGLEA  146 (308)
Q Consensus        89 ~~~~~~~~-------------------ag~---~~~~~~~~P~~~ik~r~q~~~~~~~~~~~~~~~~~~~~i~~~~G~~~  146 (308)
                      |..|+..+                   +++   ++++++++|++++|+|++.|.......+|++.++++++|+++||++|
T Consensus        84 F~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~rg  163 (299)
T KOG0764|consen   84 FFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGFRG  163 (299)
T ss_pred             HHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhHHH
Confidence            99999876                   233   33445899999999999999988788899999999999999999999


Q ss_pred             hhhchhhHHhhhhhhhHHHHHHHHHHHhhhcCCC------CchhHHHHHHHHHHHHHHHHhcccHHHHHHHHhhc---cC
Q psy4907         147 LYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGG------ESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVS---NQ  217 (308)
Q Consensus       147 ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ag~~~~~v~~Pld~ik~r~q~~---~~  217 (308)
                      ||+|+.|.++ .....+++|.+||.+|....+..      .......++.+.++.++++.+|||++++|+|||.+   +.
T Consensus       164 LY~GlVP~L~-GvshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~~~~  242 (299)
T KOG0764|consen  164 LYKGLVPGLL-GVSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSDNPR  242 (299)
T ss_pred             HHhhhhhHhh-hhchhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccCcc
Confidence            9999999998 46688999999999999874321      12445566666699999999999999999999987   67


Q ss_pred             cCcHHHHHHHHHHhhCcccccccccchhhh-cccchhHHHHHHHHHHHhhhc
Q psy4907         218 YSGLLHGLNKIYKEEGASALWKGTFASIIL-VSNPAIQMSVYELLKRYSVDI  268 (308)
Q Consensus       218 ~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~-~~~~~~~~~~ye~~~~~l~~~  268 (308)
                      |++.+++++++||+||++|||||+.++++| +|.+.++|.+||.+++++..+
T Consensus       243 ~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~  294 (299)
T KOG0764|consen  243 YRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTH  294 (299)
T ss_pred             cccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhcc
Confidence            999999999999999999999999999998 789999999999999988764



>KOG0752|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-11
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 6e-10
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 36/285 (12%) Query: 16 IAGATGSVIGVSTFYPLEIVKLRSIIN--DRNLSHNDQ-KGILQKFEQIIKEEGLEALYQ 72 +AG + I + P+E VKL + + +S Q KGI+ +I KE+G + ++ Sbjct: 12 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71 Query: 73 G-LEPMVKSLYTS--NFVY-----------------FYSFHA--LKSGSVIGVSTF---Y 107 G L +++ T NF + F+ + A L SG G ++ Y Sbjct: 72 GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVY 131 Query: 108 PLEIVKLRSIIN-DRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSNFVYF 166 PL+ + R + + + + G+ +I K +GL LYQG V+ + YF Sbjct: 132 PLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYF 191 Query: 167 YSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSN-------QYS 219 + K + I+ ++ + L + P V R+ + + Y+ Sbjct: 192 GVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYT 251 Query: 220 GLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRY 264 G + KI K+EG A +KG +++++ A + +Y+ +K++ Sbjct: 252 GTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 296
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query308
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-39
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-26
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-14
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-35
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-30
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 4e-10
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  139 bits (352), Expect = 2e-39
 Identities = 59/293 (20%), Positives = 111/293 (37%), Gaps = 36/293 (12%)

Query: 8   TYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNLSHNDQ---KGILQKFEQIIKE 64
               L   +AG   + I  +   P+E VKL   +   +   + +   KGI+    +I KE
Sbjct: 4   ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKE 63

Query: 65  EGLEALYQGLEPMV-----------------KSLYTSNF-----VYFYSFHALKSGSVIG 102
           +G  + ++G    V                 K ++          + Y    L SG   G
Sbjct: 64  QGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAG 123

Query: 103 VST---FYPLEIVKLRSIINDRNLSHNDQ-KGILQKFEQIIKEEGLEALYQGLEPMVKSL 158
            ++    YPL+  + R   +    +   +  G+     +I K +GL  LYQG    V+ +
Sbjct: 124 ATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 183

Query: 159 YTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRL------ 212
                 YF  +   K +        I+    ++     +  L + P   V  R+      
Sbjct: 184 IIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGR 243

Query: 213 -KVSNQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRY 264
                 Y+G +    KI K+EG  A +KG +++++     A  + +Y+ +K++
Sbjct: 244 KGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKF 296


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=4.7e-53  Score=372.77  Aligned_cols=257  Identities=23%  Similarity=0.379  Sum_probs=224.2

Q ss_pred             hhhHHHHHHhhHHHHHHhhhcchhhhhhhhhhhccCCC---CCCCCCcHHHHHHHHHhhhcHhHhhccchhhhhhhcccc
Q psy4907           9 YETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNL---SHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSN   85 (308)
Q Consensus         9 ~~~~~~~~~g~~a~~~~~~~~~Pld~iktr~Q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~gl~~G~~~~~~~~~~~~   85 (308)
                      .+.+..+++|++|++++.+++||||++|+|+|++....   +...|++..+++++|+++||++|||||+.+++++..+..
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~   84 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   84 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence            35678999999999999999999999999999986432   234688999999999999999999999999999999999


Q ss_pred             hhhHHhHHHHh----------------------hhhhhh---hhccchHHHHHHHHhhccCCC-CCCCCccHHHHHHHHH
Q psy4907          86 FVYFYSFHALK----------------------SGSVIG---VSTFYPLEIVKLRSIINDRNL-SHNDQKGILQKFEQII  139 (308)
Q Consensus        86 ~~~~~~~~~~~----------------------ag~~~~---~~~~~P~~~ik~r~q~~~~~~-~~~~~~~~~~~~~~i~  139 (308)
                      .++|..||.++                      +|.+++   .++++|+|++|+|+|++.... ...+|++.++++++++
T Consensus        85 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~  164 (297)
T 1okc_A           85 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF  164 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHH
Confidence            99999887654                      223333   348999999999999986432 2356899999999999


Q ss_pred             HHHhHHHhhhchhhHHhhhhhhhHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHhcccHHHHHHHHhhc----
Q psy4907         140 KEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVS----  215 (308)
Q Consensus       140 ~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~~~~v~~Pld~ik~r~q~~----  215 (308)
                      ++||++|||||+.+++++.++..+++|.+||.+++.+.+.++.+....+++|++||++++++++|+|+||+|+|.+    
T Consensus       165 ~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~~  244 (297)
T 1okc_A          165 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRK  244 (297)
T ss_dssp             HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred             HhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCC
Confidence            9999999999999999999999999999999999987665556677889999999999999999999999999986    


Q ss_pred             ---cCcCcHHHHHHHHHHhhCcccccccccchhhhcccchhHHHHHHHHHHHh
Q psy4907         216 ---NQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELLKRYS  265 (308)
Q Consensus       216 ---~~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~~~~~ye~~~~~l  265 (308)
                         ..|+++++|+++|+|+||++|||||+.|+++|.+.+++.|.+||.+|+++
T Consensus       245 ~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          245 GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC----
T ss_pred             CCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhhccceeeehHHHHHHhhC
Confidence               25899999999999999999999999999999777899999999998753



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 308
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-21
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-06
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-05
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 89.8 bits (221), Expect = 2e-21
 Identities = 54/284 (19%), Positives = 104/284 (36%), Gaps = 36/284 (12%)

Query: 12  LVHAIAGATGSVIGVSTFYPLEIVKLR---SIINDRNLSHNDQKGILQKFEQIIKEEGLE 68
           L   +AG   + I  +   P+E VKL       + +  +    KGI+    +I KE+G  
Sbjct: 7   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 66

Query: 69  ALYQGLEPMVKSLYTSNFVYFYSFHALKS-------------------------GSVIGV 103
           + ++G    V   + +  + F      K                               +
Sbjct: 67  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSL 126

Query: 104 STFYPLEIVKLRSIIN-DRNLSHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTSN 162
              YPL+  + R   +  +  +  +  G+     +I K +GL  LYQG    V+ +    
Sbjct: 127 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYR 186

Query: 163 FVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVSN------ 216
             YF  +   K +        I+    ++     +  L + P   V  R+ + +      
Sbjct: 187 AAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGAD 246

Query: 217 -QYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYE 259
             Y+G +    KI K+EG  A +KG +++++     A  + +Y+
Sbjct: 247 IMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYD 290


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query308
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.6e-49  Score=347.16  Aligned_cols=254  Identities=22%  Similarity=0.363  Sum_probs=226.5

Q ss_pred             hhhhHHHHHHhhHHHHHHhhhcchhhhhhhhhhhccCCC---CCCCCCcHHHHHHHHHhhhcHhHhhccchhhhhhhccc
Q psy4907           8 TYETLVHAIAGATGSVIGVSTFYPLEIVKLRSIINDRNL---SHNDQKGILQKFEQIIKEEGLEALYQGLEPMVKSLYTS   84 (308)
Q Consensus         8 ~~~~~~~~~~g~~a~~~~~~~~~Pld~iktr~Q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~gl~~G~~~~~~~~~~~   84 (308)
                      +.+..+++++|++|++++.+++||||++|+|+|++....   ....+++.++++++++++||+++||+|+.+.++...+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            345678899999999999999999999999999987542   23568899999999999999999999999999999999


Q ss_pred             chhhHHhHHHHh----------------------hhh---hhhhhccchHHHHHHHHhhccCCC-CCCCCccHHHHHHHH
Q psy4907          85 NFVYFYSFHALK----------------------SGS---VIGVSTFYPLEIVKLRSIINDRNL-SHNDQKGILQKFEQI  138 (308)
Q Consensus        85 ~~~~~~~~~~~~----------------------ag~---~~~~~~~~P~~~ik~r~q~~~~~~-~~~~~~~~~~~~~~i  138 (308)
                      ..++|..|+.++                      +|.   +++.++++|+|++|+|+|.+.... ..+++.+..+.++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~  162 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  162 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHh
Confidence            999999988754                      222   234458999999999999987543 334678999999999


Q ss_pred             HHHHhHHHhhhchhhHHhhhhhhhHHHHHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHHHhcccHHHHHHHHhhc---
Q psy4907         139 IKEEGLEALYQGLEPMVKSLYTSNFVYFYSFHALKSVKGSGGESSIVTDLCLSSIAGIINVLTTTPLWVVNTRLKVS---  215 (308)
Q Consensus       139 ~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~~~~v~~Pld~ik~r~q~~---  215 (308)
                      +++||+++||+|+.++++++.++.+++|..||.+|+.+.+..+......++++.++++++++++||+|+||+|||.+   
T Consensus       163 ~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~  242 (292)
T d1okca_         163 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGR  242 (292)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred             hhccchhhhhccccccccceehHhhhhhhhccchhhhcccccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999988877777888999999999999999999999999999987   


Q ss_pred             ----cCcCcHHHHHHHHHHhhCcccccccccchhhhcccchhHHHHHHHH
Q psy4907         216 ----NQYSGLLHGLNKIYKEEGASALWKGTFASIILVSNPAIQMSVYELL  261 (308)
Q Consensus       216 ----~~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~~~~~ye~~  261 (308)
                          ..|.++++++++++|+||++|||||+.|++++.+.+++.|.+||.+
T Consensus       243 ~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~~~i~~~~ye~l  292 (292)
T d1okca_         243 KGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI  292 (292)
T ss_dssp             CGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHHHHhhhhHhhcC
Confidence                3588999999999999999999999999999866678999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure