Psyllid ID: psy4956
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | 2.2.26 [Sep-21-2011] | |||||||
| P35992 | 1631 | Tyrosine-protein phosphat | no | N/A | 0.977 | 0.216 | 0.659 | 1e-131 | |
| B2RU80 | 1998 | Receptor-type tyrosine-pr | yes | N/A | 0.803 | 0.145 | 0.275 | 2e-11 | |
| Q92752 | 1358 | Tenascin-R OS=Homo sapien | yes | N/A | 0.731 | 0.194 | 0.280 | 3e-10 | |
| Q00546 | 1353 | Tenascin-R OS=Gallus gall | yes | N/A | 0.695 | 0.185 | 0.278 | 6e-10 | |
| Q29116 | 1746 | Tenascin OS=Sus scrofa GN | no | N/A | 0.786 | 0.162 | 0.242 | 8e-10 | |
| Q8BYI9 | 1358 | Tenascin-R OS=Mus musculu | no | N/A | 0.722 | 0.192 | 0.277 | 1e-09 | |
| Q05546 | 1356 | Tenascin-R OS=Rattus norv | no | N/A | 0.722 | 0.192 | 0.277 | 1e-09 | |
| P11276 | 2477 | Fibronectin OS=Mus muscul | no | N/A | 0.908 | 0.132 | 0.247 | 5e-09 | |
| Q91740 | 2481 | Fibronectin OS=Xenopus la | N/A | N/A | 0.759 | 0.110 | 0.272 | 1e-08 | |
| P04937 | 2477 | Fibronectin OS=Rattus nor | no | N/A | 0.908 | 0.132 | 0.242 | 2e-08 |
| >sp|P35992|PTP10_DROME Tyrosine-protein phosphatase 10D OS=Drosophila melanogaster GN=Ptp10D PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/358 (65%), Positives = 276/358 (77%), Gaps = 5/358 (1%)
Query: 5 VHGVHGANLVIKIPENLS-SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGT 63
+ V A+L I IP N D ++YRLDY P G+P PNTT SR+I D I+FS LPGT
Sbjct: 37 LKDVRCADLAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASREIGDEIQFSRALPGT 96
Query: 64 KYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKL 123
KY+F+LYYTN T HDWLTWT +ITT PDPP+NLSV VRSGK A I WSPP G Y+ FK+
Sbjct: 97 KYNFWLYYTNFTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYTAFKI 156
Query: 124 KVISLSEKTPPRIIGFTENPPA-GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182
KV+ LSE + F N +S+K+LTPG +YQVQ +++YD KESVAYTSRNFTTK
Sbjct: 157 KVLGLSEASSSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTK 216
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
PNTPGKFIVWFRNETTLLVLWQP YPA IYTHYKVSI+PPDA +SVLYVEKEGEPPGPAQ
Sbjct: 217 PNTPGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQ 276
Query: 243 AAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEP 302
AAFKGLVPGRAYNISVQT+SEDEIS PTTAQYRT+PLRPL+ T+D+ ITSNS RV+WE
Sbjct: 277 AAFKGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEA 336
Query: 303 PKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
PKG SEFDKYQVS+ R ++ + +S + D + EPG+T+ V+VKTVSGK
Sbjct: 337 PKGISEFDKYQVSVATTRRQST---VPRSNEPVAFFDFRDIAEPGKTFNVIVKTVSGK 391
|
May have a role in axon outgrowth and guidance. Drosophila melanogaster (taxid: 7227) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8 |
| >sp|B2RU80|PTPRB_MOUSE Receptor-type tyrosine-protein phosphatase beta OS=Mus musculus GN=Ptprb PE=1 SV=1 | Back alignment and function description |
|---|
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 29/319 (9%)
Query: 46 VSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPTNLSVNVRSG 103
+S+D K+ F++ +PG Y T +++ L ++SI T P T+L VN G
Sbjct: 514 LSKDAKE-FTFTDLMPGRNYK----ATVTSMSGDLKQSSSIKGRTVPAQVTDLHVN-NQG 567
Query: 104 KTAQIF--WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161
T+ +F W+ + G +++ +I + + + + YS + L PG Y V
Sbjct: 568 MTSSLFTNWTKAL-GDVEFYQVLLIHENVVVKNESVS---SDTSRYSFRALKPGSLYSVV 623
Query: 162 LFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP 221
+ +V S + T + G + L V W P+ P + HY VS+
Sbjct: 624 VTTVSGGISSRQVVAEGRTVPSSVSGVTVNNSGRNDYLSVSWLPA-PGEV-DHYVVSLSH 681
Query: 222 PDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
+ L + K ++ +F L PGR YN++V T S + S T + RT+P +
Sbjct: 682 EGKVDQFLIIAK-----SVSECSFSSLTPGRLYNVTVTTKSGNYASHSFTEE-RTVPDKV 735
Query: 282 LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS 341
+ S S+ L+V W G +FD Y+V+I R + I KS +E C+
Sbjct: 736 QGISVSN-SARSDYLKVSWVHATG--DFDHYEVTIKNRESFIQTKTIPKSENE---CEFI 789
Query: 342 EGLEPGRTYQVLVKTVSGK 360
E L PGR Y V V T SG+
Sbjct: 790 E-LVPGRLYSVTVSTKSGQ 807
|
Plays an important role in blood vessel remodeling and angiogenesis. Not necessary for the initial formation of blood vessels, but is essential for their maintenance and remodeling. Can induce dephosphorylation of TEK/TIE2, CDH5/VE-cadherin and KDR/VEGFR-2. Regulates angiopoietin-TIE2 signaling in endothelial cells. Acts as a negative regulator of TIE2, and controls TIE2 driven endothelial cell proliferation, which in turn affects blood vessel remodeling during embryonic development and determines blood vessel size during perinatal growth. Essential for the maintenance of endothelial cell contact integrity and for the adhesive function of VE-cadherin in endothelial cells and this requires the presence of plakoglobin. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 4 EC: 8 |
| >sp|Q92752|TENR_HUMAN Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3 | Back alignment and function description |
|---|
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 113/278 (40%), Gaps = 14/278 (5%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
+AS++T D PT + V S A + W PP + F L L R +
Sbjct: 497 SASVSTVIDGPTQILVRDVSDTVAFVEWIPPRA--KVDFILLKYGLVGGEGGRTTFRLQP 554
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
P + YS++ L PG Y+V + +V + ES + T++ FTT+ + P V R T+L +
Sbjct: 555 PLSQYSVQALRPGSRYEVSVSAVRGTNESDSATTQ-FTTEIDAPKNLRVGSRTATSLDLE 613
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W S YKV + + G P +A LVPG Y + + V
Sbjct: 614 WDNSEAE--VQEYKVVYSTLAGEQYHEVLVPRGIGP-TTRATLTDLVPGTEYGVGISAVM 670
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ S P T RT P +S TS SL +W G D Y+++
Sbjct: 671 NSQQSVPATMNARTELDSPRDLMVTASSETSISL--IWTKASG--PIDHYRITFTPSSGI 726
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
AS + K R T D LEPG Y + V G+
Sbjct: 727 ASEVTVPKDRTSYTLTD----LEPGAEYIISVTAERGR 760
|
Neural extracellular matrix (ECM) protein involved in interactions with different cells and matrix components. These interactions can influence cellular behavior by either evoking a stable adhesion and differentiation, or repulsion and inhibition of neurite growth. Binding to cell surface gangliosides inhibits RGD-dependent integrin-mediated cell adhesion and results in an inhibition of PTK2/FAK1 (FAK) phosphorylation and cell detachment. Binding to membrane surface sulfatides results in a oligodendrocyte adhesion and differentiation. Interaction with CNTN1 induces a repulsion of neurons and an inhibition of neurite outgrowth. Interacts with SCN2B may play a crucial role in clustering and regulation of activity of sodium channels at nodes of Ranvier. TNR-linked chondroitin sulfate glycosaminoglycans are involved in the interaction with FN1 and mediate inhibition of cell adhesion and neurite outgrowth. The highly regulated addition of sulfated carbohydrate structure may modulate the adhesive properties of TNR over the course of development and during synapse maintenance. Homo sapiens (taxid: 9606) |
| >sp|Q00546|TENR_CHICK Tenascin-R OS=Gallus gallus GN=TNR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 117/287 (40%), Gaps = 36/287 (12%)
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
SI+T D PT + V S A + W+PP + LK L++ R + P
Sbjct: 498 SISTLIDGPTQILVRDVSDTVAFVEWTPP-RARVDAILLK-YGLADGEGGRTTFRLQPPL 555
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204
+ YSL+ L PG Y + + ++ + ES ++ FTT+ + P V R +L + W
Sbjct: 556 SQYSLQALRPGARYHLAVSALRGANESQPALAQ-FTTEIDAPKNLRVGSRTPASLELTWD 614
Query: 205 PS----------YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA-QAAFKGLVPGRA 253
S Y HY + P D GP +A LVPG
Sbjct: 615 NSEAEAHSYRVVYSTLAGEHYHEVLVPRDT--------------GPTTRATLADLVPGTE 660
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
Y I + V + + S P T RT P ++ TS SL W K D Y+
Sbjct: 661 YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLS--W--TKAMGPIDHYR 716
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
V+ AS +T SR+E +Q +SE LEPG Y + + G+
Sbjct: 717 VTFTPASGMASE--VTVSRNE-SQLTLSE-LEPGTEYTISIIAERGR 759
|
Neural extracellular matrix (ECM) protein involved in interactions with different cells and matrix components. Involved in cell attachment and neurite formation. Interaction with CNTN1 enhances the neurite outgrowth. Gallus gallus (taxid: 9031) |
| >sp|Q29116|TENA_PIG Tenascin OS=Sus scrofa GN=TNC PE=1 SV=1 | Back alignment and function description |
|---|
Score = 65.1 bits (157), Expect = 8e-10, Method: Composition-based stats.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 17/301 (5%)
Query: 61 PGTKYDFYLYYT-NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
PG +Y+ L+ N+T L TT D P+ + + TA I W P++ +
Sbjct: 775 PGQEYEISLHIVKNNTRGPGLKRVT--TTRLDAPSQIEAKDVTDTTALITWFKPLA-EID 831
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNF 179
G +L + + R + YS+ +L P Y+V L S + S F
Sbjct: 832 GIEL-TYGIKDVPGDRTTIDLTHEENQYSIGNLKPDTEYEVSLIS-RRADMSSNPAKETF 889
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239
TT + P + + ++ + W+ A+ Y++ P + VE P
Sbjct: 890 TTGLDAPRNLRRISQTDNSITLEWRNGKAAA--DTYRIKYAPISGGDHA-EVEVPRSPQT 946
Query: 240 PAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVV 299
+A GL PG Y I V V D+ S P T T P F + + +SL ++
Sbjct: 947 TTKATLTGLRPGTEYGIGVSAVKGDKESDPATINAATDLDPPKDFRV--SELKESSLTLL 1004
Query: 300 WEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
W P ++FD+Y+ +N P + R+ + + GLEPG+ Y +L+ G
Sbjct: 1005 WRTP--LAKFDRYR--LNYGLPSGQPVEVQLPRNATSY--ILRGLEPGQEYTILLTAEKG 1058
Query: 360 K 360
+
Sbjct: 1059 R 1059
|
Extracellular matrix protein implicated in guidance of migrating neurons as well as axons during development, synaptic plasticity as well as neuronal regeneration. Promotes neurite outgrowth from cortical neurons grown on a monolayer of astrocytes. Ligand for integrins alpha-8/beta-1, alpha-9/beta-1, alpha-V/beta-3 and alpha-V/beta-6. Sus scrofa (taxid: 9823) |
| >sp|Q8BYI9|TENR_MOUSE Tenascin-R OS=Mus musculus GN=Tnr PE=1 SV=2 | Back alignment and function description |
|---|
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 117/281 (41%), Gaps = 20/281 (7%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGF 139
+AS++T D PT + V S A + W+PP K LK V KT R+
Sbjct: 497 SASVSTVIDGPTQILVRDVSDTVAFVEWTPP-RAKVDFILLKYGLVGGEGGKTTFRL--- 552
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
+ P + YS++ L PG Y+V + +V + ES A +S FTT+ + P V R T+L
Sbjct: 553 -QPPLSQYSVQALRPGSRYEVSISAVRGTNESEA-SSTQFTTEIDAPKNLRVGSRTATSL 610
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W S + YKV + + +G P + LVPG Y + +
Sbjct: 611 DLEWDNSEAEA--QEYKVVYSTLAGEQYHEVLVPKGIGP-TTKTTLTDLVPGTEYGVGIS 667
Query: 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
V + S P T RT P +S TS SL +W G D Y+++
Sbjct: 668 AVMNSKQSIPATMNARTELDSPRDLMVTASSETSISL--IWTKASG--PIDHYRITFTPS 723
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+S + + R T D LEPG Y + + G+
Sbjct: 724 SGISSEVTVPRDRTSYTLTD----LEPGAEYIISITAERGR 760
|
Neural extracellular matrix (ECM) protein involved in interactions with different cells and matrix components. Theses interactions can influence cellular behavior by either evoking a stable adhesion and differentiation, or repulsion and inhibition of neurite growth. Binding to cell surface gangliosides inhibits RGD-dependent integrin-mediated cell adhesion and results in an inhibition of PTK2/FAK1 (FAK) phosphorylation and cell detachment. Binding to membrane surface sulfatides results in a oligodendrocyte adhesion and differentiation. Interaction with CNTN1 induces a repulsion of neurons and an inhibition of neurite outgrowth. Interacts with SCN2B may play a crucial role in clustering and regulation of activity of sodium channels at nodes of Ranvier. TNR-linked chondroitin sulfate glycosaminoglycans are involved in the interaction with FN1 and mediates inhibition of cell adhesion and neurite outgrowth. The highly regulated addition of sulfated carbohydrate structure may modulate the adhesive properties of TNR over the course of development and during synapse maintenance. Mus musculus (taxid: 10090) |
| >sp|Q05546|TENR_RAT Tenascin-R OS=Rattus norvegicus GN=Tnr PE=1 SV=1 | Back alignment and function description |
|---|
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 117/281 (41%), Gaps = 20/281 (7%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGF 139
+AS++T D PT + V S A + W+PP K LK V KT R+
Sbjct: 496 SASVSTVIDGPTQILVRDVSDTVAFVEWTPP-RAKVDFILLKYGLVGGEGGKTTFRL--- 551
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
+ P + YS++ L PG Y+V + +V + ES A +S FTT+ + P V R T+L
Sbjct: 552 -QPPLSQYSVQALRPGSRYEVSISAVRGTNESDA-SSTQFTTEIDAPKNLRVGSRTATSL 609
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W S + YKV + + +G P + LVPG Y + +
Sbjct: 610 DLEWDNSEAEA--QEYKVVYSTLAGEQYHEVLVPKGIGP-TTKTTLTDLVPGTEYGVGIS 666
Query: 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVR 319
V + S P T RT P +S TS SL +W G D Y+++
Sbjct: 667 AVMNSKQSIPATMNARTELDSPRDLMVTASSETSISL--IWTKASG--PIDHYRITFTPS 722
Query: 320 RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+S + + R T D LEPG Y + + G+
Sbjct: 723 SGISSEVTVPRDRTSYTLTD----LEPGAEYIISITAERGR 759
|
Neural extracellular matrix (ECM) protein involved in interactions with different cells and matrix components. Theses interactions can influence cellular behavior by either evoking a stable adhesion and differentiation, or repulsion and inhibition of neurite growth. Binding to cell surface gangliosides inhibits RGD-dependent integrin-mediated cell adhesion and results in an inhibition of PTK2/FAK1 (FAK) phosphorylation and cell detachment. Binding to membrane surface sulfatides results in a oligodendrocyte adhesion and differentiation. Interaction with CNTN1 induces a repulsion of neurons and an inhibition of neurite outgrowth. Interacts with SCN2B may play a crucial role in clustering and regulation of activity of sodium channels at nodes of Ranvier. TNR-linked chondroitin sulfate glycosaminoglycans are involved in the interaction with FN1 and mediates inhibition of cell adhesion and neurite outgrowth. The highly regulated addition of sulfated carbohydrate structure may modulate the adhesive properties of TNR over the course of development and during synapse maintenance. Rattus norvegicus (taxid: 10116) |
| >sp|P11276|FINC_MOUSE Fibronectin OS=Mus musculus GN=Fn1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 143/355 (40%), Gaps = 27/355 (7%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTSLEEVVHADQSSCTFENLNPGLEYNVSVY-- 1247
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
+ D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1248 -TVKDDKESAPISDTVVPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1306
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T + P
Sbjct: 1307 GI-PIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT---LTQQTAVPPPTD 1362
Query: 191 VWFRN--ETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
+ F N T+ V W P P SI T+ V P E V + P
Sbjct: 1363 LRFTNIGPDTMRVTWAP--PPSIELTNLLVRYSPVKNEEDVAELSIS---PSDNAVVLTN 1417
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG-- 305
L+PG Y +SV +V E S P + +T P F D + IT+NS V W P+
Sbjct: 1418 LLPGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGF--DSSDITANSFTVHWVAPRAPI 1475
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ +V RP P SR+ T + L PG Y V + V+G+
Sbjct: 1476 TGYIIRHHAEHSVGRPRQDRVP--PSRNSITLTN----LNPGTEYVVSIIAVNGR 1524
|
Anastellin binds fibronectin and induces fibril formation. This fibronectin polymer, named superfibronectin, exhibits enhanced adhesive properties. Both anastellin and superfibronectin inhibit tumor growth, angiogenesis and metastasis. Anastellin activates p38 MAPK and inhibits lysophospholipid signaling. Mus musculus (taxid: 10090) |
| >sp|Q91740|FINC_XENLA Fibronectin OS=Xenopus laevis GN=fn1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 134/305 (43%), Gaps = 31/305 (10%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
++LD P+ G P +I S PG +Y + + V + T ++
Sbjct: 1115 FKLDVRPSQGGEAPREVISE---SGSIVISGLTPGVEYTYSISVLTDGVEKDIPITKTVV 1171
Query: 88 TPPDPPTNLSVN-VRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE---NP 143
TP PPTNL + R T ++W IS +G+++ + TP ++ E P
Sbjct: 1172 TPLSPPTNLRLQPSRDSATLTVYWDRSISPGITGYRIS----TTPTPMQVGNSLEEEVGP 1227
Query: 144 PAGYSL-KDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN-TPGKFIVWFRNETTLLV 201
Y + ++L+PG Y V +++V + +ES + P T K+ +T++ +
Sbjct: 1228 SQTYCVFENLSPGVEYNVSVYAVKEEEESAPLSQMFLQEIPQLTDIKYD--DVTDTSIDL 1285
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK--GLVPGRAYNISVQ 259
W P ++I Y++++ A ESV E E GP +K GL PG Y IS+
Sbjct: 1286 RWTPLNSSNI-IGYRITVVA--AGESVPIYE---EFVGPTDGYYKVSGLEPGIDYEISLI 1339
Query: 260 TVSEDEISTPTTAQYRTI--PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSIN 317
T+ S PTT T P L FT +I +++RV W PP E Y V +
Sbjct: 1340 TLINGGESAPTTIIQHTAVPPPTNLRFT----NIGPDNIRVTWSPPTSI-ELSSYLVRYS 1394
Query: 318 -VRRP 321
V++P
Sbjct: 1395 PVKKP 1399
|
Fibronectins bind cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin. Fibronectins are involved in cell adhesion, cell motility, opsonization, wound healing, and maintenance of cell shape. Xenopus laevis (taxid: 8355) |
| >sp|P04937|FINC_RAT Fibronectin OS=Rattus norvegicus GN=Fn1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 141/355 (39%), Gaps = 27/355 (7%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTALEEVVHADQSSCTFENRNPGLEYNVSVY-- 1247
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
+ D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1248 -TVKDDKESAPISDTVIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1306
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T + P
Sbjct: 1307 GI-PIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT---LTQQTAVPPPTD 1362
Query: 191 VWFRN--ETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
+ F N T+ V W P P SI T+ V P E V + P
Sbjct: 1363 LRFTNIGPDTMRVTWAP--PPSIELTNLLVRYSPVKNEEDVAELSIS---PSDNAVVLTN 1417
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG-- 305
L+PG Y +SV +V E S P + +T P F D + +T+NS V W P+
Sbjct: 1418 LLPGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGF--DSSDVTANSFTVHWVAPRAPI 1475
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ + RP P SR+ T + L PG Y V + V+G+
Sbjct: 1476 TGYIIRHHAEHSAGRPRQDRVP--PSRNSITLTN----LNPGTEYIVTIIAVNGR 1524
|
Anastellin binds fibronectin and induces fibril formation. This fibronectin polymer, named superfibronectin, exhibits enhanced adhesive properties. Both anastellin and superfibronectin inhibit tumor growth, angiogenesis and metastasis. Anastellin activates p38 MAPK and inhibits lysophospholipid signaling. Rattus norvegicus (taxid: 10116) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | ||||||
| 340722789 | 1549 | PREDICTED: tyrosine-protein phosphatase | 0.952 | 0.222 | 0.690 | 1e-135 | |
| 328782098 | 1476 | PREDICTED: tyrosine-protein phosphatase | 0.952 | 0.233 | 0.687 | 1e-135 | |
| 380010903 | 1529 | PREDICTED: LOW QUALITY PROTEIN: tyrosine | 0.952 | 0.224 | 0.687 | 1e-135 | |
| 307178534 | 1562 | Tyrosine-protein phosphatase 10D [Campon | 0.955 | 0.220 | 0.680 | 1e-135 | |
| 350418753 | 1559 | PREDICTED: tyrosine-protein phosphatase | 0.952 | 0.220 | 0.684 | 1e-134 | |
| 322799537 | 1528 | hypothetical protein SINV_13485 [Solenop | 0.955 | 0.225 | 0.672 | 1e-133 | |
| 157131409 | 1523 | receptor protein-tyrosine phosphatase 10 | 0.972 | 0.230 | 0.668 | 1e-133 | |
| 195447656 | 1635 | GK25195 [Drosophila willistoni] gi|19416 | 0.988 | 0.218 | 0.660 | 1e-133 | |
| 195041897 | 1990 | GH12596 [Drosophila grimshawi] gi|193901 | 0.969 | 0.175 | 0.673 | 1e-133 | |
| 198471502 | 1955 | GA14821 [Drosophila pseudoobscura pseudo | 0.988 | 0.182 | 0.660 | 1e-133 |
| >gi|340722789|ref|XP_003399784.1| PREDICTED: tyrosine-protein phosphatase 10D-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/355 (69%), Positives = 289/355 (81%), Gaps = 11/355 (3%)
Query: 9 HGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFY 68
+ A+L I+IP NLS S YRLDY PA G+PPPNTT + DI D I+F +GLPGT+Y+F+
Sbjct: 36 YSADLAIEIPGNLSQGGSWYRLDYSPAVGYPPPNTTIAATDIGDVIKFKDGLPGTRYEFW 95
Query: 69 LYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128
LYY+NST+HDWLTWTASITT PDPP+NL+V+VR+GKTA ++WSPP G YSGF+L+V S
Sbjct: 96 LYYSNSTLHDWLTWTASITTAPDPPSNLTVSVRNGKTAIVYWSPPAQGNYSGFRLRVQSF 155
Query: 129 SEKTPPRIIGFTENPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
S+ P+ T PA Y L+DL PG +Y +QLF+V D+KESVAYTSRNFTTKPNT
Sbjct: 156 SDTGNPK----TSVIPADAVPYVLRDLIPGATYSLQLFTVLDTKESVAYTSRNFTTKPNT 211
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
PGKFIVWFRNETTLLVLWQP YPA IYTHYKVSIDP DA ESVLYVEKEGEPPGPAQAAF
Sbjct: 212 PGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIDPADAIESVLYVEKEGEPPGPAQAAF 271
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
KGLVPGRAYNISVQTVSEDE S PTTAQYRT+PLRPL+ T+DK+SITSNS RV W P+G
Sbjct: 272 KGLVPGRAYNISVQTVSEDETSAPTTAQYRTVPLRPLNVTFDKSSITSNSFRVFWNRPEG 331
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQ+S+ R A P+T++RD+ ++ + + LEPG+TYQV+VKTVSGK
Sbjct: 332 NSEFDKYQISLGGNRRLA---PVTRNRDDESKWEFKD-LEPGKTYQVVVKTVSGK 382
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328782098|ref|XP_003250083.1| PREDICTED: tyrosine-protein phosphatase 10D-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/355 (68%), Positives = 289/355 (81%), Gaps = 11/355 (3%)
Query: 9 HGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFY 68
+ A+L I+IP NLS S YRLDY PA G+PPPNTT + DI D I+F +GLPGTKY+F+
Sbjct: 31 YSADLAIEIPGNLSQGGSWYRLDYSPAVGYPPPNTTIAAIDIGDVIKFKDGLPGTKYEFW 90
Query: 69 LYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128
LYY+NS++HDWLTWTASITT PDPP+NL+V+VR+GKTA ++W+PP G YSGF+L+V S
Sbjct: 91 LYYSNSSLHDWLTWTASITTAPDPPSNLTVSVRNGKTAIVYWAPPAQGNYSGFRLRVQSF 150
Query: 129 SEKTPPRIIGFTENPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
S+ P+ T PA Y L+DL PG +Y +QLF+V D+KESVAYTSRNFTTKPNT
Sbjct: 151 SDTGNPK----TSVIPADAVPYVLRDLIPGATYSLQLFTVLDTKESVAYTSRNFTTKPNT 206
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
PGKFIVWFRNETTLLVLWQP YPA IYTHYKVSIDP DA ESVLYVEKEGEPPGPAQAAF
Sbjct: 207 PGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIDPADAIESVLYVEKEGEPPGPAQAAF 266
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
KGLVPGRAYNISVQTVSEDE STPTTAQYRT+PLRPL+ T+DK SITS S RV W PP+G
Sbjct: 267 KGLVPGRAYNISVQTVSEDETSTPTTAQYRTVPLRPLNVTFDKPSITSTSFRVFWNPPEG 326
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQ+S+ + A P+T++RD+ ++ + + LEPG+TYQV+VKTVSGK
Sbjct: 327 MSEFDKYQISLGGNKRLA---PVTRNRDDESKWEFKD-LEPGKTYQVVVKTVSGK 377
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380010903|ref|XP_003689555.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein phosphatase 10D-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/355 (68%), Positives = 289/355 (81%), Gaps = 11/355 (3%)
Query: 9 HGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFY 68
+ A+L I+IP NLS S YRLDY PA G+PPPNTT + DI D I+F +GLPGTKY+F+
Sbjct: 14 YSADLAIEIPGNLSQGGSWYRLDYSPAVGYPPPNTTIAAIDIGDVIKFKDGLPGTKYEFW 73
Query: 69 LYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128
LYY+NS++HDWLTWTASITT PDPP+NL+V+VR+GKTA ++W+PP G YSGF+L+V S
Sbjct: 74 LYYSNSSLHDWLTWTASITTAPDPPSNLTVSVRNGKTAIVYWAPPAQGNYSGFRLRVQSF 133
Query: 129 SEKTPPRIIGFTENPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
S+ P+ T PA Y L+DL PG +Y +QLF+V D+KESVAYTSRNFTTKPNT
Sbjct: 134 SDTGNPK----TSVIPADAVPYVLRDLIPGATYSLQLFTVLDTKESVAYTSRNFTTKPNT 189
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
PGKFIVWFRNETTLLVLWQP YPA IYTHYKVSIDP DA ESVLYVEKEGEPPGPAQAAF
Sbjct: 190 PGKFIVWFRNETTLLVLWQPXYPAGIYTHYKVSIDPADAIESVLYVEKEGEPPGPAQAAF 249
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
KGLVPGRAYNISVQTVSEDE STPTTAQYRT+PLRPL+ T+DK SITS S RV W PP+G
Sbjct: 250 KGLVPGRAYNISVQTVSEDETSTPTTAQYRTVPLRPLNVTFDKPSITSTSFRVFWNPPEG 309
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQ+S+ + A P+T++RD+ ++ + + LEPG+TYQV+VKTVSGK
Sbjct: 310 MSEFDKYQISLGGNKRLA---PVTRNRDDESKWEFKD-LEPGKTYQVVVKTVSGK 360
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307178534|gb|EFN67223.1| Tyrosine-protein phosphatase 10D [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/354 (68%), Positives = 288/354 (81%), Gaps = 9/354 (2%)
Query: 9 HGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFY 68
+ A+L I+IP NLS S YRLDY P G PPPNTT + +I D I+F +GLPGT+Y+++
Sbjct: 41 YSADLAIEIPGNLSQGGSWYRLDYSPNVGSPPPNTTIAATEIGDVIKFKDGLPGTRYEYW 100
Query: 69 LYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128
LYY+NST+HDWLTWTASITTPPDPP+NL+V+VR+GKTA ++WSPP+ G YSGF+L+ S
Sbjct: 101 LYYSNSTLHDWLTWTASITTPPDPPSNLTVSVRNGKTAIVYWSPPVQGNYSGFRLRTQSF 160
Query: 129 SEKTPPR--IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
S+ P+ +I P Y+L+DLTPG +Y +QLF+V D+KESVAYTSRNFTTKPNTP
Sbjct: 161 SDTGNPKTSVIPVDSVP---YTLRDLTPGATYSLQLFTVLDAKESVAYTSRNFTTKPNTP 217
Query: 187 GKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK 246
GKFIVWFRNETTLLVLWQP YPA IYTHYKVSIDPPDA ESVLYVEKEGEPPGPAQAAFK
Sbjct: 218 GKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIDPPDAIESVLYVEKEGEPPGPAQAAFK 277
Query: 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF 306
GLVPGRAYNISV TVSEDE S PTTAQYRT+PLRPL+ T+DK+SITS S R+ W PP G
Sbjct: 278 GLVPGRAYNISVHTVSEDETSAPTTAQYRTVPLRPLNVTFDKSSITSTSFRMFWNPPNGT 337
Query: 307 SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQ+S+ R A P+T++RD+ + + + LEPG+TYQV+VKTVSGK
Sbjct: 338 SEFDKYQISLGSNRRLA---PVTRNRDDENRWEFKD-LEPGKTYQVVVKTVSGK 387
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350418753|ref|XP_003491955.1| PREDICTED: tyrosine-protein phosphatase 10D-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/355 (68%), Positives = 288/355 (81%), Gaps = 11/355 (3%)
Query: 9 HGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFY 68
+ A+L I+IP NLS S YRLDY PA G+PPPNTT + DI D I+F +GLPGT+Y+F+
Sbjct: 36 YSADLAIEIPGNLSQGGSWYRLDYSPAVGYPPPNTTIAATDIGDVIKFKDGLPGTRYEFW 95
Query: 69 LYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128
LYY+NST+HDWLTWTASITT PDPP+NL+V+VR+GKTA ++W+PP G YSGF+L+V S
Sbjct: 96 LYYSNSTLHDWLTWTASITTAPDPPSNLTVSVRNGKTAIVYWAPPAQGNYSGFRLRVQSF 155
Query: 129 SEKTPPRIIGFTENPPAG---YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
S+ P+ T PA Y L+DL PG +Y +QLF+V D+KESVAYTSRNFTTKPNT
Sbjct: 156 SDTGNPK----TSVIPADAVPYVLRDLIPGATYSLQLFTVLDTKESVAYTSRNFTTKPNT 211
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
PGKFIVWFRNETTLLVLWQP YPA IYTHYKVSIDP DA ESVLYVEKEGEPPGPAQAAF
Sbjct: 212 PGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIDPADAIESVLYVEKEGEPPGPAQAAF 271
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
KGLVPGRAYNISVQTVSEDE S PTTAQYRT+PLRPL+ T+DK+SITS S RV W P+G
Sbjct: 272 KGLVPGRAYNISVQTVSEDETSAPTTAQYRTVPLRPLNVTFDKSSITSTSFRVFWNRPEG 331
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQ+S+ R A P+T++RD+ ++ + + LEPG+TYQV+VKTVSGK
Sbjct: 332 NSEFDKYQISLGGNRRLA---PVTRNRDDESKWEFKD-LEPGKTYQVVVKTVSGK 382
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322799537|gb|EFZ20845.1| hypothetical protein SINV_13485 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/354 (67%), Positives = 287/354 (81%), Gaps = 9/354 (2%)
Query: 9 HGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFY 68
+ A+L I+IP NLS S YRLDY P G PPPNTT + DI D I+F +GLPGT+Y+++
Sbjct: 3 YSADLAIEIPGNLSQGGSWYRLDYSPPVGSPPPNTTIAATDIGDVIKFRDGLPGTRYEYW 62
Query: 69 LYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128
LYY+NST+HDWLTWTASITTPPDPP+NL+V+VR+GKTA ++WSPP G YSGF+L+ S
Sbjct: 63 LYYSNSTLHDWLTWTASITTPPDPPSNLTVSVRNGKTAIVYWSPPAQGNYSGFRLRTQSF 122
Query: 129 SEKTPPR--IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
S+ P+ +I P Y+L+DLTPG +Y +QLF+V D+KESVAYTSRNFTTKPN P
Sbjct: 123 SDTGNPKTTVIPVDSVP---YTLRDLTPGATYSLQLFTVLDAKESVAYTSRNFTTKPNIP 179
Query: 187 GKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK 246
GKFIVWFRNETTLLVLWQP YPA IYTHYK+SI+PPDA ESVLYVEKEGEPPGPAQAAFK
Sbjct: 180 GKFIVWFRNETTLLVLWQPPYPAGIYTHYKISINPPDAIESVLYVEKEGEPPGPAQAAFK 239
Query: 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF 306
GL+PGRAY+ISVQTVSEDE S PTTAQYRT+PLRPL+ T+DK+SITS S R+ W PP G
Sbjct: 240 GLIPGRAYDISVQTVSEDETSAPTTAQYRTVPLRPLNVTFDKSSITSTSFRMFWNPPNGT 299
Query: 307 SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQ+S+ R A P+T++RD+ + + + LEPG+TYQV+VKTVSGK
Sbjct: 300 SEFDKYQISLGSNRRLA---PVTRNRDDENRWEFKD-LEPGKTYQVVVKTVSGK 349
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157131409|ref|XP_001662235.1| receptor protein-tyrosine phosphatase 10d [Aedes aegypti] gi|108871560|gb|EAT35785.1| AAEL012083-PA, partial [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/353 (66%), Positives = 273/353 (77%), Gaps = 2/353 (0%)
Query: 8 VHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDF 67
GA+LVI+IP NL D S YRLDY P G+P PN T SRD+ D I+FS GLPGT+Y+F
Sbjct: 10 CRGADLVIEIPGNLGQDGSYYRLDYYPPIGNPAPNATIASRDVGDEIQFSNGLPGTRYNF 69
Query: 68 YLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVIS 127
+LYYTNST HDWLTWT SITT PDPP+NLSV VRSGK A I WSPP G YS FKLK++
Sbjct: 70 WLYYTNSTHHDWLTWTVSITTAPDPPSNLSVAVRSGKNAIINWSPPSQGNYSAFKLKILG 129
Query: 128 LSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPG 187
LS+ E+ + L+DLTPG +YQVQ ++V+D KESVAYTSRNFTTKPNTPG
Sbjct: 130 LSDNFSTNQTVAVEDNQFQHVLRDLTPGATYQVQAYTVFDGKESVAYTSRNFTTKPNTPG 189
Query: 188 KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247
KFIVWFRNETTLLVLWQP YPA IYTHYKVSI+PPDA SVLYV+KEGEPPGPAQAAFKG
Sbjct: 190 KFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDALGSVLYVQKEGEPPGPAQAAFKG 249
Query: 248 LVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFS 307
LVPGRAYNISVQT+SEDEIS PTTAQYRT+PLRPL+ T+DK +IT N+ +V+WE PKG S
Sbjct: 250 LVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDKKTITENAFKVMWEAPKGIS 309
Query: 308 EFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
EFDKYQVS+ R + + + + LEPG+TYQV+VKT+SGK
Sbjct: 310 EFDKYQVSVAAARRQVQV--MRNDNENMAWLEFKDSLEPGKTYQVVVKTLSGK 360
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195447656|ref|XP_002071311.1| GK25195 [Drosophila willistoni] gi|194167396|gb|EDW82297.1| GK25195 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/365 (66%), Positives = 281/365 (76%), Gaps = 8/365 (2%)
Query: 1 MYIIVHGV---HGANLVIKIPENLS-SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEF 56
MY+ V+ H A+L I IP N D ++YRLDY P G+P PNTT SRDI D I+F
Sbjct: 29 MYLCVYNCQHAHCADLAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASRDIGDEIQF 88
Query: 57 SEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG 116
S LPGTKY+F+LYYTN T HDWLTWT +ITT PDPP+NLSV VRSGK A I WSPP G
Sbjct: 89 SRALPGTKYNFWLYYTNLTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQG 148
Query: 117 KYSGFKLKVISLSEKTPPRIIGFTENPPA-GYSLKDLTPGGSYQVQLFSVYDSKESVAYT 175
Y+ FK+KV+ LSE + F N +S+K+LTPG +YQVQ +++YD KESVAYT
Sbjct: 149 SYTAFKIKVLGLSEASSSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYT 208
Query: 176 SRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEG 235
SRNFTTKPNTPGKFIVWFRNETTLLVLWQP YPA IYTHYKVSI+PPDA +SVLYVEKEG
Sbjct: 209 SRNFTTKPNTPGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEG 268
Query: 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNS 295
EPPGPAQAAFKGLVPGRAYNISVQT+SEDEIS PTTAQYRT+PLRPL+ T+DK ITSNS
Sbjct: 269 EPPGPAQAAFKGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDKDHITSNS 328
Query: 296 LRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355
RV+WE PKG SEFDKYQVS+ R ++ +++S + D + EPG+T+ V+VK
Sbjct: 329 FRVLWEAPKGVSEFDKYQVSVATTRRQST---VSRSNEPVAYFDFRDIAEPGKTFNVIVK 385
Query: 356 TVSGK 360
TVSGK
Sbjct: 386 TVSGK 390
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195041897|ref|XP_001991335.1| GH12596 [Drosophila grimshawi] gi|193901093|gb|EDV99959.1| GH12596 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/355 (67%), Positives = 276/355 (77%), Gaps = 5/355 (1%)
Query: 8 VHGANLVIKIPENLS-SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYD 66
HGA+L I IP N D ++YRLDY P G+P PNTT SRDI D I+FS LPGTKY+
Sbjct: 56 AHGADLAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASRDIGDEIQFSRALPGTKYN 115
Query: 67 FYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVI 126
F+LYYTN T HDWLTWT +ITT PDPP+NLSV VRSGK A I WSPP G Y+ FK+KV+
Sbjct: 116 FWLYYTNFTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYTAFKIKVL 175
Query: 127 SLSEKTPPRIIGFTENPPA-GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
LSE + F N +S+K+LTPG +YQVQ +++YD KESVAYTSRNFTTKPNT
Sbjct: 176 GLSEASSSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNT 235
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
PGKFIVWFRNETTLLVLWQP YPA IYTHYKVSI+PPDA +SVLYVEKEGEPPGPAQAAF
Sbjct: 236 PGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAF 295
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
KGLVPGRAYNISVQT+SEDEIS PTTAQYRT+PLRPL+ T+DK ITSNS RV+WE PKG
Sbjct: 296 KGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDKDFITSNSFRVLWEAPKG 355
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQVS+ R + + +S + D + +EPG+T+ V+VKTVSGK
Sbjct: 356 VSEFDKYQVSVATTR---RQSTVARSNEPIAFFDFRDIVEPGKTFNVIVKTVSGK 407
|
Source: Drosophila grimshawi Species: Drosophila grimshawi Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|198471502|ref|XP_001355649.2| GA14821 [Drosophila pseudoobscura pseudoobscura] gi|198145945|gb|EAL32708.2| GA14821 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/362 (66%), Positives = 280/362 (77%), Gaps = 5/362 (1%)
Query: 1 MYIIVHGVHGANLVIKIPENLS-SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEG 59
+Y+ + V A+L I IP N D ++YRLDY P G+P PNTT SRDI D I+FS
Sbjct: 6 LYVSLQDVRCADLAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASRDIGDEIQFSRA 65
Query: 60 LPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYS 119
LPGTKY+F+LYYTN T HDWLTWT +ITT PDPP+NLSV VRSGK A I WSPP G Y+
Sbjct: 66 LPGTKYNFWLYYTNFTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYT 125
Query: 120 GFKLKVISLSEKTPPRIIGFTENPPA-GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178
FK+KV+ LSE + F N +S+K+LTPG +YQVQ +++YD KESVAYTSRN
Sbjct: 126 AFKIKVLGLSEASSSFNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRN 185
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
FTTKPNTPGKFIVWFRNETTLLVLWQP YPA IYTHYKVSI+PPDA +SVLYVEKEGEPP
Sbjct: 186 FTTKPNTPGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPP 245
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRV 298
GPAQAAFKGLVPGRAYNISVQT+SEDEIS PTTAQYRT+PLRPL+ T+D+ ITSNS RV
Sbjct: 246 GPAQAAFKGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRV 305
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
+WE PKG SEFDKYQVS+ R ++ +T+S + D + EPG+T+ V+VKTVS
Sbjct: 306 LWEAPKGISEFDKYQVSVATTRRQST---VTRSNEPIAYFDFRDIAEPGKTFNVIVKTVS 362
Query: 359 GK 360
GK
Sbjct: 363 GK 364
|
Source: Drosophila pseudoobscura pseudoobscura Species: Drosophila pseudoobscura Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | ||||||
| FB|FBgn0004370 | 1631 | Ptp10D "Protein tyrosine phosp | 0.969 | 0.214 | 0.670 | 6.1e-126 | |
| FB|FBgn0004368 | 1767 | Ptp4E "Protein tyrosine phosph | 0.983 | 0.200 | 0.593 | 1.4e-107 | |
| MGI|MGI:97809 | 1998 | Ptprb "protein tyrosine phosph | 0.803 | 0.145 | 0.278 | 6.7e-15 | |
| UNIPROTKB|E1BKN2 | 1358 | TNR "Uncharacterized protein" | 0.803 | 0.213 | 0.292 | 2.1e-14 | |
| UNIPROTKB|F1SS24 | 2478 | FN1 "Uncharacterized protein" | 0.880 | 0.128 | 0.249 | 7.1e-14 | |
| UNIPROTKB|F1S706 | 1358 | TNR "Uncharacterized protein" | 0.803 | 0.213 | 0.288 | 1e-13 | |
| UNIPROTKB|Q92752 | 1358 | TNR "Tenascin-R" [Homo sapiens | 0.811 | 0.215 | 0.288 | 1.7e-13 | |
| MGI|MGI:95566 | 2477 | Fn1 "fibronectin 1" [Mus muscu | 0.914 | 0.133 | 0.252 | 4.5e-13 | |
| UNIPROTKB|F1NJT3 | 2483 | FN1 "Fibronectin" [Gallus gall | 0.775 | 0.112 | 0.25 | 4.5e-13 | |
| MGI|MGI:99516 | 1358 | Tnr "tenascin R" [Mus musculus | 0.806 | 0.214 | 0.283 | 6.3e-13 |
| FB|FBgn0004370 Ptp10D "Protein tyrosine phosphatase 10D" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
Identities = 238/355 (67%), Positives = 275/355 (77%)
Query: 8 VHGANLVIKIPENLS-SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYD 66
V A+L I IP N D ++YRLDY P G+P PNTT SR+I D I+FS LPGTKY+
Sbjct: 40 VRCADLAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASREIGDEIQFSRALPGTKYN 99
Query: 67 FYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVI 126
F+LYYTN T HDWLTWT +ITT PDPP+NLSV VRSGK A I WSPP G Y+ FK+KV+
Sbjct: 100 FWLYYTNFTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYTAFKIKVL 159
Query: 127 SLSEKTPPRIIGFTENPPA-GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
LSE + F N +S+K+LTPG +YQVQ +++YD KESVAYTSRNFTTKPNT
Sbjct: 160 GLSEASSSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNT 219
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
PGKFIVWFRNETTLLVLWQP YPA IYTHYKVSI+PPDA +SVLYVEKEGEPPGPAQAAF
Sbjct: 220 PGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAF 279
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG 305
KGLVPGRAYNISVQT+SEDEIS PTTAQYRT+PLRPL+ T+D+ ITSNS RV+WE PKG
Sbjct: 280 KGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKG 339
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
SEFDKYQVS+ R ST + +S + D + EPG+T+ V+VKTVSGK
Sbjct: 340 ISEFDKYQVSVATTR--RQST-VPRSNEPVAFFDFRDIAEPGKTFNVIVKTVSGK 391
|
|
| FB|FBgn0004368 Ptp4E "Protein tyrosine phosphatase 4E" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1073 (382.8 bits), Expect = 1.4e-107, P = 1.4e-107
Identities = 213/359 (59%), Positives = 262/359 (72%)
Query: 1 MYIIVHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL 60
+++ H + A+LVI +P S+ N+ YR+DY G P PNTT + DI +I+ S L
Sbjct: 63 IFLARHA-NAADLVINVPNASSNANAFYRIDYSAPFGFPEPNTTIPASDIGKDIKNSRAL 121
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG 120
PGT+Y+F+LYYTNST + LTWT +ITT PDPP NLSV +RS K+A I W PP SG+YSG
Sbjct: 122 PGTEYNFWLYYTNSTHREQLTWTVNITTAPDPPANLSVQLRSSKSAFITWRPPGSGRYSG 181
Query: 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
F+++V+ L++ R N S K+LTPGGSYQVQ +SVY KESVAYTSRNFT
Sbjct: 182 FRIRVLGLTDLPFERSYSLEGNETLQLSAKELTPGGSYQVQAYSVYQGKESVAYTSRNFT 241
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240
TKPNTPGKFIVWFRNETTLLVLWQP +PA IYTHY+VSI P DA +SVLYVE+EGEPPGP
Sbjct: 242 TKPNTPGKFIVWFRNETTLLVLWQPPFPAGIYTHYRVSITPDDAIQSVLYVEREGEPPGP 301
Query: 241 AQAAFKGLVPGRAYNISVQTVSEDEIST-PTTAQYRTIPLRPLSFTYDKASITSNSLRVV 299
AQAAFKGLVPGR YNISVQTVSEDE S+ PTTA+Y T L+ T+D+A TS+S RV
Sbjct: 302 AQAAFKGLVPGREYNISVQTVSEDETSSVPTTARYLTYRSAWLNVTFDEAYTTSSSFRVR 361
Query: 300 WEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
WEPP+ +SEFD YQV ++ R + P + D D S+ LEPGRTY+V+VKT++
Sbjct: 362 WEPPRTYSEFDAYQVMLSTSRR-IFNVPRAANGDS-VYFDYSDILEPGRTYEVVVKTIA 418
|
|
| MGI|MGI:97809 Ptprb "protein tyrosine phosphatase, receptor type, B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 222 (83.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 89/319 (27%), Positives = 143/319 (44%)
Query: 46 VSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT--TPPDPPTNLSVNVRSG 103
+S+D K+ F++ +PG Y T +++ L ++SI T P T+L VN G
Sbjct: 514 LSKDAKE-FTFTDLMPGRNYKA----TVTSMSGDLKQSSSIKGRTVPAQVTDLHVN-NQG 567
Query: 104 KTAQIF--WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161
T+ +F W+ + G ++ V+ + E + + + + YS + L PG Y V
Sbjct: 568 MTSSLFTNWTKAL-GDVEFYQ--VLLIHENVVVKNESVSSDT-SRYSFRALKPGSLYSVV 623
Query: 162 LFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP 221
+ +V S + T + G + L V W P+ P + HY VS+
Sbjct: 624 VTTVSGGISSRQVVAEGRTVPSSVSGVTVNNSGRNDYLSVSWLPA-PGEV-DHYVVSLSH 681
Query: 222 PDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
+ L + K ++ +F L PGR YN++V T S + S T + RT+P +
Sbjct: 682 EGKVDQFLIIAKS-----VSECSFSSLTPGRLYNVTVTTKSGNYASHSFTEE-RTVPDKV 735
Query: 282 LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS 341
+ S S+ L+V W G +FD Y+V+I R + I KS +E C+
Sbjct: 736 QGISVSN-SARSDYLKVSWVHATG--DFDHYEVTIKNRESFIQTKTIPKSENE---CEFI 789
Query: 342 EGLEPGRTYQVLVKTVSGK 360
E L PGR Y V V T SG+
Sbjct: 790 E-LVPGRLYSVTVSTKSGQ 807
|
|
| UNIPROTKB|E1BKN2 TNR "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 216 (81.1 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 92/315 (29%), Positives = 133/315 (42%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT++ V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTHILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
W+PP K LK V KT R+ + P + YS++ L PG Y+V + +V
Sbjct: 524 WTPP-RAKVDFILLKYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSRYEVWVSAVR 578
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ ES A T+ FTT+ + P V R T+L + W S A + YKV +
Sbjct: 579 GTNESEA-TATQFTTEIDAPKNLRVGSRTATSLELEWDNS-EAEVQ-EYKVEYSTLAGEQ 635
Query: 227 -SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFT 285
L V K P ++A LVPG Y I + + + S P T RT P
Sbjct: 636 YHELLVPKTIGPT--SRATLTDLVPGTEYGIGISAIMNSQQSVPATMNARTELDSPRDLM 693
Query: 286 YDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLE 345
+S TS SL +W G D Y+++ AS + K R T D LE
Sbjct: 694 VTASSETSISL--IWTKASG--PIDHYRITFTPSSGIASEVTVPKDRTSYTLTD----LE 745
Query: 346 PGRTYQVLVKTVSGK 360
PG Y + + G+
Sbjct: 746 PGAEYIISITAERGR 760
|
|
| UNIPROTKB|F1SS24 FN1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 214 (80.4 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 87/349 (24%), Positives = 152/349 (43%)
Query: 22 SSDN-STYRLDY-IPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79
+SD S +R++Y + G P S NI + LPG KY +Y +
Sbjct: 744 ASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIP--DLLPGRKYIVNVYQISEEGEQS 801
Query: 80 LTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
L + S TT PD P + +V+ + + WS P +G+++ V S S + +
Sbjct: 802 LILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP-QAPITGYRI-VYSPSVEGSSTELNL 859
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT---KPNT--PGKFIVWFR 194
E + +L DL PG Y + +++V +++ES + TT +P+ P K + +
Sbjct: 860 PETANS-VTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTGVPRPDKVPPPKDLQFVE 918
Query: 195 -NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK---GLVP 250
+ + ++W P P S T Y+V + P + P + G+ ++ F GL P
Sbjct: 919 VTDVKVTIMWTP--PESPVTGYRVDVIPVNLPG------EHGQRLPISRNTFAEVTGLSP 970
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD 310
G Y+ V V++ S P TAQ T P + + + T +++ V W PP+ +
Sbjct: 971 GVTYHFKVFAVNQGRESKPLTAQQTTKLDAPTNLQF--INETDSTVMVTWTPPR--ARIA 1026
Query: 311 KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
Y++++ + R G P + + L+PG Y V + V G
Sbjct: 1027 GYRLTVGLTRGGQ---PKQYNVGPSASQYLLRNLQPGSEYAVTLVAVKG 1072
|
|
| UNIPROTKB|F1S706 TNR "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 91/315 (28%), Positives = 132/315 (41%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT + V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTQILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
W+PP K L+ V KT R+ + P + YS++ L PG YQV + +V
Sbjct: 524 WTPP-RAKVDFILLRYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSQYQVWVSAVR 578
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ ES + T++ FTT+ + P V R T+L + W S A + YKV +
Sbjct: 579 GTNESESTTTQ-FTTEIDAPKNLRVGSRTATSLDLEWDNS-EAEVQ-EYKVVYSTLAGEQ 635
Query: 227 -SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFT 285
L V K P +A LVPG Y + + V + S P T RT P
Sbjct: 636 YHELMVPKSIGPT--TRATLTDLVPGTEYGVGISAVMSSQQSVPATMNARTELDSPRDLM 693
Query: 286 YDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLE 345
+S TS SL +W G D Y+++ AS + K R T D LE
Sbjct: 694 VTASSETSISL--IWTKASG--PIDHYRITFTPSSGIASEVTVPKDRTSYTLTD----LE 745
Query: 346 PGRTYQVLVKTVSGK 360
PG Y + + G+
Sbjct: 746 PGAEYIISITAERGR 760
|
|
| UNIPROTKB|Q92752 TNR "Tenascin-R" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 90/312 (28%), Positives = 127/312 (40%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT + V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTQILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG-YSLKDLTPGGSYQVQLFSVYDS 168
W PP K LK L R F PP YS++ L PG Y+V + +V +
Sbjct: 524 WIPP-RAKVDFILLKY-GLVGGEGGRTT-FRLQPPLSQYSVQALRPGSRYEVSVSAVRGT 580
Query: 169 KESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV 228
ES + T++ FTT+ + P V R T+L + W S A + YKV +
Sbjct: 581 NESDSATTQ-FTTEIDAPKNLRVGSRTATSLDLEWDNS-EAEVQ-EYKVVYSTLAGEQYH 637
Query: 229 LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDK 288
+ G P +A LVPG Y + + V + S P T RT P
Sbjct: 638 EVLVPRGIGP-TTRATLTDLVPGTEYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTA 696
Query: 289 ASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGR 348
+S TS SL +W G D Y+++ AS + K R T D LEPG
Sbjct: 697 SSETSISL--IWTKASG--PIDHYRITFTPSSGIASEVTVPKDRTSYTLTD----LEPGA 748
Query: 349 TYQVLVKTVSGK 360
Y + V G+
Sbjct: 749 EYIISVTAERGR 760
|
|
| MGI|MGI:95566 Fn1 "fibronectin 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 207 (77.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 89/353 (25%), Positives = 140/353 (39%)
Query: 13 LVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT 72
L + + + D + YR+ P +G + V + + F PG +Y+ +Y
Sbjct: 1190 LTVSWERSTTPDITGYRITTTPTNGQQGTSLEEVVHADQSSCTFENLNPGLEYNVSVYTV 1249
Query: 73 NSTVHDWLTWTASITTPPDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE 130
D + S T P+ P T+LS + + + W+P S G+++ V++ E
Sbjct: 1250 KD---DKESAPISDTVVPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGE 1306
Query: 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFI 190
P F ++ Y++ L PG Y + + ++ + ES T T P P
Sbjct: 1307 GIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVP-PPTDLR 1364
Query: 191 VWFRNETTLLVLWQPSYPASI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
T+ V W P P SI T+ V P E V E P A L+
Sbjct: 1365 FTNIGPDTMRVTWAP--PPSIELTNLLVRYSPVKNEEDV--AELSISPSDNA-VVLTNLL 1419
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG--FS 307
PG Y +SV +V E S P + +T P F D + IT+NS V W P+
Sbjct: 1420 PGTEYLVSVSSVYEQHESIPLRGRQKTGLDSPTGF--DSSDITANSFTVHWVAPRAPITG 1477
Query: 308 EFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ +V RP P SR+ T + L PG Y V + V+G+
Sbjct: 1478 YIIRHHAEHSVGRPRQDRVP--PSRNSITLTN----LNPGTEYVVSIIAVNGR 1524
|
|
| UNIPROTKB|F1NJT3 FN1 "Fibronectin" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 207 (77.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 76/304 (25%), Positives = 132/304 (43%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFK 122
T++DF T + + ++ ++ PP T+ SV + + + W S SGF+
Sbjct: 698 TRFDFTTTSTTAVTSNTVSGETTLL-PPMVATSESVTEITASSFVVSWVSA-SDTVSGFR 755
Query: 123 LKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182
++ E P+ + + ++ DL PG Y V ++ + + E S + TT
Sbjct: 756 VEYELSEEGDEPQYLDLPSTATS-VNIPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTA 814
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
P+ P + V ++T++++ W S P + T Y++ P S + P
Sbjct: 815 PDAPPEHSVESVDDTSIVISW--SRPQAPITGYRIVYTPSVEGSST----ELNLPDTATS 868
Query: 243 AAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT--IPLR---PLSFTYDKASITSNSLR 297
L+PG YNIS+ V E + STP Q T +P P ++ +
Sbjct: 869 VTLSDLMPGVQYNISIYAVEEHQESTPVFIQQETTGVPRTDEVPSPKDLQFVEVSDVKVT 928
Query: 298 VVWEPPKGFSEFDKYQV-SINVRRPG--ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
++W PP+ S+ Y+V +I V RPG PIT+S + ++ + L PG TY +
Sbjct: 929 IMWTPPQ--SQVSGYRVEAIPVNRPGQHGQRLPITRS----SFAEVVD-LLPGTTYLFKI 981
Query: 355 KTVS 358
VS
Sbjct: 982 FAVS 985
|
|
| MGI|MGI:99516 Tnr "tenascin R" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 203 (76.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 89/314 (28%), Positives = 133/314 (42%)
Query: 52 DNIEFSE-GL-PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIF 109
D F++ GL PG +Y + T +AS++T D PT + V S A +
Sbjct: 465 DVTSFNQTGLKPGEEYIVNVVALKEQARSPPT-SASVSTVIDGPTQILVRDVSDTVAFVE 523
Query: 110 WSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166
W+PP K LK V KT R+ + P + YS++ L PG Y+V + +V
Sbjct: 524 WTPP-RAKVDFILLKYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSRYEVSISAVR 578
Query: 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE 226
+ ES A +S FTT+ + P V R T+L + W S + YKV +
Sbjct: 579 GTNESEA-SSTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEA--QEYKVVYSTLAGEQ 635
Query: 227 SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTY 286
+ +G P + LVPG Y + + V + S P T RT P
Sbjct: 636 YHEVLVPKGIGP-TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMV 694
Query: 287 DKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEP 346
+S TS SL +W G D Y+++ G SS +T RD T +++ LEP
Sbjct: 695 TASSETSISL--IWTKASG--PIDHYRITFTPSS-GISSE-VTVPRDR-TSYTLTD-LEP 746
Query: 347 GRTYQVLVKTVSGK 360
G Y + + G+
Sbjct: 747 GAEYIISITAERGR 760
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 361 | |||
| pfam00041 | 84 | pfam00041, fn3, Fibronectin type III domain | 3e-08 | |
| cd00063 | 93 | cd00063, FN3, Fibronectin type 3 domain; One of th | 9e-07 | |
| pfam00041 | 84 | pfam00041, fn3, Fibronectin type III domain | 5e-06 | |
| smart00060 | 83 | smart00060, FN3, Fibronectin type 3 domain | 2e-05 | |
| pfam00041 | 84 | pfam00041, fn3, Fibronectin type III domain | 3e-05 | |
| cd00063 | 93 | cd00063, FN3, Fibronectin type 3 domain; One of th | 6e-05 | |
| cd00063 | 93 | cd00063, FN3, Fibronectin type 3 domain; One of th | 0.001 | |
| smart00060 | 83 | smart00060, FN3, Fibronectin type 3 domain | 0.002 |
| >gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 3e-08
Identities = 21/85 (24%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P V T+L + W P T Y+V P + E + P
Sbjct: 3 PTNLTVTDVTSTSLTLSWSPPPGNGPITGYEVEYRPVNGGEEWKEIT---VPGTTTSYTL 59
Query: 246 KGLVPGRAYNISVQTVSEDEISTPT 270
GL PG Y + VQ V+ P+
Sbjct: 60 TGLKPGTEYEVRVQAVNGAGEGPPS 84
|
Length = 84 |
| >gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 9e-07
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPP--ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P PPTNL V + + + W+PP G +G+ ++ + + T Y
Sbjct: 1 PSPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDW-KEVEVTPGSETSY 59
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+L L PG Y+ ++ +V ES S TT
Sbjct: 60 TLTGLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93 |
| >gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-06
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+TS SL + W PP G Y+V R + T GL+PG
Sbjct: 10 DVTSTSLTLSWSPPPGNGPITGYEVE--YRPVNGGEEWKEITVPGTTTSYTLTGLKPGTE 67
Query: 350 YQVLVKTVSGK 360
Y+V V+ V+G
Sbjct: 68 YEVRVQAVNGA 78
|
Length = 84 |
| >gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 2e-05
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA-GYS 148
P PP+NL V + + + W PP +G+ + + P + Y+
Sbjct: 1 PSPPSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYT 60
Query: 149 LKDLTPGGSYQVQLFSVYDSKES 171
L L PG Y+ ++ +V + E
Sbjct: 61 LTGLKPGTEYEFRVRAVNGAGEG 83
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83 |
| >gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-05
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPP-ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSL 149
PTNL+V + + + WSPP +G +G++++ ++ + I Y+L
Sbjct: 1 SAPTNLTVTDVTSTSLTLSWSPPPGNGPITGYEVEYRPVNGGEEWKEI-TVPGTTTSYTL 59
Query: 150 KDLTPGGSYQVQLFSVYD 167
L PG Y+V++ +V
Sbjct: 60 TGLKPGTEYEVRVQAVNG 77
|
Length = 84 |
| >gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 6e-05
Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
P+ P V T++ + W P T Y V + + G
Sbjct: 1 PSPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEVTPGSET--- 57
Query: 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTT 271
GL PG Y V+ V+ S P+
Sbjct: 58 SYTLTGLKPGTEYEFRVRAVNGGGESPPSE 87
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93 |
| >gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Score = 37.1 bits (86), Expect = 0.001
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 290 SITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGR 348
+TS S+ + W PP+ Y V + G + + T ++ GL+PG
Sbjct: 11 DVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKE-VEVTPGSETSYTLT-GLKPGT 68
Query: 349 TYQVLVKTVSGK 360
Y+ V+ V+G
Sbjct: 69 EYEFRVRAVNGG 80
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93 |
| >gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain | Back alignment and domain information |
|---|
Score = 36.8 bits (85), Expect = 0.002
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+TS S+ + WEPP Y V V S + + GL+PG
Sbjct: 11 DVTSTSVTLSWEPPPD-DGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYTLTGLKPGTE 69
Query: 350 YQVLVKTVSGK 360
Y+ V+ V+G
Sbjct: 70 YEFRVRAVNGA 80
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| KOG4221|consensus | 1381 | 100.0 | ||
| KOG4221|consensus | 1381 | 100.0 | ||
| KOG3513|consensus | 1051 | 99.97 | ||
| KOG3513|consensus | 1051 | 99.96 | ||
| KOG0196|consensus | 996 | 99.65 | ||
| KOG0196|consensus | 996 | 99.6 | ||
| KOG4222|consensus | 1281 | 99.59 | ||
| KOG4258|consensus | 1025 | 99.4 | ||
| KOG4222|consensus | 1281 | 99.39 | ||
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 99.32 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 99.18 | |
| KOG4258|consensus | 1025 | 99.13 | ||
| PF10179 | 300 | DUF2369: Uncharacterised conserved protein (DUF236 | 98.94 | |
| PF10179 | 300 | DUF2369: Uncharacterised conserved protein (DUF236 | 98.83 | |
| KOG4802|consensus | 516 | 98.77 | ||
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 98.62 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 98.49 | |
| KOG4802|consensus | 516 | 98.42 | ||
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 98.36 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 98.23 | |
| COG3401 | 343 | Fibronectin type 3 domain-containing protein [Gene | 98.17 | |
| KOG3632|consensus | 1335 | 98.11 | ||
| PF01108 | 107 | Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH | 97.77 | |
| PF09294 | 106 | Interfer-bind: Interferon-alpha/beta receptor, fib | 97.41 | |
| COG3401 | 343 | Fibronectin type 3 domain-containing protein [Gene | 97.38 | |
| KOG4806|consensus | 454 | 97.2 | ||
| KOG3632|consensus | 1335 | 97.13 | ||
| PF01108 | 107 | Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH | 97.04 | |
| KOG4806|consensus | 454 | 96.87 | ||
| PF09294 | 106 | Interfer-bind: Interferon-alpha/beta receptor, fib | 96.84 | |
| KOG1225|consensus | 525 | 96.57 | ||
| KOG4367|consensus | 699 | 96.41 | ||
| KOG4367|consensus | 699 | 96.33 | ||
| KOG1225|consensus | 525 | 96.1 | ||
| PF09240 | 99 | IL6Ra-bind: Interleukin-6 receptor alpha chain, bi | 95.93 | |
| PF09067 | 104 | EpoR_lig-bind: Erythropoietin receptor, ligand bin | 95.76 | |
| KOG4152|consensus | 830 | 95.4 | ||
| COG4733 | 952 | Phage-related protein, tail component [Function un | 94.99 | |
| KOG4152|consensus | 830 | 93.25 | ||
| KOG1948|consensus | 1165 | 92.78 | ||
| PLN02533 | 427 | probable purple acid phosphatase | 92.35 | |
| COG4733 | 952 | Phage-related protein, tail component [Function un | 91.66 | |
| PF07495 | 66 | Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi | 90.64 | |
| PF07495 | 66 | Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi | 90.34 | |
| PF09067 | 104 | EpoR_lig-bind: Erythropoietin receptor, ligand bin | 89.57 | |
| PF10342 | 93 | GPI-anchored: Ser-Thr-rich glycosyl-phosphatidyl-i | 87.26 | |
| PLN02533 | 427 | probable purple acid phosphatase | 83.99 | |
| KOG1948|consensus | 1165 | 83.3 | ||
| KOG0613|consensus | 1205 | 80.39 |
| >KOG4221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=247.58 Aligned_cols=340 Identities=20% Similarity=0.289 Sum_probs=261.8
Q ss_pred EeCCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeE
Q psy4956 5 VHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTA 84 (361)
Q Consensus 5 ~~~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~ 84 (361)
....+-..+.|..|....+++.-|.+.|.. ++... ++.+...+.....++.+|.|.+.|.|+|+|.+..|..-.+..+
T Consensus 438 ~~~srfi~~tw~~p~~~~g~i~~~~v~~~~-~~~~r-er~~~tss~g~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pL 515 (1381)
T KOG4221|consen 438 LVSSRFIQLTWRPPAQISGNISTYTVFYKV-EGDVR-ERLQNTSSPGIQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPL 515 (1381)
T ss_pred cccceeEEEeecCccccCCCcceEEEEEec-CCchh-hhheeccCCceEEEeeecccceeEEEEEeccCcccCCccCCce
Confidence 445566778899899888899999999977 33332 3434444323899999999999999999998877565555667
Q ss_pred EEecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 85 ~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
.+.+.+.+|..+.+...+..++.+.|.+|. ++++.+|++.|... .....+.+..+.. .++|.+|.+.++|.|+|
T Consensus 516 kV~t~pEgp~~~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~---~~~~~~~~~~n~~-e~ti~gL~k~TeY~~~v 591 (1381)
T KOG4221|consen 516 KVTTQPEGPVQLQAYATSPTTILVTWEPPPFGNGPITGYKLFYSED---DTGKELRVENNAT-EYTINGLEKYTEYSIRV 591 (1381)
T ss_pred EEecCCCCCccccccccCcceEEEEecCCCCCCCCceEEEEEEEcC---CCCceEEEecCcc-EEEeecCCCccceEEEE
Confidence 778888788778888888999999999987 77899999988765 2344556667777 99999999999999999
Q ss_pred EEEeCCCCcccceeeeeccC---CC-CCcceEEEeccCCeEEEEeecCCCC---CcceEEEEEEeCCCCCCc--eeEEee
Q psy4956 163 FSVYDSKESVAYTSRNFTTK---PN-TPGKFIVWFRNETTLLVLWQPSYPA---SIYTHYKVSIDPPDAPES--VLYVEK 233 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~---p~-~p~~l~~~~~~~~~~~v~W~~~~~~---~~~~~y~v~~~~~~~~~~--~~~~~~ 233 (361)
.|.+..|.+..+....+.|. |+ ||.|+++...+.++|.|+|.+|... +.+.+|+|+|........ .....
T Consensus 592 vA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~- 670 (1381)
T KOG4221|consen 592 VAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVK- 670 (1381)
T ss_pred EEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecc-
Confidence 99999888876555555544 65 4556999999999999999876443 889999999986543322 12222
Q ss_pred ccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEE-EEecC--------CCCCccceEEeeecCCceEEEEeeCCC
Q psy4956 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTA-QYRTI--------PLRPLSFTYDKASITSNSLRVVWEPPK 304 (361)
Q Consensus 234 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~-~~~t~--------~~~p~~l~~~~~~~~~~si~l~W~~~~ 304 (361)
+...++.+.+|+|++.|.|+|.|.+..|.++++.. .+.|. |.+|..|.+ ....++|.++|++|.
T Consensus 671 ----~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~d~~e~vp~~ps~l~~---~~g~~si~vsW~Pp~ 743 (1381)
T KOG4221|consen 671 ----GNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPESDLDERVPGKPSELHV---HPGSNSIVVSWTPPP 743 (1381)
T ss_pred ----cchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCccccccccCCCCCceeee---ccCceeEEEEeCCCC
Confidence 23578999999999999999999999988877653 44442 234454444 667789999999975
Q ss_pred CC-CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 305 GF-SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 305 ~~-~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.. ..+.+|+|.|+...+. .....++++.....|.+.. |.|+..|.|+++|.+..
T Consensus 744 ~~~~~vrgY~ig~r~g~~~-p~~~tIrl~~~~s~y~l~~-Le~~~~YvVkL~AfNn~ 798 (1381)
T KOG4221|consen 744 HPNIVVRGYKIGYRPGSGI-PDTGTIRLDEKVSYYNLEQ-LEPNRDYVVKLRAFNNH 798 (1381)
T ss_pred ChhhhhcceEEeeecccCC-CCCccEEecceeeEEEEEe-cccCceEEEEEEEeccC
Confidence 42 4688999999866542 2344467788888999997 99999999999997643
|
|
| >KOG4221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=237.13 Aligned_cols=336 Identities=18% Similarity=0.265 Sum_probs=247.3
Q ss_pred ceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEec-
Q psy4956 10 GANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITT- 88 (361)
Q Consensus 10 ~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t- 88 (361)
...+.|+.|.-.+++|.+|++.|...+ ...+..+..+ ..+++|.+|++.|+|.|+|.|.|..|.+..+..+.+.|
T Consensus 536 ti~v~WepP~~~n~~I~~yk~~ys~~~--~~~~~~~~~n--~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tl 611 (1381)
T KOG4221|consen 536 TILVTWEPPPFGNGPITGYKLFYSEDD--TGKELRVENN--ATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTL 611 (1381)
T ss_pred eEEEEecCCCCCCCCceEEEEEEEcCC--CCceEEEecC--ccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEec
Confidence 345667778888999999999999862 2225555555 89999999999999999999999876665555566555
Q ss_pred --CCCCC-CccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 89 --PPDPP-TNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 89 --~~~~p-~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
.|++| .|+++...++++|.|+|.+|. ++.+.+|+|+|+....+...++..+..+.. .+.+.+|+|++.|.|+
T Consensus 612 sd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~~-~~l~~~Lep~T~Y~vr 690 (1381)
T KOG4221|consen 612 SDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNTT-QYLFNGLEPNTQYRVR 690 (1381)
T ss_pred cCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccchh-hhHhhcCCCCceEEEE
Confidence 35555 569999999999999999987 677899999998766655666666665666 8999999999999999
Q ss_pred EEEEeCCCCcccceeeeeccC--------CCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEe
Q psy4956 162 LFSVYDSKESVAYTSRNFTTK--------PNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVE 232 (361)
Q Consensus 162 v~a~~~~~~s~~~~~~~~~t~--------p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~ 232 (361)
|.|.+..|.+..+.-..+.|. |.+|..|.+. ...+++.+.|+|+... ..+.+|+|-|+...+......+.
T Consensus 691 Isa~t~nGtGpaS~w~~aeT~~~d~~e~vp~~ps~l~~~-~g~~si~vsW~Pp~~~~~~vrgY~ig~r~g~~~p~~~tIr 769 (1381)
T KOG4221|consen 691 ISAMTVNGTGPASEWVSAETPESDLDERVPGKPSELHVH-PGSNSIVVSWTPPPHPNIVVRGYKIGYRPGSGIPDTGTIR 769 (1381)
T ss_pred EEEeccCCCCCcccceeccCccccccccCCCCCceeeec-cCceeEEEEeCCCCChhhhhcceEEeeecccCCCCCccEE
Confidence 999999888876555555543 3455555553 4567999999988544 66789999997654433211111
Q ss_pred eccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecC------------CCCCccceEEeeecCCceEEEEe
Q psy4956 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTI------------PLRPLSFTYDKASITSNSLRVVW 300 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~------------~~~p~~l~~~~~~~~~~si~l~W 300 (361)
. ......+.|..|.++..|.|++.|+|..|.+.+..-...+. ..+|..+++ ...+.++|++.|
T Consensus 770 l---~~~~s~y~l~~Le~~~~YvVkL~AfNn~gdG~p~y~~~~tR~~~~~~~~v~tp~~ppvgv~A--~~~S~tsI~v~w 844 (1381)
T KOG4221|consen 770 L---DEKVSYYNLEQLEPNRDYVVKLRAFNNHGDGNPIYESVKTRSATDPTSPVDTPMLPPVGVRA--NALSSTSIRVTW 844 (1381)
T ss_pred e---cceeeEEEEEecccCceEEEEEEEeccCCCCcceeeeeeeccCCCcCCcCCCCCCCcccccc--cccccceEEEEE
Confidence 1 22347899999999999999999999999887766444333 123455666 778889999999
Q ss_pred eCC-CCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 301 EPP-KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 301 ~~~-~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
..- +.......|.+.|...+-.. ............++.+.+ |+|.+.|+|.|.++.
T Consensus 845 ~~~~~~t~~~~~yTVr~~~~gi~~-~~~~~~~~~t~ls~~v~g-lkpnt~yEfav~~~~ 901 (1381)
T KOG4221|consen 845 ADNKDQTTDNRIYTVRWSLTGIRN-GTLYRYDNSTDLSYLVGG-LKPNTPYEFAVMVVK 901 (1381)
T ss_pred ecCCCccccceEEEEEEeeccccc-ceeEEEecccccceeccC-cCcCChhhhhhhhhh
Confidence 983 22235678999997432110 111122345556888875 999999999998775
|
|
| >KOG3513|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-27 Score=214.01 Aligned_cols=299 Identities=16% Similarity=0.232 Sum_probs=226.5
Q ss_pred eEEec--CCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEEC
Q psy4956 53 NIEFS--EGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISL 128 (361)
Q Consensus 53 ~~~i~--~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~ 128 (361)
.++|. .|+....|.+.+++..+ ..+..+.+.+..+|.||.++.+..++.+++.|+|++.. +.++..|.|+++..
T Consensus 578 ~L~i~nv~l~~~G~Y~C~aqT~~D--s~s~~A~l~V~gpPgpP~~v~~~~i~~t~~~lsW~~g~dn~SpI~~Y~iq~rt~ 655 (1051)
T KOG3513|consen 578 RLTIANVSLEDSGKYTCVAQTALD--SASARADLLVRGPPGPPPDVHVDDISDTTARLSWSPGSDNNSPIEKYTIQFRTP 655 (1051)
T ss_pred ceEEEeeccccCceEEEEEEEeec--chhcccceEEecCCCCCCceeEeeeccceEEEEeecCCCCCCCceEEeEEecCC
Confidence 34444 47888899999998443 23445568888999999999999999999999999977 46799999999887
Q ss_pred CCCCCCeEEeecCCCC--ceEEEcCCCCCcEEEEEEEEEeCCCCccccee-eeeccCCC----CCcceEEEeccCCeEEE
Q psy4956 129 SEKTPPRIIGFTENPP--AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS-RNFTTKPN----TPGKFIVWFRNETTLLV 201 (361)
Q Consensus 129 ~~~~~~~~~~~~~~~~--~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~-~~~~t~p~----~p~~l~~~~~~~~~~~v 201 (361)
-...|.....++...+ .+..+.+|.|+..|+|||.|.|..|.+.++.. ...+|.+. .|.++.......+.+.|
T Consensus 656 ~~~~W~~v~~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvI 735 (1051)
T KOG3513|consen 656 FPGKWKAVTTVPGNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVI 735 (1051)
T ss_pred CCCcceEeeECCCcccCccceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCCCCCccCCccccccCCCCceEEE
Confidence 5556665555554433 24778899999999999999999988876653 34456543 46788888888889999
Q ss_pred EeecCCC---CCcceEEEEEEeCCCCC-CceeEEeeccCCCCCcEEEecC--CCCCCeEEEEEEEEeCCCCCCceE-EEE
Q psy4956 202 LWQPSYP---ASIYTHYKVSIDPPDAP-ESVLYVEKEGEPPGPAQAAFKG--LVPGRAYNISVQTVSEDEISTPTT-AQY 274 (361)
Q Consensus 202 ~W~~~~~---~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--L~p~t~Y~v~V~a~~~~~~s~~~~-~~~ 274 (361)
+|+|-.. .|..-+|+|.|++.+.. .+....-. ..+...+.+.+ ..|.+.|.+.|+|+|..|.++... +.+
T Consensus 736 tW~Pl~~~~qNG~gfgY~Vswr~~g~~~~W~~~~v~---~~d~~~~V~~~~st~~~tpyevKVqa~N~~GeGp~s~~~v~ 812 (1051)
T KOG3513|consen 736 TWEPLPEEEQNGPGFGYRVSWRPQGADKEWKEVIVS---NQDQPRYVVSNESTEPFTPYEVKVQAINDQGEGPESQVTVG 812 (1051)
T ss_pred EeccCCHHHccCCCceEEEEEEeCCCCcccceeEec---ccCCceEEEcCCCCCCcceeEEEEEEecCCCCCCCCceEEE
Confidence 9987532 27778999999998876 54433222 22235566654 667999999999999988885443 344
Q ss_pred ecC----CCCCccceEEeeecCCceEEEEeeCCC-CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCce
Q psy4956 275 RTI----PLRPLSFTYDKASITSNSLRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349 (361)
Q Consensus 275 ~t~----~~~p~~l~~~~~~~~~~si~l~W~~~~-~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~ 349 (361)
.+. +.+|..+.+ ...+.+.+.|+|+++. ..+.+++|+|+|...+..+.........+..++..|++ |+|.|.
T Consensus 813 ~S~Ed~P~~ap~~~~~--~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~~~~~~i~~~~~~~~ltg-L~~~T~ 889 (1051)
T KOG3513|consen 813 YSGEDEPPVAPTKLSA--KPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGSLSRVQIAGNRTSWRLTG-LEPNTK 889 (1051)
T ss_pred EcCCCCCCCCCcccee--ecccCceEEEEecCcCccCCccceeEEEEEEcCCCcccccceeecCCcceEeeeC-CCCCce
Confidence 443 335677888 8899999999998752 11489999999999887644444455668889999996 999999
Q ss_pred EEEEEEEEeC
Q psy4956 350 YQVLVKTVSG 359 (361)
Q Consensus 350 Y~v~V~a~~~ 359 (361)
|.|.|+|.+.
T Consensus 890 Y~~~vrA~ns 899 (1051)
T KOG3513|consen 890 YRFYVRAYTS 899 (1051)
T ss_pred EEEEEEEecC
Confidence 9999999874
|
|
| >KOG3513|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-26 Score=206.66 Aligned_cols=346 Identities=16% Similarity=0.154 Sum_probs=240.1
Q ss_pred eCCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCC-eEEeecC-ccceEEecCCCCCceEEEEEEEecCCcCccc-ee
Q psy4956 6 HGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPN-TTYVSRD-IKDNIEFSEGLPGTKYDFYLYYTNSTVHDWL-TW 82 (361)
Q Consensus 6 ~~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~-~~~~~~~-~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~-~~ 82 (361)
.....+.|+|+....+.++|..|.|+.+..-...+.. .+++... +..+.++.+|.|+..|+|+|+|.|..|.+.. ..
T Consensus 626 i~~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~p 705 (1051)
T KOG3513|consen 626 ISDTTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVTTVPGNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEPSPP 705 (1051)
T ss_pred eccceEEEEeecCCCCCCCceEEeEEecCCCCCcceEeeECCCcccCccceeEEccCCCcceEEEEEEEcccccCCCCCC
Confidence 4567788999998888889999999998864333222 2333331 1136889999999999999999996544322 22
Q ss_pred eEEEecCCCC----CCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCC-CCCeEEeecCCCCceEEEc--C
Q psy4956 83 TASITTPPDP----PTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEK-TPPRIIGFTENPPAGYSLK--D 151 (361)
Q Consensus 83 ~~~~~t~~~~----p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~l~--~ 151 (361)
+...+|.+.+ |.++.......+.+.++|+|.. +|+-.+|+|.|++.+.. .|........... .+.+. .
T Consensus 706 S~~~rT~ea~P~~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~~W~~~~v~~~d~~-~~V~~~~s 784 (1051)
T KOG3513|consen 706 SEKVRTPEAAPSVNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADKEWKEVIVSNQDQP-RYVVSNES 784 (1051)
T ss_pred ccceecCCCCCccCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCcccceeEecccCCc-eEEEcCCC
Confidence 5666776555 5778777777899999999966 78888999999998776 4554444433333 55554 4
Q ss_pred CCCCcEEEEEEEEEeCCCCcccceeeeeccC----CCCCcceEEEeccCCeEEEEeecCC-CCCcceEEEEEEeCCCCCC
Q psy4956 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTK----PNTPGKFIVWFRNETTLLVLWQPSY-PASIYTHYKVSIDPPDAPE 226 (361)
Q Consensus 152 L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~----p~~p~~l~~~~~~~~~~~v~W~~~~-~~~~~~~y~v~~~~~~~~~ 226 (361)
..|++.|.+.|+++|+.|.+..+....+... +.+|..+.+...+.+.+.|+|+++. ..|.+.+|.|.|+..+...
T Consensus 785 t~~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~ 864 (1051)
T KOG3513|consen 785 TEPFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKE 864 (1051)
T ss_pred CCCcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCc
Confidence 6789999999999999998865444444333 5678889999999999999997763 3489999999999877653
Q ss_pred ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE-EEEecCCCCCcc-------ceEEeeecCCceEEE
Q psy4956 227 SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT-AQYRTIPLRPLS-------FTYDKASITSNSLRV 298 (361)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~-~~~~t~~~~p~~-------l~~~~~~~~~~si~l 298 (361)
...... ...++.++..|.||++.+.|.|.|+|.+..|.++++. ....+++.+|.. ..+ .......+.|
T Consensus 865 ~~~~~~--~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~pPs~~~~~p~g~~~--~~~~~~~~~l 940 (1051)
T KOG3513|consen 865 GSLSRV--QIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAPPSQVDIAPPGNFI--WKFSASILLL 940 (1051)
T ss_pred ccccce--eecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCCCcccccCCCcceE--EeeeeeEEEE
Confidence 221111 1135678999999999999999999999988765543 445666655543 223 3556678899
Q ss_pred EeeCC---CCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 299 VWEPP---KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 299 ~W~~~---~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.|..- ..-+.+.+|.|.++....... .+.........+-+...+ +-.|.+.|++.+.+
T Consensus 941 ~w~~v~~~~nes~v~gYkV~~~~~~~~~~--~~~~t~~~~~~~~~p~~~--~~~y~i~v~~~~~g 1001 (1051)
T KOG3513|consen 941 LWLLVSAFENESEVGGYKVLYREDLQNDI--EIILTMKLDAEFPEPSDL--DGKYDIKVRGYSPG 1001 (1051)
T ss_pred EEeeEEEEeecccCcceEEEEeecccCCc--eeEecccccccccCcccc--CCcceeEeccccCC
Confidence 99873 112468999999998754222 111111111122222224 25899999877653
|
|
| >KOG0196|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-14 Score=127.47 Aligned_cols=181 Identities=20% Similarity=0.321 Sum_probs=127.4
Q ss_pred eEEEecCCCCCCccEEEEEeCCEEEEEeeCCCC-C--CcccEEEEEEECCCCC------CCeEEeecCCCC---ceEEEc
Q psy4956 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPIS-G--KYSGFKLKVISLSEKT------PPRIIGFTENPP---AGYSLK 150 (361)
Q Consensus 83 ~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~-~--~~~~y~v~~~~~~~~~------~~~~~~~~~~~~---~~~~l~ 150 (361)
..-.+.+|++|.++... ++.+++.|+|.+|.+ | .-..|.+.++...... .......+.+.. .++.+.
T Consensus 325 ~mpCT~PPSaP~nlis~-vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~ 403 (996)
T KOG0196|consen 325 SMPCTRPPSAPRNLISN-VNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVS 403 (996)
T ss_pred CCCCCCCCCccceeeee-cccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEe
Confidence 34456678889998766 789999999999872 2 2335777776543221 011111121111 489999
Q ss_pred CCCCCcEEEEEEEEEeCCCCc----ccceeeeeccC---CCCCcceEEEeccCCeEEEEeecC-CCCCcceEEEEEEeCC
Q psy4956 151 DLTPGGSYQVQLFSVYDSKES----VAYTSRNFTTK---PNTPGKFIVWFRNETTLLVLWQPS-YPASIYTHYKVSIDPP 222 (361)
Q Consensus 151 ~L~p~~~Y~v~v~a~~~~~~s----~~~~~~~~~t~---p~~p~~l~~~~~~~~~~~v~W~~~-~~~~~~~~y~v~~~~~ 222 (361)
+|.|.+.|+|.|.|.|+...- .......++|. |++...++....+.+++.|+|..| .+.+.+..|.|.|.++
T Consensus 404 ~L~ah~~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek 483 (996)
T KOG0196|consen 404 DLLAHTNYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEK 483 (996)
T ss_pred ccccccccEEEEEEeecccccCCCCCcceeEEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeec
Confidence 999999999999999965221 22344555554 666677888899999999999655 4458899999999988
Q ss_pred CCCCce-eEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCc
Q psy4956 223 DAPESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP 269 (361)
Q Consensus 223 ~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~ 269 (361)
+..... ...... .+..++.+|+|++.|.|+|+|.+..|.+.-
T Consensus 484 ~~~e~~~~~~~t~-----~~~~ti~gL~p~t~YvfqVRarT~aG~G~~ 526 (996)
T KOG0196|consen 484 DEDERSYSTLKTK-----TTTATITGLKPGTVYVFQVRARTAAGYGPY 526 (996)
T ss_pred cccccceeEEecc-----cceEEeeccCCCcEEEEEEEEecccCCCCC
Confidence 653332 222222 478999999999999999999998887643
|
|
| >KOG0196|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.1e-13 Score=121.49 Aligned_cols=174 Identities=19% Similarity=0.266 Sum_probs=121.3
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCCCC-cc-eEEEEEEeCCCCC-------CceeEEeeccCCCCCcEEEecCCCC
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPAS-IY-THYKVSIDPPDAP-------ESVLYVEKEGEPPGPAQAAFKGLVP 250 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~-~~-~~y~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~L~p 250 (361)
+..|++|.+|... ++.+++.|.|.+|...| .- ..|.|.+..-... .....+......-.++.+.+.+|.|
T Consensus 329 T~PPSaP~nlis~-vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~a 407 (996)
T KOG0196|consen 329 TRPPSAPRNLISN-VNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVSDLLA 407 (996)
T ss_pred CCCCCccceeeee-cccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEecccc
Confidence 3447788888776 88999999999886553 22 2677776643321 1122222222234557899999999
Q ss_pred CCeEEEEEEEEeCCCC-C----CceEEEEecCCCCC---ccceEEeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCC
Q psy4956 251 GRAYNISVQTVSEDEI-S----TPTTAQYRTIPLRP---LSFTYDKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRP 321 (361)
Q Consensus 251 ~t~Y~v~V~a~~~~~~-s----~~~~~~~~t~~~~p---~~l~~~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~ 321 (361)
.+.|+|.|.|+|+... + ..+.+...|....| ..++. ...+.+++.|+|..|+. .+.+..|+|+|.+...
T Consensus 408 h~~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps~V~~~r~--~~~~~~sitlsW~~p~~png~ildYEvky~ek~~ 485 (996)
T KOG0196|consen 408 HTNYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPSPVSVLRQ--VSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDE 485 (996)
T ss_pred ccccEEEEEEeecccccCCCCCcceeEEeeccccCCCccceEEE--eeeccCceEEecCCCCCCCCcceeEEEEEeeccc
Confidence 9999999999997432 1 22345666655554 34566 78889999999988642 2378999999998864
Q ss_pred CCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 322 GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.+..... .....+..++.+ |+|++.|-|+|+|+..
T Consensus 486 ~e~~~~~--~~t~~~~~ti~g-L~p~t~YvfqVRarT~ 520 (996)
T KOG0196|consen 486 DERSYST--LKTKTTTATITG-LKPGTVYVFQVRARTA 520 (996)
T ss_pred cccceeE--EecccceEEeec-cCCCcEEEEEEEEecc
Confidence 3333333 345566899986 9999999999999864
|
|
| >KOG4222|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=127.40 Aligned_cols=303 Identities=17% Similarity=0.236 Sum_probs=189.8
Q ss_pred ceEEecCCCCCceEEEEEEEecCCcCccceeeEEE---------------ecCCCCCCccEEEEEeCCEEEEEeeCCCC-
Q psy4956 52 DNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI---------------TTPPDPPTNLSVNVRSGKTAQIFWSPPIS- 115 (361)
Q Consensus 52 ~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~---------------~t~~~~p~~l~~~~~~~~~v~l~W~~p~~- 115 (361)
.+..+.+|+-...|.....+....+....+.++.. ...|.+|..-.+..++.+++.|+|.+...
T Consensus 474 ~~l~i~dl~~~DtG~YTc~as~~~ges~wSatl~v~~~~~s~q~~r~~D~S~~pS~p~~p~v~~v~~~~v~LsW~~~s~s 553 (1281)
T KOG4222|consen 474 GSLRIRDLKGPDTGRYTCIASDESGESTWSATLTVEKAGSSQQFCRCEDPSALPSPPGTPGVVNVSRTSVTLSWQPTSPS 553 (1281)
T ss_pred ceeeeeeeecCCCcceeeeccCcccccccceeeEhhhcCcccccccCCChhhCCCCCCCCccccCCCceEEecccCCCCC
Confidence 45666777666666666666544433322222221 11245566667777889999999988663
Q ss_pred --CCcccEEEEEEECCC-CCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeee-eccCCCCC-----
Q psy4956 116 --GKYSGFKLKVISLSE-KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN-FTTKPNTP----- 186 (361)
Q Consensus 116 --~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~-~~t~p~~p----- 186 (361)
.++.+|.+++...+- +.|...... ...+ .+.|.+|+|+..|.|.+++.+..|.+.+..... .++.|..+
T Consensus 554 g~vP~s~yiieafs~~~~etw~~ta~~-v~~t-~~~I~gL~P~~sylf~vRa~n~~Gis~Ps~~S~~vrta~a~~~~a~a 631 (1281)
T KOG4222|consen 554 GAVPASGYIIEAFSPDLGETWQTTAGR-VKTT-TYAIRGLKPNLSYLFLVRAENEQGISDPSTSSDPVRTAPADAAAAGA 631 (1281)
T ss_pred CccccchhHHHHhhhhhcccccccccc-cccc-eeeecCcCccceeeeeeeccccccccCCcccCCccccCCCChhhhhh
Confidence 357789998765432 233332222 2223 799999999999999999999988776544332 23332111
Q ss_pred -----------cce---EEEeccCCeEEEEeecCCC--CCcceEEEEEEeCCCCCC-ceeEEeeccCCCCCcEEEecCCC
Q psy4956 187 -----------GKF---IVWFRNETTLLVLWQPSYP--ASIYTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLV 249 (361)
Q Consensus 187 -----------~~l---~~~~~~~~~~~v~W~~~~~--~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~ 249 (361)
..+ .....+.+++.+.|..... ...+.+|+|.|+...... ....... ......++.+.+|.
T Consensus 632 d~~k~~~~ls~~l~~l~~~~~L~asslr~~w~~~kq~~~~~i~g~~I~~r~~~~~~a~~s~~~v--~~~t~~s~v~~nl~ 709 (1281)
T KOG4222|consen 632 DHQKVQRELSNELLRLSNPNVLNASSLRLGWTKDKQHGSQYIQGYRISYRSLGSQLAQWSNAGV--TVPTPESVVVPNLK 709 (1281)
T ss_pred hHHHHHHhhcccceeeccccccchhheeeeeeeecccCcccccceEEEeccCccccccccccce--eccCCcceeccccC
Confidence 011 1223566789999976543 478899999999876521 1111111 13345788999999
Q ss_pred CCCeEEEEEEEEeCCCCC---Cc-eEEEEecC---CC-CCccceE-EeeecCCceEEEEeeCCCC---CCCceeEEEEEE
Q psy4956 250 PGRAYNISVQTVSEDEIS---TP-TTAQYRTI---PL-RPLSFTY-DKASITSNSLRVVWEPPKG---FSEFDKYQVSIN 317 (361)
Q Consensus 250 p~t~Y~v~V~a~~~~~~s---~~-~~~~~~t~---~~-~p~~l~~-~~~~~~~~si~l~W~~~~~---~~~~~~y~i~~~ 317 (361)
|++.|.|.+..+...+.+ .+ ....+.|. |. +|..++. ++.....+++.|+|.++.. .+.+.+|.|.+.
T Consensus 710 p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta~~Vsw~~pp~d~~ng~~qg~ki~~~ 789 (1281)
T KOG4222|consen 710 PGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTAGSVSWAPPPADVQNGILQGYKIECS 789 (1281)
T ss_pred CCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCceeeEEecCCcccccCCcccceeEEee
Confidence 999999999998874432 22 22233332 32 3455432 1145566789999999632 147889999877
Q ss_pred ECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.........+ ...+....+.++.+ |.+|..|.|+|.|.++.
T Consensus 790 ~~e~tr~h~n-~t~~a~~~sv~i~~-l~~g~ay~vtv~a~T~a 830 (1281)
T KOG4222|consen 790 GGEKTRIHIN-KTTNARTGSVTIGN-LVTGIAYSVTVAARTGA 830 (1281)
T ss_pred cCcccccccc-ccccCCCCceEecc-ccccceEEEEEeeecCC
Confidence 5542111122 22335667888875 99999999999998864
|
|
| >KOG4258|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-11 Score=110.92 Aligned_cols=261 Identities=21% Similarity=0.296 Sum_probs=160.8
Q ss_pred ccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECC--------C-----CCCCeEEeecCC------CC-ceEEEcC
Q psy4956 95 NLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLS--------E-----KTPPRIIGFTEN------PP-AGYSLKD 151 (361)
Q Consensus 95 ~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~--------~-----~~~~~~~~~~~~------~~-~~~~l~~ 151 (361)
++.....+.+++.|+|..-. ...+.+|.+.|+..- + ..++....+... .. -.+.+.+
T Consensus 493 ~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~~ 572 (1025)
T KOG4258|consen 493 QFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLDG 572 (1025)
T ss_pred eeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehhc
Confidence 34444556789999996532 234779999887521 0 012222333222 11 2578899
Q ss_pred CCCCcEEEEEEEEEeCCC--Cc--ccceeeeeccC---CCCCcceEEEeccCCeEEEEeecCC-CCCcceEEEEEEeCCC
Q psy4956 152 LTPGGSYQVQLFSVYDSK--ES--VAYTSRNFTTK---PNTPGKFIVWFRNETTLLVLWQPSY-PASIYTHYKVSIDPPD 223 (361)
Q Consensus 152 L~p~~~Y~v~v~a~~~~~--~s--~~~~~~~~~t~---p~~p~~l~~~~~~~~~~~v~W~~~~-~~~~~~~y~v~~~~~~ 223 (361)
|+|+|.|.+.|++...-. .. ..+...-++|. |.+|..+-.....++.+.|.|+||. +.|.++.|.|.|+...
T Consensus 573 LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~snsSsqi~l~W~pP~~pNG~lt~Ylv~wer~~ 652 (1025)
T KOG4258|consen 573 LKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSNSSSQILLKWKPPSQPNGNLTHYLVVWERQA 652 (1025)
T ss_pred CCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccCcchheeEEecCCCCCCCceeEEEEEEEecc
Confidence 999999999999985221 11 11223334444 6677666666566668999999874 4599999999986421
Q ss_pred CCC------------------------c---------------------------------------------eeEEe--
Q psy4956 224 APE------------------------S---------------------------------------------VLYVE-- 232 (361)
Q Consensus 224 ~~~------------------------~---------------------------------------------~~~~~-- 232 (361)
... . ...++
T Consensus 653 ~~~yl~~~nYC~~~~k~p~~~~~p~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~e~eea~~~~~FEd~L~n~i~vpr~ 732 (1025)
T KOG4258|consen 653 EDGYLEQRNYCHKGLKLPIRADLPSFDSEDMDPLLEMEGHTGPCCSCPPTESYPQYEDEEASEQKTFEDFLHNAIFVPRR 732 (1025)
T ss_pred CCchHHHhccccccccccccccCCCCchhhcchhhhhccCCCCCCCCCcccccCchhhHHHHHHHHHhhhccceeeeccc
Confidence 000 0 00000
Q ss_pred -------------------e-----------------c----cC-CCCCcEEEecCCCCCCeEEEEEEEEeCCCC----C
Q psy4956 233 -------------------K-----------------E----GE-PPGPAQAAFKGLVPGRAYNISVQTVSEDEI----S 267 (361)
Q Consensus 233 -------------------~-----------------~----~~-~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~----s 267 (361)
. . .. ..+...+.+++|+..+.|.+.++|++.... |
T Consensus 733 ~~~krk~l~~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~~~~vi~~Lrh~tlY~i~l~aCnh~~~~~~cS 812 (1025)
T KOG4258|consen 733 PDRKRKSLDDVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNKESYVISGLRHFTLYRIDLQACNHATPKCGCS 812 (1025)
T ss_pred CcccccccccccceeeccccccccCCCCCCCCCCccccccCcccccccchhhhhhccccchhhhhhHhhhcccccccccc
Confidence 0 0 00 012235678899999999999999996554 6
Q ss_pred CceEEEEecCCCC-----CccceEEeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeecC-CCCceeEe
Q psy4956 268 TPTTAQYRTIPLR-----PLSFTYDKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSR-DEPTQCDM 340 (361)
Q Consensus 268 ~~~~~~~~t~~~~-----p~~l~~~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~~-~~~~~~~~ 340 (361)
..+.+.++|+|.. |..+.-+ -....+++.|+|.+|+. .+-+..|+|.|+...+......+.+.. .....+.+
T Consensus 813 ~a~~v~~RT~~~~~aD~i~g~v~we-~~~~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cvsR~~~~k~~gv~l 891 (1025)
T KOG4258|consen 813 HAAFVFARTMPTMGADDIPGPVTWE-CHIEMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECVSRMDYAKAGGVYL 891 (1025)
T ss_pred hhhhhhhccccccccccCCCceeEe-cccCcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhhhhhhhhhcCceEE
Confidence 6666777776632 3333331 13477899999998743 248999999999776533222222211 22235777
Q ss_pred ccCCCCCceEEEEEEEEe
Q psy4956 341 SEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 341 ~~~L~p~t~Y~v~V~a~~ 358 (361)
.+ |.|| .|.++|+|.|
T Consensus 892 ~~-l~~G-~y~~~vratS 907 (1025)
T KOG4258|consen 892 KR-LNPG-NYSVRVRATS 907 (1025)
T ss_pred Ee-cCCC-cEEEEEEEEe
Confidence 75 9998 9999999976
|
|
| >KOG4222|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.2e-12 Score=115.03 Aligned_cols=257 Identities=16% Similarity=0.178 Sum_probs=161.1
Q ss_pred eCCCceEEEEec--CCC-CCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCcccee
Q psy4956 6 HGVHGANLVIKI--PEN-LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTW 82 (361)
Q Consensus 6 ~~~~~~~l~~~~--p~~-~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~ 82 (361)
..+.+..+...| +.. ...++.+|.+++-..+-... .......-..+.+.|.+|+|++.|.|.|++.+..| -+.+.
T Consensus 536 ~~v~~~~v~LsW~~~s~sg~vP~s~yiieafs~~~~et-w~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~G-is~Ps 613 (1281)
T KOG4222|consen 536 VNVSRTSVTLSWQPTSPSGAVPASGYIIEAFSPDLGET-WQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQG-ISDPS 613 (1281)
T ss_pred ccCCCceEEecccCCCCCCccccchhHHHHhhhhhccc-ccccccccccceeeecCcCccceeeeeeecccccc-ccCCc
Confidence 344445544444 444 34499999998866442222 22222222268999999999999999999988653 32222
Q ss_pred --eEEEecCCCCC----------------CccE---EEEEeCCEEEEEeeCCCC---CCcccEEEEEEECCCC-CCCeEE
Q psy4956 83 --TASITTPPDPP----------------TNLS---VNVRSGKTAQIFWSPPIS---GKYSGFKLKVISLSEK-TPPRII 137 (361)
Q Consensus 83 --~~~~~t~~~~p----------------~~l~---~~~~~~~~v~l~W~~p~~---~~~~~y~v~~~~~~~~-~~~~~~ 137 (361)
+..+++.+..+ .-++ ...+..+++.+.|..+.. .-+.+|+|.|+..... ......
T Consensus 614 ~~S~~vrta~a~~~~a~ad~~k~~~~ls~~l~~l~~~~~L~asslr~~w~~~kq~~~~~i~g~~I~~r~~~~~~a~~s~~ 693 (1281)
T KOG4222|consen 614 TSSDPVRTAPADAAAAGADHQKVQRELSNELLRLSNPNVLNASSLRLGWTKDKQHGSQYIQGYRISYRSLGSQLAQWSNA 693 (1281)
T ss_pred ccCCccccCCCChhhhhhhHHHHHHhhcccceeeccccccchhheeeeeeeecccCcccccceEEEeccCcccccccccc
Confidence 23333332211 1111 122457899999988662 3478999999987652 222222
Q ss_pred -eecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCc---ccceeeeeccC---CC-CCcce---EEEeccCCeEEEEeecC
Q psy4956 138 -GFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES---VAYTSRNFTTK---PN-TPGKF---IVWFRNETTLLVLWQPS 206 (361)
Q Consensus 138 -~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s---~~~~~~~~~t~---p~-~p~~l---~~~~~~~~~~~v~W~~~ 206 (361)
....... ++.+.+|+|++.|++.++.+...+.+ .++....+.+. |. +|.++ .....+.+++.|+|.++
T Consensus 694 ~v~~~t~~-s~v~~nl~p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta~~Vsw~~p 772 (1281)
T KOG4222|consen 694 GVTVPTPE-SVVVPNLKPGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTAGSVSWAPP 772 (1281)
T ss_pred ceeccCCc-ceeccccCCCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCceeeEEecCC
Confidence 2223344 89999999999999999998764433 23233333222 33 34554 44455678999999877
Q ss_pred CCC---CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCC
Q psy4956 207 YPA---SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST 268 (361)
Q Consensus 207 ~~~---~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~ 268 (361)
..+ +.+.+|.|.+....... ............+.++.+|.++..|.|+|.+.++.|.+.
T Consensus 773 p~d~~ng~~qg~ki~~~~~e~tr---~h~n~t~~a~~~sv~i~~l~~g~ay~vtv~a~T~aGvG~ 834 (1281)
T KOG4222|consen 773 PADVQNGILQGYKIECSGGEKTR---IHINKTTNARTGSVTIGNLVTGIAYSVTVAARTGAGVGV 834 (1281)
T ss_pred cccccCCcccceeEEeecCcccc---ccccccccCCCCceEeccccccceEEEEEeeecCCccCC
Confidence 333 77889999776433211 111222234457899999999999999999999888663
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=82.68 Aligned_cols=82 Identities=24% Similarity=0.493 Sum_probs=70.3
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
++|.++.+...+.+++.|+|++|. .+.+.+|.|+|+............+..... .+.|.+|.|++.|.|+|+|.+..
T Consensus 1 s~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~v~a~~~~ 79 (85)
T PF00041_consen 1 SAPENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDWQEVTVPGNET-SYTITGLQPGTTYEFRVRAVNSD 79 (85)
T ss_dssp SSSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEEEEEEEETTSS-EEEEESCCTTSEEEEEEEEEETT
T ss_pred CcCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceeeeeeeeeeeee-eeeeccCCCCCEEEEEEEEEeCC
Confidence 468899999999999999999985 678999999999876655456666777777 99999999999999999999998
Q ss_pred CCccc
Q psy4956 169 KESVA 173 (361)
Q Consensus 169 ~~s~~ 173 (361)
|.+.+
T Consensus 80 g~g~~ 84 (85)
T PF00041_consen 80 GEGPP 84 (85)
T ss_dssp EEEEE
T ss_pred cCcCC
Confidence 87653
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.3e-10 Score=77.39 Aligned_cols=77 Identities=23% Similarity=0.460 Sum_probs=62.0
Q ss_pred CCccceEEeeecCCceEEEEeeCCC-CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 280 RPLSFTYDKASITSNSLRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 280 ~p~~l~~~~~~~~~~si~l~W~~~~-~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
+|.+|.+ ..++.+++.|+|+.+. +.+.+++|.|.|...+... .............+++.+ |+|++.|.|+|+|++
T Consensus 2 ~P~~l~v--~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~-L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 2 APENLSV--SNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS-DWQEVTVPGNETSYTITG-LQPGTTYEFRVRAVN 77 (85)
T ss_dssp SSEEEEE--EEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSS-EEEEEEEETTSSEEEEES-CCTTSEEEEEEEEEE
T ss_pred cCcCeEE--EECCCCEEEEEEECCCCCCCCeeEEEEEEEecccce-eeeeeeeeeeeeeeeecc-CCCCCEEEEEEEEEe
Confidence 6889999 8889999999999983 3358999999999886543 123344455566899986 999999999999998
Q ss_pred CC
Q psy4956 359 GK 360 (361)
Q Consensus 359 ~~ 360 (361)
++
T Consensus 78 ~~ 79 (85)
T PF00041_consen 78 SD 79 (85)
T ss_dssp TT
T ss_pred CC
Confidence 75
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >KOG4258|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-09 Score=96.96 Aligned_cols=255 Identities=17% Similarity=0.212 Sum_probs=151.1
Q ss_pred CceEEEEecCCCC---CCCcceEEEEEEcCC--------C-----CCCC-CeEEe------ecCccceEEecCCCCCceE
Q psy4956 9 HGANLVIKIPENL---SSDNSTYRLDYIPAH--------G-----HPPP-NTTYV------SRDIKDNIEFSEGLPGTKY 65 (361)
Q Consensus 9 ~~~~l~~~~p~~~---~~~~~~Y~v~~~~~~--------~-----~~~~-~~~~~------~~~~~~~~~i~~L~p~t~Y 65 (361)
..+.+.++|+.-. .-...||.+.|.... | ...+ ...+. ......-+.+.+|+|+|+|
T Consensus 500 ~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~~LkP~TqY 579 (1025)
T KOG4258|consen 500 SADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLDGLKPWTQY 579 (1025)
T ss_pred ecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehhcCCcccee
Confidence 3344555554422 226889999997642 1 1111 11111 1122346889999999999
Q ss_pred EEEEEEecCCc----CccceeeEEEec---CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCC---
Q psy4956 66 DFYLYYTNSTV----HDWLTWTASITT---PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTP--- 133 (361)
Q Consensus 66 ~i~V~a~~~~~----~~~~~~~~~~~t---~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~--- 133 (361)
.+.|++..... ....+...-+.| .|++|..+.....+++.+.|.|+||. +|.+++|.+.|......+.
T Consensus 580 AvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~snsSsqi~l~W~pP~~pNG~lt~Ylv~wer~~~~~yl~~ 659 (1025)
T KOG4258|consen 580 AVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSNSSSQILLKWKPPSQPNGNLTHYLVVWERQAEDGYLEQ 659 (1025)
T ss_pred EEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccCcchheeEEecCCCCCCCceeEEEEEEEeccCCchHHH
Confidence 99999863210 111122222334 46777666666666778999999988 7889999998864211000
Q ss_pred --------------------CeE--------------------------------------------Eeec---------
Q psy4956 134 --------------------PRI--------------------------------------------IGFT--------- 140 (361)
Q Consensus 134 --------------------~~~--------------------------------------------~~~~--------- 140 (361)
.+. ..++
T Consensus 660 ~nYC~~~~k~p~~~~~p~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~e~eea~~~~~FEd~L~n~i~vpr~~~~krk~ 739 (1025)
T KOG4258|consen 660 RNYCHKGLKLPIRADLPSFDSEDMDPLLEMEGHTGPCCSCPPTESYPQYEDEEASEQKTFEDFLHNAIFVPRRPDRKRKS 739 (1025)
T ss_pred hccccccccccccccCCCCchhhcchhhhhccCCCCCCCCCcccccCchhhHHHHHHHHHhhhccceeeecccCcccccc
Confidence 000 0000
Q ss_pred ---------------------------------------CCCCceEEEcCCCCCcEEEEEEEEEeCCCC----cccceee
Q psy4956 141 ---------------------------------------ENPPAGYSLKDLTPGGSYQVQLFSVYDSKE----SVAYTSR 177 (361)
Q Consensus 141 ---------------------------------------~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~----s~~~~~~ 177 (361)
.+. .++.+.+|.+.+.|.+.+.|++..+. |.. ...
T Consensus 740 l~~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~-~~~vi~~Lrh~tlY~i~l~aCnh~~~~~~cS~a-~~v 817 (1025)
T KOG4258|consen 740 LDDVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNK-ESYVISGLRHFTLYRIDLQACNHATPKCGCSHA-AFV 817 (1025)
T ss_pred cccccceeeccccccccCCCCCCCCCCccccccCcccccccc-hhhhhhccccchhhhhhHhhhcccccccccchh-hhh
Confidence 001 25677889999999999999986654 332 222
Q ss_pred eeccCC----C-CCcceEEEe-ccCCeEEEEeecC-CCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCC
Q psy4956 178 NFTTKP----N-TPGKFIVWF-RNETTLLVLWQPS-YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP 250 (361)
Q Consensus 178 ~~~t~p----~-~p~~l~~~~-~~~~~~~v~W~~~-~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p 250 (361)
..+|.| + -|.-+.-.. ...+.+.+.|..| .+.|.+..|.|.++..+.......+.... ......+.|.+|.|
T Consensus 818 ~~RT~~~~~aD~i~g~v~we~~~~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cvsR~~-~~k~~gv~l~~l~~ 896 (1025)
T KOG4258|consen 818 FARTMPTMGADDIPGPVTWECHIEMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECVSRMD-YAKAGGVYLKRLNP 896 (1025)
T ss_pred hhccccccccccCCCceeEecccCcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhhhhhh-hhhcCceEEEecCC
Confidence 223332 1 122222222 3677899999655 45599999999999765544332221111 11225678899999
Q ss_pred CCeEEEEEEEEeCCCCC
Q psy4956 251 GRAYNISVQTVSEDEIS 267 (361)
Q Consensus 251 ~t~Y~v~V~a~~~~~~s 267 (361)
| .|.++|+|.+-.|.+
T Consensus 897 G-~y~~~vratSlaGng 912 (1025)
T KOG4258|consen 897 G-NYSVRVRATSLAGNG 912 (1025)
T ss_pred C-cEEEEEEEEeeccCC
Confidence 9 899999998865554
|
|
| >PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.5e-06 Score=69.07 Aligned_cols=216 Identities=19% Similarity=0.184 Sum_probs=114.6
Q ss_pred ecCccceEEecCCCCCceEEEEEEEecCCcC-ccceeeEEEec---CCCCCCcc-----EEEEEeC-C-EEEEEeeCCC-
Q psy4956 47 SRDIKDNIEFSEGLPGTKYDFYLYYTNSTVH-DWLTWTASITT---PPDPPTNL-----SVNVRSG-K-TAQIFWSPPI- 114 (361)
Q Consensus 47 ~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~-~~~~~~~~~~t---~~~~p~~l-----~~~~~~~-~-~v~l~W~~p~- 114 (361)
..+..+.++|.+|.|+++|.|.|-+.+.... ++.-....+.+ ...+|..| ....+.. . .-..+++.|.
T Consensus 10 Cvg~~t~~t~~~L~p~t~YyfdVF~vn~~~n~ssay~gt~~~t~~~~r~~~~~Lkdg~l~~~~l~~~~g~~~f~f~vP~~ 89 (300)
T PF10179_consen 10 CVGQKTNQTLSGLKPDTTYYFDVFVVNQLTNNSSAYLGTFARTREENRSKPTRLKDGKLTQVKLKGKGGFKFFSFKVPKR 89 (300)
T ss_pred EcCCCceEEeccCCCCCeEEEEEEEEECCCCceeeeeEEEEEEccccCCCcEEcccCcEEEEEECCcCceeEEEEcCCcC
Confidence 3345799999999999999999999876423 22222233333 22233222 2222222 1 2445566441
Q ss_pred CCCcccEEEEEEECCCC--------C--CCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeee-eccC-
Q psy4956 115 SGKYSGFKLKVISLSEK--------T--PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN-FTTK- 182 (361)
Q Consensus 115 ~~~~~~y~v~~~~~~~~--------~--~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~-~~t~- 182 (361)
......-.+.....++. + ......+ ... ..+.+.++.||..|.+++.+.+....... .-.. .++.
T Consensus 90 ~~~~~~~~l~v~~C~G~V~v~i~r~gk~l~~~~~v-~~~-~~f~l~~~~~g~~Yliri~~~~~~e~~~~-~kV~aast~~ 166 (300)
T PF10179_consen 90 SSTHQSLWLFVQSCSGSVRVEISRNGKILLSQKNV-EGL-RHFRLSGVKPGERYLIRIQISNSDEGPST-FKVQAASTNP 166 (300)
T ss_pred CCCCccEEEEEEeCCCeEEEEEEECCeEEeeeecc-cce-EEEEECCCCCCCeEEEEEEccCCCCCceE-EEEEEecCCc
Confidence 11111111112222211 0 0001011 111 37999999999999999977654332211 1111 2332
Q ss_pred -----CCCCcceEEEe----ccCCeEEEEeecCCCCCcceEEEEEEeCCCCC----------------Cc-----eeEEe
Q psy4956 183 -----PNTPGKFIVWF----RNETTLLVLWQPSYPASIYTHYKVSIDPPDAP----------------ES-----VLYVE 232 (361)
Q Consensus 183 -----p~~p~~l~~~~----~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~----------------~~-----~~~~~ 232 (361)
|.-|.+..+.. .+.++++|.|.+.. +.. ..|.|..+..... .. .....
T Consensus 167 ~~~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~-d~~-~kYCvy~~~~~~~~~~~~~~~~~n~C~~~~sr~k~e~v~Ck 244 (300)
T PF10179_consen 167 SKQPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSP-DRS-IKYCVYRREEHSNYQERSVSRMPNQCLGPESRKKSEKVLCK 244 (300)
T ss_pred ccCCCCCCCCCCceeEEcCCcccceEEEEEecCC-CCC-ceEEEEEEEecCchhhhhhcccCccCCCCCccccceEEEEE
Confidence 56677766643 46689999998753 222 4788866532221 00 01110
Q ss_pred -ecc------CCCCCcEEEecCCCCCCeEEEEEEEEeCCCCC
Q psy4956 233 -KEG------EPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267 (361)
Q Consensus 233 -~~~------~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s 267 (361)
... ........+|.+|+||+.|.|.|.+.-..|.+
T Consensus 245 ~~~~~n~~~~~~~~v~tetI~~L~PG~~Yl~dV~~~~~~G~s 286 (300)
T PF10179_consen 245 YFHSPNSSEDPQRAVTTETIKGLKPGTTYLFDVYVNGPSGQS 286 (300)
T ss_pred EEcCCccccccccccceeecccCCCCcEEEEEEEEecCCCce
Confidence 010 01122345799999999999999998766654
|
The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness. |
| >PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-05 Score=65.76 Aligned_cols=116 Identities=23% Similarity=0.256 Sum_probs=72.6
Q ss_pred CcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEE-EecC------CCCCccceEEeee--cCCceEEEEeeCCCCCCCce
Q psy4956 240 PAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQ-YRTI------PLRPLSFTYDKAS--ITSNSLRVVWEPPKGFSEFD 310 (361)
Q Consensus 240 ~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~-~~t~------~~~p~~l~~~~~~--~~~~si~l~W~~~~~~~~~~ 310 (361)
-..+.+.|+.||..|.+++.+.+.........+. +.+. |.-|.++.+.... -+-++++|.|.+..+. . .
T Consensus 127 ~~~f~l~~~~~g~~Yliri~~~~~~e~~~~~kV~aast~~~~~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d~-~-~ 204 (300)
T PF10179_consen 127 LRHFRLSGVKPGERYLIRIQISNSDEGPSTFKVQAASTNPSKQPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSPDR-S-I 204 (300)
T ss_pred eEEEEECCCCCCCeEEEEEEccCCCCCceEEEEEEecCCcccCCCCCCCCCCceeEEcCCcccceEEEEEecCCCC-C-c
Confidence 3678999999999999999887654433333344 3333 3347777773334 4558999999985441 2 4
Q ss_pred eEEEEEEECCCC-------------C---CCCc---eee-----------cCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 311 KYQVSINVRRPG-------------A---SSTP---ITK-----------SRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 311 ~y~i~~~~~~~~-------------~---~~~~---~~~-----------~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.|.|..++.+.. . .... +.. .....+..++.+ |+||+.|.|.|.+.-
T Consensus 205 kYCvy~~~~~~~~~~~~~~~~~n~C~~~~sr~k~e~v~Ck~~~~~n~~~~~~~~v~tetI~~-L~PG~~Yl~dV~~~~ 281 (300)
T PF10179_consen 205 KYCVYRREEHSNYQERSVSRMPNQCLGPESRKKSEKVLCKYFHSPNSSEDPQRAVTTETIKG-LKPGTTYLFDVYVNG 281 (300)
T ss_pred eEEEEEEEecCchhhhhhcccCccCCCCCccccceEEEEEEEcCCccccccccccceeeccc-CCCCcEEEEEEEEec
Confidence 788876654432 0 0000 100 011223457875 999999999999974
|
The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness. |
| >KOG4802|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-07 Score=77.96 Aligned_cols=130 Identities=20% Similarity=0.232 Sum_probs=83.3
Q ss_pred eEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC---Ccccceeeeec---cCCCCCcceEEEeccCC---eEEEEeec
Q psy4956 135 RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK---ESVAYTSRNFT---TKPNTPGKFIVWFRNET---TLLVLWQP 205 (361)
Q Consensus 135 ~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~---~s~~~~~~~~~---t~p~~p~~l~~~~~~~~---~~~v~W~~ 205 (361)
+........+ .+.+.++.||.-|.|+|.|++..| -+.++...... ..|.+|.++.+..+..+ ...|.|-|
T Consensus 200 Qtv~~t~~e~-~~~~t~~rPgRwyefrvaavn~~G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P 278 (516)
T KOG4802|consen 200 QTVEKTMEEN-TYIFTDMRPGRWYEFRVAAVNAYGFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCP 278 (516)
T ss_pred eeeeecCCCc-eeeeeecCcceeEEEEEeeeecccccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCC
Confidence 3333334444 788899999999999999998543 33333222222 22557778777654443 46788888
Q ss_pred CCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCC
Q psy4956 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265 (361)
Q Consensus 206 ~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~ 265 (361)
+.++-++..|.|.|...-...................+.|.+|.|+..|.|.|+|+.--|
T Consensus 279 ~~sdlPv~~Yki~Ws~~v~s~k~~m~tks~~~k~thq~si~~L~Pns~Y~VevqAi~y~g 338 (516)
T KOG4802|consen 279 SKSDLPVEKYKITWSLYVNSAKASMITKSSYVKDTHQFSIKELLPNSSYYVEVQAISYLG 338 (516)
T ss_pred CCCCCcceeeEEEeehhhhhhhhhcccccceeeccchhhhhhcCCCCeEEEEEEEEEecc
Confidence 877889999999997543211111111111122234566999999999999999998444
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-06 Score=60.11 Aligned_cols=82 Identities=27% Similarity=0.500 Sum_probs=59.7
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeec-CCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~-~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
|.+|.++.+......++.|.|.++.. +....|.|.+.......+. ..... .... .+.+.+|.|++.|.++|++..
T Consensus 1 p~~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~-~~~i~~l~p~~~Y~~~v~a~~ 78 (93)
T cd00063 1 PSPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWK-EVEVTPGSET-SYTLTGLKPGTEYEFRVRAVN 78 (93)
T ss_pred CcCCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCE-EeeccCCccc-EEEEccccCCCEEEEEEEEEC
Confidence 34677788887778999999998753 3577899998875422222 22221 2444 899999999999999999998
Q ss_pred CCCCccc
Q psy4956 167 DSKESVA 173 (361)
Q Consensus 167 ~~~~s~~ 173 (361)
..+.+..
T Consensus 79 ~~~~~~~ 85 (93)
T cd00063 79 GGGESPP 85 (93)
T ss_pred CCccCCC
Confidence 7766643
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.1e-06 Score=57.65 Aligned_cols=85 Identities=25% Similarity=0.371 Sum_probs=60.7
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
|.+|.++.+......++.|.|+++... +.+..|.|.+.......... .... ......+.+.+|.|++.|.|+|.+.
T Consensus 1 p~~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~-~~~~--~~~~~~~~i~~l~p~~~Y~~~v~a~ 77 (93)
T cd00063 1 PSPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKE-VEVT--PGSETSYTLTGLKPGTEYEFRVRAV 77 (93)
T ss_pred CcCCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEE-eecc--CCcccEEEEccccCCCEEEEEEEEE
Confidence 346777888877889999999876432 56789999998764222222 2111 1235789999999999999999999
Q ss_pred eCCCCCCce
Q psy4956 262 SEDEISTPT 270 (361)
Q Consensus 262 ~~~~~s~~~ 270 (361)
+..+.+..+
T Consensus 78 ~~~~~~~~s 86 (93)
T cd00063 78 NGGGESPPS 86 (93)
T ss_pred CCCccCCCc
Confidence 876665443
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG4802|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=4e-06 Score=69.98 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=82.9
Q ss_pred CCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCc--ccee-eEEE---ecCCCCCCccEEEEEe---CCEEEEEee
Q psy4956 41 PNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHD--WLTW-TASI---TTPPDPPTNLSVNVRS---GKTAQIFWS 111 (361)
Q Consensus 41 ~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~--~~~~-~~~~---~t~~~~p~~l~~~~~~---~~~v~l~W~ 111 (361)
.+.++........+.+.++.||..|.|+|.|+|.-|.. +.+. -... .-+|.+|.++.+..+. .-...|-|.
T Consensus 198 hwQtv~~t~~e~~~~~t~~rPgRwyefrvaavn~~G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~ 277 (516)
T KOG4802|consen 198 HWQTVEKTMEENTYIFTDMRPGRWYEFRVAAVNAYGFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWC 277 (516)
T ss_pred cceeeeecCCCceeeeeecCcceeEEEEEeeeecccccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeC
Confidence 35666666556789999999999999999998743332 2221 1111 2246667888776643 234678888
Q ss_pred CCC-CCCcccEEEEEEECCCC---CCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCc
Q psy4956 112 PPI-SGKYSGFKLKVISLSEK---TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171 (361)
Q Consensus 112 ~p~-~~~~~~y~v~~~~~~~~---~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s 171 (361)
|+. +-++.+|.|.|...-.. ............. .+.|.+|.|+..|.|.|.|....|..
T Consensus 278 P~~sdlPv~~Yki~Ws~~v~s~k~~m~tks~~~k~th-q~si~~L~Pns~Y~VevqAi~y~g~~ 340 (516)
T KOG4802|consen 278 PSKSDLPVEKYKITWSLYVNSAKASMITKSSYVKDTH-QFSIKELLPNSSYYVEVQAISYLGSR 340 (516)
T ss_pred CCCCCCcceeeEEEeehhhhhhhhhcccccceeeccc-hhhhhhcCCCCeEEEEEEEEEeccCc
Confidence 866 45789999998653211 1111111111122 34489999999999999999865543
|
|
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.2e-05 Score=53.21 Aligned_cols=77 Identities=22% Similarity=0.449 Sum_probs=52.5
Q ss_pred CCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCC--CCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKT--PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+|.++.+......++.|+|++|......+|.+.|....... ............ .+.+.+|.|++.|.|+|++.+..+
T Consensus 3 ~p~~~~~~~~~~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~~~~~Y~v~v~a~~~~g 81 (83)
T smart00060 3 PPSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSSWKEVNVTPSST-SYTLTGLKPGTEYEFRVRAVNGAG 81 (83)
T ss_pred CCCcEEEEEEeCCEEEEEECCCCCCCCCccEEEEEEEEecCCCccEEEEecCCcc-EEEEeCcCCCCEEEEEEEEEcccC
Confidence 45567777777779999999765222267888876643321 122232333344 899999999999999999998543
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.5e-05 Score=52.68 Aligned_cols=77 Identities=25% Similarity=0.364 Sum_probs=50.5
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCc--eeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPES--VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
+|.++.+......++.|+|+++..... .+|.+.|........ ...... ......+.+.+|.|++.|.|+|.|.+
T Consensus 3 ~p~~~~~~~~~~~~~~v~W~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~~~~~Y~v~v~a~~ 78 (83)
T smart00060 3 PPSNLRVTDVTSTSVTLSWEPPPDDGI-TGYIVGYRVEYREEGSSWKEVNV---TPSSTSYTLTGLKPGTEYEFRVRAVN 78 (83)
T ss_pred CCCcEEEEEEeCCEEEEEECCCCCCCC-CccEEEEEEEEecCCCccEEEEe---cCCccEEEEeCcCCCCEEEEEEEEEc
Confidence 455677777777799999996643332 667777664332211 111111 11147899999999999999999998
Q ss_pred CCC
Q psy4956 263 EDE 265 (361)
Q Consensus 263 ~~~ 265 (361)
..|
T Consensus 79 ~~g 81 (83)
T smart00060 79 GAG 81 (83)
T ss_pred ccC
Confidence 644
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >COG3401 Fibronectin type 3 domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0012 Score=54.36 Aligned_cols=317 Identities=14% Similarity=0.027 Sum_probs=160.8
Q ss_pred CCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCcccee-eEEEec-CCCCCCccEEEE
Q psy4956 23 SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTW-TASITT-PPDPPTNLSVNV 100 (361)
Q Consensus 23 ~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~-~~~~~t-~~~~p~~l~~~~ 100 (361)
-.+.+|.+.....+-.......++.. -.+++....|.+++.|.+..-..+.. ..+... ..-..+ ...+........
T Consensus 3 ~~~~~~~~~~t~~~~~~~~i~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~i~~~~~~~~~~ 80 (343)
T COG3401 3 YDIDGFVLYRTKKDLKLKRIGTIKNK-YQTHYYDEGLEGEESYPYQEGTTKVD-KISYDSERILVKTSFIERVRSVFASL 80 (343)
T ss_pred ccceeEEEEEEcccchhhhhhccccc-hhhhhhhccccccCcceeeecccccc-eeeecCcceEEEeeeccccccccchh
Confidence 35678877766644332222333322 26889999999999999887665543 222111 111111 222222222222
Q ss_pred EeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCC-cccceeeee
Q psy4956 101 RSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE-SVAYTSRNF 179 (361)
Q Consensus 101 ~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~-s~~~~~~~~ 179 (361)
.-+..+.+-|.+..+-.+..|.|+....+.. ..+.-.+.......+.-.+|.++..|...|.+....+. +.+......
T Consensus 81 ~~~~~~~~~w~~~~d~~~~~Y~i~~~~gD~~-f~r~~~~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfsf~gVE~ 159 (343)
T COG3401 81 ERPKSVKVFWSPHPDVSVGKYIIQRQNGDGK-FLRTGLVKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFSFTGVEA 159 (343)
T ss_pred cCcceeeecccccCCCCCCeEEEEEecCchh-hhhhhHHHhccchhheecccccccceeeeEEeecccccceeeeeeeec
Confidence 3456799999997777788999986654322 11111111111114445689999999999999886643 323233333
Q ss_pred ccCCCCCc--ceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 180 TTKPNTPG--KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 180 ~t~p~~p~--~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
+....|++ ++.+.....+.+.|+|+.+.. .+.|+|.-...+........... .+.......+| |..|...
T Consensus 160 ~~~~~P~ei~~~~~~~d~~~~i~ls~dg~~~---~~yy~IY~~~~g~e~~~~ia~t~---~n~y~d~~egl--ga~~~y~ 231 (343)
T COG3401 160 TPKAEPKEITNVRVSFDLGNNIELSEDGSEA---EDYYRIYASDSGNEEYGFIAQTT---ENSYYDVKEGL--GAVEYYK 231 (343)
T ss_pred ccccCCceeeeeeeecCCCCcceeeccCccc---cceEEEeccCCccccccceeecc---ccchhhhhhcc--CceeEEE
Confidence 33333343 344445566789999986532 23677744333322222222211 11122333445 5566677
Q ss_pred EEEEeCCCCCCc-eE--EEEec--CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecC
Q psy4956 258 VQTVSEDEISTP-TT--AQYRT--IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSR 332 (361)
Q Consensus 258 V~a~~~~~~s~~-~~--~~~~t--~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~ 332 (361)
|.++...+.... .. +...+ .+..|.... .....+.+.|.|+..... ....|.+.-...+.. .... .
T Consensus 232 VTtVd~~~~es~lp~~~t~~~~~g~~e~pt~~g---~t~~~s~i~V~~E~~~~~-~av~ytvyr~~~g~~---~~~f--~ 302 (343)
T COG3401 232 VTTVDNTGFESDLPNEPTVGETGGRYEVPTIPG---ETTEASFIGVAAEQNQLR-QAVTYTVYRVEDGTP---TKFF--T 302 (343)
T ss_pred EEEEcCCcceeccCCccccccccCCcccccCCC---ceeeeeeeeEEecccccc-eeeEEeeeeccCCCc---ceee--e
Confidence 777775443211 11 11122 122221111 122334456888775321 233344433333211 1111 1
Q ss_pred CCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 333 DEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 333 ~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
-..+...... +.++..|.+.|.+++..
T Consensus 303 it~~d~~d~~-~ltg~~~~y~v~~v~~~ 329 (343)
T COG3401 303 ITETDGQDND-MLTGVEYRYEVVAVDKA 329 (343)
T ss_pred eeeccccchh-hccccceeEEEEEeccc
Confidence 1234566665 89999999999988643
|
|
| >KOG3632|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.5e-05 Score=73.69 Aligned_cols=201 Identities=18% Similarity=0.277 Sum_probs=121.5
Q ss_pred EEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCC-CCcEEEEEEEEEeCCCCcc
Q psy4956 98 VNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLT-PGGSYQVQLFSVYDSKESV 172 (361)
Q Consensus 98 ~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-p~~~Y~v~v~a~~~~~~s~ 172 (361)
+......++.|.|++|. .+.+..|.+..- ....+.+.+. +.+ ...+..|. .+..|.+.|.+....|.+.
T Consensus 586 ~vkqla~sv~vawepps~pP~~~~~~~~~~~v~----~elrq~l~~g-s~t-ka~~E~ld~~a~s~~isvq~ltSrGsqd 659 (1335)
T KOG3632|consen 586 AVKQLAGSVHVAWEPPSSPPFTAPARMIGATVL----MELRQTLYAG-SLT-KAMQESLDNSAHSGYISVQRLTSRGSQD 659 (1335)
T ss_pred hhhhhccceeeeccCCCCCCccccceeeeeecc----hhhhhhcccc-cch-HHHHhhccccCCceeeehhhhhccCCCC
Confidence 33345678999999976 334556666531 1222222221 122 33333332 2345778888888877776
Q ss_pred cceeeeecc--CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCC
Q psy4956 173 AYTSRNFTT--KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP 250 (361)
Q Consensus 173 ~~~~~~~~t--~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p 250 (361)
......... .+..|.++.+...+.++..++|-+..+ . .-++.|......... ......++|.+|.|
T Consensus 660 ~lrc~Llvgg~a~vvpsqlrv~n~tqtSa~itwvp~ns--n--~~Hviyln~eE~~ps--------~a~~y~ytf~~lrp 727 (1335)
T KOG3632|consen 660 QLRCILLVGGAAPVVPSQLRVWNATQTSAMITWVPFNS--N--FLHVIYLNAEEPRPS--------VAEMYNYTFMRLRP 727 (1335)
T ss_pred cceeeEeccccccccchhhhhhhhhchhhheeeeecCC--C--cceeeecCCccCCCc--------hhhhhHHHHhccCC
Confidence 543333332 267899999999999999999987532 1 123444433332221 11236788999999
Q ss_pred CCeEEEEEEEEeCCCCC----------CceEEEEecCC----CCCccceEEeeecCCceEEEEeeCCC----C---CCCc
Q psy4956 251 GRAYNISVQTVSEDEIS----------TPTTAQYRTIP----LRPLSFTYDKASITSNSLRVVWEPPK----G---FSEF 309 (361)
Q Consensus 251 ~t~Y~v~V~a~~~~~~s----------~~~~~~~~t~~----~~p~~l~~~~~~~~~~si~l~W~~~~----~---~~~~ 309 (361)
++.|.++|-+.-..... ....+.+.|.| .||.+++++ ...+...+.++|.++. | ...+
T Consensus 728 gt~y~a~vea~~p~q~pwdl~~v~~etr~atv~f~tLpAGppappldV~vE-~g~spg~l~vswrPptldsag~sngv~v 806 (1335)
T KOG3632|consen 728 GTDYWASVEAALPRQEPWDLRMVPMETRQATVLFRTLPAGPPAPPLDVKVE-TGGSPGRLEVSWRPPTLDSAGCSNGVAV 806 (1335)
T ss_pred CCccceecccccCcCCCcccccchhhhhccceeeecccCCCCCCchheeee-cCCCCceeeeeccCceeccccccCceee
Confidence 99999999887642111 23334555543 456777774 3556788999999962 2 1467
Q ss_pred eeEEEEEE
Q psy4956 310 DKYQVSIN 317 (361)
Q Consensus 310 ~~y~i~~~ 317 (361)
++|-|...
T Consensus 807 tgYavyad 814 (1335)
T KOG3632|consen 807 TGYAVYAD 814 (1335)
T ss_pred eeeeeeeC
Confidence 88988654
|
|
| >PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0002 Score=50.34 Aligned_cols=81 Identities=17% Similarity=0.233 Sum_probs=55.8
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCC-CCceEEEEEE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLE-PGRTYQVLVK 355 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-p~t~Y~v~V~ 355 (361)
...+|.++++ ...+-...|.|+++.+...-..|.|+|...+.+.+........-..+++.+++.+. +...|.+||+
T Consensus 21 ~lp~P~nv~~---~s~nf~~iL~W~~~~~~~~~~~ytVq~~~~~~~~W~~v~~C~~i~~~~Cdlt~~~~~~~~~Y~~rV~ 97 (107)
T PF01108_consen 21 SLPAPQNVTV---DSVNFKHILRWDPGPGSPPNVTYTVQYKKYGSSSWKDVPGCQNITETSCDLTDETSDPSESYYARVR 97 (107)
T ss_dssp SGSSCEEEEE---EEETTEEEEEEEESTTSSSTEEEEEEEEESSTSCEEEECCEEEESSSEEECTTCCTTTTSEEEEEEE
T ss_pred cCCCCCeeEE---EEECCceEEEeCCCCCCCCCeEEEEEEEecCCcceeeccceecccccceeCcchhhcCcCCEEEEEE
Confidence 4457899998 44456689999996654466889999994444333222112334457899986343 8899999999
Q ss_pred EEeCC
Q psy4956 356 TVSGK 360 (361)
Q Consensus 356 a~~~~ 360 (361)
|..|+
T Consensus 98 A~~~~ 102 (107)
T PF01108_consen 98 AEVGN 102 (107)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99886
|
... |
| >PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.001 Score=46.72 Aligned_cols=71 Identities=21% Similarity=0.420 Sum_probs=47.7
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCC-----CCC---------cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCc
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPI-----SGK---------YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGG 156 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~-----~~~---------~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~ 156 (361)
.||. +.+ ...++.+.|.+.+|. .+. ...|.|.|+..+.. .+......... .+.|.+|.|++
T Consensus 4 gPP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~--~~~~~~~~~~~-~~~l~~L~p~t 78 (106)
T PF09294_consen 4 GPPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSN--EKKKEIETKNS-SVTLSDLKPGT 78 (106)
T ss_dssp -SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTS--CEEEEEESSSE-EEEEES--TTS
T ss_pred cCCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCc--cceEEEeecCC-EEEEeCCCCCC
Confidence 4554 776 557889999998875 111 13599998886543 34444455555 77999999999
Q ss_pred EEEEEEEEEe
Q psy4956 157 SYQVQLFSVY 166 (361)
Q Consensus 157 ~Y~v~v~a~~ 166 (361)
.|.|+|.+..
T Consensus 79 ~YCv~V~~~~ 88 (106)
T PF09294_consen 79 NYCVSVQAFS 88 (106)
T ss_dssp EEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999943
|
They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T .... |
| >COG3401 Fibronectin type 3 domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.032 Score=46.41 Aligned_cols=241 Identities=14% Similarity=0.087 Sum_probs=125.1
Q ss_pred eEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecC-
Q psy4956 11 ANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTP- 89 (361)
Q Consensus 11 ~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~- 89 (361)
..+-+-|--+.+-++..|.|+.-..++. +....+..+.-.-.+.-.+|.++..|...|.+....+.-+.+....-.++
T Consensus 84 ~~~~~~w~~~~d~~~~~Y~i~~~~gD~~-f~r~~~~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfsf~gVE~~~~ 162 (343)
T COG3401 84 KSVKVFWSPHPDVSVGKYIIQRQNGDGK-FLRTGLVKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFSFTGVEATPK 162 (343)
T ss_pred ceeeecccccCCCCCCeEEEEEecCchh-hhhhhHHHhccchhheecccccccceeeeEEeecccccceeeeeeeecccc
Confidence 3355556666677899999988776665 32333333333456677799999999999998776544444443332333
Q ss_pred CCCC--CccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEE--cCCCCCcEEEEEEEEE
Q psy4956 90 PDPP--TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSL--KDLTPGGSYQVQLFSV 165 (361)
Q Consensus 90 ~~~p--~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l--~~L~p~~~Y~v~v~a~ 165 (361)
..|| .++++.....+.+.|+|+.+.. ...|+|.- ...+ ............+ .+.. .+| |..|...|.+.
T Consensus 163 ~~P~ei~~~~~~~d~~~~i~ls~dg~~~--~~yy~IY~-~~~g-~e~~~~ia~t~~n-~y~d~~egl--ga~~~y~VTtV 235 (343)
T COG3401 163 AEPKEITNVRVSFDLGNNIELSEDGSEA--EDYYRIYA-SDSG-NEEYGFIAQTTEN-SYYDVKEGL--GAVEYYKVTTV 235 (343)
T ss_pred cCCceeeeeeeecCCCCcceeeccCccc--cceEEEec-cCCc-cccccceeecccc-chhhhhhcc--CceeEEEEEEE
Confidence 3333 2333334457889999988542 34788853 3222 1222222223333 3333 344 55666666666
Q ss_pred e-CCCCcccceeeee-cc--CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCc
Q psy4956 166 Y-DSKESVAYTSRNF-TT--KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241 (361)
Q Consensus 166 ~-~~~~s~~~~~~~~-~t--~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~ 241 (361)
. .+..+.-...... .+ .+..|.-. -.....+.+.|.|+...... ...|.+ ++-.++......... ..
T Consensus 236 d~~~~es~lp~~~t~~~~~g~~e~pt~~-g~t~~~s~i~V~~E~~~~~~-av~ytv-yr~~~g~~~~~f~it------~~ 306 (343)
T COG3401 236 DNTGFESDLPNEPTVGETGGRYEVPTIP-GETTEASFIGVAAEQNQLRQ-AVTYTV-YRVEDGTPTKFFTIT------ET 306 (343)
T ss_pred cCCcceeccCCccccccccCCcccccCC-CceeeeeeeeEEecccccce-eeEEee-eeccCCCcceeeeee------ec
Confidence 5 3333321111111 11 12122111 11122234568887642222 223333 121222222111111 25
Q ss_pred EEEecCCCCCCeEEEEEEEEeCCCCCC
Q psy4956 242 QAAFKGLVPGRAYNISVQTVSEDEIST 268 (361)
Q Consensus 242 ~~~~~~L~p~t~Y~v~V~a~~~~~~s~ 268 (361)
......+.++..|.+.|.+++..+.+.
T Consensus 307 d~~d~~~ltg~~~~y~v~~v~~~gls~ 333 (343)
T COG3401 307 DGQDNDMLTGVEYRYEVVAVDKAGLSS 333 (343)
T ss_pred cccchhhccccceeEEEEEeccccccc
Confidence 566778899999999999999877553
|
|
| >KOG4806|consensus | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.089 Score=43.90 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=66.1
Q ss_pred cCCCCCcEEEEEEEEEeCCCCcccceeeeec------cCCCCCcceEEEe--ccCCeEEEEeecCCCCCcceEEEEEEeC
Q psy4956 150 KDLTPGGSYQVQLFSVYDSKESVAYTSRNFT------TKPNTPGKFIVWF--RNETTLLVLWQPSYPASIYTHYKVSIDP 221 (361)
Q Consensus 150 ~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~------t~p~~p~~l~~~~--~~~~~~~v~W~~~~~~~~~~~y~v~~~~ 221 (361)
-.+.|+..|..++...++...... .....+ .-|+-|.+-.+.. ...++++|.|.... +. -..|.|....
T Consensus 289 fvv~~~~~~~~rf~~~ndde~~~~-v~V~aSt~~t~~~~P~LP~dTtVk~v~r~CSsAtIaW~gs~-d~-~~kyCIy~~~ 365 (454)
T KOG4806|consen 289 FVVLPGERYLMRFEPSNDDEALQK-VMVAASTEATFRDLPELPQDTTVKNVRRRCSSATIAWNGSP-DE-ELKYCIYVFN 365 (454)
T ss_pred EEecCCCceEEEEEecCCchhhhe-eEeeeecccccCcCCCCCCCceEeeeccccchheeeeccCc-ch-heeEEEEEec
Confidence 357788889988888875533221 212222 2266677766654 46678999997542 22 3456665543
Q ss_pred CCCCCc-----------------e--eEE---e---eccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCC
Q psy4956 222 PDAPES-----------------V--LYV---E---KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267 (361)
Q Consensus 222 ~~~~~~-----------------~--~~~---~---~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s 267 (361)
....+. . ... . .+..+.+...-+|.||.||..|.+.|.|.-..|..
T Consensus 366 ~~~~e~~v~~~~N~C~g~~~~~~s~~v~c~y~hs~~~q~~~~~i~teTI~gL~PgssYlldv~a~~~~g~~ 436 (454)
T KOG4806|consen 366 LPQRERSVVDFTNYCMGFVPKRVSQYVYCEYMHSRERQQSPDNIETETILGLMPGSSYLLDVTANLSMGKP 436 (454)
T ss_pred ccchhhhhhhhhccccCccccceeEEEeEEEecChhhhcchhhhhhhhhcccccCceEEEEEEEcccCCcc
Confidence 221110 0 000 0 01112233456789999999999999997665543
|
|
| >KOG3632|consensus | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0024 Score=59.88 Aligned_cols=241 Identities=16% Similarity=0.117 Sum_probs=132.2
Q ss_pred eCCCceEEEEecCCCCCC--CcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCC-CceEEEEEEEecCCcCcccee
Q psy4956 6 HGVHGANLVIKIPENLSS--DNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLP-GTKYDFYLYYTNSTVHDWLTW 82 (361)
Q Consensus 6 ~~~~~~~l~~~~p~~~~~--~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p-~t~Y~i~V~a~~~~~~~~~~~ 82 (361)
.-.+...+.|+.|..... ++.+|-+.....-- ...-.++ .+...+..|.- +..|.|.|.+....|......
T Consensus 589 qla~sv~vawepps~pP~~~~~~~~~~~v~~elr----q~l~~gs--~tka~~E~ld~~a~s~~isvq~ltSrGsqd~lr 662 (1335)
T KOG3632|consen 589 QLAGSVHVAWEPPSSPPFTAPARMIGATVLMELR----QTLYAGS--LTKAMQESLDNSAHSGYISVQRLTSRGSQDQLR 662 (1335)
T ss_pred hhccceeeeccCCCCCCccccceeeeeecchhhh----hhccccc--chHHHHhhccccCCceeeehhhhhccCCCCcce
Confidence 345667888998886654 66666665432110 1111111 33344444432 234788887765553332222
Q ss_pred eE--EEecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 83 TA--SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 83 ~~--~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
.+ .....+..|.++++...+.++..++|-+- +..+ -++.|... ..... ...... .++|-+|.|++.|.+
T Consensus 663 c~Llvgg~a~vvpsqlrv~n~tqtSa~itwvp~-nsn~--~Hviyln~----eE~~p-s~a~~y-~ytf~~lrpgt~y~a 733 (1335)
T KOG3632|consen 663 CILLVGGAAPVVPSQLRVWNATQTSAMITWVPF-NSNF--LHVIYLNA----EEPRP-SVAEMY-NYTFMRLRPGTDYWA 733 (1335)
T ss_pred eeEeccccccccchhhhhhhhhchhhheeeeec-CCCc--ceeeecCC----ccCCC-chhhhh-HHHHhccCCCCccce
Confidence 22 22234778899999999999999999873 3222 22333221 11111 112223 788999999999999
Q ss_pred EEEEEeCCCCc---------ccceeeeeccC----CCCCcceEEEe-ccCCeEEEEeecCCCC-------CcceEEEEEE
Q psy4956 161 QLFSVYDSKES---------VAYTSRNFTTK----PNTPGKFIVWF-RNETTLLVLWQPSYPA-------SIYTHYKVSI 219 (361)
Q Consensus 161 ~v~a~~~~~~s---------~~~~~~~~~t~----p~~p~~l~~~~-~~~~~~~v~W~~~~~~-------~~~~~y~v~~ 219 (361)
+|-+......+ .......|+|. |.+|.++.+.. .....+.++|.|+.-+ ..+++|.|..
T Consensus 734 ~vea~~p~q~pwdl~~v~~etr~atv~f~tLpAGppappldV~vE~g~spg~l~vswrPptldsag~sngv~vtgYavya 813 (1335)
T KOG3632|consen 734 SVEAALPRQEPWDLRMVPMETRQATVLFRTLPAGPPAPPLDVKVETGGSPGRLEVSWRPPTLDSAGCSNGVAVTGYAVYA 813 (1335)
T ss_pred ecccccCcCCCcccccchhhhhccceeeecccCCCCCCchheeeecCCCCceeeeeccCceeccccccCceeeeeeeeee
Confidence 99887642111 11233445554 56777888764 3556799999876432 3467888865
Q ss_pred eCCCCCCceeEEeeccCCCCCcEEEecCCCCC-CeEEEEEEEEeCCCCC
Q psy4956 220 DPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG-RAYNISVQTVSEDEIS 267 (361)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~-t~Y~v~V~a~~~~~~s 267 (361)
.. ......... ..+.+.+.+..|+-+ ..-.|.|+.....|++
T Consensus 814 dg--qkv~Evafp----tagst~VelsQlq~~l~~~~V~vRtms~~ges 856 (1335)
T KOG3632|consen 814 DG--QKVEEVAFP----TAGSTKVELSQLQDGLYHGAVGVRTMSVPGES 856 (1335)
T ss_pred CC--ceeeeeecc----cCCceEEEeeeehhhheecceeEEecccCccc
Confidence 41 111222121 112345555555553 2335666666555544
|
|
| >PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0059 Score=42.85 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=56.0
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEee-cCCCCceEEEcCCC--CCcEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGF-TENPPAGYSLKDLT--PGGSYQVQL 162 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~~L~--p~~~Y~v~v 162 (361)
.....+|.++++... +-...|+|+++. ...-..|.|+|+......|.....+ ..... .+.|+... +...|.++|
T Consensus 19 ~~~lp~P~nv~~~s~-nf~~iL~W~~~~~~~~~~~ytVq~~~~~~~~W~~v~~C~~i~~~-~Cdlt~~~~~~~~~Y~~rV 96 (107)
T PF01108_consen 19 SASLPAPQNVTVDSV-NFKHILRWDPGPGSPPNVTYTVQYKKYGSSSWKDVPGCQNITET-SCDLTDETSDPSESYYARV 96 (107)
T ss_dssp -SSGSSCEEEEEEEE-TTEEEEEEEESTTSSSTEEEEEEEEESSTSCEEEECCEEEESSS-EEECTTCCTTTTSEEEEEE
T ss_pred cccCCCCCeeEEEEE-CCceEEEeCCCCCCCCCeEEEEEEEecCCcceeeccceeccccc-ceeCcchhhcCcCCEEEEE
Confidence 345667899998875 556899999944 3455689999994433333332111 22234 88887644 788999999
Q ss_pred EEEeCCCCc
Q psy4956 163 FSVYDSKES 171 (361)
Q Consensus 163 ~a~~~~~~s 171 (361)
+|..++..|
T Consensus 97 ~A~~~~~~S 105 (107)
T PF01108_consen 97 RAEVGNQTS 105 (107)
T ss_dssp EEEETTEEE
T ss_pred EEEeCCccC
Confidence 999877655
|
... |
| >KOG4806|consensus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.14 Score=42.77 Aligned_cols=108 Identities=20% Similarity=0.261 Sum_probs=64.2
Q ss_pred CCCCCCeEEEEEEEEeCCCCCCceEEEEec------CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECC
Q psy4956 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRT------IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRR 320 (361)
Q Consensus 247 ~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t------~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~ 320 (361)
.+.++..|.+++...|.+..-.-..+-+.| -|.-|.+-.+....-.-++.++.|....+ .-..|.|.....+
T Consensus 290 vv~~~~~~~~rf~~~ndde~~~~v~V~aSt~~t~~~~P~LP~dTtVk~v~r~CSsAtIaW~gs~d--~~~kyCIy~~~~~ 367 (454)
T KOG4806|consen 290 VVLPGERYLMRFEPSNDDEALQKVMVAASTEATFRDLPELPQDTTVKNVRRRCSSATIAWNGSPD--EELKYCIYVFNLP 367 (454)
T ss_pred EecCCCceEEEEEecCCchhhheeEeeeecccccCcCCCCCCCceEeeeccccchheeeeccCcc--hheeEEEEEeccc
Confidence 466788888888888755433222233333 34558887774345566899999987543 3456777655543
Q ss_pred CCCCC-------------C---ce-----------eecCCCCceeEeccCCCCCceEEEEEEEE
Q psy4956 321 PGASS-------------T---PI-----------TKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357 (361)
Q Consensus 321 ~~~~~-------------~---~~-----------~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 357 (361)
..+.. . .. .....+...-++.+ |.||..|.+.|.|.
T Consensus 368 ~~e~~v~~~~N~C~g~~~~~~s~~v~c~y~hs~~~q~~~~~i~teTI~g-L~PgssYlldv~a~ 430 (454)
T KOG4806|consen 368 QRERSVVDFTNYCMGFVPKRVSQYVYCEYMHSRERQQSPDNIETETILG-LMPGSSYLLDVTAN 430 (454)
T ss_pred chhhhhhhhhccccCccccceeEEEeEEEecChhhhcchhhhhhhhhcc-cccCceEEEEEEEc
Confidence 21000 0 00 00112334456764 99999999999985
|
|
| >PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0054 Score=43.00 Aligned_cols=72 Identities=25% Similarity=0.273 Sum_probs=46.2
Q ss_pred CCCcceEEEeccCCeEEEEeecCC-----CC--------CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSY-----PA--------SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP 250 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~-----~~--------~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p 250 (361)
.||. +.+ .....++.|.+.+|. .. -..-.|.|.++..+........... ...+.|.+|.|
T Consensus 4 gPP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~~~~~~~~~~-----~~~~~l~~L~p 76 (106)
T PF09294_consen 4 GPPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSNEKKKEIETK-----NSSVTLSDLKP 76 (106)
T ss_dssp -SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTSCEEEEEESS-----SEEEEEES--T
T ss_pred cCCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCccceEEEeec-----CCEEEEeCCCC
Confidence 3455 777 567789999998764 01 0124699998877665322222222 36679999999
Q ss_pred CCeEEEEEEEEe
Q psy4956 251 GRAYNISVQTVS 262 (361)
Q Consensus 251 ~t~Y~v~V~a~~ 262 (361)
++.|.|+|++..
T Consensus 77 ~t~YCv~V~~~~ 88 (106)
T PF09294_consen 77 GTNYCVSVQAFS 88 (106)
T ss_dssp TSEEEEEEEEEE
T ss_pred CCCEEEEEEEEe
Confidence 999999999944
|
They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T .... |
| >KOG1225|consensus | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0053 Score=54.97 Aligned_cols=156 Identities=22% Similarity=0.192 Sum_probs=102.4
Q ss_pred CcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCC
Q psy4956 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265 (361)
Q Consensus 186 p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~ 265 (361)
|..+.........+.+.|.. ....+.|...+.......... ..+.+.....+.+..|.|++.|.++|+++....
T Consensus 369 ~~~~~~~~cs~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 442 (525)
T KOG1225|consen 369 PSLLLITECSPPSLCIAGVG---RRRVTHCAGTYCPLGESGGDL---QGRVPGDANSVDIQGLEPGDEYNCSVNTVAANI 442 (525)
T ss_pred chhhcccccCCCceeecccc---ccccccccccccccccCCCcc---ceeeccceeeeeeeeecCCcceeeehhhhhhhh
Confidence 44444555666678888872 223344555444422111111 112234457888999999999999999998766
Q ss_pred CCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCC
Q psy4956 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLE 345 (361)
Q Consensus 266 ~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 345 (361)
.+.+......+...-+..+.+ .....+++.+.|..|.. ....+.+.+..... +.... .......+.+..++ |.
T Consensus 443 ~~~~~~~~~~~~~~~~g~~~v--~~~~~~s~e~~g~~~s~--~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-l~ 515 (525)
T KOG1225|consen 443 GSLPKDKSETTVLCWNGGLCV--DGETESSLEVGGPCPSS--GTCGWEVRCGPCGN-DGGVN-AEPPPECTSYDRTG-LG 515 (525)
T ss_pred ccCCcccccceEeecCCceee--eeeeeccccccCCCCCc--cccceEEEeeecCc-ccccc-cCCCCCCCCCCccC-cc
Confidence 666665555555567788888 88999999999999876 67889999833221 11121 22233556788886 99
Q ss_pred CCceEEEEE
Q psy4956 346 PGRTYQVLV 354 (361)
Q Consensus 346 p~t~Y~v~V 354 (361)
|++.|.+.+
T Consensus 516 ~c~~~~~~~ 524 (525)
T KOG1225|consen 516 PCTEYEVSV 524 (525)
T ss_pred cccceeccc
Confidence 999999875
|
|
| >KOG4367|consensus | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0039 Score=52.97 Aligned_cols=72 Identities=14% Similarity=0.226 Sum_probs=56.3
Q ss_pred cCCeEEEEee-cCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE
Q psy4956 195 NETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT 271 (361)
Q Consensus 195 ~~~~~~v~W~-~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~ 271 (361)
..+++++.|+ |+......++|.++....++.....+.-. ..+.+++.||.-++.|..+|.++|..|.++.+.
T Consensus 451 ~nns~t~~wkqp~~~~~~~dg~~leld~g~~g~frevy~g-----~etmctvdglhfns~y~arvka~n~tg~s~ys~ 523 (699)
T KOG4367|consen 451 HNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVG-----KETMCTVDGLHFNSTYNARVKAFNKTGVSPYSK 523 (699)
T ss_pred cCCceEEEeecCCCCCCCCcceEEEeecCCCCceeEEEec-----CceeEEecceecchhHHHHHHHhhccCCCcccc
Confidence 4568999997 55444778999999998877664443322 238899999999999999999999999886554
|
|
| >KOG4367|consensus | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0048 Score=52.48 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=56.6
Q ss_pred CCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccc
Q psy4956 7 GVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWL 80 (361)
Q Consensus 7 ~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~ 80 (361)
.+..+.|+|.-|.+...+++||.++....+|..+.++ ..+. ++-+++.+|.-++.|.-+|.++|..|-+..
T Consensus 451 ~nns~t~~wkqp~~~~~~~dg~~leld~g~~g~frev-y~g~--etmctvdglhfns~y~arvka~n~tg~s~y 521 (699)
T KOG4367|consen 451 HNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREV-YVGK--ETMCTVDGLHFNSTYNARVKAFNKTGVSPY 521 (699)
T ss_pred cCCceEEEeecCCCCCCCCcceEEEeecCCCCceeEE-EecC--ceeEEecceecchhHHHHHHHhhccCCCcc
Confidence 4567889999999999999999999987666554222 2223 699999999999999999999998744433
|
|
| >KOG1225|consensus | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.011 Score=52.95 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=81.9
Q ss_pred CccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEEC
Q psy4956 49 DIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISL 128 (361)
Q Consensus 49 ~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~ 128 (361)
.+...+.+..|+|++.|.+++++.... ..+........+....+..+.+.....+++.+.|..|. .....+.+.|..
T Consensus 415 ~~~~~~~~~~~~~g~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~g~~~v~~~~~~s~e~~g~~~s-~~~~~~~~~~~~- 491 (525)
T KOG1225|consen 415 GDANSVDIQGLEPGDEYNCSVNTVAAN-IGSLPKDKSETTVLCWNGGLCVDGETESSLEVGGPCPS-SGTCGWEVRCGP- 491 (525)
T ss_pred cceeeeeeeeecCCcceeeehhhhhhh-hccCCcccccceEeecCCceeeeeeeeccccccCCCCC-ccccceEEEeee-
Confidence 348999999999999999999997766 44445556666677778889999999999999999975 456788888833
Q ss_pred CCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
......-...+..... .+..++|.|++.|.+.+
T Consensus 492 ~~~~~~~~~~~~~~~~-~~~~~~l~~c~~~~~~~ 524 (525)
T KOG1225|consen 492 CGNDGGVNAEPPPECT-SYDRTGLGPCTEYEVSV 524 (525)
T ss_pred cCcccccccCCCCCCC-CCCccCcccccceeccc
Confidence 2222222233333444 88899999999998764
|
|
| >PF09240 IL6Ra-bind: Interleukin-6 receptor alpha chain, binding; InterPro: IPR015321 Members of this entry adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.26 Score=33.88 Aligned_cols=87 Identities=15% Similarity=0.105 Sum_probs=55.7
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCC----CCeEEEEEEE
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP----GRAYNISVQT 260 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p----~t~Y~v~V~a 260 (361)
+|.+|.....+...|..+|.+......-..|.+.|+.................+....+.|..... ...|.|.|.+
T Consensus 1 ~~~nlsC~~~~~~~m~CtW~~g~~~~~~t~y~L~~~~~~~~~~~eC~~y~~~~~~~~gC~~~~~~~~~~~~~~~~v~V~~ 80 (99)
T PF09240_consen 1 KPQNLSCFIYNLEYMNCTWEPGKEAPPDTQYTLYYWYSPLEEEKECPHYSKDSGTRIGCQFPVSEIDSSEFSQYNVCVNG 80 (99)
T ss_dssp S-EEEEEEEETTTEEEEEEECCTTCSTTEEEEEEEEETTSSSEEEESEEEESTSSEEEEEEESCTT-TTTTSEEEEEEEE
T ss_pred CCeeCEEEEECCEEEEEEECCCCCCCCcccEEEEEEcCCCCccccCCCccccCCceeEEEecCCCccccccceEEEEEEe
Confidence 367888888888999999988644445579999998765433322222222122245566665554 3589999999
Q ss_pred EeCCCCCCceE
Q psy4956 261 VSEDEISTPTT 271 (361)
Q Consensus 261 ~~~~~~s~~~~ 271 (361)
.+..+.-.+..
T Consensus 81 ss~~~~i~~~~ 91 (99)
T PF09240_consen 81 SSSAGSIRSSD 91 (99)
T ss_dssp EETTEEEECEE
T ss_pred ccCCCccCCcc
Confidence 88766444443
|
They are required for binding to the cytokine Interleukin-6 []. ; PDB: 1N26_A 1P9M_C 3LB6_C 1PVH_A 3L5H_A 1BQU_A 1I1R_A 3QT2_B 3BPN_C 3BPO_C .... |
| >PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.11 Score=35.96 Aligned_cols=81 Identities=19% Similarity=0.292 Sum_probs=54.3
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcE-----EEec--CCCCCCeE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ-----AAFK--GLVPGRAY 254 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~L~p~t~Y 254 (361)
.|..|.++.....+...++.-|++....+.-..|.+.|...+ .......... ....++ +.|. +..-.+.|
T Consensus 7 ~p~~P~~~~C~S~~~etftC~W~~g~~~~l~~~y~L~Y~~~~-~~~~eCp~~~--~~~~ns~~~~~C~F~~~~t~lf~~y 83 (104)
T PF09067_consen 7 PPEKPENLKCFSREMETFTCFWEPGSEGNLPTNYTLFYKKEG-EEWKECPDYS--TSGPNSTVRHICYFPKSDTSLFVPY 83 (104)
T ss_dssp HCCCCEEEEEEBSSSS-EEEEEEEESSSTSTCEEEEEEEETT-SEEEEESESS--TTETTEEEEEEEEE-CCGCSSSSEE
T ss_pred CCCCCccCccCCCCCCcEEEEeeCCCCCCCCCcEEEEEEeCC-CCCccCCCeE--ecCCCCceeEEEEcCCCCeEEEEEE
Confidence 367899999999999999999998744333345999998765 2222222111 111233 5554 78889999
Q ss_pred EEEEEEEeCCC
Q psy4956 255 NISVQTVSEDE 265 (361)
Q Consensus 255 ~v~V~a~~~~~ 265 (361)
.|+|.|.+..|
T Consensus 84 ~i~V~a~~~~~ 94 (104)
T PF09067_consen 84 CIQVEATNALG 94 (104)
T ss_dssp EEEEEEEETTE
T ss_pred EEEEEeccCCC
Confidence 99999988765
|
The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C .... |
| >KOG4152|consensus | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.48 Score=42.07 Aligned_cols=68 Identities=16% Similarity=0.307 Sum_probs=46.7
Q ss_pred cCCCCCcEEEEEEEEEeCCCCcccceeeeeccC----CCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEE
Q psy4956 150 KDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK----PNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVS 218 (361)
Q Consensus 150 ~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~----p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~ 218 (361)
..|-+|+.|.|+|.+.++.|.+..+....+.|- |.+|..+.+. .+-..+.+.|+++..+ +.|..|...
T Consensus 652 ~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri~-k~~eGi~l~weppt~p~sg~Iieys~y 725 (830)
T KOG4152|consen 652 TSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARIK-KTIEGISLVWEPPTKPGSGTIIEYSPY 725 (830)
T ss_pred cccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCccccccc-ccccceeecccCCCCCCCcceEEeehh
Confidence 468899999999999999887765544444433 5566666554 3445799999987544 455555543
|
|
| >COG4733 Phage-related protein, tail component [Function unknown] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.19 Score=47.19 Aligned_cols=115 Identities=18% Similarity=0.232 Sum_probs=67.2
Q ss_pred CcEEEecCCCCCCeEEEEEEEEeCCCCC-Cce-EEEEe-cCCC--CCccceEEeeecCCceEEEEeeCCCCCCCceeEEE
Q psy4956 240 PAQAAFKGLVPGRAYNISVQTVSEDEIS-TPT-TAQYR-TIPL--RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQV 314 (361)
Q Consensus 240 ~~~~~~~~L~p~t~Y~v~V~a~~~~~~s-~~~-~~~~~-t~~~--~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i 314 (361)
...+.+.+|.+| .|.++|+|+|.-+.. .+. ...+. ..+. +|..+......+ .-.+++.|-.|.+.-++.+-++
T Consensus 659 ~~~~~~~gi~~G-qY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~i-t~~~~l~v~dPt~~~d~~~sei 736 (952)
T COG4733 659 AAGFDVEGIPAG-QYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVII-TLVIRLVVGDPTGAVDITSTEI 736 (952)
T ss_pred ccceeecCcCcc-ceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEEE-EeeeeEEEecCCcceEEeeeee
Confidence 367899999996 999999999976643 333 22221 2222 233333310222 2357889988866445666667
Q ss_pred EEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 315 SINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
++....+++......-. .......-. +|+||..|.|++++++
T Consensus 737 ~~s~~~d~~~~Ar~LG~-~~~~~~~~~-~i~~g~~~~F~~R~Vn 778 (952)
T COG4733 737 RSAVIADGNFQARSLGN-LNYPGLFSV-GIQAGLTFWFRNRNVD 778 (952)
T ss_pred eeeccccchhHHhhhhc-ccccccccc-CcCCCceEEEEeeecc
Confidence 77766654442211111 111111113 4999999999999986
|
|
| >KOG4152|consensus | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.22 Score=44.12 Aligned_cols=67 Identities=24% Similarity=0.378 Sum_probs=44.3
Q ss_pred cCCCCCCeEEEEEEEEeCCCCCCceEE--EEecCCC---CCccceEEeeecCCceEEEEeeCCCC--CCCceeEEEE
Q psy4956 246 KGLVPGRAYNISVQTVSEDEISTPTTA--QYRTIPL---RPLSFTYDKASITSNSLRVVWEPPKG--FSEFDKYQVS 315 (361)
Q Consensus 246 ~~L~p~t~Y~v~V~a~~~~~~s~~~~~--~~~t~~~---~p~~l~~~~~~~~~~si~l~W~~~~~--~~~~~~y~i~ 315 (361)
..|.+|+.|.|+|.|+++.|.++...+ ...+.|. +|..+.. ..+-..+.+.|++|.. .+.|..|...
T Consensus 652 ~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri---~k~~eGi~l~weppt~p~sg~Iieys~y 725 (830)
T KOG4152|consen 652 TSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARI---KKTIEGISLVWEPPTKPGSGTIIEYSPY 725 (830)
T ss_pred cccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCcccccc---cccccceeecccCCCCCCCcceEEeehh
Confidence 468899999999999999887765543 2233444 4554444 3344579999999743 2355555543
|
|
| >KOG1948|consensus | Back alignment and domain information |
|---|
Probab=92.78 E-value=9.7 Score=36.71 Aligned_cols=148 Identities=14% Similarity=0.095 Sum_probs=68.1
Q ss_pred ceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCC-cCccceeeEEEec
Q psy4956 10 GANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST-VHDWLTWTASITT 88 (361)
Q Consensus 10 ~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~-~~~~~~~~~~~~t 88 (361)
-..+++..-.+...++.|--|...... ..+...+... .-...+..|.||.-| + ++.... ..+.....+...
T Consensus 820 l~~vsv~vkdea~q~LpgvLLSLsGg~--~yRsNlvtgd--ng~~nf~sLsPgqyy-l--RpmlKEykFePst~mIevk- 891 (1165)
T KOG1948|consen 820 LSQVSVKVKDEATQPLPGVLLSLSGGK--DYRSNLVTGD--NGHKNFVSLSPGQYY-L--RPMLKEYKFEPSTSMIEVK- 891 (1165)
T ss_pred eeEEEEEEeccCCCcCCcEEEEEecCc--chhhccccCC--CceeEEeecCcchhh-h--hhHHHhcCcCCCceeEEec-
Confidence 345666666666677777777775532 2234444444 567788889998743 2 221111 011111111111
Q ss_pred CCCCCCccEEEEE-eCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 89 PPDPPTNLSVNVR-SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 89 ~~~~p~~l~~~~~-~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
...-.++.+... ..-++.=+=......+..+-.|+-...+......+..... .- .|.|.||.|++.|.+++.+..+
T Consensus 892 -eGq~~~vvl~gkRvAySayGtvssLsGdp~~gVaieA~sdn~~~y~eeattde-nG-~yRiRGL~Pdc~Y~V~vk~~~~ 968 (1165)
T KOG1948|consen 892 -EGQHENVVLKGKRVAYSAYGTVSSLSGDPMKGVAIEALSDNCDLYQEEATTDE-NG-TYRIRGLLPDCEYQVHVKSYAD 968 (1165)
T ss_pred -cCceEEEEEEEEEEEEEeeeehhhccCCcccCeEEEEecCCCCcccccccccc-CC-cEEEeccCCCceEEEEEeeccC
Confidence 111111111100 0000000000000122344455544332222222222222 23 6999999999999999999854
Q ss_pred C
Q psy4956 168 S 168 (361)
Q Consensus 168 ~ 168 (361)
+
T Consensus 969 n 969 (1165)
T KOG1948|consen 969 N 969 (1165)
T ss_pred C
Confidence 3
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=92.35 E-value=1.7 Score=39.09 Aligned_cols=73 Identities=10% Similarity=0.067 Sum_probs=42.9
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeE------Eee--ccCCCCCcEEEecCCCCCCeE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY------VEK--EGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~L~p~t~Y 254 (361)
+..|+.+.+.-.+.+++.|+|.-...... .|.|....+...... ... ...++....+.|++|+|++.|
T Consensus 41 ~~~P~qvhls~~~~~~m~V~W~T~~~~~~----~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y 116 (427)
T PLN02533 41 PTHPDQVHISLVGPDKMRISWITQDSIPP----SVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVY 116 (427)
T ss_pred CCCCceEEEEEcCCCeEEEEEECCCCCCC----EEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCCCCEE
Confidence 55688888877778899999965422222 244543222111100 100 001222356789999999999
Q ss_pred EEEEE
Q psy4956 255 NISVQ 259 (361)
Q Consensus 255 ~v~V~ 259 (361)
..+|.
T Consensus 117 ~Yrvg 121 (427)
T PLN02533 117 YYKCG 121 (427)
T ss_pred EEEEC
Confidence 99984
|
|
| >COG4733 Phage-related protein, tail component [Function unknown] | Back alignment and domain information |
|---|
Probab=91.66 E-value=3 Score=39.76 Aligned_cols=123 Identities=7% Similarity=-0.001 Sum_probs=66.6
Q ss_pred ccceEEecCCCCCceEEEEEEEecCCcCcccee-eEEEe-cCCCCC--CccEEEEEe-CCEEEEEeeCCCCCCcc--cEE
Q psy4956 50 IKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTW-TASIT-TPPDPP--TNLSVNVRS-GKTAQIFWSPPISGKYS--GFK 122 (361)
Q Consensus 50 ~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~-~~~~~-t~~~~p--~~l~~~~~~-~~~v~l~W~~p~~~~~~--~y~ 122 (361)
.+..+.+.+|.+ .+|.++|+|.|..+..+.+. ...+. ..+..| ..+...... .-.+.+.|-.|. +.++ .-.
T Consensus 658 ~~~~~~~~gi~~-GqY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~it~~~~l~v~dPt-~~~d~~~se 735 (952)
T COG4733 658 SAAGFDVEGIPA-GQYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVIITLVIRLVVGDPT-GAVDITSTE 735 (952)
T ss_pred cccceeecCcCc-cceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEEEEeeeeEEEecCC-cceEEeeee
Confidence 378999999999 56999999998765555544 23332 222222 122211111 235678887764 3222 222
Q ss_pred EEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccce
Q psy4956 123 LKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYT 175 (361)
Q Consensus 123 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~ 175 (361)
+++... .....+...+..-......-.+|.|+..|.|++++++..|.+.++.
T Consensus 736 i~~s~~-~d~~~~Ar~LG~~~~~~~~~~~i~~g~~~~F~~R~Vn~vG~~~~~e 787 (952)
T COG4733 736 IRSAVI-ADGNFQARSLGNLNYPGLFSVGIQAGLTFWFRNRNVDLVGNNDKWE 787 (952)
T ss_pred eeeecc-ccchhHHhhhhccccccccccCcCCCceEEEEeeecccccccccce
Confidence 222221 1111111111111111222268999999999999999887776543
|
|
| >PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators | Back alignment and domain information |
|---|
Probab=90.64 E-value=1 Score=28.08 Aligned_cols=25 Identities=16% Similarity=0.280 Sum_probs=18.8
Q ss_pred eEEecCCCCCceEEEEEEEecCCcCc
Q psy4956 53 NIEFSEGLPGTKYDFYLYYTNSTVHD 78 (361)
Q Consensus 53 ~~~i~~L~p~t~Y~i~V~a~~~~~~~ 78 (361)
++.+.+|.||+ |.|.|+|.+..+..
T Consensus 30 ~~~~~~L~~G~-Y~l~V~a~~~~~~~ 54 (66)
T PF07495_consen 30 SISYTNLPPGK-YTLEVRAKDNNGKW 54 (66)
T ss_dssp EEEEES--SEE-EEEEEEEEETTS-B
T ss_pred EEEEEeCCCEE-EEEEEEEECCCCCc
Confidence 99999999998 99999998765343
|
However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B. |
| >PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators | Back alignment and domain information |
|---|
Probab=90.34 E-value=1.4 Score=27.39 Aligned_cols=22 Identities=23% Similarity=0.502 Sum_probs=17.4
Q ss_pred eeEeccCCCCCceEEEEEEEEeCC
Q psy4956 337 QCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 337 ~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.+.+++ |.|| .|.|.|+|.+..
T Consensus 30 ~~~~~~-L~~G-~Y~l~V~a~~~~ 51 (66)
T PF07495_consen 30 SISYTN-LPPG-KYTLEVRAKDNN 51 (66)
T ss_dssp EEEEES---SE-EEEEEEEEEETT
T ss_pred EEEEEe-CCCE-EEEEEEEEECCC
Confidence 899986 9999 999999998753
|
However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B. |
| >PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors | Back alignment and domain information |
|---|
Probab=89.57 E-value=3 Score=28.89 Aligned_cols=80 Identities=20% Similarity=0.299 Sum_probs=52.2
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCc-ccEEEEEEECCCCCCCeEEeec-CCCCce-----EEEc--CCCCCcEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKY-SGFKLKVISLSEKTPPRIIGFT-ENPPAG-----YSLK--DLTPGGSYQ 159 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~-~~y~v~~~~~~~~~~~~~~~~~-~~~~~~-----~~l~--~L~p~~~Y~ 159 (361)
.|..|.++.-.......++.-|++...+.. ..|.+.|.... ..+..+.... ...+ + +.+. +..-.+.|.
T Consensus 7 ~p~~P~~~~C~S~~~etftC~W~~g~~~~l~~~y~L~Y~~~~-~~~~eCp~~~~~~~n-s~~~~~C~F~~~~t~lf~~y~ 84 (104)
T PF09067_consen 7 PPEKPENLKCFSREMETFTCFWEPGSEGNLPTNYTLFYKKEG-EEWKECPDYSTSGPN-STVRHICYFPKSDTSLFVPYC 84 (104)
T ss_dssp HCCCCEEEEEEBSSSS-EEEEEEEESSSTSTCEEEEEEEETT-SEEEEESESSTTETT-EEEEEEEEE-CCGCSSSSEEE
T ss_pred CCCCCccCccCCCCCCcEEEEeeCCCCCCCCCcEEEEEEeCC-CCCccCCCeEecCCC-CceeEEEEcCCCCeEEEEEEE
Confidence 356677777766677889999998764442 34999998764 2333332222 1223 5 6665 677789999
Q ss_pred EEEEEEeCCCC
Q psy4956 160 VQLFSVYDSKE 170 (361)
Q Consensus 160 v~v~a~~~~~~ 170 (361)
|+|.+.+..+.
T Consensus 85 i~V~a~~~~~~ 95 (104)
T PF09067_consen 85 IQVEATNALGS 95 (104)
T ss_dssp EEEEEEETTEE
T ss_pred EEEEeccCCCc
Confidence 99999987764
|
The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C .... |
| >PF10342 GPI-anchored: Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family; InterPro: IPR018466 This entry represents glycoproteins involved in cell wall (1-->6)-beta-glucan assembly | Back alignment and domain information |
|---|
Probab=87.26 E-value=3.5 Score=27.72 Aligned_cols=62 Identities=10% Similarity=0.197 Sum_probs=39.4
Q ss_pred ceEEEEeeCCCCCCCceeEEEEEEECCCCCC--CCceee-cC--CCCceeEeccCCCCCceEEEEEEEE
Q psy4956 294 NSLRVVWEPPKGFSEFDKYQVSINVRRPGAS--STPITK-SR--DEPTQCDMSEGLEPGRTYQVLVKTV 357 (361)
Q Consensus 294 ~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~--~~~~~~-~~--~~~~~~~~~~~L~p~t~Y~v~V~a~ 357 (361)
..+.|+|+.... ....|.|.+........ ...+.. .. .....+.+..+|.++..|.|++...
T Consensus 13 ~~~~I~W~~~~~--~~~~~~I~L~~g~~~~~~~~~~ia~~v~~~~gs~~~~~p~~l~~~~~Y~i~~~~~ 79 (93)
T PF10342_consen 13 QPITITWTSDGT--DPGNVTIYLCNGNNTNLNFVQTIASNVSNSDGSYTWTIPSDLPSGGDYFIQIVNS 79 (93)
T ss_pred CcEEEEEeCCCC--CCcEEEEEEEcCCCCCcceeEEEEecccCCCCEEEEEcCCCCCCCCcEEEEEEEC
Confidence 679999998754 44778888777654211 111111 11 2345566644599999999999843
|
In yeast a null mutation leads to severe growth defects, aberrant multi-budded morphology, and mating defects [, ]. The entry includes DRMIP and Hesp-379, which are involved in both fruiting body formation and in host attack respectively. Hesp-379 is a haustorially expressed secreted protein; the haustorium being the small sucker that penetrates host tissue []. |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=83.99 E-value=5.8 Score=35.70 Aligned_cols=72 Identities=11% Similarity=0.165 Sum_probs=41.2
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCce-----e-----ecCCCCceeEeccCCCC
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPI-----T-----KSRDEPTQCDMSEGLEP 346 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~L~p 346 (361)
.+..|..+.+ .-.+.++++|+|.-..... -.|+|-...+....... . ...+..-.+.|++ |+|
T Consensus 40 ~~~~P~qvhl--s~~~~~~m~V~W~T~~~~~----~~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~-L~p 112 (427)
T PLN02533 40 DPTHPDQVHI--SLVGPDKMRISWITQDSIP----PSVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGP-LKP 112 (427)
T ss_pred CCCCCceEEE--EEcCCCeEEEEEECCCCCC----CEEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCC-CCC
Confidence 3446788888 5556889999998765311 22444332211000000 0 0112223567885 999
Q ss_pred CceEEEEEE
Q psy4956 347 GRTYQVLVK 355 (361)
Q Consensus 347 ~t~Y~v~V~ 355 (361)
+|.|..+|-
T Consensus 113 ~T~Y~Yrvg 121 (427)
T PLN02533 113 NTVYYYKCG 121 (427)
T ss_pred CCEEEEEEC
Confidence 999999985
|
|
| >KOG1948|consensus | Back alignment and domain information |
|---|
Probab=83.30 E-value=47 Score=32.43 Aligned_cols=142 Identities=12% Similarity=0.032 Sum_probs=67.7
Q ss_pred CCCCcceEEEEEEc------CCCCCCCCeEEeecC-------------ccceEEecCCCCCceEEEEEEEecCC--cCcc
Q psy4956 21 LSSDNSTYRLDYIP------AHGHPPPNTTYVSRD-------------IKDNIEFSEGLPGTKYDFYLYYTNST--VHDW 79 (361)
Q Consensus 21 ~~~~~~~Y~v~~~~------~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~i~V~a~~~~--~~~~ 79 (361)
...-+.|||+-|+. -+|++..-+.+.... ..-.|.|.+|.|+..|.++|.+..+. ...+
T Consensus 896 ~~vvl~gkRvAySayGtvssLsGdp~~gVaieA~sdn~~~y~eeattdenG~yRiRGL~Pdc~Y~V~vk~~~~n~~iers 975 (1165)
T KOG1948|consen 896 ENVVLKGKRVAYSAYGTVSSLSGDPMKGVAIEALSDNCDLYQEEATTDENGTYRIRGLLPDCEYQVHVKSYADNSPIERS 975 (1165)
T ss_pred EEEEEEEEEEEEEeeeehhhccCCcccCeEEEEecCCCCccccccccccCCcEEEeccCCCceEEEEEeeccCCCccccc
Confidence 34467788888754 234443333333321 13579999999999999999986432 1222
Q ss_pred ceeeEEEecCCCCCCccEEEEEe-CCE--EEEEeeCCCCCCcc-cEEEEEEECCCCCCCeEEeecCCCCceEEEc-CCCC
Q psy4956 80 LTWTASITTPPDPPTNLSVNVRS-GKT--AQIFWSPPISGKYS-GFKLKVISLSEKTPPRIIGFTENPPAGYSLK-DLTP 154 (361)
Q Consensus 80 ~~~~~~~~t~~~~p~~l~~~~~~-~~~--v~l~W~~p~~~~~~-~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~p 154 (361)
.+...+....-.-..++.+.... ... +...=..-.+..+. .-.+.|+..++......... ... .+-+. -+.+
T Consensus 976 ~P~s~tv~vgneDv~glnf~af~q~kttdit~~V~~~~ne~l~sl~vv~yKs~nddspv~sv~~--gql-~~ffp~l~~d 1052 (1165)
T KOG1948|consen 976 FPRSFTVSVGNEDVKGLNFMAFIQAKTTDITVEVGMDTNEELQSLRVVIYKSNNDDSPVASVVA--GQL-LHFFPNLPRD 1052 (1165)
T ss_pred CCceEEEEecccccCCceEEEEeccceEEEEEEEcccccccccceEEEEEecCCCCCcceEEec--cce-eeeccccCCC
Confidence 33333333322223333333222 112 22221111122222 23444555433222222222 222 33343 3568
Q ss_pred CcEEEEEEEEE
Q psy4956 155 GGSYQVQLFSV 165 (361)
Q Consensus 155 ~~~Y~v~v~a~ 165 (361)
|..|.+++.+.
T Consensus 1053 g~~yvV~l~St 1063 (1165)
T KOG1948|consen 1053 GVEYVVRLEST 1063 (1165)
T ss_pred CceEEEEEecc
Confidence 88998887664
|
|
| >KOG0613|consensus | Back alignment and domain information |
|---|
Probab=80.39 E-value=35 Score=34.72 Aligned_cols=244 Identities=12% Similarity=0.045 Sum_probs=113.1
Q ss_pred EEEecCCCCCC-CcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCC
Q psy4956 13 LVIKIPENLSS-DNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPD 91 (361)
Q Consensus 13 l~~~~p~~~~~-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~ 91 (361)
..|.+|....+ .+.+|+|+-+...+... -..+... ...-.+....+..+|.+.+.+.. ..+..........+.
T Consensus 158 ~~~~~~~~d~~~k~~~~iie~~~~g~s~~-~~~l~~~--~~~s~~~~a~~e~~v~~v~s~gq---p~~~~~~~~~g~~i~ 231 (1205)
T KOG0613|consen 158 PAWRPPREDGGRKREEYIIERRQAGRSPW-LKRLTQP--TDDSTDTDAHYESRVRAVVSAGQ---PEPLERWEILGELIA 231 (1205)
T ss_pred ccccCCccCccceeecceEEEEeccCCCc-ccccccc--cCCcceeccccceeEEEEEecCC---CccchhhhhcccccC
Confidence 34556654444 88899998877444322 2222222 22223333333344444443321 111111111112233
Q ss_pred CCCccEEEEEe---CCEEEEEeeCCCCCC----cccEEEEEEE-CCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 92 PPTNLSVNVRS---GKTAQIFWSPPISGK----YSGFKLKVIS-LSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 92 ~p~~l~~~~~~---~~~v~l~W~~p~~~~----~~~y~v~~~~-~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
+...+.+.... .--+.+.|..+. |+ +.+|.++-.. .++..+.-.-..+.... +.+...-.++..+.+.+.
T Consensus 232 ~~~~~~~s~t~e~s~~~i~~~l~~~~-G~~~~~~~~~l~e~~~~~~~~t~~i~~~~~~~~~-s~t~~~~~~~~q~~~~v~ 309 (1205)
T KOG0613|consen 232 PGSAPSMSVTLEASDRKIQLTLRAPR-GPYSAHILGYLIEQRKHKGGNTKTIQNDGPEPEL-SWTVADKRQGCQDRFKVT 309 (1205)
T ss_pred CCCccccccccchhheeeeEEeecCC-CchHHHHhcchhhhcccCCCccccccccCCcccc-ceeeecccCCcccceeee
Confidence 33333333322 345677787653 22 3455554332 11111111112222222 455555567778888888
Q ss_pred EEeCCCCccccee---eeeccCC----CCCcceEEEeccCCeEEEEeecCCC--CCcceEEEEEEeCCCCCCceeEEeec
Q psy4956 164 SVYDSKESVAYTS---RNFTTKP----NTPGKFIVWFRNETTLLVLWQPSYP--ASIYTHYKVSIDPPDAPESVLYVEKE 234 (361)
Q Consensus 164 a~~~~~~s~~~~~---~~~~t~p----~~p~~l~~~~~~~~~~~v~W~~~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~ 234 (361)
..-..+.+.+... ..+...| .-+.++.+.....+.+.+.|.-... +..+.+|+..-....+.........
T Consensus 310 ~~~~i~~~~~~p~~~~~aaa~~~~~~v~~~~~~~v~a~d~~~v~m~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~- 388 (1205)
T KOG0613|consen 310 EEAPIGKGKPGPESLQAAAARPPEVPVGLVRNLSVTARDNTLVEMPTALSGTQKPDEAQGYHGEEVSSESLGALPCPVG- 388 (1205)
T ss_pred EEeeccccccCchhhhhhccCCccccccccccceeccccCcceeecccccCCcCCchheeecccccccccccccccccc-
Confidence 7765555432111 1111222 2234556666666778888854311 1223444443222222211111111
Q ss_pred cCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCC
Q psy4956 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267 (361)
Q Consensus 235 ~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s 267 (361)
........+.++.++..|..++.|.|..|..
T Consensus 389 --~~ts~~~~~~~~~~~e~~~~~~~a~n~~g~~ 419 (1205)
T KOG0613|consen 389 --TVTSHTYTIKDAGPGEGYFTRVPAVNKGGTE 419 (1205)
T ss_pred --cccCcchhhhhcCcccccccccceeccCCcc
Confidence 1123456778899999999999999876654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 361 | ||||
| 1tdq_A | 283 | Structural Basis For The Interactions Between Tenas | 4e-09 | ||
| 3t1w_A | 375 | Structure Of The Four-Domain Fragment Fn7b89 Of Onc | 6e-09 | ||
| 1fnf_A | 368 | Fragment Of Human Fibronectin Encompassing Type-Iii | 3e-07 | ||
| 4gh7_B | 285 | Crystal Structure Of Anticalin N7a In Complex With | 2e-06 | ||
| 2gee_A | 203 | Crystal Structure Of Human Type Iii Fibronectin Ext | 7e-06 | ||
| 1fnh_A | 271 | Crystal Structure Of Heparin And Integrin Binding S | 3e-05 | ||
| 3r8q_A | 290 | Structure Of Fibronectin Domain 12-14 Length = 290 | 4e-05 | ||
| 1qr4_A | 186 | Two Fibronectin Type-Iii Domain Segment From Chicke | 1e-04 |
| >pdb|1TDQ|A Chain A, Structural Basis For The Interactions Between Tenascins And The C-Type Lectin Domains From Lecticans: Evidence For A Cross-Linking Role For Tenascins Length = 283 | Back alignment and structure |
|
| >pdb|3T1W|A Chain A, Structure Of The Four-Domain Fragment Fn7b89 Of Oncofetal Fibronectin Length = 375 | Back alignment and structure |
|
| >pdb|1FNF|A Chain A, Fragment Of Human Fibronectin Encompassing Type-Iii Repeats 7 Through 10 Length = 368 | Back alignment and structure |
|
| >pdb|4GH7|B Chain B, Crystal Structure Of Anticalin N7a In Complex With Oncofetal Fibronectin Fragment Fn7b8 Length = 285 | Back alignment and structure |
|
| >pdb|2GEE|A Chain A, Crystal Structure Of Human Type Iii Fibronectin Extradomain B And Domain 8 Length = 203 | Back alignment and structure |
|
| >pdb|1FNH|A Chain A, Crystal Structure Of Heparin And Integrin Binding Segment Of Human Fibronectin Length = 271 | Back alignment and structure |
|
| >pdb|3R8Q|A Chain A, Structure Of Fibronectin Domain 12-14 Length = 290 | Back alignment and structure |
|
| >pdb|1QR4|A Chain A, Two Fibronectin Type-Iii Domain Segment From Chicken Tenascin Length = 186 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283 | Back alignment and structure |
|---|
Score = 141 bits (356), Expect = 1e-39
Identities = 65/277 (23%), Positives = 102/277 (36%), Gaps = 14/277 (5%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
D PT + V S A + W+PP K LK + +
Sbjct: 8 GGGGIPVIDGPTQILVRDVSDTVAFVEWTPP-RAKVDFILLKYGLVGGEGGKTTFRLQPP 66
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
YS++ L PG Y+V + +V + ES A +S FTT+ + P V R T+L +
Sbjct: 67 LSQ-YSVQALRPGSRYEVSISAVRGTNESDA-SSTQFTTEIDAPKNLRVGSRTATSLDLE 124
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W + YKV + + +G P + LVPG Y + + V
Sbjct: 125 WDN--SEAEAQEYKVVYSTLAGEQYHEVLVPKGIGP-TTKTTLTDLVPGTEYGVGISAVM 181
Query: 263 EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPG 322
+ S P T RT P + + S+ ++W G D Y+++
Sbjct: 182 NSKQSIPATMNARTELDSPRDLMVT--ASSETSISLIWTKASG--PIDHYRIT--FTPSS 235
Query: 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
S+ +T RD + LEPG Y + + G
Sbjct: 236 GISSEVTVPRDRTSYTL--TDLEPGAEYIISITAERG 270
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 3e-27
Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 14/257 (5%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWL 80
+ L Y G T + PG++Y+ + + D
Sbjct: 39 RAKVDFILLKYGLVGGEGGKTTFRLQPP-LSQYSVQALRPGSRYEVSISAVRGTNESDAS 97
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLS-EKTPPRIIGF 139
+ TT D P NL V R+ + + W + +K+ +L+ E+ ++
Sbjct: 98 S--TQFTTEIDAPKNLRVGSRTATSLDLEWDNS-EAEAQEYKVVYSTLAGEQYHEVLVPK 154
Query: 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTL 199
P +L DL PG Y V + +V +SK+S+ + N T+ ++P +V +ET++
Sbjct: 155 GIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIP-ATMNARTELDSPRDLMVTASSETSI 213
Query: 200 LVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
++W + HY+++ P S + V P L PG Y IS+
Sbjct: 214 SLIWTK--ASGPIDHYRITFTPSSGISSEVTV-----PRDRTSYTLTDLEPGAEYIISIT 266
Query: 260 TVSEDEISTPTTAQYRT 276
+ S +T T
Sbjct: 267 AERGRQQSLESTVDAFT 283
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368 | Back alignment and structure |
|---|
Score = 136 bits (343), Expect = 5e-37
Identities = 57/273 (20%), Positives = 96/273 (35%), Gaps = 12/273 (4%)
Query: 89 PPDPPTNLSVNVRSGKTA-QIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P PPTNL + + W + +G+++ + + + +
Sbjct: 1 PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSC 60
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
+ +L+PG Y V +++V D KESV + P T+ V W P
Sbjct: 61 TFDNLSPGLEYNVSVYTVKDDKESVPISDT-IIPAVPPPTDLRFTNIGPDTMRVTWAPPP 119
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267
+ T++ V P E V + P L+PG Y +SV +V E S
Sbjct: 120 SIDL-TNFLVRYSPVKNEEDVAELSI---SPSDNAVVLTNLLPGTEYVVSVSSVYEQHES 175
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
TP + +T P + IT+NS V W P+ Y++ +
Sbjct: 176 TPLRGRQKTGLDSPTGIDFS--DITANSFTVHWIAPRA--TITGYRIRHHPEHFSGRPRE 231
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ L PG Y V + ++G+
Sbjct: 232 DRVPHSR-NSITL-TNLTPGTEYVVSIVALNGR 262
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 5e-31
Identities = 68/340 (20%), Positives = 125/340 (36%), Gaps = 16/340 (4%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
+ D + YR+ P +G + V + + F PG +Y+ +Y + +
Sbjct: 28 TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDD-KESVP 86
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
+ +I PPT+L T ++ W+PP S + F ++ + + + +
Sbjct: 87 ISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISP 146
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
+ A L +L PG Y V + SVY+ ES T ++P + V
Sbjct: 147 SDNA-VVLTNLLPGTEYVVSVSSVYEQHESTPLRG-RQKTGLDSPTGIDFSDITANSFTV 204
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W P + T Y++ P P L PG Y +S+ +
Sbjct: 205 HWIA--PRATITGYRIRHHPEHFSGRPREDRV---PHSRNSITLTNLTPGTEYVVSIVAL 259
Query: 262 SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP 321
+ E S Q T+ P + T SL + W+ P Y+++
Sbjct: 260 NGREESPLLIGQQSTVSDVPRDLEVV--AATPTSLLISWDAPAV--TVRYYRITY---GE 312
Query: 322 GASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
++P+ + ++ + GL+PG Y + V V+G+
Sbjct: 313 TGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGR 352
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 6e-21
Identities = 53/253 (20%), Positives = 92/253 (36%), Gaps = 14/253 (5%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
+ + Y P +S + + + LPGT+Y + H+
Sbjct: 126 FLVRYSPVKNEEDVAELSISPS-DNAVVLTNLLPGTEYVVSVSSVYE-QHESTPLRGRQK 183
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T D PT + + + + + W P +G++++ PR + +
Sbjct: 184 TGLDSPTGIDFSDITANSFTVHWIAP-RATITGYRIRHHPEHFSGRPREDRVPHSRNS-I 241
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
+L +LTPG Y V + ++ +ES +T + P V T+LL+ W
Sbjct: 242 TLTNLTPGTEYVVSIVALNGREESPL-LIGQQSTVSDVPRDLEVVAATPTSLLISWDA-- 298
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED--- 264
PA +Y+++ V P + A GL PG Y I+V V+
Sbjct: 299 PAVTVRYYRITYGETGGNSPVQEFTV---PGSKSTATISGLKPGVDYTITVYAVTGRGDS 355
Query: 265 -EISTPTTAQYRT 276
S P + YRT
Sbjct: 356 PASSKPISINYRT 368
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 5e-32
Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 15/340 (4%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
+ D + YR+ P +G + V + + F PG +Y+ +Y +
Sbjct: 29 TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKES-VP 87
Query: 82 WTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
+ +I T+LS + + + W+P S G+++ V++ E P F +
Sbjct: 88 ISDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-FVD 146
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
+ Y++ L PG Y + + ++ + ES A T+ T P T+ V
Sbjct: 147 SSVGYYTVTGLEPGIDYDISVITLINGGES-APTTLTQQTAVPPPTDLRFTNIGPDTMRV 205
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W P P+ T++ V P E V + P L+PG Y +SV +V
Sbjct: 206 TWAPP-PSIDLTNFLVRYSPVKNEEDVAELSI---SPSDNAVVLTNLLPGTEYVVSVSSV 261
Query: 262 SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP 321
E STP + +T P + IT+NS V W P+ Y++ P
Sbjct: 262 YEQHESTPLRGRQKTGLDSPTGIDFS--DITANSFTVHWIAPRA--TITGYRIRH---HP 314
Query: 322 GASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVKTVSGK 360
S + R ++ ++ L PG Y V + ++G+
Sbjct: 315 EHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGR 354
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 9e-32
Identities = 53/274 (19%), Positives = 102/274 (37%), Gaps = 11/274 (4%)
Query: 89 PPDPPTNLSVNVRSGKTA-QIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P PPTNL + + W + +G+++ + + + +
Sbjct: 2 PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSC 61
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207
+ +L+PG Y V +++V D KESV + + ++++ + W P
Sbjct: 62 TFDNLSPGLEYNVSVYTVKDDKESVPISDT-IIPEVPQLTDLSFVDITDSSIGLRWTPLN 120
Query: 208 PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267
++I Y++++ + GL PG Y+ISV T+ S
Sbjct: 121 SSTI-IGYRITVVAAGEGIPIFEDFV---DSSVGYYTVTGLEPGIDYDISVITLINGGES 176
Query: 268 TPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP 327
PTT +T P + +I +++RV W PP + + V + +
Sbjct: 177 APTTLTQQTAVPPPTDLRFT--NIGPDTMRVTWAPPPS-IDLTNFLVRYSPVKNEEDVAE 233
Query: 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGKP 361
++ S + + L PG Y V V +V +
Sbjct: 234 LSISPSD-NAVVL-TNLLPGTEYVVSVSSVYEQH 265
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 7e-27
Identities = 54/255 (21%), Positives = 85/255 (33%), Gaps = 11/255 (4%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWLTWTASI 86
YR+ + A P +V + PG YD + N T T
Sbjct: 127 YRITVVAAGEGIPIFEDFVDSS-VGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQ-- 183
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T PPT+L T ++ W+PP S + F ++ + + + + + A
Sbjct: 184 QTAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNA- 242
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
L +L PG Y V + SVY+ ES R T ++P + V W
Sbjct: 243 VVLTNLLPGTEYVVSVSSVYEQHESTPLRGR-QKTGLDSPTGIDFSDITANSFTVHWIA- 300
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266
P + T Y++ P P L PG Y +S+ ++ E
Sbjct: 301 -PRATITGYRIRHHPEHFSGRPREDR---VPHSRNSITLTNLTPGTEYVVSIVALNGREE 356
Query: 267 STPTTAQYRTIPLRP 281
S Q T+
Sbjct: 357 SPLLIGQQSTVSAHH 371
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 6e-32
Identities = 54/275 (19%), Positives = 103/275 (37%), Gaps = 15/275 (5%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
PT+L + + W+PP + + +G++++V + P + I + +
Sbjct: 18 GPAIPAPTDLKFTQVTPTSLSAQWTPP-NVQLTGYRVRVTPKEKTGPMKEINLAPDSSS- 75
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTS-RNFTTKPNTPGKFIVWFRNETTLLVLWQP 205
+ L Y+V ++++ D+ S + P + V ETT+ + W+
Sbjct: 76 VVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRT 135
Query: 206 SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265
T ++V P + + + P GL PG Y I + T++++
Sbjct: 136 --KTETITGFQVDAVPANGQTPI----QRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNA 189
Query: 266 ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASS 325
S+P T P + + + T NSL V W+PP+ Y + +PG+
Sbjct: 190 RSSPVVIDASTAIDAPSNLRFL--ATTPNSLLVSWQPPRA--RITGYIIK--YEKPGSPP 243
Query: 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
+ GLEPG Y + V +
Sbjct: 244 REVVPRPRPGVTEATITGLEPGTEYTIYVIALKNN 278
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 6e-23
Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 11/256 (4%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVH-DWL 80
+ + YR+ P P ++ D ++ S + TKY+ +Y T+
Sbjct: 45 NVQLTGYRVRVTPKEKTGPMKEINLAPD-SSSVVVSGLMVATKYEVSVYALKDTLTSRPA 103
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFT 140
+ PP V + T I W + +GF++ + + +TP +
Sbjct: 104 QGVVTTLENVSPPRRARVTDATETTITISWRTK-TETITGFQVDAVPANGQTPIQRT--I 160
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200
+ Y++ L PG Y++ L+++ D+ S + + +T + P +LL
Sbjct: 161 KPDVRSYTITGLQPGTDYKIYLYTLNDNARS-SPVVIDASTAIDAPSNLRFLATTPNSLL 219
Query: 201 VLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
V WQP P + T Y + + P +P + PG +A GL PG Y I V
Sbjct: 220 VSWQP--PRARITGYIIKYEKPGSPPREVVPR---PRPGVTEATITGLEPGTEYTIYVIA 274
Query: 261 VSEDEISTPTTAQYRT 276
+ ++ S P + +T
Sbjct: 275 LKNNQKSEPLIGRKKT 290
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290 | Back alignment and structure |
|---|
Score = 74.4 bits (183), Expect = 3e-15
Identities = 37/203 (18%), Positives = 64/203 (31%), Gaps = 18/203 (8%)
Query: 163 FSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPP 222
+ + S P T+L W P P T Y+V + P
Sbjct: 1 MAHHHHHHSSGLEVLFQGPAIPAPTDLKFTQVTPTSLSAQWTP--PNVQLTGYRVRVTPK 58
Query: 223 DAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTI----P 278
+ + + P + GL+ Y +SV + + S P T+ P
Sbjct: 59 EKTGPMKEINL---APDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSP 115
Query: 279 LRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQC 338
R T T ++ + W +QV P TPI ++ +
Sbjct: 116 PRRARVT----DATETTITISWRTKTE--TITGFQVD---AVPANGQTPIQRTIKPDVRS 166
Query: 339 DMSEGLEPGRTYQVLVKTVSGKP 361
GL+PG Y++ + T++
Sbjct: 167 YTITGLQPGTDYKIYLYTLNDNA 189
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 3e-28
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 6/194 (3%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
PT+LS + + + W+P S G+++ V++ E P F ++
Sbjct: 16 PRGSHMEVPQPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-FVDS 74
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
Y++ L PG Y + +++V + ES T+ T P T+ V
Sbjct: 75 SVGYYTVTGLEPGIDYDISVYTVKNGGESTP-TTLTQQTAVPPPTDLRFTNIGPDTMRVT 133
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
W P P+ T++ V P E V + P L+PG Y +SV +V
Sbjct: 134 WAPP-PSIDLTNFLVRYSPVKNEEDVAELSI---SPSDNAVVLTNLLPGTEYVVSVSSVY 189
Query: 263 EDEISTPTTAQYRT 276
E STP + +T
Sbjct: 190 EQHESTPLRGRQKT 203
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203 | Back alignment and structure |
|---|
Score = 87.2 bits (216), Expect = 2e-20
Identities = 40/197 (20%), Positives = 72/197 (36%), Gaps = 9/197 (4%)
Query: 164 SVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPD 223
S + S R + P ++++ + W P +S Y++++
Sbjct: 4 SHHHHHHSSGLVPRGSHMEVPQPTDLSFVDITDSSIGLRWTPL-NSSTIIGYRITVVAAG 62
Query: 224 APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLS 283
+ ++ GL PG Y+ISV TV STPTT +T P
Sbjct: 63 EGIPI---FEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPPTD 119
Query: 284 FTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEG 343
+ +I +++RV W PP + + V + + ++ S + +
Sbjct: 120 LRFT--NIGPDTMRVTWAPPPS-IDLTNFLVRYSPVKNEEDVAELSISPSDNAV--VLTN 174
Query: 344 LEPGRTYQVLVKTVSGK 360
L PG Y V V +V +
Sbjct: 175 LLPGTEYVVSVSSVYEQ 191
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 3e-12
Identities = 40/160 (25%), Positives = 61/160 (38%), Gaps = 5/160 (3%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLY-YTNSTVHDWL 80
SS YR+ + A P +V + + PG YD +Y N
Sbjct: 48 SSTIIGYRITVVAAGEGIPIFEDFVDSSVG-YYTVTGLEPGIDYDISVYTVKNGGESTPT 106
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFT 140
T T T PPT+L T ++ W+PP S + F ++ + + + +
Sbjct: 107 TLTQ--QTAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSIS 164
Query: 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
+ A L +L PG Y V + SVY+ ES R T
Sbjct: 165 PSDNA-VVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKT 203
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 4e-28
Identities = 48/183 (26%), Positives = 71/183 (38%), Gaps = 14/183 (7%)
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
N T + P V ETTL + W+ P + + Y+++ P ++ + + P
Sbjct: 2 NAGTDLDNPKDLEVSDPTETTLSLRWRR--PVAKFDRYRLTYVSPSGKKNEMEI-----P 54
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLR 297
+GL G Y IS+ S PTT + T+ P ++ IT NS
Sbjct: 55 VDSTSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSPKGISFS--DITENSAT 112
Query: 298 VVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357
V W PP+ D Y+VS P TP + D L PG Y V + +V
Sbjct: 113 VSWTPPRS--RVDSYRVSY---VPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISV 167
Query: 358 SGK 360
G
Sbjct: 168 KGF 170
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186 | Back alignment and structure |
|---|
Score = 91.4 bits (227), Expect = 4e-22
Identities = 45/193 (23%), Positives = 70/193 (36%), Gaps = 13/193 (6%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T D P +L V+ + T + W P K+ ++L +S S K I
Sbjct: 4 GTDLDNPKDLEVSDPTETTLSLRWRRP-VAKFDRYRLTYVSPSGKKNEMEIPVDST---S 59
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
+ L+ L G Y + L + +S T+ +T +P E + V W P
Sbjct: 60 FILRGLDAGTEYTISLVAEKGRHKSKP-TTIKGSTVVGSPKGISFSDITENSATVSWTP- 117
Query: 207 YPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA-QAAFKGLVPGRAYNISVQTVSEDE 265
P S Y+VS P G + LVPG YN+++ +V E
Sbjct: 118 -PRSRVDSYRVSYVPITGGTP-----NVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFE 171
Query: 266 ISTPTTAQYRTIP 278
S P + +T
Sbjct: 172 ESEPISGILKTAL 184
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-09
Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 20/170 (11%)
Query: 22 SSDNSTYRLDYIPAHGH------PPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75
+ YRL Y+ G P +T+++ R + GT+Y L
Sbjct: 31 VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLD---------AGTEYTISLV-AEKG 80
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR 135
H T +T P +S + + +A + W+PP + +++ + ++ TP
Sbjct: 81 RHKSKPTTIKGSTVVGSPKGISFSDITENSATVSWTPP-RSRVDSYRVSYVPITGGTPNV 139
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
+ + L L PG Y V + SV +ES S T ++
Sbjct: 140 VT--VDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEP-ISGILKTALDS 186
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731 | Back alignment and structure |
|---|
Score = 72.9 bits (178), Expect = 3e-14
Identities = 52/326 (15%), Positives = 105/326 (32%), Gaps = 29/326 (8%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTASITT------PPDPPTNLSVNVRSGKTAQIFWSPPI 114
P T+Y+ + T + ++ T P P L V + I W P
Sbjct: 325 PDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFG 384
Query: 115 SGKYSGFKLKVI-------SLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167
+ E+ + TEN +++ +L+P + V+L +
Sbjct: 385 YNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNP 444
Query: 168 -----SKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDP 221
S+E + T + P + I E + + W+ P+ + T Y+++
Sbjct: 445 EGRKESQELIVQTDEDLPGAV--PTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKA 502
Query: 222 PDAPESVLYVEKEGE----PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT- 276
+ + + + + F GL PG Y+ +++ + P T Q+ T
Sbjct: 503 VSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTK 562
Query: 277 --IPLRPLSFTYDKASITSNSLRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITKSRD 333
P P + T N++ V+ +P + YQ+ + RP + +
Sbjct: 563 ISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKC 622
Query: 334 EPTQCDMSEGLEPGRTYQVLVKTVSG 359
P Y + +
Sbjct: 623 YPVPIHFQNASLLNSQYYFAAEFPAD 648
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 6e-09
Identities = 35/294 (11%), Positives = 75/294 (25%), Gaps = 21/294 (7%)
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
+ PP P + I + + + + + +
Sbjct: 258 VKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTS 317
Query: 146 GYSLKDLTPGGSY--QVQLFSVYDSKESVAYTSRNFTTKPNTPGK----FIVWFRNETTL 199
Y + L P Y V L + + TK P + V +
Sbjct: 318 -YKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQI 376
Query: 200 LVLWQPSYPAS---IYTHYKVS-IDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
+ W+P + V E V Q L P +
Sbjct: 377 TIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVS 436
Query: 256 ISVQTVSEDEISTPTTAQYRT---IPLRPLSFTYDKASITSNSLRVVWEPP-KGFSEFDK 311
+ + ++ + +T +P + + S + + W P + +
Sbjct: 437 VKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQG-STFEEKIFLQWREPTQTYGVITL 495
Query: 312 YQVSINVRRPGASSTPITKSRDEPTQCDMS-----EGLEPGRTYQVLVKTVSGK 360
Y+++ ++ ++ GL PG TY ++ + K
Sbjct: 496 YEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAK 549
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731 | Back alignment and structure |
|---|
Score = 50.9 bits (121), Expect = 4e-07
Identities = 42/291 (14%), Positives = 81/291 (27%), Gaps = 28/291 (9%)
Query: 18 PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDN---IEFSEGLPGTKYDFYLYYTNS 74
+ + Y G VS D +++ + P T L N
Sbjct: 385 YNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNP 444
Query: 75 TVHDWLTWTASIT---TPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLS 129
T P PT + + W P G + +++ ++S
Sbjct: 445 EGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVS 504
Query: 130 EKTPPRIIGFTENPPAG------YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183
P + + + L PG +Y + +K + FTTK
Sbjct: 505 SFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTI-RASTAKGFGPPATNQFTTKI 563
Query: 184 NTPG-----KFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
+ P + + T+ V+ + + + Y++ ++ + E
Sbjct: 564 SAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCY 623
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTA-------QYRTIPLRP 281
P P L+ + Y + + + P T Y PL P
Sbjct: 624 PVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLP 674
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680 | Back alignment and structure |
|---|
Score = 70.0 bits (170), Expect = 3e-13
Identities = 49/343 (14%), Positives = 89/343 (25%), Gaps = 56/343 (16%)
Query: 73 NSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKV------- 125
+ T P P L ++ WS + V
Sbjct: 144 GCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYG 203
Query: 126 ISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD------SKESVAYTSRNF 179
I SE + L D+ P YQ ++ +V + S + S
Sbjct: 204 IHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKD 263
Query: 180 TTKPNTPGKFIV-----WFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEK 233
+ P P + T+ ++W P P HYKV + +S++ +K
Sbjct: 264 PSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKK 323
Query: 234 EGE---PPGPAQAAFKGLVPGRAYNISVQTVS---------------------------- 262
+ + L P Y + +Q ++
Sbjct: 324 KRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQL 383
Query: 263 ---EDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVS--IN 317
R P RPL ++V W+ + ++Y V
Sbjct: 384 VKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTED-PTVNRYHVRWFPE 442
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ S + + L Y+V V+ + K
Sbjct: 443 ACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPK 485
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 4e-06
Identities = 55/434 (12%), Positives = 109/434 (25%), Gaps = 91/434 (20%)
Query: 18 PENLSSDNSTYRLDYIPAHG-HPPPNTTYVSRDIKDNIEFS---EGL-PGTKYDFYLYYT 72
N+S + Y + +G HP + + + + + P Y F +
Sbjct: 184 KFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAV 243
Query: 73 NST-VHDWLTWTASITTPPDP----------PTNLSVNVRSGKTAQIFWSPPIS--GKYS 119
N + + + DP N +VN T I W P
Sbjct: 244 NVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVH 303
Query: 120 GFKL--KVISLSEKTPPRIIGFTENPPAG---YSLKDLTPGGSYQVQLFSV--------- 165
+K+ + S+ P + L+ L P Y V+L ++
Sbjct: 304 HYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLK 363
Query: 166 -------YDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVS 218
+ S + + T+ + + R T + + KV
Sbjct: 364 SAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVY 423
Query: 219 IDPPDAPESVLYV---------EKEGEPPGPAQAA-------FKGLVPGRAYNISVQ--- 259
+ P Y + + L Y ++VQ
Sbjct: 424 WKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIR 483
Query: 260 -----TVSEDEISTP------------------TTAQYRTIPLRPLSFTYDKASITSN-S 295
+TP + +P + + N +
Sbjct: 484 PKSHSKAEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT 543
Query: 296 LRVVWEPPK--GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-------EGLEP 346
W+ K + +QV+ + + S +Q S L P
Sbjct: 544 GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRP 603
Query: 347 GRTYQVLVKTVSGK 360
Y++ V+ ++
Sbjct: 604 STLYRLEVQVLTPG 617
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201 | Back alignment and structure |
|---|
Score = 65.8 bits (160), Expect = 7e-13
Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 25/207 (12%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
+ P ++ + I W+ P S + L+ + + + Y
Sbjct: 1 SGP-VEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHL-NSY 58
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK------------------PNTPGKF 189
++K L PG Y+ QL S+ TT P
Sbjct: 59 TIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSE 118
Query: 190 IVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249
V ++ +V W + + ++V + + + Y++ P L+
Sbjct: 119 SVTEITASSFVVSWVS--ASDTVSGFRVEYELSEEGDEPQYLDL---PSTATSVNIPDLL 173
Query: 250 PGRAYNISVQTVSEDEISTPTTAQYRT 276
PGR Y ++V +SED + + +T
Sbjct: 174 PGRKYIVNVYQISEDGEQSLILSTSQT 200
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 3e-08
Identities = 32/181 (17%), Positives = 56/181 (30%), Gaps = 25/181 (13%)
Query: 196 ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
+ + W P+ I + Y + P ++ P KGL PG Y
Sbjct: 15 PNSHPIQWNAPQPSHI-SKYILRWRPKNSVGRWKEATI---PGHLNSYTIKGLKPGVVYE 70
Query: 256 ISVQTVSEDEISTPTTAQYRT----IPLRPLSFTYDKA-------------SITSNSLRV 298
+ ++ + T + T P+ + T + IT++S V
Sbjct: 71 GQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVV 130
Query: 299 VWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358
W ++V + G + T ++ L PGR Y V V +S
Sbjct: 131 SWVSASD--TVSGFRVEYELSEEGDEPQYLDLPSTA-TSVNIP-DLLPGRKYIVNVYQIS 186
Query: 359 G 359
Sbjct: 187 E 187
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 9e-06
Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 25/174 (14%)
Query: 28 YRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87
Y L + P + + ++ PG Y+ L H +T T
Sbjct: 33 YILRWRPKNSVGRWKEATIPGH-LNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 91
Query: 88 T------------------PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLS 129
T P T+ SV + + + W S SGF+++
Sbjct: 92 TSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA-SDTVSGFRVEYELSE 150
Query: 130 EKTPPRIIGFTENPPAG--YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
E P+ + + P ++ DL PG Y V ++ + + E S + TT
Sbjct: 151 EGDEPQYL---DLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 201
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A Length = 419 | Back alignment and structure |
|---|
Score = 68.1 bits (165), Expect = 8e-13
Identities = 52/376 (13%), Positives = 98/376 (26%), Gaps = 45/376 (11%)
Query: 18 PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDN-------IEFSEGLPGTKYDFYLY 70
+ L P + +S D+ + + +P +
Sbjct: 25 DTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDV 84
Query: 71 Y-----TNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPP--------ISGK 117
+ + LT T + P P +L ++ + WS +S
Sbjct: 85 DYFSFQPDRPLGTRLTVTLTQHVQPPEPRDLQISTDQD-HFLLTWSVALGSPQSHWLSPG 143
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQL---------FSVYDS 168
F++ L + I + A + L P +Y ++ S S
Sbjct: 144 DLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPS 203
Query: 169 KESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPES 227
K S + P +F L W+ + + + P PDA +
Sbjct: 204 KWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSA 263
Query: 228 VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYD 287
VL E+E P ++ + V + + +
Sbjct: 264 VLLREEECSP----VLREGLGSLHTRHHCQI-PVPDPATHGQYIVSVQPRRAEKHIKSSV 318
Query: 288 ---------KASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQC 338
+ + +S + WE K E + I R+ A+ +
Sbjct: 319 NIQMAPPSLQVTKDGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAHS 378
Query: 339 DMSEGLEPGRTYQVLV 354
LEP Y V
Sbjct: 379 MALPALEPSTRYWARV 394
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589 | Back alignment and structure |
|---|
Score = 66.6 bits (162), Expect = 3e-12
Identities = 46/360 (12%), Positives = 100/360 (27%), Gaps = 40/360 (11%)
Query: 27 TYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTN---STVHDWLTWT 83
+ L A +++S + + ++ N D + +
Sbjct: 134 NFTLKSEWATHKFADCKAKRDTPTSCTVDYST-VYFVNIEVWVEAENALGKVTSDHINFD 192
Query: 84 ASITTPPDPPTNLSVNVRSGK--TAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTE 141
P+PP NLSV ++ W+ P K + ++ E
Sbjct: 193 PVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE 252
Query: 142 NPPAG---YSLKDLTPGGSYQVQLFSVYD---SKESVAYTSRNFTTKPNTPGKFIVWFR- 194
+ + ++++DL P Y ++ + + S + T + P K ++
Sbjct: 253 DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYK 312
Query: 195 -------NETTLLVLWQP---SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAA 244
T+ ++W+ Y+V++ + V
Sbjct: 313 IDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVN---------ATK 363
Query: 245 FKGLVPGRAYNISVQTVSED---EISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWE 301
+ Y ++ + + + T P+ KA N L V W
Sbjct: 364 LTVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDL--KAFPKDNMLWVEWT 421
Query: 302 PPKGFSEFDKYQVS-INVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
P+ KY + + T + + + L + Y + V V
Sbjct: 422 TPRE--SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYAD 479
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589 | Back alignment and structure |
|---|
Score = 62.7 bits (152), Expect = 5e-11
Identities = 49/322 (15%), Positives = 89/322 (27%), Gaps = 34/322 (10%)
Query: 63 TKYDFYLYYTNSTVHDWLTWTASITT----PPDPPTNLSVNVRSGKTAQIFWSPP-ISGK 117
+ L T IT PP+ P NLS V GK + W +
Sbjct: 72 ASLNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL 131
Query: 118 YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSY--QVQLFSVYDSKESVAYT 175
+ F LK + K + P + + V+ + S
Sbjct: 132 ETNFTLKSEWATHKFAD-CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHIN 190
Query: 176 SRNF-TTKPNTPGKFIVWFRNETTLLVLWQ---PSYPASIYTHYKVSIDPPDAPESVLYV 231
KPN P V E + ++ PS + I Y + DA +
Sbjct: 191 FDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWS-QI 249
Query: 232 EKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT----TAQYRTIPLRP------ 281
E + + L P Y ++ + ED + A T RP
Sbjct: 250 PPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSF 309
Query: 282 LSFTYDKASITSNSLRVVWEPPKGF---SEFDKYQVSINVRRPGASSTPITKSRDEPTQC 338
+ ++++VW+ F + Y+V++ + + + ++
Sbjct: 310 WYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKL----- 364
Query: 339 DMSEGLEPGRTYQVLVKTVSGK 360
Y + +
Sbjct: 365 ---TVNLTNDRYLATLTVRNLV 383
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589 | Back alignment and structure |
|---|
Score = 58.1 bits (140), Expect = 2e-09
Identities = 56/363 (15%), Positives = 94/363 (25%), Gaps = 41/363 (11%)
Query: 18 PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-PGTKYDFYLYYTNSTV 76
P S Y + Y + + L P T+Y F +
Sbjct: 224 PSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG 283
Query: 77 HD-WLTWT--ASITTPPDPPTNLSVNVR--------SGKTAQIFWSPPISGKYSGFKLK- 124
W W+ AS T D P+ +T Q+ W + +G L
Sbjct: 284 KGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDY 343
Query: 125 VISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF---SVYDSKESVAYTSRNFTT 181
++L+ L Y L V S +V
Sbjct: 344 EVTLTRWKSHL----QNYTVNATKLTVNLTNDRYLATLTVRNLVGKSDAAVLTIPAC-DF 398
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKV--SIDPPDAPESVLYVEKEGEPPG 239
+ P + F + L V W P Y + + AP + + E
Sbjct: 399 QATHPVMDLKAFPKDNMLWVEWTT--PRESVKKYILEWCVLSDKAPCITDWQQ---EDGT 453
Query: 240 PAQAAF-KGLVPGRAYNISVQTVSEDEISTPTTAQYRT---IPLRPLSFTYDKASITSNS 295
+ L + Y I+V V D +P + + P + + K + N
Sbjct: 454 VHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKK--VGKNE 511
Query: 296 LRVVWEPP---KGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ W+ Y + R + T+ +S L Y V
Sbjct: 512 AVLEWDQLPVDVQNGFIRNYTIFY---RTIIGNETAVNVDSSHTEYTLS-SLTSDTLYMV 567
Query: 353 LVK 355
+
Sbjct: 568 RMA 570
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 9e-09
Identities = 27/268 (10%), Positives = 60/268 (22%), Gaps = 22/268 (8%)
Query: 18 PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNS--T 75
P + Y + H T + + + L +Y L N
Sbjct: 333 PFEANGKILDYEVTLTRWKSHLQNYTV-------NATKLTVNLTNDRYLATLTVRNLVGK 385
Query: 76 VHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKL--KVISLSEKTP 133
+ + P + W+ P + L V+S
Sbjct: 386 SDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTP-RESVKKYILEWCVLSDKAPCI 444
Query: 134 PRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFT--TKPNTPGKFIV 191
Y +L Y + + VY + + + P+
Sbjct: 445 TDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRT 504
Query: 192 WFRNETTLLVLWQP---SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248
+ ++ W +Y + E+ + V + L
Sbjct: 505 KKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNV-----DSSHTEYTLSSL 559
Query: 249 VPGRAYNISVQTVSEDEISTPTTAQYRT 276
Y + + +++ + T
Sbjct: 560 TSDTLYMVRMAAYTDEGGKDGPEFTFTT 587
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897 | Back alignment and structure |
|---|
Score = 66.5 bits (161), Expect = 4e-12
Identities = 44/324 (13%), Positives = 93/324 (28%), Gaps = 32/324 (9%)
Query: 61 PGTKYDFYLYYTNSTVHDWLTWTA-----SITTP---PDPPTNLSVNVRSGKTAQIFWSP 112
P T+Y ++ + + T+ A + T P P + S + W P
Sbjct: 558 PWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKP 617
Query: 113 PIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170
P G + + + +E + + + P ++ S K
Sbjct: 618 PSDPNGNITHYLVFWERQAEDSELFELDYCLKGL-------KLPSRTWSPPFESEDSQKH 670
Query: 171 SVAYTSRNFTTKPNTPGKFIVWFR--NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV 228
+ + + + P + E++ ++ ++
Sbjct: 671 NQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGN 730
Query: 229 LYVEKEGEP----PGPAQAAFKGLVPGRAYNISVQTVSEDEI----STPTTAQYRTIPLR 280
+E P GL Y I +Q ++D S RT+P
Sbjct: 731 AGNNEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEA 790
Query: 281 P---LSFTYDKASITSNSLRVVWEPPKGF-SEFDKYQVSINVRRPGASSTPITKSRDEPT 336
+ +N + ++W+ PK Y+VS T+
Sbjct: 791 KADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALE 850
Query: 337 QCDMSEGLEPGR-TYQVLVKTVSG 359
+ GL PG + ++ +++G
Sbjct: 851 RGCRLRGLSPGNYSVRIRATSLAG 874
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 9e-12
Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 7/115 (6%)
Query: 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
++ P+ P + E ++ W+P P + Y + + P AP P
Sbjct: 4 GSSGPDGPTQLRALNLTEGFAVLHWKP--PQNPVDTYDIQVTAPGAPPLQAET-----PG 56
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITS 293
LV Y +V+ + +++P + + T P + + +
Sbjct: 57 SAVDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEAPRDLEAKEVTPSG 111
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 3e-11
Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
+S ++ PD PT L + A + W PP + I ++ P + T
Sbjct: 2 SSGSSGPDGPTQLRALNLTEGFAVLHWKPP-QNPVDTY---DIQVTAPGAPPLQAETPGS 57
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
Y L DL +Y + + + S FTT P
Sbjct: 58 AVDYPLHDLVLHTNYTATVRGLRGPNLTSP-ASITFTTGLEAP 99
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 1e-04
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 8/88 (9%)
Query: 272 AQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKS 331
+ + P P ++T + W+PP+ D Y + V PGA
Sbjct: 2 SSGSSGPDGPTQLRA--LNLTEGFAVLHWKPPQN--PVDTYDIQ--VTAPGAPPLQAETP 55
Query: 332 RDEPTQCDMSEGLEPGRTYQVLVKTVSG 359
+ L Y V+ + G
Sbjct: 56 GSA-VDYPLH-DLVLHTNYTATVRGLRG 81
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 3e-11
Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 17/229 (7%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYS 148
P N + + W PP SGK G+++K + + ++ P
Sbjct: 5 DLGAPQNPNAKAAGSRKIHFNWLPP-SGKPMGYRVKYWIQGDSESEAHLLDSKVP--SVE 61
Query: 149 LKDLTPGGSYQVQLF---SVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ- 204
L +L P Y++++ + + S + R P+ PG+ + T + W
Sbjct: 62 LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAE 121
Query: 205 PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ--AAFKGLVPGRAYNISVQ--- 259
P+ T Y+V + + K+ P + L + Y +V+
Sbjct: 122 PAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARN 181
Query: 260 TVSEDEISTPTTAQYRTIPLRPLS----FTYDKASITSNSLRVVWEPPK 304
T P RP+S S +
Sbjct: 182 GAGWGPEREAIINL-ATQPKRPMSIPIIPDIPIVDAQSGEDYDSFLMYS 229
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 4e-04
Identities = 29/178 (16%), Positives = 52/178 (29%), Gaps = 16/178 (8%)
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P + W P P+ Y+V ES ++ P
Sbjct: 9 PQNPNAKAAGSRKIHFNWLP--PSGKPMGYRVKYWIQGDSESEAHLLDSKVP----SVEL 62
Query: 246 KGLVPGRAYNISVQTVSED---EISTPTTAQ-YRTIPLRPLSFTYDKASITSNSLRVVWE 301
L P Y + V S+ + + ++ +P P ++ ++S ++ W
Sbjct: 63 TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFN--VVSSTVTQLSWA 120
Query: 302 PPKGF-SEFDKYQVSINVR--RPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLVK 355
P E Y+V + D P + E L + Y+ VK
Sbjct: 121 EPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVK 178
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-10
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
+S ++ PP+NL++ + + Q+ W+PP G+ + L S P + +
Sbjct: 2 SSGSSGRSPPSNLALASETPDSLQVSWTPP-LGRVLHYWLTYAPASGLGPEKSV-SVPGA 59
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
+ +L DL Y+V + ++Y + S A ++ T P+ P
Sbjct: 60 RSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQTACPSGP 102
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-07
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239
++ + P + +L V W P P HY ++ P V P
Sbjct: 5 SSGRSPPSNLALASETPDSLQVSWTP--PLGRVLHYWLTYAPASGLGPEKSVS---VPGA 59
Query: 240 PAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
+ L Y + V + S +A +T
Sbjct: 60 RSHVTLPDLQAATKYRVLVSAIYAAGRSEAVSATGQTACPSG 101
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 7e-10
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 180 TTKP-NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
++ P P + T+ + WQPS A THY V P E
Sbjct: 5 SSGPLPPPRALTLAAVTPRTVHLTWQPSAGA---THYLVRCSPASPKGEEEERE---VQV 58
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
G + GL PGR Y +SVQ++ E S + RT P
Sbjct: 59 GRPEVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSGP 101
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 6e-06
Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 4/104 (3%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
++ + P PP L++ + +T + W P + + ++ S K
Sbjct: 2 SSGSSGPLPPPRALTLAAVTPRTVHLTWQPS--AGATHYLVRCSPASPKGEEEEREVQVG 59
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
P L L PG Y+V + S+ + S A T + P
Sbjct: 60 RPE-VLLDGLEPGRDYEVSVQSLRGPEGSEA-RGIRARTPTSGP 101
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 4e-05
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
++T ++ + W+P G Y V + P P +GLEPGR
Sbjct: 19 AVTPRTVHLTWQPSAG---ATHYLVRCSPASPKGEEEEREVQVGRPEVLL--DGLEPGRD 73
Query: 350 YQVLVKTVSG 359
Y+V V+++ G
Sbjct: 74 YEVSVQSLRG 83
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 7e-10
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239
++ + P K V T+LL+ W +S +Y+++ +E P
Sbjct: 2 SSVSSVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP----VQEFTVPY 57
Query: 240 PAQAA-FKGLVPGRAYNISVQTV-----SEDEISTPTTAQYRT 276
+ A GL PG Y I+V + +P + YRT
Sbjct: 58 SSSTATISGLSPGVDYTITVYAWGEDSAGYMFMYSPISINYRT 100
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-06
Identities = 14/100 (14%), Positives = 35/100 (35%), Gaps = 2/100 (2%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
++ PT L V + + I W P+S +++ +P + +
Sbjct: 2 SSVSSVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFTVPYSSST 61
Query: 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT 185
++ L+PG Y + +++ + + + T
Sbjct: 62 -ATISGLSPGVDYTITVYAWGEDSAGYMFMYSPISINYRT 100
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101 | Back alignment and structure |
|---|
Score = 38.6 bits (90), Expect = 3e-04
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMS-EGLEPGR 348
+ T SL + W+ P S Y+++ ++P+ + + + GL PG
Sbjct: 15 AATPTSLLISWDAPMSSSSVYYYRITY---GETGGNSPVQEFTVPYSSSTATISGLSPGV 71
Query: 349 TYQVLVKTVSGK 360
Y + V
Sbjct: 72 DYTITVYAWGED 83
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* Length = 314 | Back alignment and structure |
|---|
Score = 58.4 bits (140), Expect = 9e-10
Identities = 47/288 (16%), Positives = 79/288 (27%), Gaps = 24/288 (8%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T P TNLSV+V + T W+PP + +K +I T
Sbjct: 1 TETQPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQDKKIAPETRR---- 56
Query: 147 YSLKDLTPGGSYQVQL-----FSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
L QV S S S + + + N + +
Sbjct: 57 SIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKC 116
Query: 202 LWQPSYPASIYTHYKVSIDP---PDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258
W P S T+Y + + + +++ +
Sbjct: 117 SWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQI 176
Query: 259 QTVSEDEISTPTTAQYR-TIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD-KYQVSI 316
P+ T ++P S ++ L V WE P+ F Y+V +
Sbjct: 177 MVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNLSFHNDDLYVQWENPQNFISRCLFYEVEV 236
Query: 317 NVRRPGASSTPITKSRD----------EPTQCDMSEGLEPGRTYQVLV 354
N + + + E T C M G+ P V +
Sbjct: 237 NNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRI 284
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 9e-10
Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 7/104 (6%)
Query: 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
+ ++ P T L+ W P Y +S P + + P
Sbjct: 3 SGSSGLEAPRDLEAKEVTPRTALLTWTE--PPVRPAGYLLSFHTPGGQTQEILL-----P 55
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
G GL P +YN +Q + + P + + T LR
Sbjct: 56 GGITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLRI 99
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 5e-09
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
+S ++ + P +L + +TA + W+ P + +G+ L + +T ++
Sbjct: 2 SSGSSGLEAPRDLEAKEVTPRTALLTWTEP-PVRPAGYLLSFHTPGGQTQEILLPGGITS 60
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183
+ L L P SY +L +++ S +FTT
Sbjct: 61 ---HQLLGLFPSTSYNARLQAMWGQSLL-PPVSTSFTTGG 96
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 5e-09
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYS 148
D P+ + V + TA I W PP S GF+L I TE+ YS
Sbjct: 2 RLDAPSQIEVKDVTDTTALITWMPP-SQPVDGFELTYGIKDVPGDRTTIDLTEDENQ-YS 59
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
+ +L P Y+V L S S FTT
Sbjct: 60 IGNLKPDTEYEVSLISRRGDMSSNP-AKETFTTGLAAA 96
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-06
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241
+ + P + V +TT L+ W P P+ ++++ D P ++
Sbjct: 2 RLDAPSQIEVKDVTDTTALITWMP--PSQPVDGFELTYGIKDVPGDRTTID---LTEDEN 56
Query: 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT 276
Q + L P Y +S+ + D S P + T
Sbjct: 57 QYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTT 91
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-05
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+T + + W PP D ++++ ++ T I + DE Q + L+P
Sbjct: 13 DVTDTTALITWMPPSQ--PVDGFELTYGIKDVPGDRTTIDLTEDE-NQYSI-GNLKPDTE 68
Query: 350 YQVLVKTVSG 359
Y+V + + G
Sbjct: 69 YEVSLISRRG 78
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 2e-08
Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
D P L+ + +I W P G+ S +++ S + L+
Sbjct: 3 DRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRVTYSSPEDGIHELFPAPDGEEDT-AELQ 60
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183
L PG Y V + +++D ES T P
Sbjct: 61 GLRPGSEYTVSVVALHDDMESQPLIGTQSTAIP 93
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 3e-07
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 195 NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
+ ++ + W+ P + Y+V+ P+ L+ A +GL PG Y
Sbjct: 14 DVDSIKIAWES--PQGQVSRYRVTYSSPEDGIHELFPA---PDGEEDTAELQGLRPGSEY 68
Query: 255 NISVQTVSEDEISTPTTAQYRT 276
+SV + +D S P T
Sbjct: 69 TVSVVALHDDMESQPLIGTQST 90
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 4e-05
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+ +S+++ WE P+G + +Y+V+ + G +E ++ +GL PG
Sbjct: 12 DVDVDSIKIAWESPQG--QVSRYRVTYSSPEDGIHELFPAPDGEE-DTAEL-QGLRPGSE 67
Query: 350 YQVLVKTVSG 359
Y V V +
Sbjct: 68 YTVSVVALHD 77
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-08
Identities = 31/182 (17%), Positives = 52/182 (28%), Gaps = 12/182 (6%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLK---VISLSEKTPPRIIGFTENPPA 145
P PP + ++ S T +I W+ K+ + P N
Sbjct: 4 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 63
Query: 146 -GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPG------KFIVWFRNETT 198
Y + L P Y+ + + S + + TT P + T
Sbjct: 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKT 123
Query: 199 LLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
++V WQ PS T Y + E +V + + L Y
Sbjct: 124 IIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPV-VGNRLTHQIQELTLDTPYYFK 182
Query: 258 VQ 259
+Q
Sbjct: 183 IQ 184
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536 | Back alignment and structure |
|---|
Score = 52.9 bits (126), Expect = 8e-08
Identities = 39/215 (18%), Positives = 71/215 (33%), Gaps = 23/215 (10%)
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG------KYSGFKLKVISLSEKTPP 134
+ T PP P L+ ++ W+PP YS + S + P
Sbjct: 325 PASMPCTRPPSAPHYLTAVGMG-AKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGP 383
Query: 135 RIIGFTENPPAG------YSLKDLTPGGSYQVQLF---SVYDSKESVAYTSRNFTTKPNT 185
+ P ++ DL P +Y + V S ++ + + +
Sbjct: 384 CEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443
Query: 186 PGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAA 244
P K + R+ T+L V W P S Y+V+ S EG
Sbjct: 444 PPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRRTEGF-----SVT 498
Query: 245 FKGLVPGRAYNISVQTVSEDEISTPTTA-QYRTIP 278
L P Y + VQ ++++ + +++T+
Sbjct: 499 LDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 8e-08
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENP 143
+S ++ PP +L + S A++FW ++ +S +
Sbjct: 2 SSGSSGLAPPRHLGFSDVSHDAARVFWEGA-PRPVRLVRVTYVSSEGGHSGQTE--APGN 58
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
L L+ +Y V++ +Y S T TTK
Sbjct: 59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTG-RVTTKKAPS 100
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-05
Identities = 16/103 (15%), Positives = 28/103 (27%), Gaps = 8/103 (7%)
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239
++ P + V W+ +V+ + S + E PG
Sbjct: 5 SSGLAPPRHLGFSDVSHDAARVFWEG--APRPVRLVRVTYVSSEGGHS-----GQTEAPG 57
Query: 240 PA-QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
A A L Y + V + S+ T + T
Sbjct: 58 NATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPS 100
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 8e-08
Identities = 35/280 (12%), Positives = 73/280 (26%), Gaps = 26/280 (9%)
Query: 87 TTPPDPPTNL-SVNVRSGKTAQIFWSPPISGKYSGFKLK-VISLSEKTPPRIIGFTENPP 144
+ P + + + +T Q+ W + +G L ++L+
Sbjct: 5 SKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHL----QNYTV 60
Query: 145 AGYSLKDLTPGGSYQVQLF---SVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLV 201
L Y L V S +V T + P + F + L V
Sbjct: 61 NATKLTVNLTNDRYLATLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFPKDNMLWV 119
Query: 202 LWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261
W P Y + + ++ + L + Y I+V V
Sbjct: 120 EWTT--PRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPV 177
Query: 262 SEDEISTPTTAQYRT---IPLRPLSFTYDKASITSNSLRVVWEPP---KGFSEFDKYQVS 315
D +P + + P + + + N + W+ Y +
Sbjct: 178 YADGPGSPESIKAYLKQAPPSKGPTVRTK--KVGKNEAVLEWDQLPVDVQNGFIRNYTIF 235
Query: 316 INVRRPGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLV 354
++ + + + + L Y V +
Sbjct: 236 YRTIIGNETAVNVD-----SSHTEYTLSSLTSDTLYMVRM 270
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A Length = 290 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 25/172 (14%), Positives = 44/172 (25%), Gaps = 16/172 (9%)
Query: 194 RNETTLLVLWQPSYPA---SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVP 250
+ T+ ++W+ P Y+V++ + V +
Sbjct: 20 QGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVN---------ATKLTVNLT 70
Query: 251 GRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYD-KASITSNSLRVVWEPPKGFSEF 309
Y ++ + S + D KA N L V W P+
Sbjct: 71 NDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRE--SV 128
Query: 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDM-SEGLEPGRTYQVLVKTVSGK 360
KY + V A + D L + Y + V V
Sbjct: 129 KKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYAD 180
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 9e-08
Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 5/96 (5%)
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P +V E +L + W P + + + + + + + P
Sbjct: 5 PKNLVVSEVTEDSLRLSWTA--PDAAFDSFMIQYQESEKVGEAINLT---VPGSERSYDL 59
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
GL PG Y +S+ V S P +A++ T
Sbjct: 60 TGLKPGTEYTVSIYGVKGGHRSNPLSAEFTTGGHHH 95
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-05
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
P NL V+ + + ++ W+ P + F ++ + + + + Y L
Sbjct: 3 PAPKNLVVSEVTEDSLRLSWTAP-DAAFDSFMIQYQESEKVGEAINLTVPGSERS-YDLT 60
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
L PG Y V ++ V S S FTT +
Sbjct: 61 GLKPGTEYTVSIYGVKGGHRSNP-LSAEFTTGGHHH 95
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 2e-04
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+T +SLR+ W P FD + + + +T E D++ GL+PG
Sbjct: 12 EVTEDSLRLSWTAPDA--AFDSFMIQYQESEKVGEAINLTVPGSE-RSYDLT-GLKPGTE 67
Query: 350 YQVLVKTVSG 359
Y V + V G
Sbjct: 68 YTVSIYGVKG 77
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-07
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P V +T++ V W P P++ T Y+++ P + P + PP
Sbjct: 5 PTDLQVTNVTDTSITVSWTP--PSATITGYRITYTPSNGPGEPKELT---VPPSSTSVTI 59
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
GL PG Y +SV + +++ S P T
Sbjct: 60 TGLTPGVEYVVSVYALKDNQESPPLVGTQTTGGHHH 95
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-06
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG---Y 147
D PT+L V + + + W+PP S +G+++ + P+ + P
Sbjct: 3 DAPTDLQVTNVTDTSITVSWTPP-SATITGYRITYTPSNGPGEPKEL----TVPPSSTSV 57
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
++ LTPG Y V ++++ D++ES T +
Sbjct: 58 TITGLTPGVEYVVSVYALKDNQESPPLVGTQTTGGHHHH 96
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98 | Back alignment and structure |
|---|
Score = 37.8 bits (88), Expect = 6e-04
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
++T S+ V W PP Y+++ +T T ++ GL PG
Sbjct: 12 NVTDTSITVSWTPPSA--TITGYRITYTPSNGPGEPKELTVPPSS-TSVTIT-GLTPGVE 67
Query: 350 YQVLVKTVSG 359
Y V V +
Sbjct: 68 YVVSVYALKD 77
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 2e-07
Identities = 42/326 (12%), Positives = 95/326 (29%), Gaps = 38/326 (11%)
Query: 53 NIEFSEGLPGTKYDFYLYYTNSTVH-----DWLTWTASITTPPDPPTNL-----SVNVRS 102
+ L + + +H +W W+ P + +
Sbjct: 153 SWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILV 212
Query: 103 GKTAQ---IFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQ 159
G + +S +I L + +++++ S
Sbjct: 213 GSDITFCCVSQEKVLSALIGHTNCPLIHLDGEN------------VAIKIRNISVSASSG 260
Query: 160 VQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVS- 218
+ + +++ T P+TP + + ++ W P ++ S
Sbjct: 261 TNVVFTTE--DNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSY 318
Query: 219 -IDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT---TAQY 274
+ + + V E Q F+ L YN ++ + S T
Sbjct: 319 TLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVNITE 378
Query: 275 RTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD-KYQVSINVRRPGASSTPITKSRD 333
+ P P SF I S ++++ W P F++ + ++ I +T
Sbjct: 379 KVYPHTPTSFKVK--DINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNVTIQGV 436
Query: 334 EPTQCDMS-EGLEPGRTY--QVLVKT 356
E + ++ + L P Y ++ T
Sbjct: 437 ENSSYLVALDKLNPYTLYTFRIRCST 462
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} Length = 483 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 1e-06
Identities = 22/147 (14%), Positives = 44/147 (29%), Gaps = 6/147 (4%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
++Y L + + + + F Y+F L N T
Sbjct: 312 GPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQST 371
Query: 82 WTASIT--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG--FKLKVISLSEKTPPRII 137
+IT P PT+ V + ++ W P + ++++ + R +
Sbjct: 372 ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNV 431
Query: 138 GFTENPPAGYS--LKDLTPGGSYQVQL 162
+ Y L L P Y ++
Sbjct: 432 TIQGVENSSYLVALDKLNPYTLYTFRI 458
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 2e-07
Identities = 27/125 (21%), Positives = 41/125 (32%), Gaps = 10/125 (8%)
Query: 156 GSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHY 215
+ D + + + P K V T+LL+ W PA +Y
Sbjct: 3 HHHHHHSSDYKDDDDK-GENLYFQGSVSDVPTKLEVVAATPTSLLISWDA--PAVTVRYY 59
Query: 216 KVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS----EDEISTPTT 271
+++ V P + A GL PG Y I+V V+ S P +
Sbjct: 60 RITYGETGGNSPVQEFT---VPGSKSTATISGLKPGVDYTITVYAVTGLRLMLAGSKPIS 116
Query: 272 AQYRT 276
YRT
Sbjct: 117 INYRT 121
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-06
Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
+ D PT L V + + I W P + +++ +P + +
Sbjct: 26 GSVSDVPTKLEVVAATPTSLLISWDAP-AVTVRYYRITYGETGGNSPVQEF-TVPGSKST 83
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYT---SRNFTT 181
++ L PG Y + +++V + +A + S N+ T
Sbjct: 84 ATISGLKPGVDYTITVYAVTGLRLMLAGSKPISINYRT 121
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-05
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 6/107 (5%)
Query: 254 YNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQ 313
++ +D+ ++ P + T SL + W+ P Y+
Sbjct: 5 HHHHSSDYKDDDDKGENLYFQGSVSDVPTKLEVV--AATPTSLLISWDAPAV--TVRYYR 60
Query: 314 VSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ + T + + +S GL+PG Y + V V+G
Sbjct: 61 ITYGETGGNSPVQEFTVPGSK-STATIS-GLKPGVDYTITVYAVTGL 105
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 7e-07
Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 21/200 (10%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPA-G 146
P PP +L V + + + W PP+ S K ++ E T N
Sbjct: 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTS 63
Query: 147 YSLKDLTPGGSYQVQLF---SVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ + L G SY ++ + S + +P PGK + ++ + W
Sbjct: 64 WKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSW 123
Query: 204 QPSYPASIY----THYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ P Y V + + + + +A GL+ G Y+ V
Sbjct: 124 EK--PEHDGGSRILGYIVEMQTKGSDKWATCATVKVT-----EATITGLIQGEEYSFRVS 176
Query: 260 TVSED------EISTPTTAQ 273
+E ++S P A+
Sbjct: 177 AQNEKGISDPRQLSVPVIAK 196
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 36/186 (19%), Positives = 58/186 (31%), Gaps = 24/186 (12%)
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPESVLYVEKEGEP 237
P P V +T++ + W P + I +Y V
Sbjct: 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKI-KNYIVEKRESTRKAY----STVATN 58
Query: 238 PGPAQAAFKGLVPGRAYNISVQTVSED------EISTPTTAQYRTIPLRPLSFTYDKASI 291
L G +Y V +E E + A R +P ++ +
Sbjct: 59 CHKTSWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLM----DV 114
Query: 292 TSNSLRVVWEPPK--GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
T NS+ + WE P+ G S Y V + S T + + T+ ++ GL G
Sbjct: 115 TRNSVSLSWEKPEHDGGSRILGYIVE---MQTKGSDKWATCATVKVTEATIT-GLIQGEE 170
Query: 350 YQVLVK 355
Y V
Sbjct: 171 YSFRVS 176
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 1e-06
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 5/98 (5%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
++ PT L V + + I W S S +++ +P + +
Sbjct: 2 SSVSSVPTKLEVVAATPTSLLISWDAS-SSSVSYYRITYGETGGNSPVQEF-TVPGSSST 59
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYT---SRNFTT 181
++ L+PG Y + +++ Y + S N+ T
Sbjct: 60 ATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYRT 97
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-06
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239
++ + P K V T+LL+ W +S ++Y+++ V P
Sbjct: 2 SSVSSVPTKLEVVAATPTSLLISWDA--SSSSVSYYRITYGETGGNSPVQEFT---VPGS 56
Query: 240 PAQAAFKGLVPGRAYNISVQTVSE----DEISTPTTAQYRT 276
+ A GL PG Y I+V +P++ YRT
Sbjct: 57 SSTATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSINYRT 97
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 1e-06
Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
V ++ +V W + + ++V + + + Y++ P
Sbjct: 6 HLVATSESVTEITASSFVVSWVS--ASDTVSGFRVEYELSEEGDEPQYLD---LPSTATS 60
Query: 243 AAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT 276
L+PGR Y ++V +SED + + +T
Sbjct: 61 VNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQT 94
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 1e-05
Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
T+ SV + + + W S SGF+++ E P+ + +
Sbjct: 4 GSHLVATSESVTEITASSFVVSWVSA-SDTVSGFRVEYELSEEGDEPQYL-DLPSTATSV 61
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
++ DL PG Y V ++ + + E S + TT
Sbjct: 62 NIPDLLPGRKYIVNVYQISEDGEQSLILSTSQTT 95
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95 | Back alignment and structure |
|---|
Score = 37.5 bits (87), Expect = 6e-04
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
IT++S V W ++V + G + + L PGR
Sbjct: 16 EITASSFVVSWVSASD--TVSGFRVEYELSEEGDEPQYLDLPSTATSV--NIPDLLPGRK 71
Query: 350 YQVLVKTVSG 359
Y V V +S
Sbjct: 72 YIVNVYQISE 81
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-06
Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 23/188 (12%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISG--KYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
P+ P + ++ A+I W + ++ +
Sbjct: 5 VPNAPKLTGITCQA-DKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDS 63
Query: 147 YSLKDLTPGGSYQVQLFSVY------DSKESVAYTSRNFTTKPNT----PGKFIVWFRNE 196
+ ++P +Y F V S S S + TT+P+ P +
Sbjct: 64 SFVVQMSPWANYT---FRVIAFNKIGASPPSA--HSDSCTTQPDVPFKNPDNVVGQGTEP 118
Query: 197 TTLLVLWQP---SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRA 253
L++ W P + HY VS + +
Sbjct: 119 NNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAA--WENNNIFDWRQNNIVIADQPTFVK 176
Query: 254 YNISVQTV 261
Y I V +
Sbjct: 177 YLIKVVAI 184
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 2e-06
Identities = 33/201 (16%), Positives = 59/201 (29%), Gaps = 15/201 (7%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS---GKYSGFKLKVISLSEKTPPRIIGFTENPP 144
P P+ V S TAQ+ + P + +K + ++ E+ +
Sbjct: 7 DTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEAS 65
Query: 145 AG--YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNT----PGKFIVWFRNETT 198
++ L P +Y V+L ++ + F T+P P + +
Sbjct: 66 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNS 125
Query: 199 LLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257
+ V S HY V + P G K L Y +
Sbjct: 126 IKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRL----PSGSDHVMLKSLDWNAEYEVY 181
Query: 258 VQTVSEDEISTPTTAQYRTIP 278
V ++ S +RT
Sbjct: 182 VVAENQQGKSKAAHFVFRTAA 202
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 6e-05
Identities = 31/181 (17%), Positives = 54/181 (29%), Gaps = 10/181 (5%)
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQPSYP--ASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
P++P V + T + +P I YK E
Sbjct: 7 DTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPI-LKYKAEWRAVGEEVWHSKWYDAKEAS 65
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTA-QYRTIPLRPLSFTYD--KASITSNS 295
GL P Y + + ++ + + A +++T P+R S + NS
Sbjct: 66 MEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNS 125
Query: 296 LRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
++V G S Y V R + P + + L+ Y+V V
Sbjct: 126 IKVNLIKQDDGGSPIRHYLVRY--RALSSEWKPEIRLPSGSDHVMLK-SLDWNAEYEVYV 182
Query: 355 K 355
Sbjct: 183 V 183
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-06
Identities = 34/275 (12%), Positives = 72/275 (26%), Gaps = 13/275 (4%)
Query: 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLS-EKTPPRIIGFTENP 143
+P P L N + + + K + K II T +
Sbjct: 7 GYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASS 66
Query: 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLW 203
+ L + + F +++V + P P + W
Sbjct: 67 VTFTDIASLNIQLTCNILTFG--QLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEW 124
Query: 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF-KGLVPGRAYNISVQTVS 262
+ T++ + + + + + + P V + V+ +
Sbjct: 125 DGGRETHLETNFTLKSEWATHKFA----DCKAKRDTPTSCTVDYSTVYFVNIEVWVEAEN 180
Query: 263 EDEISTPT----TAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD-KYQVSIN 317
T Y+ P P + + + S+ L++ W P S KY +
Sbjct: 181 ALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYR 240
Query: 318 VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ S + + L+P Y
Sbjct: 241 TKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVF 275
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A Length = 303 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 6e-04
Identities = 41/229 (17%), Positives = 67/229 (29%), Gaps = 11/229 (4%)
Query: 39 PPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSV 98
P T ++R + + + T PP+ P NLS
Sbjct: 53 PKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLSC 112
Query: 99 NVRSGKTAQIFWSPP-ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGS 157
V GK + W + + F LK + K + P + +
Sbjct: 113 IVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-CKAKRDTPTSCTVDYSTVYFVN 171
Query: 158 YQVQLFSVYDSKESVAYTSRNFTT----KPNTPGKFIVWFRNET--TLLVLWQ-PSYPAS 210
+V + + ++ V NF KPN P V E L + W PS +
Sbjct: 172 IEVWVEAE-NALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSV 230
Query: 211 IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
I Y + DA + E + + L P Y ++
Sbjct: 231 IILKYNIQYRTKDASTWS-QIPPEDTASTRSSFTVQDLKPFTEYVFRIR 278
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 3e-06
Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 14/108 (12%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
+ P V T+LL+ W Y +Y+++ V P
Sbjct: 4 SDVPRDLEVVAATPTSLLISWDS--GRGSYQYYRITYGETGGNSPVQEFT---VPGPVHT 58
Query: 243 AAFKGLVPGRAYNISVQTVSED---------EISTPTTAQYRTIPLRP 281
A GL PG Y I+V V++ +P + YRT +P
Sbjct: 59 ATISGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKP 106
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 6e-05
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 10/105 (9%)
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSL 149
D P +L V + + I W G Y +++ +P + P ++
Sbjct: 4 SDVPRDLEVVAATPTSLLISWDSG-RGSYQYYRITYGETGGNSPVQEF-TVPGPVHTATI 61
Query: 150 KDLTPGGSYQVQLFSVYDSKESVAY--------TSRNFTTKPNTP 186
L PG Y + +++V D K S N+ T+ + P
Sbjct: 62 SGLKPGVDYTITVYAVTDHKPHADGPHTYHESPISINYRTEIDKP 106
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114 | Back alignment and structure |
|---|
Score = 39.1 bits (91), Expect = 3e-04
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+ T SL + W+ +G + Y+++ + T + GL+PG
Sbjct: 14 AATPTSLLISWDSGRG--SYQYYRITYGETGGNSPVQEFTVPGPV-HTATI-SGLKPGVD 69
Query: 350 YQVLVKTVSG 359
Y + V V+
Sbjct: 70 YTITVYAVTD 79
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* Length = 414 | Back alignment and structure |
|---|
Score = 47.7 bits (112), Expect = 3e-06
Identities = 50/367 (13%), Positives = 97/367 (26%), Gaps = 27/367 (7%)
Query: 18 PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL--PGTKYDFYLYYTNST 75
+ S N T+ DY + FS + +
Sbjct: 29 RSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKEN 88
Query: 76 VHDW---LTWTASITTPPDPPTNLSVNVRSGKTA-QIFWSPPISGKYS----GFKLKVIS 127
W ++T PP V++ + A I SP G
Sbjct: 89 TSSWYEVDSFTPFRKAQIGPP---EVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSL 145
Query: 128 LSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD-----SKESVAYTSRNFTTK 182
+ K + EN + + + L+P +Y +++ + S + +
Sbjct: 146 VIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVEN 205
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
P + I ++ W +Y + + P + LY K+ +
Sbjct: 206 ELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVK 265
Query: 243 AAF----KGLVPGRAYNISVQTVSEDEISTPTTAQY-RTIPLRPLSFTYDKASITSNSLR 297
+ + Y + VQ + S + T L S+S
Sbjct: 266 TTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFH 325
Query: 298 VVWEPPK---GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ PK Y + + +S K ++ T L+P Y V
Sbjct: 326 IYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDV-TVPNLKPLTVYCVKA 384
Query: 355 KTVSGKP 361
+ +
Sbjct: 385 RAHTMDE 391
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 8/198 (4%)
Query: 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR-IIGFTENPP 144
+ P P + + S TA++ ++ P S + + E I +
Sbjct: 192 LADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQ 251
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPG---KFIVWFRNETTLLV 201
L +L P +Y++++ +V + F T P + + +
Sbjct: 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKL 311
Query: 202 LWQP-SYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260
+ Y V D + L + +G + L Y + +
Sbjct: 312 SITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKD---HIILEHLQWTMGYEVQITA 368
Query: 261 VSEDEISTPTTAQYRTIP 278
+ S PT ++ P
Sbjct: 369 ANRLGYSEPTVYEFSMPP 386
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A Length = 389 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 29/206 (14%), Positives = 62/206 (30%), Gaps = 15/206 (7%)
Query: 156 GSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYT 213
G Y + ++ + P++P + ++TT V +
Sbjct: 171 GRYNCTATNHIGTRFQEYILAL--ADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIH 228
Query: 214 HYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTA- 272
HY+V + + + L P Y I V V+ +
Sbjct: 229 HYQVDVKEVASEIW----KIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIE 284
Query: 273 QYRTIPLRPLSFTYDKA-SITSNSLRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITK 330
++T+P+R S + S ++ G + +Y V R +
Sbjct: 285 IFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVK---YRSKDKEDQWLE 341
Query: 331 SRDEPTQCD-MSEGLEPGRTYQVLVK 355
+ + + + E L+ Y+V +
Sbjct: 342 KKVQGNKDHIILEHLQWTMGYEVQIT 367
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-06
Identities = 32/217 (14%), Positives = 64/217 (29%), Gaps = 35/217 (16%)
Query: 90 PDPPTNLSVNVRSGKTAQIFWSPPISG-----------KYSGFKLKVISLSEKTPPRIIG 138
PPT +V S ++ + W P + + G + + ++ P
Sbjct: 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPK 61
Query: 139 FTENPPAG--YSLKDLTPGGSYQVQLFSVYD------SKESVAYTSRNFTTK--PNTPGK 188
+ S+ DL P +Y+ ++ +VY S S + + P
Sbjct: 62 WNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPEL 121
Query: 189 FIVWFRNETTLLVLWQPSYPASIY----THYKVSIDPPDAPESVLYVEKEGEPPGPAQAA 244
+ +ET +++ W + T Y P + Y + E
Sbjct: 122 LEIEEYSETAVVLHWSL--ASDADEHLITGYYAYYRPSSSAGE--YFKATIEGAHARSFK 177
Query: 245 FKGLVPGRAYNISVQTVSED------EISTPTTAQYR 275
L Y +Q+ S + T + +
Sbjct: 178 IAPLETATMYEFKLQSFSAASASEFSALKQGRTQRPK 214
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 5e-06
Identities = 18/87 (20%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 195 NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254
TT +V WQP P V+ + P V+ L P Y
Sbjct: 14 TLTTAVVTWQP--PILPIEGILVTFGRKNDPSDETTVDL---TSSITSLTLTNLEPNTTY 68
Query: 255 NISVQTVSEDEISTPTTAQYRTIPLRP 281
I + + + S P + + T L
Sbjct: 69 EIRIVARNGQQYSPPVSTTFTTGSLEH 95
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 8e-06
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG--YS 148
PP N+ V + TA + W PP G +++ K P + + +
Sbjct: 3 QPPFNIKVTNITLTTAVVTWQPP-ILPIEGI---LVTFGRKNDPSDETTVDLTSSITSLT 58
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183
L +L P +Y++++ + + S S FTT
Sbjct: 59 LTNLEPNTTYEIRIVARNGQQYSPP-VSTTFTTGS 92
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100 | Back alignment and structure |
|---|
Score = 38.5 bits (90), Expect = 3e-04
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 SITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349
+IT + V W+PP + V+ + + T + + T ++ LEP T
Sbjct: 12 NITLTTAVVTWQPPI--LPIEGILVTFGRKNDPSDETTVDLTSSI-TSLTLT-NLEPNTT 67
Query: 350 YQVLVKTVSGK 360
Y++ + +G+
Sbjct: 68 YEIRIVARNGQ 78
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 1e-05
Identities = 22/176 (12%), Positives = 47/176 (26%), Gaps = 10/176 (5%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
P P + W + T++ + + + + + + P
Sbjct: 8 PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA----DCKAKRDTPTS 63
Query: 243 AAF-KGLVPGRAYNISVQTVSEDEISTPT----TAQYRTIPLRPLSFTYDKASITSNSLR 297
V + V+ + T Y+ P P + + + S+ L+
Sbjct: 64 CTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILK 123
Query: 298 VVWEPPKGFSEFD-KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352
+ W P S KY + + S + + L+P Y
Sbjct: 124 LTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVF 179
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A Length = 215 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 2e-04
Identities = 43/212 (20%), Positives = 67/212 (31%), Gaps = 18/212 (8%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
PP+ P NLS V GK + W + F LK + + P +
Sbjct: 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKS-EWATHKFADCKAKRDTPTSC 64
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT----KPNTPGKFIVWFRNET--TLL 200
+ +V + + ++ V NF KPN P V E L
Sbjct: 65 TVDYSTVYFVNIEVWVEAE-NALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILK 123
Query: 201 VLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259
+ W PS + I Y + DA + E + + L P Y ++
Sbjct: 124 LTWTNPSIKSVIILKYNIQYRTKDASTWS-QIPPEDTASTRSSFTVQDLKPFTEYVFRIR 182
Query: 260 TVSED------EISTPTTAQ-YRTIPLRPLSF 284
+ ED + S + Y P + SF
Sbjct: 183 CMKEDGKGYWSDWSEEASGITYEDRPSKEPSF 214
|
| >3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 1e-05
Identities = 43/289 (14%), Positives = 74/289 (25%), Gaps = 32/289 (11%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYS 148
PP N ++ V + W P + L+ + P+ + +
Sbjct: 11 SLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEY--QVKINAPKEDDYETRITESKA 68
Query: 149 LKDLTPGGSYQVQLFSVYD-SKESVAYTSRNFTTKPNTPGKFIVWF-------------- 193
+ L G S V+ D S + ++ S P +PG IV
Sbjct: 69 VTILHMGFSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRL 128
Query: 194 -RNETTLLVLWQPSYPASIYTHYKVSI-DPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251
+ +L W A T Y + E Y ++
Sbjct: 129 RSYQVSLHCTWMVGTDAPEDTQYFLYYRYGSWTEECQEYSMDTLGRNIACWFPRTFILSK 188
Query: 252 RA--YNISVQTVSEDEISTPTTAQYRT----IPLRPLSFTYDKASITSNSLRVVWEPPKG 305
+ V S+ P + PL+ T A I + + WE P
Sbjct: 189 GRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQINPPLNVT---AEIEGTRMSIQWEKPVS 245
Query: 306 FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354
+ + + I K ++ Y V V
Sbjct: 246 AFPIHCFDYEVKIHNTRNGYLQIEKLMTNAFIS----IIDDLSKYDVQV 290
|
| >3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* Length = 380 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 1e-05
Identities = 44/299 (14%), Positives = 86/299 (28%), Gaps = 36/299 (12%)
Query: 81 TWTASITTPPDPPTNLSVNVRSGKTAQIF--WSPP-----ISGKYSGFKLKVISLSEKTP 133
T ++ +PP + + V G ++ W PP ++LK ++ +T
Sbjct: 23 TSSSDTEIKVNPPQDFEI-VDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETW 81
Query: 134 PRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS---------RNFTTKPN 184
II T+N DL G + + S
Sbjct: 82 KTII--TKNLHY-KDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPET 138
Query: 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSI--DPPDAPESVLYVEKEGEPPGPAQ 242
+ N LL W+P + T+Y + + D + K +
Sbjct: 139 XVQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCR 198
Query: 243 AAFKGLVPGRAYNISVQ------TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
+ + + I V + + + +P L+FT +S +
Sbjct: 199 FPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLPPVYLTFT----RESSCEI 254
Query: 297 RVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355
++ W P G + I +R + T + T + R +V+
Sbjct: 255 KLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVENETYT----LKTTNETRQLCFVVR 309
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} Length = 206 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 1e-05
Identities = 22/143 (15%), Positives = 45/143 (31%), Gaps = 5/143 (3%)
Query: 25 NSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTN---STVHDWLT 81
+S Y D H P Y+ D F + Y ++ + S
Sbjct: 42 SSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSGYTMWIRINHSLGSLDSPPTC 101
Query: 82 WTASITTPPDPPTNLSV-NVRSGKTAQIFWSPPISGKYS-GFKLKVISLSEKTPPRIIGF 139
P PP+++ + +I W P+ + + F+++ ++ ++
Sbjct: 102 VLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV 161
Query: 140 TENPPAGYSLKDLTPGGSYQVQL 162
+ SL Y VQ+
Sbjct: 162 YDAKSKSVSLPVPDLCAVYAVQV 184
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 2e-05
Identities = 47/335 (14%), Positives = 98/335 (29%), Gaps = 38/335 (11%)
Query: 42 NTTYVSRDIKDNIEFSEGLPGTKYDFYL---YYTNSTVHD----WLTWTASITTPPDPPT 94
NT +D + ++ LP + ++ +S W W+ T
Sbjct: 145 NTMLSGKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNT 204
Query: 95 NLSV-----NVRSGKTAQIFWSPP---ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
+V V +G I P +SG+ +I L +T
Sbjct: 205 ETNVFPQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHLYGQTV------------A 252
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPS 206
+ ++ + + ++ + + V T P+ P K + ++ W P
Sbjct: 253 IHILNIPVSENSGTNI--IFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPG 310
Query: 207 YPASIYTHYKVSIDPP--DAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ---TV 261
+ + +S ++ EG + + +N ++ +
Sbjct: 311 RITGLVGPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPL 370
Query: 262 SEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD-KYQVSINVRR 320
+ + + R P P S I S + W P F++ + Q+ I
Sbjct: 371 GQAQSAVVINVTERVAPHDPTSLKVK--DINSTVVTFSWYLPGNFTKINLLCQIEICKAN 428
Query: 321 PGASSTPITKSRDEPTQCDMS-EGLEPGRTYQVLV 354
T E + ++ + L P Y V
Sbjct: 429 SKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRV 463
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} Length = 488 | Back alignment and structure |
|---|
Score = 43.0 bits (100), Expect = 1e-04
Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 6/146 (4%)
Query: 22 SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81
N+ Y L + + + + ++F L N
Sbjct: 317 GPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQSA 376
Query: 82 WTASIT--TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKV----ISLSEKTPPR 135
++T P PT+L V + W P + ++ + ++
Sbjct: 377 VVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNA 436
Query: 136 IIGFTENPPAGYSLKDLTPGGSYQVQ 161
I E+ ++ L P +Y +
Sbjct: 437 TIRGAEDSTYHVAVDKLNPYTAYTFR 462
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* Length = 214 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 2e-05
Identities = 26/184 (14%), Positives = 44/184 (23%), Gaps = 15/184 (8%)
Query: 20 NLSSDNSTYRLDYIPAHG----HPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTN-- 73
+S D P ++ I + + +
Sbjct: 29 QDTSCQVHAWPDRRRWQQTCELLPVSQASWACNLILGAPDSQKLTTVDIVTLRVLCREGV 88
Query: 74 -STVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG----FKLKVISL 128
V + P +L V I W + Y F+ + +S
Sbjct: 89 RWRVMAIQDFKPFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSP 148
Query: 129 SEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAY----TSRNFTTKPN 184
+ + L+ LTP Y+ Q+ E + F TKP
Sbjct: 149 GHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208
Query: 185 TPGK 188
GK
Sbjct: 209 ALGK 212
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 3e-05
Identities = 36/294 (12%), Positives = 80/294 (27%), Gaps = 31/294 (10%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPP 144
P P + V++ + W+ + +S K + T
Sbjct: 3 PLKSPQKVEVDIIDDNF-ILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITS-TK 60
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKF--IVWFRNETTLLVL 202
+S L ++++ + + S Y +FT + + +++
Sbjct: 61 CNFSSLKLNVYEEIKLRIRAEKE-NTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIH 119
Query: 203 WQPSYPAS-------IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255
P S + Y + I + L P Y
Sbjct: 120 ISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIENIYSR------HKIYKLSPETTYC 173
Query: 256 ISVQTVSEDE----ISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD- 310
+ V+ + +P T+ + S+ + + + W+ F
Sbjct: 174 LKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQV 233
Query: 311 KYQVSINVRRPGASS---TPITKSRD-EPTQCDMSEGLEPGRTYQVLVKTVSGK 360
++ + R PG I + + TQC + + Y + V+ G
Sbjct: 234 QWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGN 287
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 4e-05
Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 7/107 (6%)
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA----PESVLYVEKEG 235
+ + V ++L + W+ P + + + P P +++E
Sbjct: 6 SGSRPRLSQLSVTDVTTSSLRLNWEA--PPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL 63
Query: 236 EPPGPA-QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP 281
PG A + L G Y++++ + + RT+
Sbjct: 64 MVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGPS 110
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112 | Back alignment and structure |
|---|
Score = 38.4 bits (89), Expect = 4e-04
Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 9/111 (8%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
++ + + LSV + + ++ W P G + F L+ S T
Sbjct: 2 SSGSSGSRPRLSQLSVTDVTTSSLRLNWEAP-PGAFDSFLLRFGVPSPSTLEPHPRPLLQ 60
Query: 143 PPAG-------YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
L+DL G Y + L+ + ++ + T
Sbjct: 61 RELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQG-TARTLSGPS 110
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 4e-05
Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPP 144
++ PT L V + + +I W S +++ +P +
Sbjct: 5 SSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEF-TVPGYY 63
Query: 145 AGYSLKDLTPGGSYQVQLFSVYDSKESVA 173
+ ++ L PG Y + +++
Sbjct: 64 STATISGLKPGVDYTITVYAYDTFFPGYE 92
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 1e-04
Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 180 TTKPNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPP 238
++ + P K V T+L + W +Y+++ V G
Sbjct: 5 SSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYY- 63
Query: 239 GPAQAAFKGLVPGRAYNISVQTVSED----EISTPTTAQYRT 276
+ A GL PG Y I+V E ++P + YRT
Sbjct: 64 --STATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYRT 103
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-05
Identities = 12/73 (16%), Positives = 27/73 (36%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYS 148
P + PT + V V S + W + ++++ + +K +
Sbjct: 18 PSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYSAR 77
Query: 149 LKDLTPGGSYQVQ 161
L++L P Y ++
Sbjct: 78 LENLLPDTQYFIE 90
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A Length = 210 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 3e-04
Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 15/183 (8%)
Query: 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242
P P F N+ T W+P + T+Y ++ + P
Sbjct: 4 PGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPNSCH 63
Query: 243 AAFKGLVPGRAYNISVQTVSE------DEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296
+ R Y + V ++ DE+ T + P L+ + L
Sbjct: 64 FGKQYTSMWRTYIMMVNATNQMGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYL 123
Query: 297 RVVWEPPKGFSEFD-----KYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQ 351
+ W PP Y++ + +P ++ + T+ + L PG+ Y
Sbjct: 124 WIKWSPPTLIDLKTGWFTLLYEIRL---KPEKAAEWEIHFAGQQTEFKIL-SLHPGQKYL 179
Query: 352 VLV 354
V V
Sbjct: 180 VQV 182
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A Length = 325 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 5e-04
Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 12/156 (7%)
Query: 18 PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGL-----PGTKYDFYLYYT 72
P + S + L P + + +++ +FS L + Y +
Sbjct: 117 PRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVA 176
Query: 73 N---STVHDWLTWTASITTPPDPPTNLSVNVRSGK--TAQIFWSPPISGKYSGFKLK--V 125
+ S T+ PDPP N++V + + W P S S ++L+ +
Sbjct: 177 SSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFEL 236
Query: 126 ISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161
+E++ ++ + D G + VQ
Sbjct: 237 RYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQ 272
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115 | Back alignment and structure |
|---|
Score = 38.1 bits (89), Expect = 6e-04
Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Query: 83 TASITTP---PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGF 139
+ T P P N S + + W+PP S + ++L RI
Sbjct: 8 DIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRI--- 64
Query: 140 TENPPAGYSLKDLTPGGSYQVQL 162
T P Y L+ L P Y +L
Sbjct: 65 TIEPGTSYRLQGLKPNSLYYFRL 87
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* Length = 207 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 7e-04
Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 11/155 (7%)
Query: 18 PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKD----NIEFSEGLPGTKYDFYLYYTN 73
++ ++ RL Y +T + ++ + + Y L+
Sbjct: 23 MNGPTNCSTELRLLYQLVFLLSEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQ 82
Query: 74 STVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSG-----FKLKVISL 128
+ ++ S P P NL+V+ T + WS P + + + S
Sbjct: 83 QLLWK-GSFKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSE 141
Query: 129 SEKTPPRIIGFTENPPAGY-SLKDLTPGGSYQVQL 162
++ RI T P+ + L G SY+ ++
Sbjct: 142 NDPADFRIYNVTYLEPSLRIAASTLKSGISYRARV 176
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121 | Back alignment and structure |
|---|
Score = 37.8 bits (88), Expect = 9e-04
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 20/109 (18%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPP--ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
P P ++ + S T + W P +G+ G+++ + +
Sbjct: 18 PSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQI 77
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSR---------NFTTKPNTP 186
++ +L P +Y V++ +A+TS T+ +
Sbjct: 78 TTIGNLVPQKTYSVKV---------LAFTSIGDGPLSSDIQVITQTGSG 117
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 100.0 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 100.0 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 100.0 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 100.0 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 100.0 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 100.0 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 100.0 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 100.0 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 100.0 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 100.0 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 100.0 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 100.0 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 99.97 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 99.97 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 99.97 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 99.97 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 99.96 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 99.96 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 99.95 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 99.94 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 99.93 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 99.92 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 99.92 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 99.91 | |
| 3lb6_C | 380 | IL-13, interleukin-13 receptor subunit alpha-2; cy | 99.91 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 99.91 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 99.91 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 99.9 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 99.9 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 99.9 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 99.9 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 99.9 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 99.9 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 99.9 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 99.88 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 99.88 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 99.87 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 99.87 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 99.87 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 99.87 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 99.87 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 99.87 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 99.87 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 99.87 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 99.86 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 99.85 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 99.84 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 99.83 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 99.83 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 99.83 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 99.81 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 99.8 | |
| 2dtg_E | 897 | Insulin receptor; IR ectodomain, X-RAY crystallogr | 99.8 | |
| 3lb6_C | 380 | IL-13, interleukin-13 receptor subunit alpha-2; cy | 99.79 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 99.79 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 99.78 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 99.78 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 99.77 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 99.76 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 99.75 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 99.74 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 99.69 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 99.67 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 99.66 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 99.66 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 99.65 | |
| 3qt2_A | 317 | Interleukin-5 receptor subunit alpha; cytokine typ | 99.65 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 99.63 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 99.63 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 99.62 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 99.6 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 99.6 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 99.57 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 99.57 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 99.55 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 99.55 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 99.54 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 99.54 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 99.53 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 99.52 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 99.51 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 99.51 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 99.5 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 99.5 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 99.49 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 99.49 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 99.49 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 99.49 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 99.48 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 99.48 | |
| 3g9v_A | 211 | Interleukin 22 receptor, alpha 2; cytokine, cytoki | 99.48 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 99.48 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 99.47 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 99.47 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 99.47 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 99.46 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 99.46 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.46 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 99.45 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.44 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 99.44 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 99.43 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 99.43 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 99.43 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 99.43 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.42 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 99.42 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 99.42 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 99.42 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 99.42 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 99.42 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 99.42 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 99.42 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 99.41 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 99.41 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 99.41 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 99.41 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.41 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 99.41 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.41 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.41 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 99.41 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 99.4 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 99.4 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 99.4 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 99.4 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 99.4 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 99.4 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 99.4 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 99.39 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 99.39 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 99.39 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 99.39 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 99.38 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 99.38 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 99.38 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 99.38 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 99.38 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 99.37 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 99.37 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 99.37 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 99.37 | |
| 3g9v_A | 211 | Interleukin 22 receptor, alpha 2; cytokine, cytoki | 99.37 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.37 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.37 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 99.36 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 99.36 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 99.36 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 99.36 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 99.35 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 99.35 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 99.35 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 99.35 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 99.35 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 99.35 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 99.34 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 99.34 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 99.34 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 99.34 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 99.33 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 99.33 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 99.33 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.33 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 99.33 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 99.33 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 99.33 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 99.33 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 99.33 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 99.32 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 99.32 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 99.31 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 99.31 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 99.31 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 99.31 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 99.31 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 99.31 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 99.3 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 99.3 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 99.3 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 99.3 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 99.29 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 99.29 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 99.29 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 99.29 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 99.29 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 99.29 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 99.29 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 99.28 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 99.28 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 99.28 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 99.28 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 99.27 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 99.27 | |
| 2nzi_A | 305 | Titin; IG-domain, FNIII-domain, transferase; 2.90A | 99.27 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.27 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.27 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 99.26 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 99.25 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 99.25 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 99.25 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 99.25 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 99.25 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 99.24 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 99.24 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 99.24 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 99.24 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 99.24 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 99.24 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 99.24 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 99.23 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 99.22 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 99.22 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 99.22 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 99.21 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 99.21 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 99.21 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 99.2 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 99.2 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 99.2 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 99.2 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 99.2 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 99.2 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 99.19 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 99.18 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 99.18 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 99.18 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 99.15 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 99.15 | |
| 2nzi_A | 305 | Titin; IG-domain, FNIII-domain, transferase; 2.90A | 99.15 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 99.14 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 99.14 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 99.14 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 99.14 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 99.13 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 99.12 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 99.12 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 99.11 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 99.11 | |
| 3qt2_A | 317 | Interleukin-5 receptor subunit alpha; cytokine typ | 99.09 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 99.09 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 99.09 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 99.09 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 99.07 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 99.04 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 99.03 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 98.99 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 98.98 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 98.97 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 98.95 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 98.94 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 98.93 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 98.92 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 98.92 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 98.91 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 98.88 | |
| 3d85_D | 306 | IL-12B, interleukin-12 subunit P40, cytotoxic lymp | 98.87 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 98.86 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 98.84 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 98.83 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 98.82 | |
| 3dlq_R | 211 | Interleukin-22 receptor subunit alpha-1; cytokine- | 98.82 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 98.78 | |
| 3og6_B | 226 | Interleukin 28 receptor, alpha (interferon, lambd | 98.75 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 98.73 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 98.7 | |
| 1fyh_B | 229 | Interferon-gamma receptor alpha chain; cytokine-re | 98.69 | |
| 3d85_D | 306 | IL-12B, interleukin-12 subunit P40, cytotoxic lymp | 98.68 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 98.67 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 98.61 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 98.6 | |
| 1y6k_R | 214 | Interleukin-10 receptor alpha chain; helix bundle, | 98.53 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 98.51 | |
| 2hft_A | 218 | Human tissue factor; coagulation factor; 1.69A {Ho | 98.51 | |
| 3og6_B | 226 | Interleukin 28 receptor, alpha (interferon, lambd | 98.44 | |
| 3dlq_R | 211 | Interleukin-22 receptor subunit alpha-1; cytokine- | 98.42 | |
| 1fyh_B | 229 | Interferon-gamma receptor alpha chain; cytokine-re | 98.29 | |
| 3s9d_B | 199 | Interferon alpha/beta receptor 2; human, type I in | 98.18 | |
| 1y6k_R | 214 | Interleukin-10 receptor alpha chain; helix bundle, | 98.01 | |
| 3s9d_B | 199 | Interferon alpha/beta receptor 2; human, type I in | 97.98 | |
| 1wft_A | 123 | 1700129L13RIK protein; FN3 domain, similar to HOST | 97.95 | |
| 1wft_A | 123 | 1700129L13RIK protein; FN3 domain, similar to HOST | 97.92 | |
| 2hft_A | 218 | Human tissue factor; coagulation factor; 1.69A {Ho | 97.88 | |
| 3b4n_A | 344 | Endo-pectate lyase; pectin, galacturonic acid, rig | 97.15 | |
| 3b4n_A | 344 | Endo-pectate lyase; pectin, galacturonic acid, rig | 96.79 | |
| 3cxe_C | 120 | Granulocyte-macrophage colony-stimulating factor s | 96.54 | |
| 3bes_R | 250 | Interferon-gamma binding protein C4R; orthopoxviru | 96.49 | |
| 3bes_R | 250 | Interferon-gamma binding protein C4R; orthopoxviru | 96.28 | |
| 2csp_A | 130 | RIM-BP2, RIM binding protein 2; FN3 domain, struct | 95.91 | |
| 4go6_A | 45 | HCF N-terminal chain 1; tandem fibronectin repeat, | 95.69 | |
| 4go6_A | 45 | HCF N-terminal chain 1; tandem fibronectin repeat, | 95.53 | |
| 3cxe_C | 120 | Granulocyte-macrophage colony-stimulating factor s | 95.44 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 95.35 | |
| 2uvf_A | 608 | Exopolygalacturonase; GH28, pectin, cell WALL, hyd | 95.18 | |
| 2csp_A | 130 | RIM-BP2, RIM binding protein 2; FN3 domain, struct | 95.17 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 93.52 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 90.11 | |
| 3arx_A | 584 | Chitinase A; TIM barrel, inhibitor complex, glycos | 87.84 | |
| 3arx_A | 584 | Chitinase A; TIM barrel, inhibitor complex, glycos | 87.18 | |
| 4gns_A | 290 | Chitin biosynthesis protein CHS5; FN3, BRCT, tetra | 84.98 | |
| 4gns_A | 290 | Chitin biosynthesis protein CHS5; FN3, BRCT, tetra | 83.87 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 83.15 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 82.84 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 82.61 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 82.34 | |
| 2e7m_A | 113 | Protein KIAA0319; PKD domain, structural genomics, | 81.0 |
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=304.52 Aligned_cols=336 Identities=21% Similarity=0.327 Sum_probs=266.7
Q ss_pred ceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecC
Q psy4956 10 GANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTP 89 (361)
Q Consensus 10 ~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~ 89 (361)
...|.|+.|.. +.+.+|+|+|+..++............+.+++.|.+|.|++.|.|+|+|.++. +.+.+........
T Consensus 19 sv~l~W~~~~~--~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~-g~s~~~~~~~~~~ 95 (375)
T 3t1w_A 19 VLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDD-KESVPISDTIIPE 95 (375)
T ss_dssp EEEEEEECCSC--SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEEETT-EECCCEEEEECCC
T ss_pred EEEEEEeCCCC--CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEEcCC-CCCCcEEeeEcCC
Confidence 56666666644 57999999999866543223333333447999999999999999999999877 4455555555555
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+.+|.++.+...+.+++.|+|+++.++.+.+|+|+|+..+.........+..... .+.|.+|.|++.|.|+|+|.+..|
T Consensus 96 ~p~p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g 174 (375)
T 3t1w_A 96 VPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVG-YYTVTGLEPGIDYDISVITLINGG 174 (375)
T ss_dssp CCCCSCCEEECCCSSEEEEECCCCCCTTEEEEEEEEEESSSCCSCEEEEECTTCC-EEEEECCCTTCEEEEEEEEEETTE
T ss_pred CCCCceEEEEecCCCeEEEEEECCCCCCceEEEEEEEECCCCCceeEEEcCCCcc-eEEEeCCCCCCEEEEEEEEEeCCc
Confidence 5568999999989999999999987678999999998865544445555666666 999999999999999999999998
Q ss_pred CcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCC
Q psy4956 170 ESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249 (361)
Q Consensus 170 ~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 249 (361)
.+.+.. ....+.+.+|.++.+...+.+++.|+|+++. .+.+.+|.|.|...+.......... ......+.+.+|.
T Consensus 175 ~s~~s~-~~~~t~~~~p~~l~~~~~~~~si~l~W~~p~-~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~ 249 (375)
T 3t1w_A 175 ESAPTT-LTQQTAVPPPTDLRFTNIGPDTMRVTWAPPP-SIDLTNFLVRYSPVKNEEDVAELSI---SPSDNAVVLTNLL 249 (375)
T ss_dssp ECCCEE-EEEECCCCCCEEEEEESCCSSCEEEEEECCS-SCCCCEEEEEEEEGGGTTCCEEEEE---CTTCCEEEECSCC
T ss_pred ccCCee-eeeecCCCCCceeEEEecccCEEEEEEcCCC-CCCccEEEEEEEeCCCCCCcEEEEc---CCCcCEEEeCCCC
Confidence 887644 4445566689999999899999999999873 4678999999987654322211211 2335899999999
Q ss_pred CCCeEEEEEEEEeCCCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCcee
Q psy4956 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329 (361)
Q Consensus 250 p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~ 329 (361)
|++.|.|+|+|.+..|.+.+......+.|.+|.++.+ ..++.+++.|+|++|.+ .+.+|.|.|...+... .....
T Consensus 250 p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~P~~l~~--~~~~~~sv~l~W~~p~~--~~~~Y~v~~~~~~~~~-~~~~~ 324 (375)
T 3t1w_A 250 PGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDF--SDITANSFTVHWIAPRA--TITGYRIRHHPEHFSG-RPRED 324 (375)
T ss_dssp TTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE--ESCCSSCEEEEEECCSS--CCSEEEEEEEETTCCS-SCEEE
T ss_pred CCCEEEEEEEEEcCCCcCCceeeEEecCCCCCCccEe--eeccCCEEEEEECCCCc--ceeeEEEEEEECCCCC-cceeE
Confidence 9999999999999999999988888999999999999 88899999999999876 8999999999876411 22223
Q ss_pred ecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 330 KSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 330 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
......+++.+.+ |+||+.|.|+|+|+++.
T Consensus 325 ~~~~~~~~~~i~~-L~p~t~Y~~~V~A~~~~ 354 (375)
T 3t1w_A 325 RVPHSRNSITLTN-LTPGTEYVVSIVALNGR 354 (375)
T ss_dssp EEETTCCEEEECS-CCTTCEEEEEEEEEETT
T ss_pred EcCCCccEEEECC-CCCCCEEEEEEEEECCC
Confidence 3456678999986 99999999999999864
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=302.81 Aligned_cols=335 Identities=19% Similarity=0.314 Sum_probs=267.1
Q ss_pred ceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecC
Q psy4956 10 GANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTP 89 (361)
Q Consensus 10 ~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~ 89 (361)
...|.|+.|. ++.+.+|+|+|+..++............+.++++|.+|.|++.|.|+|+|.+..| .+.+......+.
T Consensus 18 sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-~s~~~~~~~~~~ 94 (368)
T 1fnf_A 18 VLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDK-ESVPISDTIIPA 94 (368)
T ss_dssp CEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEEETTE-ECCCEEEEECCC
T ss_pred EEEEEEeCCC--CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEEEcCCC-ccCceeeeecCC
Confidence 3677777776 4679999999998665433233333444579999999999999999999998874 444445555666
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+.+|.++.+...+.+++.|+|++|.++.+.+|+|+|+..++........+..... .+.+.+|.|++.|.|+|+|.+..+
T Consensus 95 ~~~p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g 173 (368)
T 1fnf_A 95 VPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDN-AVVLTNLLPGTEYVVSVSSVYEQH 173 (368)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEEEECTTCC-EEEECSCCTTCEEEEEEEEEETTE
T ss_pred CcCCceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEEECCCCCccEEEEcCCCcc-eEEecCCCCCCEEEEEEEEEeCCC
Confidence 6788999998888999999999987778999999999876544555666666666 999999999999999999999988
Q ss_pred CcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCC
Q psy4956 170 ESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLV 249 (361)
Q Consensus 170 ~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 249 (361)
.+.+ ......+.|.+|.++.+...+.+++.|+|+++ .+.+.+|.|.|...+.......... ....+.+.+.+|.
T Consensus 174 ~s~~-~~~~~~~~~~~P~~l~~~~~~~~sv~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~ 247 (368)
T 1fnf_A 174 ESTP-LRGRQKTGLDSPTGIDFSDITANSFTVHWIAP--RATITGYRIRHHPEHFSGRPREDRV---PHSRNSITLTNLT 247 (368)
T ss_dssp ECCC-EEEEEECCCCCCEEEEEESCCSSEEEEEEECC--SSCCSEEEEEEECSCCSSCCEEEEE---ETTCCEEEEESCC
T ss_pred CCCC-eEeeecCCCCCCCccEEEEccCCEEEEEEeCC--CCCcCEEEEEEecCCCCCCccEEEe---CCCcCEEEECCCC
Confidence 8765 33444566778999999998999999999987 4678999999987654322111111 2335789999999
Q ss_pred CCCeEEEEEEEEeCCCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCcee
Q psy4956 250 PGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329 (361)
Q Consensus 250 p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~ 329 (361)
|++.|.|+|.|.+..|.+.+......+.|.+|.++.+ ...+.+++.|+|+++.+ .+.+|.|.|...++.. .....
T Consensus 248 p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~P~~l~~--~~~~~~sv~l~W~~p~~--~i~~Y~v~~~~~~~~~-~~~~~ 322 (368)
T 1fnf_A 248 PGTEYVVSIVALNGREESPLLIGQQSTVSDVPRDLEV--VAATPTSLLISWDAPAV--TVRYYRITYGETGGNS-PVQEF 322 (368)
T ss_dssp TTCEEEEEEEEEETTEECCCEEEEEECCCCSCEEEEE--EEEETTEEEEEEECCSS--CCSEEEEEEEETTCCS-CCEEE
T ss_pred CCCEEEEEEEEEeCCccCCcccccccCCCCCCCeeEE--EecCCCEEEEEeeCCCC--ccceEEEEEEECCCCC-ccEEE
Confidence 9999999999999999888888788888999999999 78888999999999987 7899999999876422 22223
Q ss_pred ecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 330 KSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 330 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
......+.+.+.+ |+||+.|.|+|+|.++.
T Consensus 323 ~~~~~~~~~~~~~-L~p~t~Y~~~V~A~~~~ 352 (368)
T 1fnf_A 323 TVPGSKSTATISG-LKPGVDYTITVYAVTGR 352 (368)
T ss_dssp EEETTCCEEEECS-CCTTCCEEEEEEEECCC
T ss_pred EcCCCeeEEEecC-CCCCCEEEEEEEEeCCC
Confidence 3456678999996 99999999999999864
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=251.82 Aligned_cols=263 Identities=24% Similarity=0.359 Sum_probs=215.6
Q ss_pred eEEEecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 83 ~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
...+.+.|.+|.++.+...+.+++.|+|++|. +.+.+|+|+|+.....+......+..... .+.|.+|.|++.|.|+|
T Consensus 8 ~~~~~~~p~~P~~l~~~~~~~~sv~l~W~~~~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V 85 (283)
T 1tdq_A 8 GGGGIPVIDGPTQILVRDVSDTVAFVEWTPPR-AKVDFILLKYGLVGGEGGKTTFRLQPPLS-QYSVQALRPGSRYEVSI 85 (283)
T ss_dssp ----CCSSCCCEEEEEEEECSSCEEEEEECCS-SCCSEEEEEEEESSSSCCCEEEEECTTCS-EEEECSCCTTCEEEEEE
T ss_pred ccccccCCCCCcEEEEEecCCCeEEEEEECCC-CceeEEEEEEEEecCCCCcEEEEeCCCCC-EEEecCCCCCCEEEEEE
Confidence 45667889999999999999999999999986 78899999998765444456666666666 99999999999999999
Q ss_pred EEEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCc-eeEEeeccCCCCCc
Q psy4956 163 FSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPES-VLYVEKEGEPPGPA 241 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~~ 241 (361)
+|.+..+.+.+ ....+.+.|.+|.++.+...+.+++.|+|+++. +.+.+|.|.|...++... ...+... .....
T Consensus 86 ~a~~~~g~s~~-~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~--~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~ 160 (283)
T 1tdq_A 86 SAVRGTNESDA-SSTQFTTEIDAPKNLRVGSRTATSLDLEWDNSE--AEAQEYKVVYSTLAGEQYHEVLVPKG--IGPTT 160 (283)
T ss_dssp EEEETTEECCC-EEEEEECCCCCCEEEEEEEECSSCEEEEEECCS--SCCSEEEEEEEETTCCCCEEEEEECC--SSSEE
T ss_pred EEECCCCCCCC-eeEEEECCCCCCCceEEEecCCCeEEEEecCCC--CCccEEEEEEEeCCCCcceEEECCCC--Ccccc
Confidence 99998888764 556677788899999999999999999999873 678999999988766443 2222211 11147
Q ss_pred EEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCC
Q psy4956 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP 321 (361)
Q Consensus 242 ~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~ 321 (361)
.+.+.+|.|++.|.|+|.|.++.+.+.+......+.+.+|.++.+ ...+.+++.|+|+++++ .+.+|.|.|...++
T Consensus 161 ~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P~~l~~--~~~~~~sv~l~W~~p~~--~i~~Y~v~~~~~~~ 236 (283)
T 1tdq_A 161 KTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMV--TASSETSISLIWTKASG--PIDHYRITFTPSSG 236 (283)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE--EEECSSCEEEEEECCCS--CCSEEEEEEECSSS
T ss_pred eEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCCCccEE--eEecCCEEEEEEeCCCC--cccEEEEEEEcCCC
Confidence 899999999999999999999999999988888899999999999 88899999999999987 89999999987754
Q ss_pred CCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 322 GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
. ..........+++.+.+ |.||+.|.|+|+|++++
T Consensus 237 ~---~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~~~~ 271 (283)
T 1tdq_A 237 I---SSEVTVPRDRTSYTLTD-LEPGAEYIISITAERGR 271 (283)
T ss_dssp C---CEEEEEESSCSEEEECC-CCTTCCEEEEEEEEETT
T ss_pred C---eeEEEeCCCccEEEECC-CCCCCEEEEEEEEEcCC
Confidence 1 22233456677999996 99999999999999874
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-35 Score=272.47 Aligned_cols=346 Identities=14% Similarity=0.153 Sum_probs=231.4
Q ss_pred CCCceEEEEecCCCC-CCCcceEEEEEEcCCC----C--CCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCcc
Q psy4956 7 GVHGANLVIKIPENL-SSDNSTYRLDYIPAHG----H--PPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDW 79 (361)
Q Consensus 7 ~~~~~~l~~~~p~~~-~~~~~~Y~v~~~~~~~----~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~ 79 (361)
..+...|.|+.|.+. ..++. |.|+|+...| . ......+.. ...++++|.+|.|++.|.|+|+|.|..|..+
T Consensus 173 ~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~~~~w~~v~~-~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~ 250 (680)
T 1zlg_A 173 QSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDDATHWQTVAQ-TTDERVQLTDIRPSRWYQFRVAAVNVHGTRG 250 (680)
T ss_pred cCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccccCceEEEEe-cCCCeEEeCCCCCCCEEEEEEEEEeCCCCCC
Confidence 445566777777543 44666 9999998544 1 011233333 2367899999999999999999998765221
Q ss_pred c-eeeEEEe-----cCCCCCCccEEEEE--eCC---EEEEEeeCCC--CCCcccEEEEEEEC-CC-----CCCCeEEeec
Q psy4956 80 L-TWTASIT-----TPPDPPTNLSVNVR--SGK---TAQIFWSPPI--SGKYSGFKLKVISL-SE-----KTPPRIIGFT 140 (361)
Q Consensus 80 ~-~~~~~~~-----t~~~~p~~l~~~~~--~~~---~v~l~W~~p~--~~~~~~y~v~~~~~-~~-----~~~~~~~~~~ 140 (361)
. .....+. ..|.+|.++.+... +.+ ++.|+|++|. ++.+.+|+|+|+.. +. ........+.
T Consensus 251 ~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~ 330 (680)
T 1zlg_A 251 FTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTD 330 (680)
T ss_pred CCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEc
Confidence 1 1122222 35778899999887 777 9999999875 57799999999832 11 1122334455
Q ss_pred CCCCceEEEcCCCCCcEEEEEEEEEeCCCCccccee---eeeccCCC--CCcceEEEeccCCeEEE-----------Eee
Q psy4956 141 ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTS---RNFTTKPN--TPGKFIVWFRNETTLLV-----------LWQ 204 (361)
Q Consensus 141 ~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~---~~~~t~p~--~p~~l~~~~~~~~~~~v-----------~W~ 204 (361)
...+ .+.|.+|.|++.|.|+|+|.+..|.+..+.. ..++|.+. .|.++.+...+.+++.| .|+
T Consensus 331 ~~~~-~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~ 409 (680)
T 1zlg_A 331 GFQN-SVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVG 409 (680)
T ss_pred CCee-EEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCCccccccccccCccccccccccCCCcccccc
Confidence 5556 8999999999999999999998877654332 44555422 26678887778888876 998
Q ss_pred cCCCCCcceEEEEEEeCCCCCC-ceeEEe---------------eccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCC
Q psy4956 205 PSYPASIYTHYKVSIDPPDAPE-SVLYVE---------------KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST 268 (361)
Q Consensus 205 ~~~~~~~~~~y~v~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~ 268 (361)
++...+.+.+|.|.|...+... ....+. ........+.+.|.+|.|++.|.|+|+|.+..|.+.
T Consensus 410 ~P~~~~~~~~y~v~w~~~~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~ 489 (680)
T 1zlg_A 410 APFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSK 489 (680)
T ss_pred CCcccCCcceEEEEEeCCCCCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCC
Confidence 8743445678999988765422 000000 000122357899999999999999999999888543
Q ss_pred ceEEEEec--------------------------CCCCCcc----ceEEeeecCCceEEEEeeCCCC--CCCceeEEEEE
Q psy4956 269 PTTAQYRT--------------------------IPLRPLS----FTYDKASITSNSLRVVWEPPKG--FSEFDKYQVSI 316 (361)
Q Consensus 269 ~~~~~~~t--------------------------~~~~p~~----l~~~~~~~~~~si~l~W~~~~~--~~~~~~y~i~~ 316 (361)
+....+.+ .+.+|.+ +.+ ...+.+ +.|+|++|.. .+.+++|.|.|
T Consensus 490 ~~~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v--~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y 566 (680)
T 1zlg_A 490 AEAVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIV--QDVNIT-GHFSWKMAKANLYQPMTGFQVTW 566 (680)
T ss_pred ccccceeCCCccccccCCccccccCCCCccccccccCCccccceeEEE--eccCce-EEEEecCCCCCCCCCceeEEEEE
Confidence 22211111 1256777 445 455555 9999999842 35899999999
Q ss_pred EECCCCCC---CCc-e----eecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 317 NVRRPGAS---STP-I----TKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 317 ~~~~~~~~---~~~-~----~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.....+.. ... . ....+..+++++.+ |+||+.|.|+|.|.+.
T Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~~V~A~n~ 616 (680)
T 1zlg_A 567 AEVTTESRQNSLPNSIISQSQILPSDHYVLTVPN-LRPSTLYRLEVQVLTP 616 (680)
T ss_pred EEccCCCccccccceeeecccccCCcccEEEecC-CCCCceEEEEEEEEcC
Confidence 87643221 111 1 11224567899986 9999999999999964
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=245.49 Aligned_cols=262 Identities=21% Similarity=0.381 Sum_probs=212.2
Q ss_pred EEEecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 84 ~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
....+.|.+|.+|.+...+.+++.|+|++| ++.+.+|+|+|+..+.........+..... .+.|.+|.|++.|.|+|+
T Consensus 15 ~~~~~~p~~P~~l~~~~~~~~sv~l~W~~p-~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~ 92 (290)
T 3r8q_A 15 LFQGPAIPAPTDLKFTQVTPTSLSAQWTPP-NVQLTGYRVRVTPKEKTGPMKEINLAPDSS-SVVVSGLMVATKYEVSVY 92 (290)
T ss_dssp -----CCCCCEEEEEEEECSSCEEEEEECC-SSCCCEEEEEEEESSSSSCCEEEEECTTCC-EEEECSCCSSCEEEEEEE
T ss_pred EeeCCCCCCCCceEEEECCCCEEEEEEeCC-CCCeeEEEEEEEeCCCCCceEEEEcCCCcc-EEEeCCCCCCCEEEEEEE
Confidence 344567889999999999999999999998 578999999999876555566666766676 999999999999999999
Q ss_pred EEeCCCCcccceeeeeccC--CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCc
Q psy4956 164 SVYDSKESVAYTSRNFTTK--PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPA 241 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t~--p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~ 241 (361)
|.+..+.+.+. ...+++. +.+|.++.+...+.+++.|+|+++ .+.+.+|.|.|...++........ .....
T Consensus 93 a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p--~~~~~~Y~v~~~~~~~~~~~~~~~----~~~~~ 165 (290)
T 3r8q_A 93 ALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATETTITISWRTK--TETITGFQVDAVPANGQTPIQRTI----KPDVR 165 (290)
T ss_dssp EEETTEECCCE-EEEEECCCCCCCCEEEEEEEECSSCEEEEEECC--SCCCCEEEEEEEESSSCCCEEEEE----CTTCS
T ss_pred EEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCCCeEEEEEeCC--CCcccEEEEEEEECCCCcceEEec----CCCcc
Confidence 99998888764 3344443 678899999999999999999987 467899999998766544322111 23458
Q ss_pred EEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCC
Q psy4956 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRP 321 (361)
Q Consensus 242 ~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~ 321 (361)
.+.+.+|.|++.|.|+|.|.+..|.+.+......+.|.+|.+|.+ ...+.+++.|+|.+|.+ .+.+|.|.|...+.
T Consensus 166 ~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~~l~~--~~~~~~sv~l~W~~p~~--~~~~Y~v~~~~~~~ 241 (290)
T 3r8q_A 166 SYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRF--LATTPNSLLVSWQPPRA--RITGYIIKYEKPGS 241 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE--EEEETTEEEEEEECCSS--CCCEEEEEEECTTS
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCCccEE--EeeCCCEEEEEEeCCCC--cccEEEEEEEeCCC
Confidence 899999999999999999999999999988888999999999999 78899999999999987 89999999998754
Q ss_pred CCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 322 GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
... ..........+++.+.+ |.||+.|.|+|+|+++.
T Consensus 242 ~~~-~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~~~~ 278 (290)
T 3r8q_A 242 PPR-EVVPRPRPGVTEATITG-LEPGTEYTIYVIALKNN 278 (290)
T ss_dssp CCE-ECSSCCCTTCCEEEECS-CCTTCEEEEEEEEEETT
T ss_pred Ccc-eeEeccCCCccEEEECC-CCCCCEEEEEEEEEeCC
Confidence 221 11122335667999986 99999999999999864
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-32 Score=228.44 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=202.8
Q ss_pred CCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEE
Q psy4956 7 GVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86 (361)
Q Consensus 7 ~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~ 86 (361)
..+...|.|+.|. +.+.+|+|+|+....... ...+......+++.|.+|.|++.|.|+|+|.++. +.+.+....+
T Consensus 27 ~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~-g~s~~~~~~~ 101 (283)
T 1tdq_A 27 SDTVAFVEWTPPR---AKVDFILLKYGLVGGEGG-KTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGT-NESDASSTQF 101 (283)
T ss_dssp CSSCEEEEEECCS---SCCSEEEEEEEESSSSCC-CEEEEECTTCSEEEECSCCTTCEEEEEEEEEETT-EECCCEEEEE
T ss_pred CCCeEEEEEECCC---CceeEEEEEEEEecCCCC-cEEEEeCCCCCEEEecCCCCCCEEEEEEEEECCC-CCCCCeeEEE
Confidence 4556677777776 789999999976433221 2333334458999999999999999999999987 4455667788
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCC---CCceEEEcCCCCCcEEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN---PPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~---~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
.+.|.+|.++.+...+.+++.|+|++|. +.+.+|.|+|+..++. ..+...+... .. .+.|.+|.|++.|.|+|+
T Consensus 102 ~t~p~~P~~l~~~~~~~~sv~l~W~~p~-~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~ 178 (283)
T 1tdq_A 102 TTEIDAPKNLRVGSRTATSLDLEWDNSE-AEAQEYKVVYSTLAGE-QYHEVLVPKGIGPTT-KTTLTDLVPGTEYGVGIS 178 (283)
T ss_dssp ECCCCCCEEEEEEEECSSCEEEEEECCS-SCCSEEEEEEEETTCC-CCEEEEEECCSSSEE-EEEECSCCTTCEEEEEEE
T ss_pred ECCCCCCCceEEEecCCCeEEEEecCCC-CCccEEEEEEEeCCCC-cceEEECCCCCcccc-eEEEecCCCCCEEEEEEE
Confidence 8899999999999999999999999985 7889999999887543 3345555555 55 899999999999999999
Q ss_pred EEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEE
Q psy4956 164 SVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA 243 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (361)
|.+..+.+.+ ......+.|.+|.++.+...+.+++.|+|+++ .+.+.+|.|.|...++........ ...+.+
T Consensus 179 A~n~~g~s~~-~~~~~~t~~~~P~~l~~~~~~~~sv~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~ 250 (283)
T 1tdq_A 179 AVMNSKQSIP-ATMNARTELDSPRDLMVTASSETSISLIWTKA--SGPIDHYRITFTPSSGISSEVTVP-----RDRTSY 250 (283)
T ss_dssp EEETTEECCC-EEEEEECCCCCCEEEEEEEECSSCEEEEEECC--CSCCSEEEEEEECSSSCCEEEEEE-----SSCSEE
T ss_pred EEeCCCCCcc-eEEEecCCCCCCCccEEeEecCCEEEEEEeCC--CCcccEEEEEEEcCCCCeeEEEeC-----CCccEE
Confidence 9999888765 44555666778999999999999999999986 477899999999876544333232 335889
Q ss_pred EecCCCCCCeEEEEEEEEeCCCCCCceEEEEec
Q psy4956 244 AFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT 276 (361)
Q Consensus 244 ~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t 276 (361)
.+.+|.|++.|.|+|+|.++.|.+.+..+.+.|
T Consensus 251 ~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~a~T 283 (283)
T 1tdq_A 251 TLTDLEPGAEYIISITAERGRQQSLESTVDAFT 283 (283)
T ss_dssp EECCCCTTCCEEEEEEEEETTEECCCEEEEEC-
T ss_pred EECCCCCCCEEEEEEEEEcCCCCCcceeeEecC
Confidence 999999999999999999999999888876654
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=261.55 Aligned_cols=335 Identities=13% Similarity=0.103 Sum_probs=230.4
Q ss_pred CCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEE-eecCccceEEecCCCCCceEEEEEEEecCCcCc--cc-eee
Q psy4956 8 VHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTY-VSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHD--WL-TWT 83 (361)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~--~~-~~~ 83 (361)
.+...|.|+.|...++.+.+|+|+|+...+..+..... ......+++.|.+|.|++.|.|+|+|.+..|.+ +. +..
T Consensus 214 ~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~ 293 (589)
T 3l5h_A 214 SSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEE 293 (589)
T ss_dssp TTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCC
T ss_pred CCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCc
Confidence 34556677767776778999999999865433211111 112236899999999999999999998865332 11 123
Q ss_pred EEEecCCC----CCCccEEE----EEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcC
Q psy4956 84 ASITTPPD----PPTNLSVN----VRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151 (361)
Q Consensus 84 ~~~~t~~~----~p~~l~~~----~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 151 (361)
..+.+.+. +|..+... ..+.+++.|+|+++. ++.+.+|+|.|+..+.. +. .+..... .+.+
T Consensus 294 ~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~-~~---~~~~~~~-~~~~-- 366 (589)
T 3l5h_A 294 ASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH-LQ---NYTVNAT-KLTV-- 366 (589)
T ss_dssp BCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSC-CC---BCCCSSS-CCEE--
T ss_pred cccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCC-ce---eeccCCc-eEEE--
Confidence 33445433 34433322 345689999999743 56789999998664432 21 1222233 4444
Q ss_pred CCCCcEEEEEEEEEeCCCCcccceeeeecc---CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCce
Q psy4956 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTT---KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV 228 (361)
Q Consensus 152 L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t---~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~ 228 (361)
|.+++.|.|+|.|.+..|.+.++....... .|.++.++.+... .+++.|+|+++. ..+.+|.|.|...+.....
T Consensus 367 l~~~~~Y~~~V~A~n~~G~~~~s~~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~--~~i~~Y~v~~~~~~~~~~~ 443 (589)
T 3l5h_A 367 NLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPR--ESVKKYILEWCVLSDKAPC 443 (589)
T ss_dssp CCCSSCCCEEEEEEBTTBCCCCCCCCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCS--SCCSCBCCEEEEECSSSCC
T ss_pred EeCCCCEEEEEEEEeCCccCCCeEEEeecccccCCCCcceEEEEEC-CCeEEEEEECCC--CCccEEEEEEEECCCCCCC
Confidence 889999999999999998886543222222 2445567887755 689999999874 3788999999876553221
Q ss_pred -eEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecC---CCCCccceEEeeecCCceEEEEeeCCC
Q psy4956 229 -LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTI---PLRPLSFTYDKASITSNSLRVVWEPPK 304 (361)
Q Consensus 229 -~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~---~~~p~~l~~~~~~~~~~si~l~W~~~~ 304 (361)
..... ........+.+.+|.|++.|.|+|+|.+..|.+.+....+.+. |.+|.++.+ ..++.+++.|+|+++.
T Consensus 444 ~~~~~~-~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~~~~~t~~~~P~~pp~l~~--~~~~~~sv~l~W~~~~ 520 (589)
T 3l5h_A 444 ITDWQQ-EDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRT--KKVGKNEAVLEWDQLP 520 (589)
T ss_dssp CEEECC-BCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCEEEEEESSCCCCSSCCCCCE--ECCCSSCBEEBCCCCC
T ss_pred ccCcEE-eeCCcceEEehhccccCcEEEEEEEEEeCCcccCCEEEEEEeccCCCCCCCeEEE--eecccceEEEEecCCC
Confidence 11111 1122335566799999999999999999998887776666664 444567888 7889999999999853
Q ss_pred ---CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 305 ---GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 305 ---~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
+.+.+.+|.|.|...++... ........+++++.+ |+||+.|.|+|+|.+.
T Consensus 521 ~~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~~~~~~~~~~-L~p~t~Y~~~V~A~n~ 574 (589)
T 3l5h_A 521 VDVQNGFIRNYTIFYRTIIGNET---AVNVDSSHTEYTLSS-LTSDTLYMVRMAAYTD 574 (589)
T ss_dssp HHHHCSCEEEEEECCBCSSCCCC---CEEECTTCCBCCBCS-CCSSCCEECCEEEEET
T ss_pred HHHcCccceeEEEEEEeCCCCeE---EEEeCCcccEEEecC-CCCCCEEEEEEEEEeC
Confidence 12389999999987754322 233456778999996 9999999999999985
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=232.76 Aligned_cols=260 Identities=22% Similarity=0.398 Sum_probs=207.5
Q ss_pred CCCCCCccEEEEEeCC-EEEEEeeCCCCCCcccEEEEEEECCCCCC-CeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGK-TAQIFWSPPISGKYSGFKLKVISLSEKTP-PRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~-~v~l~W~~p~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
+|.+|.++.+...+.+ ++.|+|++|.++.+.+|+|+|+..++..+ .....+..... ++.|.+|.|++.|.|+|+|.+
T Consensus 1 Pp~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~ 79 (368)
T 1fnf_A 1 PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQS-SCTFDNLSPGLEYNVSVYTVK 79 (368)
T ss_dssp CCCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEEECTTCC-EEECCCCCTTSCEEEEEEEEE
T ss_pred CCCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEEecCCcC-EEEECCCCCCCEEEEEEEEEc
Confidence 4788999999988776 69999999876789999999988654322 23344555666 999999999999999999999
Q ss_pred CCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEec
Q psy4956 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK 246 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
..+.+.+. .....+.+.+|.+|.+...+.+++.|+|+++. .+.+.+|.|.|...++......... ......+.+.
T Consensus 80 ~~g~s~~~-~~~~~~~~~~p~~l~~~~~~~~si~l~W~~p~-~~~~~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~ 154 (368)
T 1fnf_A 80 DDKESVPI-SDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPP-SIDLTNFLVRYSPVKNEEDVAELSI---SPSDNAVVLT 154 (368)
T ss_dssp TTEECCCE-EEEECCCCCCCEEEEEESCCSSCEEEEEECCT-TCCCSEEEEEEEETTCTTCCEEEEE---CTTCCEEEEC
T ss_pred CCCccCce-eeeecCCCcCCceeEEEEcCCCeEEEEeeCCC-CCCCcEEEEEEEECCCCCccEEEEc---CCCcceEEec
Confidence 98887653 33344555688999999889999999999873 4678999999987655432221111 2345789999
Q ss_pred CCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCC
Q psy4956 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASST 326 (361)
Q Consensus 247 ~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~ 326 (361)
+|.|++.|.|+|+|.+..|.+.+......+.+.+|.+|.+ ...+.+++.|+|+++.+ .+.+|.|.|...+.....
T Consensus 155 ~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~P~~l~~--~~~~~~sv~l~W~~p~~--~i~~Y~v~~~~~~~~~~~- 229 (368)
T 1fnf_A 155 NLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDF--SDITANSFTVHWIAPRA--TITGYRIRHHPEHFSGRP- 229 (368)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEE--ESCCSSEEEEEEECCSS--CCSEEEEEEECSCCSSCC-
T ss_pred CCCCCCEEEEEEEEEeCCCCCCCeEeeecCCCCCCCccEE--EEccCCEEEEEEeCCCC--CcCEEEEEEecCCCCCCc-
Confidence 9999999999999999999888888888888889999999 78899999999999887 899999999877542222
Q ss_pred ceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.........+++.+.+ |.||+.|.|+|+|.++.
T Consensus 230 ~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~~ 262 (368)
T 1fnf_A 230 REDRVPHSRNSITLTN-LTPGTEYVVSIVALNGR 262 (368)
T ss_dssp EEEEEETTCCEEEEES-CCTTCEEEEEEEEEETT
T ss_pred cEEEeCCCcCEEEECC-CCCCCEEEEEEEEEeCC
Confidence 2233455677999986 99999999999999864
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-31 Score=222.45 Aligned_cols=257 Identities=21% Similarity=0.365 Sum_probs=200.6
Q ss_pred eCCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEE
Q psy4956 6 HGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS 85 (361)
Q Consensus 6 ~~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~ 85 (361)
...+...|.|+.| .+.+.+|+|+|+..++... ...+....+.++++|.+|.|++.|.|+|+|.++.|.+. .....
T Consensus 32 ~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~-~s~~~ 106 (290)
T 3r8q_A 32 VTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGP-MKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSR-PAQGV 106 (290)
T ss_dssp ECSSCEEEEEECC---SSCCCEEEEEEEESSSSSC-CEEEEECTTCCEEEECSCCSSCEEEEEEEEEETTEECC-CEEEE
T ss_pred CCCCEEEEEEeCC---CCCeeEEEEEEEeCCCCCc-eEEEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCCCC-Cccee
Confidence 3455566777766 3589999999998553222 34444444578999999999999999999998774443 33445
Q ss_pred Eec--CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 86 ITT--PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 86 ~~t--~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
+.+ .+.+|.++.+...+.+++.|+|++| ++.+.+|.|.|+..++. ......+..... .+.|.+|.|++.|.|+|+
T Consensus 107 ~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p-~~~~~~Y~v~~~~~~~~-~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~ 183 (290)
T 3r8q_A 107 VTTLENVSPPRRARVTDATETTITISWRTK-TETITGFQVDAVPANGQ-TPIQRTIKPDVR-SYTITGLQPGTDYKIYLY 183 (290)
T ss_dssp EECCCCCCCCEEEEEEEECSSCEEEEEECC-SCCCCEEEEEEEESSSC-CCEEEEECTTCS-EEEECSCCTTCEEEEEEE
T ss_pred EecCCCCCCCceeEEEEcCCCeEEEEEeCC-CCcccEEEEEEEECCCC-cceEEecCCCcc-EEEECCCCCCCEEEEEEE
Confidence 555 3678899999999999999999997 57899999999886543 334445556666 999999999999999999
Q ss_pred EEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEE
Q psy4956 164 SVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA 243 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (361)
|.+..+.+.+ ......+.|.+|.++.+...+.+++.|+|.++ .+.+.+|.|.|...++..... ........+.+
T Consensus 184 A~n~~g~s~~-~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p--~~~~~~Y~v~~~~~~~~~~~~---~~~~~~~~~~~ 257 (290)
T 3r8q_A 184 TLNDNARSSP-VVIDASTAIDAPSNLRFLATTPNSLLVSWQPP--RARITGYIIKYEKPGSPPREV---VPRPRPGVTEA 257 (290)
T ss_dssp EEETTEECCC-EEEEEECCCCCCEEEEEEEEETTEEEEEEECC--SSCCCEEEEEEECTTSCCEEC---SSCCCTTCCEE
T ss_pred EEeCCcccCC-EEEEecCCCCCCCccEEEeeCCCEEEEEEeCC--CCcccEEEEEEEeCCCCccee---EeccCCCccEE
Confidence 9999888866 44556677889999999989999999999987 367899999999876544321 11113456899
Q ss_pred EecCCCCCCeEEEEEEEEeCCCCCCceEEEEec
Q psy4956 244 AFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT 276 (361)
Q Consensus 244 ~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t 276 (361)
.+.+|.|++.|.|+|+|.+..|.+.+....++|
T Consensus 258 ~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T 290 (290)
T 3r8q_A 258 TITGLEPGTEYTIYVIALKNNQKSEPLIGRKKT 290 (290)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred EECCCCCCCEEEEEEEEEeCCCcCCccccccCC
Confidence 999999999999999999999999888876654
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=255.98 Aligned_cols=303 Identities=15% Similarity=0.159 Sum_probs=188.6
Q ss_pred CCceEEEEecCC-CCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEe--cCCcCccceeeE
Q psy4956 8 VHGANLVIKIPE-NLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYT--NSTVHDWLTWTA 84 (361)
Q Consensus 8 ~~~~~l~~~~p~-~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~--~~~~~~~~~~~~ 84 (361)
.....|.|.+|. +.++++.+|.|+|+...+. ...+... ...+++|.+|.|++.|.|+|+|. |..|.+..+...
T Consensus 275 ~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~---~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~ 350 (731)
T 2v5y_A 275 ATYLWIQLNANSINGDGPIVAREVEYCTASGS---WNDRQPV-DSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPAL 350 (731)
T ss_dssp SSCEEEECCCSSBSSCSCCCEEEEEEEESSSS---CEEEEEC-CSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCE
T ss_pred CceEEEEeCCcccCCCCccEEEEEEEEECCCC---ceEEecc-CcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcE
Confidence 344556666554 3447899999999985432 2222222 25899999999999999999999 876444433334
Q ss_pred EEecC----CCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCC--e--EEeecCCCCceEEEcCC
Q psy4956 85 SITTP----PDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPP--R--IIGFTENPPAGYSLKDL 152 (361)
Q Consensus 85 ~~~t~----~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~L 152 (361)
.+.+. +.+|.++.+...+.+++.|+|++|. ++.+.+|.|.|+......+. . ...+..... .+.|.+|
T Consensus 351 ~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L 429 (731)
T 2v5y_A 351 RTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHP-QHTITNL 429 (731)
T ss_dssp EEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSC-EEEECSC
T ss_pred EeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcc-eEEECCC
Confidence 45443 4678899999999999999999986 45677999999876532221 1 123334455 8999999
Q ss_pred CCCcEEEEEEEEEeCCCCcccceeeeeccC---CCCC--cceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCC
Q psy4956 153 TPGGSYQVQLFSVYDSKESVAYTSRNFTTK---PNTP--GKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPE 226 (361)
Q Consensus 153 ~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~---p~~p--~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~ 226 (361)
.|++.|.|+|+|.+..|.+. +....++|. |.+| .++.... ..+++.|+|++|.. .+.+.+|.|.|+......
T Consensus 430 ~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~ 507 (731)
T 2v5y_A 430 SPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQTYGVITLYEITYKAVSSFD 507 (731)
T ss_dssp CSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC
T ss_pred CCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCCCCCCccceEEEEEECcCCC
Confidence 99999999999999888764 444555554 4443 3555543 46799999997743 378999999998654321
Q ss_pred -------ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCCCccc---eEEeeecCCceE
Q psy4956 227 -------SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRPLSF---TYDKASITSNSL 296 (361)
Q Consensus 227 -------~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p~~l---~~~~~~~~~~si 296 (361)
...... .....+.+.+.+|.|++.|.|+|+|.+..|.+.+....+.|.+.+|... .......+.+++
T Consensus 508 ~~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~~P~~p~~~~~~~~~~~~~si 584 (731)
T 2v5y_A 508 PEIDLSNQSGRVS---KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTV 584 (731)
T ss_dssp ---CCCCCEEEEE---EETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEEEEEEECCCCCCCC----------------
T ss_pred ccccccCcceEEe---ecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCcccEEEcCCCCCCCCCcccccccccCCceE
Confidence 111111 1233578999999999999999999999998888877777876655432 221135677899
Q ss_pred EEEeeCCCC-CCCceeEEEEEEECC
Q psy4956 297 RVVWEPPKG-FSEFDKYQVSINVRR 320 (361)
Q Consensus 297 ~l~W~~~~~-~~~~~~y~i~~~~~~ 320 (361)
.|+|.+|.. .+.+.+|.|.|...+
T Consensus 585 ~l~W~pp~~~~g~I~~Y~v~~~~~~ 609 (731)
T 2v5y_A 585 TVMLKPAHSRGAPVSVYQIVVEEER 609 (731)
T ss_dssp -------------------------
T ss_pred EEEEeCCCCCCCceEEEEEEEEecC
Confidence 999998743 247999999888765
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-30 Score=227.93 Aligned_cols=263 Identities=19% Similarity=0.234 Sum_probs=207.1
Q ss_pred EEeCCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceee
Q psy4956 4 IVHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWT 83 (361)
Q Consensus 4 ~~~~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~ 83 (361)
.+.......+.++|....++.+.+|+|+|+..++... ..........+++.|.+|.|++.|.|+|+|.+..| .+....
T Consensus 103 ~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-~s~~s~ 180 (375)
T 3t1w_A 103 SFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIP-IFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGG-ESAPTT 180 (375)
T ss_dssp EEECCCSSEEEEECCCCCCTTEEEEEEEEEESSSCCS-CEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTE-ECCCEE
T ss_pred EEEecCCCeEEEEEECCCCCCceEEEEEEEECCCCCc-eeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCc-ccCCee
Confidence 3444455556666654445789999999998544322 23333334478999999999999999999999874 445555
Q ss_pred EEEecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 84 ~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
....+.+.+|.++.+...+.+++.|+|++|..+.+.+|+|+|+..+.........+..... .+.+.+|.|++.|.|+|+
T Consensus 181 ~~~~t~~~~p~~l~~~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~ 259 (375)
T 3t1w_A 181 LTQQTAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDN-AVVLTNLLPGTEYVVSVS 259 (375)
T ss_dssp EEEECCCCCCEEEEEESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEEEEECTTCC-EEEECSCCTTCEEEEEEE
T ss_pred eeeecCCCCCceeEEEecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEEEEcCCCcC-EEEeCCCCCCCEEEEEEE
Confidence 6677777799999998888999999999987778999999999876545556666666666 999999999999999999
Q ss_pred EEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC-CCc-eeEEeeccCCCCCc
Q psy4956 164 SVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA-PES-VLYVEKEGEPPGPA 241 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~-~~~-~~~~~~~~~~~~~~ 241 (361)
|.+..+.+.+ ......+.|.+|.++.+...+.+++.|+|+++ .+.+.+|.|.|...+. ... ..... ...+
T Consensus 260 A~~~~g~s~~-~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p--~~~~~~Y~v~~~~~~~~~~~~~~~~~-----~~~~ 331 (375)
T 3t1w_A 260 SVYEQHESTP-LRGRQKTGLDSPTGIDFSDITANSFTVHWIAP--RATITGYRIRHHPEHFSGRPREDRVP-----HSRN 331 (375)
T ss_dssp EEETTEECCC-EEEEEECCCCCCEEEEEESCCSSCEEEEEECC--SSCCSEEEEEEEETTCCSSCEEEEEE-----TTCC
T ss_pred EEcCCCcCCc-eeeEEecCCCCCCccEeeeccCCEEEEEECCC--CcceeeEEEEEEECCCCCcceeEEcC-----CCcc
Confidence 9999888865 44556677889999999988999999999987 4788999999988765 222 22222 2358
Q ss_pred EEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecC
Q psy4956 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTI 277 (361)
Q Consensus 242 ~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~ 277 (361)
.+.+.+|.|++.|.|+|+|.+..|.+++....+.+.
T Consensus 332 ~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 332 SITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 899999999999999999999999999888766554
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-31 Score=245.15 Aligned_cols=333 Identities=13% Similarity=0.124 Sum_probs=225.1
Q ss_pred CCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEec-CCCCCceEEEEEEEecCCcCccceeeEEE
Q psy4956 8 VHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS-EGLPGTKYDFYLYYTNSTVHDWLTWTASI 86 (361)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~-~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~ 86 (361)
.....+.|..+.+. +.+.+|.|.|+...+.. ..-........++.+. +|.+++.|.|+|.|.|..|.. .+....+
T Consensus 116 ~~~~~~~W~~~~~~-~~~~~y~l~~~~~~~~~--~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~-~s~~~~~ 191 (589)
T 3l5h_A 116 GKKMRCEWDGGRET-HLETNFTLKSEWATHKF--ADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKV-TSDHINF 191 (589)
T ss_dssp TSCEEEEEECCSCC-SSCEEEEECCBCSSSBC--CCEECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCB-CCCCEEE
T ss_pred CceEEEEECCCCcC-CcCceEEEEEEEcCCCc--ccCCCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCc-ccccEEE
Confidence 34556666666543 56899999987744321 1111122235778888 899999999999999977543 2222333
Q ss_pred e----cCCCCCCccEEE--EEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEE--eecCCCCceEEEcCCCCCc
Q psy4956 87 T----TPPDPPTNLSVN--VRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRII--GFTENPPAGYSLKDLTPGG 156 (361)
Q Consensus 87 ~----t~~~~p~~l~~~--~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~~ 156 (361)
. ..|.+|.++.+. ..+.+++.|+|++|. ++.+.+|+|+|+..+...|.... ....... .+.+.+|.|++
T Consensus 192 ~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~-~~~i~~L~p~t 270 (589)
T 3l5h_A 192 DPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRS-SFTVQDLKPFT 270 (589)
T ss_dssp CGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTTSSCSCCS-EEEECSCCSSC
T ss_pred ccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccccCcCcee-EEEECCCCCCC
Confidence 2 258899999884 457889999999876 45678899999987644443221 1122334 89999999999
Q ss_pred EEEEEEEEEeCCCCccc---ceeeeeccC---C-CCCcceEEE----eccCCeEEEEeecCC---CCCcceEEEEEEeCC
Q psy4956 157 SYQVQLFSVYDSKESVA---YTSRNFTTK---P-NTPGKFIVW----FRNETTLLVLWQPSY---PASIYTHYKVSIDPP 222 (361)
Q Consensus 157 ~Y~v~v~a~~~~~~s~~---~~~~~~~t~---p-~~p~~l~~~----~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~ 222 (361)
.|.|+|+|.+..|.+.+ +....+.|. | .+|..+... ..+.+++.|.|+++. ..+.+.+|.|.|...
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~ 350 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRW 350 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCT
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecC
Confidence 99999999997765432 334444554 3 344444432 346679999998632 237889999999765
Q ss_pred CCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecC----CCCCccceEEeeecCCceEEE
Q psy4956 223 DAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTI----PLRPLSFTYDKASITSNSLRV 298 (361)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~----~~~p~~l~~~~~~~~~~si~l 298 (361)
+..... . ......+.+ |.+++.|.|+|.|.+..|.+.+....+.+. +.+|.++.+ ... .+++.|
T Consensus 351 ~~~~~~--~-----~~~~~~~~~--l~~~~~Y~~~V~A~n~~G~~~~s~~~~~~~~~~~~~p~~~l~~--~~~-~~si~l 418 (589)
T 3l5h_A 351 KSHLQN--Y-----TVNATKLTV--NLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKA--FPK-DNMLWV 418 (589)
T ss_dssp TSCCCB--C-----CCSSSCCEE--CCCSSCCCEEEEEEBTTBCCCCCCCCCCCTTCCCCSCCCSCEE--EEC-SSSEEE
T ss_pred CCCcee--e-----ccCCceEEE--EeCCCCEEEEEEEEeCCccCCCeEEEeecccccCCCCcceEEE--EEC-CCeEEE
Confidence 543221 1 111233444 889999999999999999887766544443 334567777 443 689999
Q ss_pred EeeCCCCCCCceeEEEEEEECCCCCCC-Cceeec-CCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 299 VWEPPKGFSEFDKYQVSINVRRPGASS-TPITKS-RDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 299 ~W~~~~~~~~~~~y~i~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
+|++|.+ .+.+|.|+|...+..... ...... ......+.+.+ |.|++.|.|+|+|+++.
T Consensus 419 ~W~~p~~--~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~p~t~Y~~~V~A~~~~ 479 (589)
T 3l5h_A 419 EWTTPRE--SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGN-LAESKCYLITVTPVYAD 479 (589)
T ss_dssp ECCCCSS--CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSC-CCSSSEEEEEECBEETT
T ss_pred EEECCCC--CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhc-cccCcEEEEEEEEEeCC
Confidence 9999976 889999999987653221 111122 23334566665 99999999999998863
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-28 Score=230.80 Aligned_cols=345 Identities=11% Similarity=0.076 Sum_probs=238.9
Q ss_pred EEeCCCceEEEEecCCCCCCCcceEEEEEEc-CCCCCCCCeE-Eeec--CccceEEecCCCCCceEEEEEEEecCCcC-c
Q psy4956 4 IVHGVHGANLVIKIPENLSSDNSTYRLDYIP-AHGHPPPNTT-YVSR--DIKDNIEFSEGLPGTKYDFYLYYTNSTVH-D 78 (361)
Q Consensus 4 ~~~~~~~~~l~~~~p~~~~~~~~~Y~v~~~~-~~~~~~~~~~-~~~~--~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~-~ 78 (361)
.+.....+.|.+...+.+...+. .|.. .+|....... .... .....+.|.+|.+...|.++++|.|..|. .
T Consensus 175 ~v~~G~~v~l~C~~~g~P~p~i~----~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~ 250 (731)
T 2v5y_A 175 EVNAGQFATFQCSAIGRTVAGDR----LWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGI 250 (731)
T ss_dssp EEETTSCEEEEEEEESCCCTTCE----EEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEE
T ss_pred EEeCCCcEEEEEEeCCCCCCcee----EEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcc
Confidence 34445556676766555544432 1321 2443211111 1111 12368999999999999999999998755 4
Q ss_pred cceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCC
Q psy4956 79 WLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPG 155 (361)
Q Consensus 79 ~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 155 (361)
+....+.+...|.+|..+.+...+.+++.|+|.++. ++++.+|.|+|+..+. .+.... . .... .+.|.+|.|+
T Consensus 251 s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~-~~~~~~-~-~~~~-~~~i~~L~p~ 326 (731)
T 2v5y_A 251 SNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASG-SWNDRQ-P-VDST-SYKIGHLDPD 326 (731)
T ss_dssp CCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSS-SCEEEE-E-CCSS-EEEECSCCTT
T ss_pred eeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCC-CceEEe-c-cCcc-eEEEeCCCCC
Confidence 555567777888888888888888999999999864 3568899999988532 343222 2 2345 8999999999
Q ss_pred cEEEEEEEEE--eCCCCcccceeeeeccC----CCCCcceEEEeccCCeEEEEeecCCC---CCcceEEEEEEeCCCCCC
Q psy4956 156 GSYQVQLFSV--YDSKESVAYTSRNFTTK----PNTPGKFIVWFRNETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPE 226 (361)
Q Consensus 156 ~~Y~v~v~a~--~~~~~s~~~~~~~~~t~----p~~p~~l~~~~~~~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~ 226 (361)
+.|.|+|.|. +..|.+.++....+.+. |.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|+......
T Consensus 327 t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~ 406 (731)
T 2v5y_A 327 TEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQ 406 (731)
T ss_dssp CEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSS
T ss_pred CEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCC
Confidence 9999999999 88888765544444443 36788999999999999999998732 245679999998765332
Q ss_pred ceeEEe-eccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCCC---c--cceEEeeecCCceEEEEe
Q psy4956 227 SVLYVE-KEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLRP---L--SFTYDKASITSNSLRVVW 300 (361)
Q Consensus 227 ~~~~~~-~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p---~--~l~~~~~~~~~~si~l~W 300 (361)
...... ..........+.+.+|.|++.|.|+|.|.|..|.+.+..+.+.|...+| . .+.. .. ..+++.|+|
T Consensus 407 ~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~~~P~~p~~~~~~~--~~-~~~si~l~W 483 (731)
T 2v5y_A 407 EQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQG--ST-FEEKIFLQW 483 (731)
T ss_dssp EEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCCCCCCCCCTTTCEE--EE-ETTEEEEEC
T ss_pred CccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccCCCCCCCCcceEEe--ee-cCCeEEEEE
Confidence 211111 1122455688999999999999999999998887655556666654433 2 3444 32 467999999
Q ss_pred eCCCC-CCCceeEEEEEEECCCCCC------CCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 301 EPPKG-FSEFDKYQVSINVRRPGAS------STPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 301 ~~~~~-~~~~~~y~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
++|.. .+.+.+|.|.|........ ...........+++++.+ |+|++.|.|+|+|.+..
T Consensus 484 ~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~~ 549 (731)
T 2v5y_A 484 REPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFG-LYPGTTYSFTIRASTAK 549 (731)
T ss_dssp CCCSCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECS-CCTTEEEEEEEEEEETT
T ss_pred cCCCCCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecC-CCCCCEEEEEEEEEeCC
Confidence 98742 2489999999988653211 111123345667999996 99999999999999853
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=230.11 Aligned_cols=304 Identities=15% Similarity=0.131 Sum_probs=205.2
Q ss_pred ceEEEEecCCCCCCCcceEEEEEEcC-CC---CC-CCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCcccee--
Q psy4956 10 GANLVIKIPENLSSDNSTYRLDYIPA-HG---HP-PPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTW-- 82 (361)
Q Consensus 10 ~~~l~~~~p~~~~~~~~~Y~v~~~~~-~~---~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~-- 82 (361)
...|.|+.|...++++.+|+|+|+.. ++ .. ..........+.++++|.+|.|++.|.|+|+|.+..|.+..+.
T Consensus 287 sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 366 (680)
T 1zlg_A 287 TVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAK 366 (680)
T ss_pred EEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCc
Confidence 67778887887788999999999832 11 11 1122233333468999999999999999999998764443222
Q ss_pred -eEEEecCCCC--CCccEEEEEeCCEEEE-----------EeeCCC-CCCcccEEEEEEECCCCC---------------
Q psy4956 83 -TASITTPPDP--PTNLSVNVRSGKTAQI-----------FWSPPI-SGKYSGFKLKVISLSEKT--------------- 132 (361)
Q Consensus 83 -~~~~~t~~~~--p~~l~~~~~~~~~v~l-----------~W~~p~-~~~~~~y~v~~~~~~~~~--------------- 132 (361)
.+.+.|...+ |.++.+...+.+++.| +|.+|. ++.+.+|+|.|...+...
T Consensus 367 ~~v~~~T~~~~P~p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~~~~~~y~v~w~~~~~~~v~~Y~V~w~~~~~~~ 446 (680)
T 1zlg_A 367 VSLHFTSTHATNNKEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAH 446 (680)
T ss_pred eeEEEECCCCCCCccccccccccCccccccccccCCCccccccCCcccCCcceEEEEEeCCCCCccceEEEEEeeeeccc
Confidence 2555554333 5677777777888876 999884 334567888886644221
Q ss_pred ----CCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeecc--------------------------C
Q psy4956 133 ----PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT--------------------------K 182 (361)
Q Consensus 133 ----~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t--------------------------~ 182 (361)
+..........+ .+.|.+|.|++.|.|+|+|.+..|.+.... ..+.+ .
T Consensus 447 ~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~~-~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v 524 (680)
T 1zlg_A 447 NRTTGSEASSGMTHEN-YIILQDLSFSCKYKVTVQPIRPKSHSKAEA-VFFTTPPCSALKGKSHKPIGCLGEAGHVLSKV 524 (680)
T ss_pred CCCCcceeeeeeccCc-eEEecCCCCCCeEEEEEEEecCCCCCCccc-cceeCCCccccccCCccccccCCCCccccccc
Confidence 001112233444 899999999999999999999887543111 00000 1
Q ss_pred CCCCcc----eEEEeccCCeEEEEeecCCC--CCcceEEEEEEeCCCCCCc-----e-eEEeeccCCCCCcEEEecCCCC
Q psy4956 183 PNTPGK----FIVWFRNETTLLVLWQPSYP--ASIYTHYKVSIDPPDAPES-----V-LYVEKEGEPPGPAQAAFKGLVP 250 (361)
Q Consensus 183 p~~p~~----l~~~~~~~~~~~v~W~~~~~--~~~~~~y~v~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~L~p 250 (361)
+.+|.+ +.+...+.+ +.|+|+++.. .+.+.+|.|.|........ . ........++..+.+.|.+|.|
T Consensus 525 ~~~P~~l~~~v~v~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 603 (680)
T 1zlg_A 525 LAKPENLSASFIVQDVNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRP 603 (680)
T ss_pred cCCccccceeEEEeccCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCC
Confidence 256777 666666655 9999998753 4789999999986532211 0 1111111234568899999999
Q ss_pred CCeEEEEEEEEeCCCCCCceEEEEecCC---CCCccceEEeeecCCceEEEEeeCCCC--CCCceeEEEEEEECCCC
Q psy4956 251 GRAYNISVQTVSEDEISTPTTAQYRTIP---LRPLSFTYDKASITSNSLRVVWEPPKG--FSEFDKYQVSINVRRPG 322 (361)
Q Consensus 251 ~t~Y~v~V~a~~~~~~s~~~~~~~~t~~---~~p~~l~~~~~~~~~~si~l~W~~~~~--~~~~~~y~i~~~~~~~~ 322 (361)
++.|.|+|+|.+..|.+......+.|.. .+|.++.+ .... .|+|++|.. ...|.+|.+.|...+.+
T Consensus 604 ~t~Y~~~V~A~n~~G~G~~~~~~~~T~~~~P~~P~~l~v--~~~~----~l~W~pP~~~~G~~I~~~~~~~~~~~~~ 674 (680)
T 1zlg_A 604 STLYRLEVQVLTPGGEGPATIKTFRTPELPPSSAHRSHL--KHRH----PHHYKPSPERYGKPIPNPLLGLDSTRTG 674 (680)
T ss_pred CceEEEEEEEEcCCCcCCCcceEEECCCCCCCCCCCCeE--Eecc----ceeECCCCCCCCCccceeeEEEeecccc
Confidence 9999999999998888877555666654 44566777 4433 899999742 35899999999887654
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-28 Score=207.92 Aligned_cols=254 Identities=12% Similarity=0.105 Sum_probs=183.5
Q ss_pred CCCCCCccEEEEEe-----CCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEE
Q psy4956 89 PPDPPTNLSVNVRS-----GKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQ 159 (361)
Q Consensus 89 ~~~~p~~l~~~~~~-----~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 159 (361)
.|..|.++...... .+++.|+|+++. ++.+.+|.|+|+..+.. .+.... + ...+.+|.|++.|.
T Consensus 3 ~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~--~~~~~~----~-~~~~~~l~p~t~Y~ 75 (290)
T 3l5i_A 3 RPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH--LQNYTV----N-ATKLTVNLTNDRYL 75 (290)
T ss_dssp CCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSC--CEEEEE----S-SSEEEEEECSSCEE
T ss_pred CCCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcC--ceeEec----C-CcEEEEEcCCceEE
Confidence 46667777655433 589999999854 67889999999886432 222222 2 45678899999999
Q ss_pred EEEEEEeCCCCcccceeeeecc---CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCce-eEEeecc
Q psy4956 160 VQLFSVYDSKESVAYTSRNFTT---KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV-LYVEKEG 235 (361)
Q Consensus 160 v~v~a~~~~~~s~~~~~~~~~t---~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~ 235 (361)
|+|.|.+..|.+.+........ .|.++.++.+.... +++.|+|+++. ..+.+|.|.|......... ......
T Consensus 76 ~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~--~~i~~Y~v~~~~~~~~~~~~~~~~~~- 151 (290)
T 3l5i_A 76 ATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPR--ESVKKYILEWCVLSDKAPCITDWQQE- 151 (290)
T ss_dssp EEEEEEESSCBCCCEEEEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCS--SCCCEEEEEEEEECSSSCCCCEEEEE-
T ss_pred EEEEEEcCCCCCCCceEEeecccccCCCccceeEEEeCC-CeEEEEEeCCC--CCCCcEEEEEEECCCCCCCCcCeEEc-
Confidence 9999999998886644333333 24556678777654 69999999874 3789999999876543210 001110
Q ss_pred CCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEecCCCC---CccceEEeeecCCceEEEEeeCC---CCCCCc
Q psy4956 236 EPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLR---PLSFTYDKASITSNSLRVVWEPP---KGFSEF 309 (361)
Q Consensus 236 ~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~---p~~l~~~~~~~~~~si~l~W~~~---~~~~~~ 309 (361)
.......+.+.+|.|++.|.|+|+|++..|.+.+......+...+ |.++.+ ...+.+++.|+|+++ ...+.+
T Consensus 152 ~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~~~P~~~p~~~~--~~~~~~sv~l~W~~~~~~~~~g~i 229 (290)
T 3l5i_A 152 DGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQAPPSKGPTVRT--KKVGKNEAVLEWDQLPVDVQNGFI 229 (290)
T ss_dssp ETTCSEEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSCCCCSSCCCEEE--EEECSSCEEEEECCCCHHHHSSCC
T ss_pred cCCCcceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccccCCCCCCeeeE--eeccCCEEEEEEcCCChhccCCEE
Confidence 123346788899999999999999999988887766666665433 356777 788999999999954 122489
Q ss_pred eeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 310 DKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 310 ~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.+|.|.|...++. ..........+++++.+ |.||+.|.|+|+|.+.
T Consensus 230 ~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~-L~p~t~Y~~~V~A~n~ 275 (290)
T 3l5i_A 230 RNYTIFYRTIIGN---ETAVNVDSSHTEYTLSS-LTSDTLYMVRMAAYTD 275 (290)
T ss_dssp CEEEEEEEETTSC---CEEEEEETTCSEEEECS-CCTTCEEEEEEEEEET
T ss_pred EEEEEEEEeCCCC---eEEEEeCCCceEEEeCC-CCCCCEEEEEEEEEeC
Confidence 9999999987542 12233456778999996 9999999999999985
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-29 Score=219.19 Aligned_cols=324 Identities=15% Similarity=0.130 Sum_probs=152.0
Q ss_pred ceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEee--cCccceEEecCCCCCceEEEEEEEecCCcCcccee-eEEE
Q psy4956 10 GANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVS--RDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTW-TASI 86 (361)
Q Consensus 10 ~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~-~~~~ 86 (361)
...|.|+.|....+++. |.|+|+......+.....+. ......++..+|.+++.|.|+|+|.+ + ..+... ...+
T Consensus 22 ~~~L~W~p~~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A~n-~-~~S~~s~~~~~ 98 (414)
T 3se4_A 22 NFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-E-NTSSWYEVDSF 98 (414)
T ss_dssp EEEEC----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEEEE-T-TEEEEEECCCB
T ss_pred ceEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEEee-C-CcCCCEecCce
Confidence 45677777777666777 99999985332221111111 21233445557899999999999999 4 443322 2222
Q ss_pred ----ecCCCCCCccEEEEEeCCEEEEEeeCCC-C--------CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCC
Q psy4956 87 ----TTPPDPPTNLSVNVRSGKTAQIFWSPPI-S--------GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLT 153 (361)
Q Consensus 87 ----~t~~~~p~~l~~~~~~~~~v~l~W~~p~-~--------~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 153 (361)
.+.+.|| .+.+.. ..+++.|+|+ |. . +...+|+|.|+..+.... .. +..... .+.|.+|.
T Consensus 99 ~~~~~~~~~pP-~v~~~~-~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~-~~--~~~~~~-~~~i~~L~ 171 (414)
T 3se4_A 99 TPFRKAQIGPP-EVHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVE-ER--IENIYS-RHKIYKLS 171 (414)
T ss_dssp CHHHHCCCCCC-EEEEEE-CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCE-EE--EEEECS-EEEECCCC
T ss_pred eecccceeCCC-eEEEEE-cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCce-EE--EecCCc-EEEEcCCC
Confidence 2334555 466654 4568999999 54 2 245689999988654322 22 333445 89999999
Q ss_pred CCcEEEEEEEEEeC--CCCcccceeeeeccC----CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCC-----
Q psy4956 154 PGGSYQVQLFSVYD--SKESVAYTSRNFTTK----PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPP----- 222 (361)
Q Consensus 154 p~~~Y~v~v~a~~~--~~~s~~~~~~~~~t~----p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~----- 222 (361)
|++.|.|+|+|.+. .+.+..+....+.+. +.+|.++.+...+ .++.|.|+++. . ..+|.|.|...
T Consensus 172 p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~--~-~~~Y~v~y~~~~~~~~ 247 (414)
T 3se4_A 172 PETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTY--A-NMTFQVQWLHAFLKRN 247 (414)
T ss_dssp TTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSS--S-SCEEEEEEEESGGGSC
T ss_pred CCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEECCCC--C-CeEEEEEEEehhcccc
Confidence 99999999999994 454443333333332 3578899887664 68999999863 2 34999999863
Q ss_pred ---CCCCceeEEeeccCCCCCcEEEec-CCCCCCeEEEEEEEEeCCCCCCce-EEEEecC----CCCCccceEEeeecCC
Q psy4956 223 ---DAPESVLYVEKEGEPPGPAQAAFK-GLVPGRAYNISVQTVSEDEISTPT-TAQYRTI----PLRPLSFTYDKASITS 293 (361)
Q Consensus 223 ---~~~~~~~~~~~~~~~~~~~~~~~~-~L~p~t~Y~v~V~a~~~~~~s~~~-~~~~~t~----~~~p~~l~~~~~~~~~ 293 (361)
+...+... ... .......+.|. +|.+++.|.|+|+|.++.|.+..+ ...+.+. +.||. |.+ . ...
T Consensus 248 ~~~~~~~w~~~-~~~-~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~-l~~--~-~~~ 321 (414)
T 3se4_A 248 PGNHLYKWKQI-PDC-ENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-FNI--R-SLS 321 (414)
T ss_dssp CCC--CCCCBC-STT-TTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC------------------
T ss_pred ccccccCceEC-CCc-cCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccccchhccccCCCe-EEE--E-ECC
Confidence 11122110 000 01123567775 699999999999999998877544 2344332 44566 777 4 345
Q ss_pred ceEEEEeeCCCCC-------CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 294 NSLRVVWEPPKGF-------SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 294 ~si~l~W~~~~~~-------~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
+++.|+|++|... +.+.+|+|.|.+.+.... .. .....+.+.|.+ |+|++.|.|+|+|..
T Consensus 322 ~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~-~~---~~~~~~~~~l~~-L~p~t~Y~~~V~A~~ 388 (414)
T 3se4_A 322 DSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAE-RK---IIEKKTDVTVPN-LKPLTVYCVKARAHT 388 (414)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCce-EE---EEecCCeEEeCC-CCCCCeEEEEEEEEe
Confidence 7999999997432 145778888776543211 11 123456899986 999999999999986
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=201.61 Aligned_cols=241 Identities=15% Similarity=0.182 Sum_probs=171.2
Q ss_pred CceEEEEec--CCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEE
Q psy4956 9 HGANLVIKI--PENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86 (361)
Q Consensus 9 ~~~~l~~~~--p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~ 86 (361)
+...|.|+. +...++.+.+|+|.|+...+. ..... .+...+.+|.|++.|.|+|+|.|..|.+ .+....+
T Consensus 23 ~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~---~~~~~----~~~~~~~~l~p~t~Y~~~V~A~n~~G~s-~~s~~~~ 94 (290)
T 3l5i_A 23 RTVQLVWKTLPPFEANGKILDYEVTLTRWKSH---LQNYT----VNATKLTVNLTNDRYLATLTVRNLVGKS-DAAVLTI 94 (290)
T ss_dssp EEEEEEECCCCHHHHCSCEEEEEEEEEETTSC---CEEEE----ESSSEEEEEECSSCEEEEEEEEESSCBC-CCEEEEE
T ss_pred ceEEEEEccCCchhcCCceEeEEEEEEeCCcC---ceeEe----cCCcEEEEEcCCceEEEEEEEEcCCCCC-CCceEEe
Confidence 445566665 335678999999999985432 12222 3455788999999999999999987444 4444444
Q ss_pred ecC----CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCC--CeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 87 TTP----PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTP--PRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 87 ~t~----~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
... +.+|.++.+... .+++.|+|++|. +.+.+|+|+|+....... .....+.......+.+.+|.|++.|.|
T Consensus 95 ~~~~~~~~~p~~~~~~~~~-~~si~l~W~~p~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~ 172 (290)
T 3l5i_A 95 PACDFQATHPVMDLKAFPK-DNMLWVEWTTPR-ESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLI 172 (290)
T ss_dssp CCTTCCCCCCCEEEEEEEE-TTEEEEEEECCS-SCCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEE
T ss_pred ecccccCCCccceeEEEeC-CCeEEEEEeCCC-CCCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCccEEEE
Confidence 333 444566776665 479999999985 478999999988654321 222223333323778899999999999
Q ss_pred EEEEEeCCCCcccceeeeeccC---CCCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCCceeEEeec
Q psy4956 161 QLFSVYDSKESVAYTSRNFTTK---PNTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPESVLYVEKE 234 (361)
Q Consensus 161 ~v~a~~~~~~s~~~~~~~~~t~---p~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~~~~~~~~~ 234 (361)
+|+|.+..|.+.+ ......+. |..|.++.+...+.+++.|+|+++. ..+.+.+|.|.|...++........
T Consensus 173 ~V~A~n~~g~g~~-~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~-- 249 (290)
T 3l5i_A 173 TVTPVYADGPGSP-ESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVD-- 249 (290)
T ss_dssp EEEEEETTEECCC-EEEEEESSCCCCSSCCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCCEEEEEE--
T ss_pred EEEEEeCCccccc-EEEEeEccccCCCCCCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCeEEEEeC--
Confidence 9999998887764 22333333 5555688888889999999998542 2378999999999876544333232
Q ss_pred cCCCCCcEEEecCCCCCCeEEEEEEEEeCCC
Q psy4956 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265 (361)
Q Consensus 235 ~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~ 265 (361)
...+.+.|.+|.|++.|.|+|+|.+..|
T Consensus 250 ---~~~~~~~~~~L~p~t~Y~~~V~A~n~~G 277 (290)
T 3l5i_A 250 ---SSHTEYTLSSLTSDTLYMVRMAAYTDEG 277 (290)
T ss_dssp ---TTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred ---CCceEEEeCCCCCCCEEEEEEEEEeCCC
Confidence 3358999999999999999999999888
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=241.60 Aligned_cols=338 Identities=15% Similarity=0.099 Sum_probs=185.3
Q ss_pred EEeCCCceEEEEecCCCC-CCCcceEEEEEEcCC-------------C-CCCCCe--EEeec------CccceEEecCCC
Q psy4956 4 IVHGVHGANLVIKIPENL-SSDNSTYRLDYIPAH-------------G-HPPPNT--TYVSR------DIKDNIEFSEGL 60 (361)
Q Consensus 4 ~~~~~~~~~l~~~~p~~~-~~~~~~Y~v~~~~~~-------------~-~~~~~~--~~~~~------~~~~~~~i~~L~ 60 (361)
.....+...|.|+.|... .+++.+|.|+|+... + ..+... ..+.. ...+++.|.+|+
T Consensus 478 ~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 557 (897)
T 2dtg_E 478 IRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLK 557 (897)
T ss_dssp EEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEECSCC
T ss_pred EEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeCCCC
Confidence 344566777888877753 459999999998752 1 111111 11111 025789999999
Q ss_pred CCceEEEEEEE-ecCCcC----ccceeeEEEec---CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCC
Q psy4956 61 PGTKYDFYLYY-TNSTVH----DWLTWTASITT---PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSE 130 (361)
Q Consensus 61 p~t~Y~i~V~a-~~~~~~----~~~~~~~~~~t---~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~ 130 (361)
|++.|.|+|+| .+..|. +..+....+.| .|.+|.++.+...+.+++.|+|++|. +|.+.+|+|+|+....
T Consensus 558 P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~V~~~~~~~ 637 (897)
T 2dtg_E 558 PWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAE 637 (897)
T ss_dssp SSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECC
T ss_pred CCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeEEEEEEEECCC
Confidence 99999999999 776543 22222344444 57788899999989999999999985 6779999999987654
Q ss_pred CCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceee---eeccCCCCCcceEEEeccCCeEEEEeecCC
Q psy4956 131 KTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR---NFTTKPNTPGKFIVWFRNETTLLVLWQPSY 207 (361)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~---~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~ 207 (361)
... +. ... .+....|.|++.|.++|.|.+..+.+...... .....|..|..+. .....+++.+.|+++.
T Consensus 638 ~~~-----~~-~~~-~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~-~~~~~~s~~~~W~~~~ 709 (897)
T 2dtg_E 638 DSE-----LF-ELD-YCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL-KELEESSFRKTFEDYL 709 (897)
T ss_dssp CCS-----CT-TCS-SSCSCCCCCC-------------------------------------------------------
T ss_pred Ccc-----ce-ecc-cccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchh-hhhhhhheeeeEEEcc
Confidence 221 11 112 23335589999999999999876554321111 1112244444454 4456778999998753
Q ss_pred CCCcceEE---EEEEeCC---C----CCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCC----ceEEE
Q psy4956 208 PASIYTHY---KVSIDPP---D----APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST----PTTAQ 273 (361)
Q Consensus 208 ~~~~~~~y---~v~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~----~~~~~ 273 (361)
.. .+-.+ ...+... + ........ ....+.+.+.+|.|++.|.|+|+|.+..|.+. +..+.
T Consensus 710 ~n-~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~-----~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~ 783 (897)
T 2dtg_E 710 HN-VVFVPRPSRKRRSLGDVGNAGNNEEHRPFEK-----VVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVS 783 (897)
T ss_dssp ---------------------------CCSCSCE-----ECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEE
T ss_pred Cc-eEEccCCCcccccccccccccCccccceEEe-----cCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeE
Confidence 21 11111 0000000 0 00000001 12347899999999999999999999887643 34455
Q ss_pred EecCC-----CCCccceEEeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCce-eecCCCCceeEeccCCCC
Q psy4956 274 YRTIP-----LRPLSFTYDKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPI-TKSRDEPTQCDMSEGLEP 346 (361)
Q Consensus 274 ~~t~~-----~~p~~l~~~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~p 346 (361)
++|.+ .+|.++.+ ...+.+++.|+|++|.. .+.+.+|.|.|+..+........ .......+.+++.+ |.|
T Consensus 784 ~~T~~~~~~p~~P~~l~~--~~~~~~sv~LsW~~P~~~nG~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p 860 (897)
T 2dtg_E 784 ARTMPEAKADDIVGPVTH--EIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRG-LSP 860 (897)
T ss_dssp EECCCCCCCCCCCCCCCC--CSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCS-CCS
T ss_pred EeccCccCCCCCCcceEE--EeCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCcceEEEEeeeeecccCcEEECC-CCC
Confidence 66654 56788888 78888999999999743 24799999999877541111111 11134567899986 999
Q ss_pred CceEEEEEEEEeC
Q psy4956 347 GRTYQVLVKTVSG 359 (361)
Q Consensus 347 ~t~Y~v~V~a~~~ 359 (361)
| .|.|+|+|.+.
T Consensus 861 g-tY~~rV~A~n~ 872 (897)
T 2dtg_E 861 G-NYSVRIRATSL 872 (897)
T ss_dssp S-EECCCCCEEET
T ss_pred C-cEEEEEEEEeC
Confidence 9 69999999985
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-25 Score=174.72 Aligned_cols=183 Identities=23% Similarity=0.330 Sum_probs=145.4
Q ss_pred EEecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 85 SITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 85 ~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.+.+.|.+|.++.+...+.+++.|+|++| .+.+.+|+|+|+..+ +......+..... .+.|.+|.|++.|.|+|+|
T Consensus 2 ~~~t~p~~P~~l~~~~~~~~sv~l~W~~p-~~~i~~Y~v~~~~~~--~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a 77 (186)
T 1qr4_A 2 NAGTDLDNPKDLEVSDPTETTLSLRWRRP-VAKFDRYRLTYVSPS--GKKNEMEIPVDST-SFILRGLDAGTEYTISLVA 77 (186)
T ss_dssp ------CCCEEEEEESCCSSEEEEEEECC-SSCCSEEEEEEECTT--CCEEEEEECTTCS-EEEEESCCSSCEEEEEEEE
T ss_pred cccCCCcCCCceEEEecCCCEEEEEEeCC-CCCccEEEEEEEeCC--CCeeEEECCCCCC-EEEECCCCCCCEEEEEEEE
Confidence 35678999999999999999999999997 468899999998532 3455566666666 9999999999999999999
Q ss_pred EeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCce-eEEeeccCCCCCcEE
Q psy4956 165 VYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV-LYVEKEGEPPGPAQA 243 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~~~~ 243 (361)
.++++.+.+ ....+.+.|.+|.++.+...+.+++.|+|.++ .+.+.+|.|.|...++.... .... ....++
T Consensus 78 ~~~~~~s~~-~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~ 149 (186)
T 1qr4_A 78 EKGRHKSKP-TTIKGSTVVGSPKGISFSDITENSATVSWTPP--RSRVDSYRVSYVPITGGTPNVVTVD-----GSKTRT 149 (186)
T ss_dssp ESSSCBCCC-EEEEEECCCCCCSCEEEESCCSSCEEEEECCC--SSCCSEEEEEEEETTCCCCEEEEEE-----TTCCEE
T ss_pred EcCCccCCC-EEEEEECCCCCCCccEEEEeCCCEEEEEEECC--CCcccEEEEEEEeCCCCCceEEEcC-----CCcCEE
Confidence 998777765 45666777889999999999999999999987 36789999999876543322 2222 235889
Q ss_pred EecCCCCCCeEEEEEEEEeCCCCCCceEEEEecCCC
Q psy4956 244 AFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPL 279 (361)
Q Consensus 244 ~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~~ 279 (361)
.+.+|.|++.|.|+|+|.++.|.+.+....+.|.|+
T Consensus 150 ~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 150 KLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 999999999999999999999999999988888764
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-24 Score=170.79 Aligned_cols=168 Identities=26% Similarity=0.434 Sum_probs=136.2
Q ss_pred eccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 179 ~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
+.+.|.+|.+|.+...+.+++.|+|+++ .+.+.+|.|.|...++....... ......+.+.+|.|++.|.|+|
T Consensus 3 ~~t~p~~P~~l~~~~~~~~sv~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~t~Y~~~V 75 (186)
T 1qr4_A 3 AGTDLDNPKDLEVSDPTETTLSLRWRRP--VAKFDRYRLTYVSPSGKKNEMEI-----PVDSTSFILRGLDAGTEYTISL 75 (186)
T ss_dssp -----CCCEEEEEESCCSSEEEEEEECC--SSCCSEEEEEEECTTCCEEEEEE-----CTTCSEEEEESCCSSCEEEEEE
T ss_pred ccCCCcCCCceEEEecCCCEEEEEEeCC--CCCccEEEEEEEeCCCCeeEEEC-----CCCCCEEEECCCCCCCEEEEEE
Confidence 4567899999999999999999999987 45789999999965433222222 2345889999999999999999
Q ss_pred EEEeCCCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCcee
Q psy4956 259 QTVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQC 338 (361)
Q Consensus 259 ~a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (361)
+|.++.+.+.+....+.+.|.+|.++.+ ..++.+++.|+|.+|.+ .+.+|.|.|...+.+. ..........+++
T Consensus 76 ~a~~~~~~s~~~~~~~~t~p~~P~~l~~--~~~~~~sv~l~W~~p~~--~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~ 149 (186)
T 1qr4_A 76 VAEKGRHKSKPTTIKGSTVVGSPKGISF--SDITENSATVSWTPPRS--RVDSYRVSYVPITGGT--PNVVTVDGSKTRT 149 (186)
T ss_dssp EEESSSCBCCCEEEEEECCCCCCSCEEE--ESCCSSCEEEEECCCSS--CCSEEEEEEEETTCCC--CEEEEEETTCCEE
T ss_pred EEEcCCccCCCEEEEEECCCCCCCccEE--EEeCCCEEEEEEECCCC--cccEEEEEEEeCCCCC--ceEEEcCCCcCEE
Confidence 9999988888888889999999999999 88899999999999987 7999999999876422 2223345667899
Q ss_pred EeccCCCCCceEEEEEEEEeCC
Q psy4956 339 DMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 339 ~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.+.+ |+||+.|.|+|+|.++.
T Consensus 150 ~i~~-L~p~t~Y~~~V~A~~~~ 170 (186)
T 1qr4_A 150 KLVK-LVPGVDYNVNIISVKGF 170 (186)
T ss_dssp EECS-CCSSCEEEEEEEEEETT
T ss_pred EEcC-CCCCCEEEEEEEEEcCC
Confidence 9996 99999999999998864
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.9e-24 Score=167.76 Aligned_cols=182 Identities=24% Similarity=0.348 Sum_probs=145.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
...+|.++.+...+.+++.|+|++|..+.+.+|+|+|+..+.........+..... .+.|.+|.|++.|.|+|+|.+..
T Consensus 22 ~~P~P~~l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~ 100 (203)
T 2gee_A 22 EVPQPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVG-YYTVTGLEPGIDYDISVYTVKNG 100 (203)
T ss_dssp CCCCCEEEEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEESSS
T ss_pred cCcCCCccEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeEEcCCCcc-EEEeCCCCCCCEEEEEEEEEeCC
Confidence 33478999999999999999999987667899999999876555555666667777 99999999999999999999988
Q ss_pred CCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCC
Q psy4956 169 KESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248 (361)
Q Consensus 169 ~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 248 (361)
+.+.+... ...+.+.+|.++.+...+.+++.|+|+++. .+.+.+|.|.|...++......... ....+.+.+.+|
T Consensus 101 g~s~~~~~-~t~~~~p~P~~l~~~~~~~~sv~l~W~~p~-~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L 175 (203)
T 2gee_A 101 GESTPTTL-TQQTAVPPPTDLRFTNIGPDTMRVTWAPPP-SIDLTNFLVRYSPVKNEEDVAELSI---SPSDNAVVLTNL 175 (203)
T ss_dssp CBCCCEEE-EEECCCCCCEEEEEEEEETTEEEEEEECCS-SCCCSEEEEEEEETTCGGGCEEEEE---CTTCCEEEECSC
T ss_pred CccccEee-eecCCCcCCCceEEEEcCCCEEEEEEcCCC-CCCccEEEEEEEECCCCCccEEEEc---CCCcCEEEECCC
Confidence 88866433 333444489999999999999999999873 3688999999987554332211111 334689999999
Q ss_pred CCCCeEEEEEEEEeCCCCCCceEEEEec
Q psy4956 249 VPGRAYNISVQTVSEDEISTPTTAQYRT 276 (361)
Q Consensus 249 ~p~t~Y~v~V~a~~~~~~s~~~~~~~~t 276 (361)
.|++.|.|+|+|.+..|.+.+....++|
T Consensus 176 ~p~t~Y~~~V~A~~~~g~s~p~~~~~~T 203 (203)
T 2gee_A 176 LPGTEYVVSVSSVYEQHESTPLRGRQKT 203 (203)
T ss_dssp CTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred CCCCEEEEEEEEecCCCcCCCeeeEEcC
Confidence 9999999999999999999988876654
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-22 Score=170.66 Aligned_cols=253 Identities=13% Similarity=0.168 Sum_probs=153.5
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeecC-CCCceEEEc--CCCCCcEEEEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTE-NPPAGYSLK--DLTPGGSYQVQLFS 164 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~~-~~~~~~~l~--~L~p~~~Y~v~v~a 164 (361)
..+|.++.+... +..+.|+|.+|.. +.+. |.|+|+..+...|.....+.. ... .+.|. +|.|++.|.|+|+|
T Consensus 4 l~~P~nv~~~~~-n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~-~c~lt~~~l~~~~~Y~~rV~A 80 (306)
T 3s98_A 4 LKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITST-KCNFSSLKLNVYEEIKLRIRA 80 (306)
T ss_dssp ----CCCEEEEE-TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSBSSS-EEECCC---CTTSCEEEEEEE
T ss_pred CCCCcEeEEEEE-CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCCCCC-EEEccccccCCCCcEEEEEEE
Confidence 567899999876 5668899999862 4554 999999864434432111211 223 66665 46899999999999
Q ss_pred EeCCCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCC-------CCcceEEEEEEeCCCCCCceeEEee
Q psy4956 165 VYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYP-------ASIYTHYKVSIDPPDAPESVLYVEK 233 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~-------~~~~~~y~v~~~~~~~~~~~~~~~~ 233 (361)
.+ ++.|..+....+. +.+.||. +.+.... ++|.|.|+|+.. .+.+.+|.|.|+..+...... ...
T Consensus 81 ~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~-~~~ 156 (306)
T 3s98_A 81 EK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER-IEN 156 (306)
T ss_dssp EC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEECS-SCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEE-EEE
T ss_pred Ee-CCcCCCEeeeeEechhhCccCCCe-EEEEEcC-CEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEE-Eec
Confidence 99 7776543333343 2355564 7777544 589999996543 256789999998765544222 221
Q ss_pred ccCCCCCcEEEecCCCCCCeEEEEEEEEe--CCCCCCceE-EEEecC----CCCCccceEEeeecCCceEEEEeeCCCCC
Q psy4956 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVS--EDEISTPTT-AQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPKGF 306 (361)
Q Consensus 234 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~--~~~~s~~~~-~~~~t~----~~~p~~l~~~~~~~~~~si~l~W~~~~~~ 306 (361)
. .+.+.|.+|.|++.|.|+|+|.+ ..|.+..+. ..+.|. +.+|.++.+ .. ..+++.|+|+++..
T Consensus 157 ~-----~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~--~~-~~~s~~l~W~~p~~- 227 (306)
T 3s98_A 157 I-----YSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEV--SV-QNQNYVLKWDYTYA- 227 (306)
T ss_dssp E-----CTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEE--EE-ETTEEEEEEECSSS-
T ss_pred c-----cceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEE--EE-ecCEEEEEeCCCCC-
Confidence 1 37899999999999999999999 444443222 222332 245788888 33 34789999999764
Q ss_pred CCceeEEEEEEEC------CCCCCCCc-e-eecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 307 SEFDKYQVSINVR------RPGASSTP-I-TKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 307 ~~~~~y~i~~~~~------~~~~~~~~-~-~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
. .+|.+.+... +.+..... + .......+.+.+.+.|.++..|.|||+|.+++
T Consensus 228 -~-~~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~ 287 (306)
T 3s98_A 228 -N-MTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGN 287 (306)
T ss_dssp -S-CEEEEEEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSS
T ss_pred -c-EEEEEEEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEEEEEccCC
Confidence 3 4577766542 11111111 0 11234556788885244555999999999875
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-22 Score=179.50 Aligned_cols=253 Identities=13% Similarity=0.125 Sum_probs=156.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCe---EEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPR---IIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~---~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
.+.+|.++.+... +..+.|+|+++.+ +++. |.|+|+..+...|.. +..+..... .++..+|.|++.|.|+|+
T Consensus 7 ~l~~P~nv~~~~~-~~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~-~~t~~~l~~~~~Y~~rV~ 83 (414)
T 3se4_A 7 NLKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKC-NFSSLKLNVYEEIKLRIR 83 (414)
T ss_dssp ----CCCCCEEEE-TTEEEEC----------CE-EEEEEEESSCCCCEEEEEEEEESCSCE-ECCSSCCCTTSCEEEEEE
T ss_pred CCCCCceeEEEEE-CCceEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECcCccCCCCCEE-ECCcccccCCCcEEEEEE
Confidence 4567999999886 4578999999873 4565 999999865444542 222322221 334457899999999999
Q ss_pred EEeCCCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCC-CC-------CcceEEEEEEeCCCCCCceeEE
Q psy4956 164 SVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSY-PA-------SIYTHYKVSIDPPDAPESVLYV 231 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~-~~-------~~~~~y~v~~~~~~~~~~~~~~ 231 (361)
|.+ ++.|.+.....+. +.+.||. +.+.... ++|.|+|+ |. .. +.+.+|.|.|+..+...... .
T Consensus 84 A~n-~~~S~~s~~~~~~~~~~~~~~pP~-v~~~~~~-~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~-~ 158 (414)
T 3se4_A 84 AEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEER-I 158 (414)
T ss_dssp EEE-TTEEEEEECCCBCHHHHCCCCCCE-EEEEECS-SCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEE-E
T ss_pred Eee-CCcCCCEecCceeecccceeCCCe-EEEEEcC-CEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEE-E
Confidence 999 6666543322222 3344554 7766544 58999999 53 22 24679999998776544322 2
Q ss_pred eeccCCCCCcEEEecCCCCCCeEEEEEEEEeC--CCCCCce-EEEEecC----CCCCccceEEeeecCCceEEEEeeCCC
Q psy4956 232 EKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE--DEISTPT-TAQYRTI----PLRPLSFTYDKASITSNSLRVVWEPPK 304 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~--~~~s~~~-~~~~~t~----~~~p~~l~~~~~~~~~~si~l~W~~~~ 304 (361)
... ...+.+.+|.|++.|.|+|+|.+. .+.+..+ ...+.+. +.+|.+|.+ ... ..++.|+|++|.
T Consensus 159 ~~~-----~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~--~~~-~~~~~l~W~pp~ 230 (414)
T 3se4_A 159 ENI-----YSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEV--SVQ-NQNYVLKWDYTY 230 (414)
T ss_dssp EEE-----CSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEE--EEE-TTEEEEEEECSS
T ss_pred ecC-----CcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEE--EEe-cCCeEEEECCCC
Confidence 222 378999999999999999999994 3433221 1122222 245788888 444 367999999986
Q ss_pred CCCCceeEEEEEEEC--------CCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 305 GFSEFDKYQVSINVR--------RPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 305 ~~~~~~~y~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
+ . .+|.|+|... +...+...........+.+.++++|.+++.|.|+|+|.++.
T Consensus 231 ~--~-~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~ 291 (414)
T 3se4_A 231 A--N-MTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGN 291 (414)
T ss_dssp S--S-CEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSS
T ss_pred C--C-eEEEEEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCC
Confidence 4 3 4999999874 11111110011123345777763499999999999999874
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-22 Score=179.63 Aligned_cols=293 Identities=13% Similarity=0.144 Sum_probs=181.3
Q ss_pred eEEe--cCCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCCC--------CcccEE
Q psy4956 53 NIEF--SEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG--------KYSGFK 122 (361)
Q Consensus 53 ~~~i--~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~--------~~~~y~ 122 (361)
.+.| ..+.-...|.|.|++.+.. +........-...|.||.+|.+.... ..+.|+|++|... ....|.
T Consensus 71 ~C~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~ 148 (419)
T 2gys_A 71 RCVIPCQSFVVTDVDYFSFQPDRPL-GTRLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFE 148 (419)
T ss_dssp EEEEECSCCCTTCEEEEEEEESSCC-CEEEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEE
T ss_pred EeEeCCcceeeecccEEEEeCCccc-cccceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEE
Confidence 4444 5666677899999995544 22222222223468999999988765 6999999998632 235799
Q ss_pred EEEEECCCCCCCeEEeecCCCCceEEEc--CCCCCcEEEEEEEEEeCC------CCcccceeeeeccC---CCCCcceEE
Q psy4956 123 LKVISLSEKTPPRIIGFTENPPAGYSLK--DLTPGGSYQVQLFSVYDS------KESVAYTSRNFTTK---PNTPGKFIV 191 (361)
Q Consensus 123 v~~~~~~~~~~~~~~~~~~~~~~~~~l~--~L~p~~~Y~v~v~a~~~~------~~s~~~~~~~~~t~---p~~p~~l~~ 191 (361)
|.|+..+ ..|.....+..... .+.+. +|.|++.|.|+|+|.+.. ..|..+....+.+. |.+|.++.+
T Consensus 149 v~yr~~~-~~w~~~~~~~~~~~-~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c 226 (419)
T 2gys_A 149 VVYKRLQ-DSWEDAAILLSNTS-QATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLEC 226 (419)
T ss_dssp EEEEETT-SCSTTCEEEEESSS-EEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEE
T ss_pred EEEccCC-CChhheeeecccce-EEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEE
Confidence 9999875 44443333322333 66666 899999999999999853 22333334444443 567889999
Q ss_pred EeccCCeEEEEeecCCCCCcceEEEEEEeCCCCC-----C-cee---EEeeccCCC---CCcEEEecCCCCCCeEEEEEE
Q psy4956 192 WFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP-----E-SVL---YVEKEGEPP---GPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 192 ~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~-----~-~~~---~~~~~~~~~---~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
...+.+.|.+.|++......-.+|.|.|+..... . ... ......... ....+.+.+|.+.+.|.|+|.
T Consensus 227 ~~~~~~~l~c~W~~~~~~~~~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~ 306 (419)
T 2gys_A 227 FFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQ 306 (419)
T ss_dssp EECSSSEEEEEEEEEHHHHTTCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEE
T ss_pred EECCceEEEeEEECCCCCCCceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEE
Confidence 9888899999999752111124699998865321 1 111 011000000 012566788999999999999
Q ss_pred EEeCCCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCC--CCCceeEEEEEEECCCCCCC-CceeecCCCCc
Q psy4956 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKG--FSEFDKYQVSINVRRPGASS-TPITKSRDEPT 336 (361)
Q Consensus 260 a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~--~~~~~~y~i~~~~~~~~~~~-~~~~~~~~~~~ 336 (361)
|.++.+.-.+. ....|.|| .+.+ .. ..+++.|+|.+|.. ...+.+|+|+|+..+. .+. ....... ..+
T Consensus 307 a~~~~~~~~~~---~~v~p~PP-~l~v--~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~-~w~~~~~~~~~-~~~ 377 (419)
T 2gys_A 307 PRRAEKHIKSS---VNIQMAPP-SLQV--TK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTA-TWKDSKTETLQ-NAH 377 (419)
T ss_dssp ECCCCEEEEGG---GSBCCCCC-EEEE--C----CCCEEEEEC--------CEEEEEEEECSSS-CSTTSCEEEEE-SCS
T ss_pred EccCCccccce---EEEEECCC-CeEE--EE-eCCeEEEEECCCcccccccceEEEEEEEcCCC-Ccceeeccccc-ccc
Confidence 97543311100 11136666 4666 33 36899999999843 1246799999998753 222 1112222 457
Q ss_pred eeEeccCCCCCceEEEEEEEEeC
Q psy4956 337 QCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 337 ~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
++.+.+ |+||+.|.|+|+|...
T Consensus 378 ~~~l~~-L~p~t~Y~~qVRa~~~ 399 (419)
T 2gys_A 378 SMALPA-LEPSTRYWARVRVRTS 399 (419)
T ss_dssp EEECCC-CCSSCCCEEEEEEEEC
T ss_pred EEEecc-CCCCCeEEEEEEEEEc
Confidence 899986 9999999999999975
|
| >3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.3e-23 Score=177.22 Aligned_cols=281 Identities=14% Similarity=0.164 Sum_probs=145.3
Q ss_pred CCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEe-CCEEEEEeeCCCC-----CCcccEEEEEEECCCCCCC
Q psy4956 61 PGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRS-GKTAQIFWSPPIS-----GKYSGFKLKVISLSEKTPP 134 (361)
Q Consensus 61 p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~-~~~v~l~W~~p~~-----~~~~~y~v~~~~~~~~~~~ 134 (361)
-+..|.+.+.+.+..+.... ......|.||.++.+...+ .+++.|+|++|.+ +....|+|.|+..+.+.|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~---~~~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~ 82 (380)
T 3lb6_C 6 LAVGCLYTFLISTTFGCTSS---SDTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWK 82 (380)
T ss_dssp ----------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCE
T ss_pred EehhhhhhheeecccccccC---CcccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcce
Confidence 34567777777666533321 1222358899999998766 6899999999864 2367899999987643444
Q ss_pred eEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC----CCCcc---cceeeeecc---C-CCCCcceEEEeccCCeEEEEe
Q psy4956 135 RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD----SKESV---AYTSRNFTT---K-PNTPGKFIVWFRNETTLLVLW 203 (361)
Q Consensus 135 ~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~----~~~s~---~~~~~~~~t---~-p~~p~~l~~~~~~~~~~~v~W 203 (361)
.... .. + ....++..+..|.|+|+|.+. .+.+. ++......+ . |.+|.++.+...+.+++.++|
T Consensus 83 ~~~~-~~--~--~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW 157 (380)
T 3lb6_C 83 TIIT-KN--L--HYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSW 157 (380)
T ss_dssp EEEE-SS--S--EEEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEE
T ss_pred EEEe-cc--E--EEEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEE
Confidence 3333 21 2 223345558999999999953 33332 222222222 2 467899999988999999999
Q ss_pred ecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEec--CCCCCCeEEEEEEEEeCCCCCCceEEEEe----cC
Q psy4956 204 QPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFK--GLVPGRAYNISVQTVSEDEISTPTTAQYR----TI 277 (361)
Q Consensus 204 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~----t~ 277 (361)
+++...+...+|.|.|+..+..............+....+.|. ++.+.+.|.|+|.|.+..|...+....+. ..
T Consensus 158 ~p~~~~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~~~~~~~~~v~ 237 (380)
T 3lb6_C 158 KPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVK 237 (380)
T ss_dssp ECC------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCEEEEECGGGSCC
T ss_pred cCCCCCCCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccccEEEcHHHccc
Confidence 9875445567899999876543221110000001122356665 56889999999999987776544433333 25
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCCCC--CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccC-CCCCceEEEEE
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPKGF--SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEG-LEPGRTYQVLV 354 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~~~--~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~p~t~Y~v~V 354 (361)
|.||.++.+ .....+++.|+|++|... ..+.+|+|+|+..+. .+.. .... .++.+. + |+|++.|.|+|
T Consensus 238 p~pP~~l~v--~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~-~w~~--~~~~---~~~~l~-~~L~p~t~Y~~qV 308 (380)
T 3lb6_C 238 PLPPVYLTF--TRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDT-TLVT--ATVE---NETYTL-KTTNETRQLCFVV 308 (380)
T ss_dssp CCCCEEEEE--C-------CEEEECCSSSCCSTTEEEEECC---------C--CEES---SSCC-------------CCE
T ss_pred CCCCceEEE--EEcCCCeEEEEECCCCCCCCcceEEEEEEEEeCCC-CceE--eccc---ceEEEe-CccCCCcEEEEEE
Confidence 778899999 666678999999997531 356899999988532 2211 1111 256676 5 99999999999
Q ss_pred EEEe
Q psy4956 355 KTVS 358 (361)
Q Consensus 355 ~a~~ 358 (361)
+|..
T Consensus 309 Ra~~ 312 (380)
T 3lb6_C 309 RSKV 312 (380)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9983
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-23 Score=166.97 Aligned_cols=192 Identities=17% Similarity=0.255 Sum_probs=145.3
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
.++.+|.++.+...+.+++.|+|++| ++.+.+|+|+|+..+..... ...+..... ++.|.+|.|++.|.|+|+|.+.
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p-~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~ 80 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP-SGKPMGYRVKYWIQGDSESE-AHLLDSKVP-SVELTNLYPYCDYEMKVCAYGA 80 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC-SSCCCEEEEEEEETTSCGGG-CEEEEESSS-EEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC-CCccceEEEEEEECCCCccc-eEEEcCCcc-EEEECCCCCCCEEEEEEEEEeC
Confidence 35788999999999999999999998 67899999999886543222 223334555 8999999999999999999998
Q ss_pred CCCcccceeeeeccC---CCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCce--eEEeeccCCCCCc
Q psy4956 168 SKESVAYTSRNFTTK---PNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESV--LYVEKEGEPPGPA 241 (361)
Q Consensus 168 ~~~s~~~~~~~~~t~---p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~~ 241 (361)
.|.+..+....++|. |.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|...+..... ............+
T Consensus 81 ~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (234)
T 3f7q_A 81 QGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNR 160 (234)
T ss_dssp TEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCC
T ss_pred CCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceEEEecCCcce
Confidence 887765544555554 67788999999999999999987643 37899999999875543221 0011111133457
Q ss_pred EEEecCCCCCCeEEEEEEEEeCCCCCCceE--EEEecCCCCCc
Q psy4956 242 QAAFKGLVPGRAYNISVQTVSEDEISTPTT--AQYRTIPLRPL 282 (361)
Q Consensus 242 ~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~--~~~~t~~~~p~ 282 (361)
.+.|.+|.|++.|.|+|+|.+..|.+.... +.+.|.+.+|.
T Consensus 161 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~ 203 (234)
T 3f7q_A 161 MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPM 203 (234)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCC
T ss_pred EEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCC
Confidence 899999999999999999999998887754 45667666553
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-22 Score=169.51 Aligned_cols=255 Identities=14% Similarity=0.125 Sum_probs=163.0
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC---CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS---GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~---~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
..||.+|.+.....+++.|+|++|.. +...+|++.+.. .+.... . .. .+.+.+|.++..|.++|+|..
T Consensus 4 ~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~----~~~~~~--~--~~-~~~~~~~~~~~~y~~~V~a~~ 74 (314)
T 3bpo_C 4 QPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGD----KQDKKI--A--PE-TRRSIEVPLNERICLQVGSQC 74 (314)
T ss_dssp CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCEE--E--SS-SEEEEECCCSSCEEEEEEECC
T ss_pred CCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecc----cCceEe--c--cc-cEEEEEEcCCCcEEEEEEEEe
Confidence 47889999988888999999999762 234567776522 222222 1 22 566778999999999999954
Q ss_pred -CCCCcc--cceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCC
Q psy4956 167 -DSKESV--AYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239 (361)
Q Consensus 167 -~~~~s~--~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~ 239 (361)
.++.+. ......+. ..|.+|.++.+...+.+++.++|+++...+...+|.|.|+..+........... ..+.
T Consensus 75 ~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~~~~~~Y~l~y~~~~~~~~~~C~~~~-~~~~ 153 (314)
T 3bpo_C 75 STNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIF-REGQ 153 (314)
T ss_dssp ---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC---CCCCEEEEEEESSCSSCEECCCEE-EETT
T ss_pred cCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCCCCCccEEEEEEeCCCCccccCcCee-cCCC
Confidence 333322 22221121 225678999999888899999999875456678999998764322211110000 0122
Q ss_pred CcEEEecCCC----CCCeEEEEEEEEeCCCCCCceEEEEe----cCCCCCccceEEeeecCCceEEEEeeCCCC-CCCce
Q psy4956 240 PAQAAFKGLV----PGRAYNISVQTVSEDEISTPTTAQYR----TIPLRPLSFTYDKASITSNSLRVVWEPPKG-FSEFD 310 (361)
Q Consensus 240 ~~~~~~~~L~----p~t~Y~v~V~a~~~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~~~~si~l~W~~~~~-~~~~~ 310 (361)
...+.+..+. ..+.|.|+|.|.++.|.+.+....+. ..|.||.+|++ . ...+++.|+|++|.. ...+.
T Consensus 154 ~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~~~~~~~~~v~P~pP~~l~~--~-~~~~~l~lsW~~P~~~~~~~l 230 (314)
T 3bpo_C 154 YFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSFNIVPLTSRVKPDPPHIKNL--S-FHNDDLYVQWENPQNFISRCL 230 (314)
T ss_dssp EEEEEEECCC--------CCEEEEEEETTSCSCCEEEEECSSSSEECCCCEEEEE--E-EETTEEEEEEECCTTCCGGGE
T ss_pred eEEEEECCCCccccceeEEEEEEEEEcCCCceecccEEEehhheEeeCCCCEEEE--E-EcCCcEEEEEeCCCccCCceE
Confidence 3567777665 47899999999998777655444332 34889999999 5 667899999999853 22467
Q ss_pred eEEEEEEECCCCCCCCcee-----------ecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 311 KYQVSINVRRPGASSTPIT-----------KSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 311 ~y~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
+|+|+|+..+...+..... ......+++.+.+ |+||+.|.|+|+|..
T Consensus 231 ~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~qVra~~ 288 (314)
T 3bpo_C 231 FYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPG-VLPDTLNTVRIRVKT 288 (314)
T ss_dssp EEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEES-CCTTSCEEEEEEEEE
T ss_pred EEEEEEEECCCCcceEEecccccccccccccccCCceEEEEcc-CCCCCEEEEEEEeee
Confidence 9999999775432211111 0123457889986 999999999999997
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-22 Score=159.64 Aligned_cols=178 Identities=19% Similarity=0.308 Sum_probs=134.6
Q ss_pred CCCccEEEEEe--CCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 92 PPTNLSVNVRS--GKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 92 ~p~~l~~~~~~--~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+|.+|.+...+ .+++.|+|++|..+.+.+|+|+|+..+.........+..... .+.|.+|.|++.|.|+|.|.+..|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~n~~G 80 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLN-SYTIKGLKPGVVYEGQLISIQQYG 80 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEEECTTCC-EEEECSCCTTEEEEEEEEEECTTS
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEecCCCcc-EEEecCCCCCCEEEEEEEEEeccc
Confidence 67888888877 899999999986678999999999865444556666776677 999999999999999999999887
Q ss_pred CcccceeeeeccC--------------CCC-C----cceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeE
Q psy4956 170 ESVAYTSRNFTTK--------------PNT-P----GKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY 230 (361)
Q Consensus 170 ~s~~~~~~~~~t~--------------p~~-p----~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~ 230 (361)
.+.+. ...+++. |.+ | .++.+...+.+++.|+|+++ .+.+.+|.|.|...+.......
T Consensus 81 ~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~ 157 (201)
T 2ha1_A 81 HQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA--SDTVSGFRVEYELSEEGDEPQY 157 (201)
T ss_dssp CEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS--CTTEEEEEEEEEETTTCCCCEE
T ss_pred ccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC--CCCccEEEEEEEECCCCCceeE
Confidence 77532 2222111 222 2 45677778889999999987 4688999999986533222211
Q ss_pred EeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEec
Q psy4956 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT 276 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t 276 (361)
... ....+++.|.+|.|++.|.|+|+|.+..|.+.+......|
T Consensus 158 ~~v---~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s~~~~t 200 (201)
T 2ha1_A 158 LDL---PSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQT 200 (201)
T ss_dssp EEE---ETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEEEEEEE
T ss_pred EEc---CCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEeeEeec
Confidence 111 2345889999999999999999999999988877665443
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-22 Score=160.89 Aligned_cols=180 Identities=16% Similarity=0.201 Sum_probs=135.2
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC------CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI------SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~------~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
.++.+|.++.+...+.+++.|+|++|. .+.+.+|+|+|+..+...+.. ..+..... .+.|.+|.|++.|.|+
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~-~~~i~~L~p~t~Y~~~ 80 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY-KNANATTL-SYLVTGLKPNTLYEFS 80 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCC-EEEEESSS-EEEECSCCTTCEEEEE
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceE-EEeCCCce-EEEecCcCCCCEEEEE
Confidence 356789999999999999999999875 467889999998865432222 23344555 9999999999999999
Q ss_pred EEEEeCCCCcccceeeeeccC---CC-CCcceEEEec--cCCeEEEEeecCC-CCCcceEEEEEEeCCCCCCcee-EEee
Q psy4956 162 LFSVYDSKESVAYTSRNFTTK---PN-TPGKFIVWFR--NETTLLVLWQPSY-PASIYTHYKVSIDPPDAPESVL-YVEK 233 (361)
Q Consensus 162 v~a~~~~~~s~~~~~~~~~t~---p~-~p~~l~~~~~--~~~~~~v~W~~~~-~~~~~~~y~v~~~~~~~~~~~~-~~~~ 233 (361)
|+|.+..|.+..+....+.|. |. +|.++.+... +.+++.|+|+++. ..+.+.+|.|.|...+...... ...
T Consensus 81 V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~- 159 (211)
T 3p4l_A 81 VMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE- 159 (211)
T ss_dssp EEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEE-
T ss_pred EEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEE-
Confidence 999998887765444555553 54 7888988877 3679999999874 2378999999999766543211 110
Q ss_pred ccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE
Q psy4956 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT 271 (361)
Q Consensus 234 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~ 271 (361)
......+.+.+.+|.|++.|.|+|+|.+..|.++.+.
T Consensus 160 -~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~ 196 (211)
T 3p4l_A 160 -PVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSE 196 (211)
T ss_dssp -EEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCC
T ss_pred -EecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCC
Confidence 0123458899999999999999999999988776554
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.5e-22 Score=157.48 Aligned_cols=185 Identities=19% Similarity=0.168 Sum_probs=139.2
Q ss_pred EecCCCCCCccEEEEEeCCEEEEEeeCCC--CCC-cccEEEEEEECCCCCCCeEEeec---CCCCceEEEcCCCCCcEEE
Q psy4956 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGK-YSGFKLKVISLSEKTPPRIIGFT---ENPPAGYSLKDLTPGGSYQ 159 (361)
Q Consensus 86 ~~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~-~~~y~v~~~~~~~~~~~~~~~~~---~~~~~~~~l~~L~p~~~Y~ 159 (361)
....|.+|.++.+...+. ++.|+|++|. ++. +.+|+|+|+..+...+....... .... .+.+.+|.|++.|.
T Consensus 5 ~~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~ 82 (209)
T 2vkw_A 5 QADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEG-IVTIVGLKPETTYA 82 (209)
T ss_dssp CCCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHS-EEEECCCCTTCEEE
T ss_pred ccCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccc-eEEeCCCCCCCeEE
Confidence 345688899999988776 6899999985 454 89999999987654444332221 1234 89999999999999
Q ss_pred EEEEEEeCCCCcccceeeeecc----CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeec
Q psy4956 160 VQLFSVYDSKESVAYTSRNFTT----KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKE 234 (361)
Q Consensus 160 v~v~a~~~~~~s~~~~~~~~~t----~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~ 234 (361)
|+|+|.+..|.+..+....++| .|.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|+.. ..........
T Consensus 83 ~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~-~~~~~~~~~~- 160 (209)
T 2vkw_A 83 VRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRAL-SSEWKPEIRL- 160 (209)
T ss_dssp EEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEET-TSCCCCCEEE-
T ss_pred EEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECC-CCCCceeeec-
Confidence 9999999988876554444544 377888888888899999999998732 37889999999873 2222211111
Q ss_pred cCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEec
Q psy4956 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYRT 276 (361)
Q Consensus 235 ~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t 276 (361)
....+.+.+.+|.|++.|.|+|+|.+..|.+.++.....+
T Consensus 161 --~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~ 200 (209)
T 2vkw_A 161 --PSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT 200 (209)
T ss_dssp --CTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred --CCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhh
Confidence 2345789999999999999999999999999888765443
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-21 Score=154.31 Aligned_cols=162 Identities=22% Similarity=0.278 Sum_probs=127.3
Q ss_pred CCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEe
Q psy4956 8 VHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87 (361)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~ 87 (361)
.+...|.|+.|. ++.+.+|+|+|+..++... ........+.++++|.+|.|++.|.|+|+|.++. +.+.+......
T Consensus 36 ~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~-g~s~~~~~~t~ 111 (203)
T 2gee_A 36 DSSIGLRWTPLN--SSTIIGYRITVVAAGEGIP-IFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNG-GESTPTTLTQQ 111 (203)
T ss_dssp TTCEEEEEECCS--SSSCCEEEEEEEESSSSSC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEESSS-CBCCCEEEEEE
T ss_pred CCEEEEEecCCC--CCCccEEEEEEEECCCCCC-ceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCC-CccccEeeeec
Confidence 445566666665 4679999999998554322 2333333347899999999999999999999977 44555556666
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
+.+.+|.++.+...+.+++.|+|++|.++.+.+|.|.|+...+........+....+ .+.|.+|.|++.|.|+|+|.+.
T Consensus 112 ~~~p~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~~~ 190 (203)
T 2gee_A 112 TAVPPPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDN-AVVLTNLLPGTEYVVSVSSVYE 190 (203)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEEEECTTCC-EEEECSCCTTCEEEEEEEEEET
T ss_pred CCCcCCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEEEcCCCcC-EEEECCCCCCCEEEEEEEEecC
Confidence 666689999999999999999999987778999999999865444445566666677 9999999999999999999999
Q ss_pred CCCcccc
Q psy4956 168 SKESVAY 174 (361)
Q Consensus 168 ~~~s~~~ 174 (361)
.|.|.+.
T Consensus 191 ~g~s~p~ 197 (203)
T 2gee_A 191 QHESTPL 197 (203)
T ss_dssp TEECCCE
T ss_pred CCcCCCe
Confidence 9988763
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-21 Score=155.49 Aligned_cols=185 Identities=13% Similarity=0.122 Sum_probs=138.8
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCC-CCCe-EEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEK-TPPR-IIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
...|.+|.++.+.. +.+++.|+|++|. ++.+.+|.|+|+..... .|.. ...+..... .+.+ +|.|++.|.|+|
T Consensus 3 ~~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~-~~~~-~L~p~t~Y~~~V 79 (205)
T 1cfb_A 3 QDVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDS-SFVV-QMSPWANYTFRV 79 (205)
T ss_dssp CCCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCS-EEEE-ECCSSEEEEEEE
T ss_pred ccCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccCCCce-EEEE-eCCCCCEEEEEE
Confidence 34688999999999 9999999999985 45688999999876432 3422 234445555 7777 999999999999
Q ss_pred EEEeCCCCcccc-eeeeeccC---C-CCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCC-ceeEEee
Q psy4956 163 FSVYDSKESVAY-TSRNFTTK---P-NTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPE-SVLYVEK 233 (361)
Q Consensus 163 ~a~~~~~~s~~~-~~~~~~t~---p-~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~-~~~~~~~ 233 (361)
+|.+..|.+.++ ....++|. | .+|.++.+...+.+++.|+|+++. ..+.+.+|.|.|+..+... ..... .
T Consensus 80 ~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~-~ 158 (205)
T 1cfb_A 80 IAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN-I 158 (205)
T ss_dssp EEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE-E
T ss_pred EEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE-e
Confidence 999988877654 33444443 3 467889999889999999999875 3478999999998766543 22211 1
Q ss_pred ccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCc--eEEEEecC
Q psy4956 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP--TTAQYRTI 277 (361)
Q Consensus 234 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~--~~~~~~t~ 277 (361)
. ....+.+.+.+|.|++.|.|+|+|.+..|.++. ..+.+.|.
T Consensus 159 ~--~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 159 F--DWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp C--CTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred c--CCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 1 224588999999999999999999999887762 34455554
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-20 Score=163.37 Aligned_cols=230 Identities=15% Similarity=0.155 Sum_probs=168.3
Q ss_pred EEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCC--C-Cccc
Q psy4956 44 TYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPIS--G-KYSG 120 (361)
Q Consensus 44 ~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~-~~~~ 120 (361)
.+...+....+.|.++.+...+.+++.|.|..|.......+.....|.+|.++.+...+.+++.|+|.+|.. + ++.+
T Consensus 150 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~ 229 (389)
T 2jll_A 150 KTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHH 229 (389)
T ss_dssp EEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEE
T ss_pred EEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEE
Confidence 333333456799999999998888899988775555444555556788888888888888999999997652 2 5779
Q ss_pred EEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccC----CCCCcceEEEeccC
Q psy4956 121 FKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK----PNTPGKFIVWFRNE 196 (361)
Q Consensus 121 y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~----p~~p~~l~~~~~~~ 196 (361)
|.|+|+..+...+ .......... .+.|.+|.+++.|.+++.|.+..|.+.++....+.+. |.+| .+.....+.
T Consensus 230 y~v~~~~~~~~~~-~~~~~~~~~~-~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p-~~~~~~~~~ 306 (389)
T 2jll_A 230 YQVDVKEVASEIW-KIVRSHGVQT-MVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP-SIHGQPSSG 306 (389)
T ss_dssp EEEEEEETTCSCC-EEEECSTTCS-EEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCC-CEEEEEETT
T ss_pred EEEEEEECCCccc-EEeeccCCcc-eEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCC-ccccccCcC
Confidence 9999988654333 3333333445 8999999999999999999999888765544445442 4455 566666788
Q ss_pred CeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEe
Q psy4956 197 TTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYR 275 (361)
Q Consensus 197 ~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~ 275 (361)
+++.|+|.++... +.+.+|.|.|+..+...+..... .......+.+.+|.|++.|.|+|+|.|..|.|.++...+.
T Consensus 307 ~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~~~ 383 (389)
T 2jll_A 307 KSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK---VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFS 383 (389)
T ss_dssp TEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCCE---ECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEEEE
T ss_pred CEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEee---ccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeEec
Confidence 9999999976433 67899999999855433321111 1334578999999999999999999999999999988887
Q ss_pred cCCC
Q psy4956 276 TIPL 279 (361)
Q Consensus 276 t~~~ 279 (361)
|.+.
T Consensus 384 T~~~ 387 (389)
T 2jll_A 384 MPPK 387 (389)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-21 Score=153.37 Aligned_cols=177 Identities=19% Similarity=0.368 Sum_probs=138.4
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CC-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SG-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..|.+|.++.+...+.+++.|+|++|. ++ .+.+|.|+|+..+... ........... .+.+.+|.|++.|.|+|+|
T Consensus 4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~-~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKA-YSTVATNCHKT-SWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSS-CEEEEEEECSS-EEEECCCCTTCEEEEEEEE
T ss_pred CCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCc-cEEeecCCCcc-EEEEcCCCCCCEEEEEEEE
Confidence 468889999999999999999999975 22 4789999998865433 33343444555 9999999999999999999
Q ss_pred EeCCCCcccceeeee---ccCCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCC
Q psy4956 165 VYDSKESVAYTSRNF---TTKPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~---~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~ 239 (361)
.+..|.+.++....+ ...|.+|.++.+...+.+++.|.|.++... +.+.+|.|.+...+...........
T Consensus 82 ~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----- 156 (197)
T 3lpw_A 82 ENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCATVK----- 156 (197)
T ss_dssp EETTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEEES-----
T ss_pred EcCccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeeccc-----
Confidence 998887765332222 334778899999989999999999876433 3789999999987665544433332
Q ss_pred CcEEEecCCCCCCeEEEEEEEEeCCCCCCceE
Q psy4956 240 PAQAAFKGLVPGRAYNISVQTVSEDEISTPTT 271 (361)
Q Consensus 240 ~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~ 271 (361)
.+.+.+.+|.|++.|.|+|+|.+..|.+.++.
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~ 188 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQNEKGISDPRQ 188 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEETTEECCCEE
T ss_pred ccEEEeCCcCCCCEEEEEEEEEeCCccCCCcc
Confidence 48899999999999999999999998876654
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.8e-19 Score=153.97 Aligned_cols=297 Identities=10% Similarity=0.030 Sum_probs=186.7
Q ss_pred cceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEE-EEEeCCEEEEEeeCCCCCCcccEEEEEEECC
Q psy4956 51 KDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSV-NVRSGKTAQIFWSPPISGKYSGFKLKVISLS 129 (361)
Q Consensus 51 ~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~-~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~ 129 (361)
...+.|.++.....-.+++.|.|..|..+....+.+...|........ .......+.|........ ...+.|...+
T Consensus 62 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p---~~~i~W~~~g 138 (389)
T 2jll_A 62 SSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNP---PASIHWRRDK 138 (389)
T ss_dssp EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEES---CCEEEEEETT
T ss_pred cceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecC---CCeEEEEECC
Confidence 568999999888776777777776645444444443322211111111 122334455554331110 1244444321
Q ss_pred CC----C-CCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEee
Q psy4956 130 EK----T-PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQ 204 (361)
Q Consensus 130 ~~----~-~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~ 204 (361)
.. . ............ .+.|.++.+...+.+++.|.+..|.............|.+|.++.+.....+++.|.|.
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~-~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~ 217 (389)
T 2jll_A 139 LVLPAKNTTNLKTYSTGRKM-ILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFN 217 (389)
T ss_dssp EESSCTTCTTEEEEECSSCE-EEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEE
T ss_pred ccCCcccCceEEEeccCCEE-EEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEe
Confidence 11 0 111111122223 68888998888888888888877765433333344557788889888888899999998
Q ss_pred cCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE-EEEecC----
Q psy4956 205 PSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT-AQYRTI---- 277 (361)
Q Consensus 205 ~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~-~~~~t~---- 277 (361)
++... ..+.+|.|.|...+...+..... ......+.+.+|.+++.|.++|.|.|..|.+.+.. ..+.+.
T Consensus 218 ~p~~~~g~pi~~y~v~~~~~~~~~~~~~~~----~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~ 293 (389)
T 2jll_A 218 KPDSHGGVPIHHYQVDVKEVASEIWKIVRS----HGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVRE 293 (389)
T ss_dssp CCSCCTTSCEEEEEEEEEETTCSCCEEEEC----STTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCC
T ss_pred CCCCCCCcceEEEEEEEEECCCcccEEeec----cCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCC
Confidence 76433 36779999999876544432221 23347899999999999999999999888765433 334443
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEE
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKT 356 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 356 (361)
|.+| .+.+ ...+.+++.|+|.++.. .+.+.+|.|+|+..+...+.. ........+++.+.+ |.|++.|.|+|+|
T Consensus 294 p~~p-~~~~--~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~-L~~~t~Y~~~V~A 368 (389)
T 2jll_A 294 PSPP-SIHG--QPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWL-EKKVQGNKDHIILEH-LQWTMGYEVQITA 368 (389)
T ss_dssp CCCC-CEEE--EEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCB-CCEECTTCCEEEECS-CCTTCEEEEEEEE
T ss_pred CCCC-cccc--ccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCccee-EeeccCCcceEEeCC-cCCCCEEEEEEEE
Confidence 3344 4555 56788999999998743 357899999999865433322 223445667899986 9999999999999
Q ss_pred EeCC
Q psy4956 357 VSGK 360 (361)
Q Consensus 357 ~~~~ 360 (361)
.+..
T Consensus 369 ~n~~ 372 (389)
T 2jll_A 369 ANRL 372 (389)
T ss_dssp EC-C
T ss_pred EcCC
Confidence 9863
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-20 Score=149.79 Aligned_cols=174 Identities=17% Similarity=0.170 Sum_probs=126.7
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCC-CCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
...|.+|.++.+.. +.+++.|+|+++... +.+.+|.|+|+.... ..+....... +...+.+.+ +|.|++.|.|+
T Consensus 3 ~~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~--~~~~~~~~~-~L~p~t~Y~~~ 78 (205)
T 1cfb_A 3 QDVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV--PNTDSSFVV-QMSPWANYTFR 78 (205)
T ss_dssp CCCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE--ETTCSEEEE-ECCSSEEEEEE
T ss_pred ccCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc--CCCceEEEE-eCCCCCEEEEE
Confidence 34588999999999 999999999987432 678999999986543 2222111111 223466777 99999999999
Q ss_pred EEEEeCCCCCCce--EEEEecCC----CCCccceEEeeecCCceEEEEeeCCC---CCCCceeEEEEEEECCCCCCCCce
Q psy4956 258 VQTVSEDEISTPT--TAQYRTIP----LRPLSFTYDKASITSNSLRVVWEPPK---GFSEFDKYQVSINVRRPGASSTPI 328 (361)
Q Consensus 258 V~a~~~~~~s~~~--~~~~~t~~----~~p~~l~~~~~~~~~~si~l~W~~~~---~~~~~~~y~i~~~~~~~~~~~~~~ 328 (361)
|.|.+..|.+.+. ...+.|.+ .+|.++.+ ...+.+++.|+|++|. ..+.+.+|.|.|+..+........
T Consensus 79 V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~--~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~ 156 (205)
T 1cfb_A 79 VIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVG--QGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN 156 (205)
T ss_dssp EEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEE--ECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE
T ss_pred EEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEe--ecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEE
Confidence 9999988876554 23444433 35678888 7888899999999875 235799999999988654322222
Q ss_pred eecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 329 TKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.......+++.+.+ |.|++.|.|+|+|.+..
T Consensus 157 ~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~~ 187 (205)
T 1cfb_A 157 NIFDWRQNNIVIAD-QPTFVKYLIKVVAINDR 187 (205)
T ss_dssp EECCTTCCEEEECS-CCSSCEEEEEEEEEETT
T ss_pred EecCCCccEEEEcC-CCCCcEEEEEEEEEcCC
Confidence 22233567999986 99999999999999863
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-20 Score=147.79 Aligned_cols=174 Identities=17% Similarity=0.161 Sum_probs=128.2
Q ss_pred eCCCceEEEEecCCCC----CCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccce
Q psy4956 6 HGVHGANLVIKIPENL----SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLT 81 (361)
Q Consensus 6 ~~~~~~~l~~~~p~~~----~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~ 81 (361)
.......|.|+.|... .+.+.+|+|+|+...+.......+... .++++|.+|.|++.|.|+|+|.++.|.+..+
T Consensus 16 ~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S 93 (211)
T 3p4l_A 16 LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANAT--TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWS 93 (211)
T ss_dssp CSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEES--SSEEEECSCCTTCEEEEEEEEEETTEECCCC
T ss_pred cCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCC--ceEEEecCcCCCCEEEEEEEEEcCCCCCccc
Confidence 3456677788876533 568999999999865543334444444 7899999999999999999999987544434
Q ss_pred eeEEEecC---CC-CCCccEEEEE--eCCEEEEEeeCCC--CCCcccEEEEEEECCCCCC--CeEEeecCCCCceEEEcC
Q psy4956 82 WTASITTP---PD-PPTNLSVNVR--SGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTP--PRIIGFTENPPAGYSLKD 151 (361)
Q Consensus 82 ~~~~~~t~---~~-~p~~l~~~~~--~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 151 (361)
....+.+. |. +|.++.+... +.+++.|+|++|. ++.+.+|.|.|+..+.... .....+..... .+.|.+
T Consensus 94 ~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~ 172 (211)
T 3p4l_A 94 MTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRL-THQIQE 172 (211)
T ss_dssp CCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEEEEESSCS-EEEECC
T ss_pred eeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEEEecCCee-EEEEcC
Confidence 44556553 44 6778888877 4789999999986 4679999999987544322 23344556666 999999
Q ss_pred CCCCcEEEEEEEEEeCCCCcccceeeeeccC
Q psy4956 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 152 L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~ 182 (361)
|.|++.|.|+|+|.+..|.+..+....+.+.
T Consensus 173 L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~ 203 (211)
T 3p4l_A 173 LTLDTPYYFKIQARNSKGMGPMSEAVQFRTP 203 (211)
T ss_dssp CCTTCEEEEEEEEEETTEECCCCCCEEEECC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEccCc
Confidence 9999999999999999988876665555554
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.4e-20 Score=155.23 Aligned_cols=213 Identities=16% Similarity=0.154 Sum_probs=149.0
Q ss_pred cceEEecCCCC-CceEEEEEEEecCCcCc--cceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEE
Q psy4956 51 KDNIEFSEGLP-GTKYDFYLYYTNSTVHD--WLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVI 126 (361)
Q Consensus 51 ~~~~~i~~L~p-~t~Y~i~V~a~~~~~~~--~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~ 126 (361)
...+.|.++.. ...|.+.+.. .+... .....+.....|.+|.++.....+.+++.|+|++|.+ +...+|.|+|+
T Consensus 64 ~~~L~i~~~~~~~g~Y~C~a~~--~g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~ 141 (303)
T 1i1r_A 64 ASSVTFTDIASLNIQLTCNILT--FGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSE 141 (303)
T ss_dssp EEEEEECSCCCSEEEEEEEEEE--TTTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEE
T ss_pred EEEEEEcCcCCCceEEEEeccc--CCCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEE
Confidence 45789999876 4567776633 21111 1122344556789999999888777899999999863 34579999998
Q ss_pred ECCCCCCCeEEeecCCCCceEEEcCC-CCCcEEEEEEEEEeCCCCcccce-eeee--ccCCCCCcceEEEec--cCCeEE
Q psy4956 127 SLSEKTPPRIIGFTENPPAGYSLKDL-TPGGSYQVQLFSVYDSKESVAYT-SRNF--TTKPNTPGKFIVWFR--NETTLL 200 (361)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~~~Y~v~v~a~~~~~~s~~~~-~~~~--~t~p~~p~~l~~~~~--~~~~~~ 200 (361)
.... ....+........ .+.|.+| .|++.|.|+|.|.+..|.+.+.. .... ...|.+|.++.+... +.+++.
T Consensus 142 ~~~~-~~~~~~~~~~~~~-~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~ 219 (303)
T 1i1r_A 142 WATH-KFADCKAKRDTPT-SCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILK 219 (303)
T ss_dssp ETTE-ECCCEECCSSCTT-EEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEE
T ss_pred ecCC-CCccCCCcCCCce-EEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEE
Confidence 7542 2223333344455 9999999 99999999999999887764311 1111 134788999988754 668999
Q ss_pred EEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCC
Q psy4956 201 VLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST 268 (361)
Q Consensus 201 v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~ 268 (361)
|+|+++... +.+.+|.|.|+..+...+.. +...........+.+.+|.|++.|.|+|+|.+..|.+.
T Consensus 220 l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~-~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~ 287 (303)
T 1i1r_A 220 LTWTNPSIKSVIILKYNIQYRTKDASTWSQ-IPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGY 287 (303)
T ss_dssp EEEECCGGGGTSCEEEEEEEEETTCSSCEE-CCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSC
T ss_pred EEECCCCCCCcccEEEEEEEEeCCCCCceE-EccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCC
Confidence 999987433 66899999999876544432 11111123457899999999999999999999877654
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-20 Score=150.72 Aligned_cols=174 Identities=16% Similarity=0.222 Sum_probs=128.1
Q ss_pred CCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEE
Q psy4956 7 GVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86 (361)
Q Consensus 7 ~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~ 86 (361)
......|.|+.| .+.+.+|+|+|+...+.......+... .++++|.+|.|++.|.|+|+|.+..|.+..+....+
T Consensus 18 ~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~ 92 (234)
T 3f7q_A 18 GSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHLLDSK--VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSC 92 (234)
T ss_dssp SSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEEEEES--SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEE
T ss_pred CCCEEEEEEECC---CCccceEEEEEEECCCCccceEEEcCC--ccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEE
Confidence 445666777777 468999999999754433223344434 789999999999999999999987654444445556
Q ss_pred ecC---CCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCC----CeEEeec-CCCCceEEEcCCCCCc
Q psy4956 87 TTP---PDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTP----PRIIGFT-ENPPAGYSLKDLTPGG 156 (361)
Q Consensus 87 ~t~---~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~----~~~~~~~-~~~~~~~~l~~L~p~~ 156 (361)
.+. |.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+.... .....+. .... .+.|.+|.|++
T Consensus 93 ~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t 171 (234)
T 3f7q_A 93 RTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNR-MLLIENLRESQ 171 (234)
T ss_dssp ECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCC-EEEEECCCTTC
T ss_pred EcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceEEEecCCcce-EEEeCCCCCCC
Confidence 554 6677899999889999999999886 4678999999998654322 1222222 2334 89999999999
Q ss_pred EEEEEEEEEeCCCCcccce-eeeeccCCCCC
Q psy4956 157 SYQVQLFSVYDSKESVAYT-SRNFTTKPNTP 186 (361)
Q Consensus 157 ~Y~v~v~a~~~~~~s~~~~-~~~~~t~p~~p 186 (361)
.|.|+|+|.+..|.+..+. ...++|.+.+|
T Consensus 172 ~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P 202 (234)
T 3f7q_A 172 PYRYTVKARNGAGWGPEREAIINLATQPKRP 202 (234)
T ss_dssp CEEEEEEEEETTEECCCEEEEECGGGSCCCC
T ss_pred eEEEEEEEECCCccCCCcCceeEeecCCCCC
Confidence 9999999999998887654 35667765444
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.9e-20 Score=146.83 Aligned_cols=164 Identities=20% Similarity=0.249 Sum_probs=121.9
Q ss_pred CCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEe
Q psy4956 8 VHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASIT 87 (361)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~ 87 (361)
.+...|.|+.| .++.+.+|+|+|+...+... ...+....+.+++.|.+|.|++.|.|+|+|.+..|.+. .....+.
T Consensus 15 ~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~-~~~~~~~ 90 (201)
T 2ha1_A 15 PNSHPIQWNAP--QPSHISKYILRWRPKNSVGR-WKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQE-VTRFDFT 90 (201)
T ss_dssp SSCEEEEEECC--SSTTCCEEEEEEEETTCSSC-CEEEEECTTCCEEEECSCCTTEEEEEEEEEECTTSCEE-EEEEEEE
T ss_pred CCEEEEEEeCC--CCCCceEEEEEEEECCCCCc-eEEEecCCCccEEEecCCCCCCEEEEEEEEEecccccC-ceeEEEe
Confidence 44666777766 45789999999997544221 33444444478999999999999999999998764443 3223332
Q ss_pred cC--------------CCC-C----CccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEE
Q psy4956 88 TP--------------PDP-P----TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYS 148 (361)
Q Consensus 88 t~--------------~~~-p----~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (361)
+. +.+ | .++.+...+.+++.|+|.+| .+.+.+|+|.|+..+...+.....+..... ++.
T Consensus 91 t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p-~~~i~~Y~v~~~~~~~~~~~~~~~v~~~~~-~~~ 168 (201)
T 2ha1_A 91 TTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA-SDTVSGFRVEYELSEEGDEPQYLDLPSTAT-SVN 168 (201)
T ss_dssp ECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS-CTTEEEEEEEEEETTTCCCCEEEEEETTCC-EEE
T ss_pred cCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC-CCCccEEEEEEEECCCCCceeEEEcCCcee-EEE
Confidence 21 222 2 46677778889999999998 578999999999765445666677777777 999
Q ss_pred EcCCCCCcEEEEEEEEEeCCCCcccceee
Q psy4956 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSR 177 (361)
Q Consensus 149 l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~ 177 (361)
|.+|.|++.|.|+|+|.+..|.+.+....
T Consensus 169 i~~L~p~t~Y~~~V~A~~~~G~~~~~s~~ 197 (201)
T 2ha1_A 169 IPDLLPGRKYIVNVYQISEDGEQSLILST 197 (201)
T ss_dssp ECSCCTTCEEEEEEEEEETTSCEEEEEEE
T ss_pred eCCCCCCCEEEEEEEEEcCCCCcccEeeE
Confidence 99999999999999999999988764443
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-20 Score=148.46 Aligned_cols=170 Identities=14% Similarity=0.082 Sum_probs=126.9
Q ss_pred ceEEEEecCCCCCC-CcceEEEEEEcCCCCCCCCeEEeec--CccceEEecCCCCCceEEEEEEEecCCcCccceeeEEE
Q psy4956 10 GANLVIKIPENLSS-DNSTYRLDYIPAHGHPPPNTTYVSR--DIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI 86 (361)
Q Consensus 10 ~~~l~~~~p~~~~~-~~~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~ 86 (361)
...|.|..|...++ ++.+|+|+|+...+..+........ ...++++|.+|.|++.|.|+|+|.+..|.+..+....+
T Consensus 23 s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~ 102 (209)
T 2vkw_A 23 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEF 102 (209)
T ss_dssp CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEE
T ss_pred eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccc
Confidence 46888888876666 5999999999855433212212111 12569999999999999999999987754443344445
Q ss_pred ec----CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 87 TT----PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 87 ~t----~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
.+ .|.+|.++.+...+.+++.|+|++|. ++.+.+|.|+|+. ....+.....+..... ++.|.+|.|++.|.|
T Consensus 103 ~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~ 180 (209)
T 2vkw_A 103 KTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWKPEIRLPSGSD-HVMLKSLDWNAEYEV 180 (209)
T ss_dssp ECCCSCSCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCCCCEEECTTCC-EEEECSCCTTCEEEE
T ss_pred cccCCCCCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCceeeecCCCcc-EEEecCCCCCCEEEE
Confidence 55 36777777777778899999999984 5678999999998 4445555556666666 999999999999999
Q ss_pred EEEEEeCCCCcccceeeeecc
Q psy4956 161 QLFSVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 161 ~v~a~~~~~~s~~~~~~~~~t 181 (361)
+|+|.+..|.|.++....+++
T Consensus 181 ~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 181 YVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EEEEEETTEECCCEEEEEECC
T ss_pred EEEEEeCCccCCcchhhhhhh
Confidence 999999999887765555444
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-19 Score=143.89 Aligned_cols=170 Identities=21% Similarity=0.273 Sum_probs=130.1
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-C-cceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-S-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.++.+...+.+++.|+|+++... + .+.+|.|.+...+.......... .....+.+.+|.|++.|.|+|
T Consensus 4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~----~~~~~~~~~~L~p~t~Y~~~V 79 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN----CHKTSWKVDQLQEGCSYYFRV 79 (197)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE----ECSSEEEECCCCTTCEEEEEE
T ss_pred CCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC----CCccEEEEcCCCCCCEEEEEE
Confidence 45788999999999999999999987423 3 48899999988765444332221 224889999999999999999
Q ss_pred EEEeCCCCCCceE----EEEecCCCCCccceEEeeecCCceEEEEeeCCCCC--CCceeEEEEEEECCCCCCCCceeecC
Q psy4956 259 QTVSEDEISTPTT----AQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF--SEFDKYQVSINVRRPGASSTPITKSR 332 (361)
Q Consensus 259 ~a~~~~~~s~~~~----~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~--~~~~~y~i~~~~~~~~~~~~~~~~~~ 332 (361)
.|.+..|.+.+.. ......|.+|.++.+ ...+.+++.|+|.+|... +.+.+|.|.|...+..... ....
T Consensus 80 ~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~--~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~---~~~~ 154 (197)
T 3lpw_A 80 LAENEYGIGLPAETAESVKASERPLPPGKITL--MDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWA---TCAT 154 (197)
T ss_dssp EEEETTEECCCEECSSCEESCCCCCCCSCEEE--EEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCE---EEEE
T ss_pred EEEcCccccCCCCCccceecCCCCCCCcccEE--EeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceE---Eeec
Confidence 9999888775543 233445778889998 788899999999987532 3789999999987643221 1123
Q ss_pred CCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 333 DEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 333 ~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
...+++++.+ |.|++.|.|+|+|++..
T Consensus 155 ~~~~~~~~~~-L~p~t~Y~~~V~A~n~~ 181 (197)
T 3lpw_A 155 VKVTEATITG-LIQGEEYSFRVSAQNEK 181 (197)
T ss_dssp ESSSEEEECC-CCTTCEEEEEEEEEETT
T ss_pred ccccEEEeCC-cCCCCEEEEEEEEEeCC
Confidence 3567899986 99999999999999863
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-20 Score=150.22 Aligned_cols=183 Identities=19% Similarity=0.228 Sum_probs=131.5
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEe--ec----------CCCCceEEEcCCCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIG--FT----------ENPPAGYSLKDLTPG 155 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~--~~----------~~~~~~~~l~~L~p~ 155 (361)
+.||.++.+...+.+++.|+|++|.. +.+.+|.|+|+..+.....+... ++ .... .+.+.+|.|+
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~ 80 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSF-TASVTDLKPQ 80 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEE-EEEECSCCTT
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcce-eEEecCCcCC
Confidence 56788888888999999999998763 67899999999864322222111 11 1223 7899999999
Q ss_pred cEEEEEEEEEeCCCCcccce-ee--eecc-----CCCCCcceEEEeccCCeEEEEeecCC--CCCcceEEEEEEeCCCC-
Q psy4956 156 GSYQVQLFSVYDSKESVAYT-SR--NFTT-----KPNTPGKFIVWFRNETTLLVLWQPSY--PASIYTHYKVSIDPPDA- 224 (361)
Q Consensus 156 ~~Y~v~v~a~~~~~~s~~~~-~~--~~~t-----~p~~p~~l~~~~~~~~~~~v~W~~~~--~~~~~~~y~v~~~~~~~- 224 (361)
+.|.|+|+|.+..|.+..+. .. ...+ .|.+|.++.+...+.+++.|+|+++. ..+.+.+|.|.|+..+.
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~ 160 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA 160 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCC
Confidence 99999999999877654322 11 1111 13457888888888999999999874 33789999999987665
Q ss_pred CCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE-EEEec
Q psy4956 225 PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT-AQYRT 276 (361)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~-~~~~t 276 (361)
........ . ....+.+.+.+|.|++.|.|+|+|.+..|.+..+. +.+.|
T Consensus 161 ~~~~~~~~-~--~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T 210 (214)
T 2ibg_A 161 GEYFKATI-E--GAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRT 210 (214)
T ss_dssp SCCEEEEE-E--CTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEEC
T ss_pred cceEEeec-c--CCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEe
Confidence 33322211 1 22347899999999999999999999988776543 34444
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-20 Score=155.86 Aligned_cols=245 Identities=14% Similarity=0.124 Sum_probs=146.1
Q ss_pred CceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEE--eecCccceEEec--CCCCCceEEEEEEEecCCcCcccee-e
Q psy4956 9 HGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTY--VSRDIKDNIEFS--EGLPGTKYDFYLYYTNSTVHDWLTW-T 83 (361)
Q Consensus 9 ~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~~i~--~L~p~t~Y~i~V~a~~~~~~~~~~~-~ 83 (361)
....|.|+.|....+++. |.|+|+...... ...+ +..-..+.+.|. +|.|++.|.|+|+|.+ .+ .+... .
T Consensus 17 ~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~--W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A~n-~~-~S~~s~~ 91 (306)
T 3s98_A 17 DNFILRWNRSDESVGNVT-FSFDYQKTGMDN--WIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEK-EN-TSSWYEV 91 (306)
T ss_dssp TEEEEECC--------CE-EEEEEEESSCSS--CEECTTCSSBSSSEEECCC---CTTSCEEEEEEEEC-SS-CEEEEEC
T ss_pred CeEEEEEcCCCCCCCCeE-EEEEEEECCCCC--cEECCCccCCCCCEEEccccccCCCCcEEEEEEEEe-CC-cCCCEee
Confidence 335677777776666776 999999843222 2211 111124566665 5689999999999999 53 33322 2
Q ss_pred EEEe----cCCCCCCccEEEEEeCCEEEEEeeCCCC--------CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcC
Q psy4956 84 ASIT----TPPDPPTNLSVNVRSGKTAQIFWSPPIS--------GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151 (361)
Q Consensus 84 ~~~~----t~~~~p~~l~~~~~~~~~v~l~W~~p~~--------~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 151 (361)
..+. +.+.||. +.+.. ..+++.|+|+|+.. +.+.+|+|.|+..+.... ... ....+ .+.|.+
T Consensus 92 ~~f~~~~~~~~~pP~-v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~-~~~--~~~~~-~~~l~~ 165 (306)
T 3s98_A 92 DSFTPFRKAQIGPPE-VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVE-ERI--ENIYS-RHKIYK 165 (306)
T ss_dssp CCBCHHHHCBCCCCE-EEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEETTTCCC-EEE--EEECT-EEEECS
T ss_pred eeEechhhCccCCCe-EEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCe-EEE--ecccc-eEEEcc
Confidence 3332 2455564 77665 44689999997642 457789999988654332 222 22345 899999
Q ss_pred CCCCcEEEEEEEEEe--CCCCcccceeeeeccC----CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCC---
Q psy4956 152 LTPGGSYQVQLFSVY--DSKESVAYTSRNFTTK----PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPP--- 222 (361)
Q Consensus 152 L~p~~~Y~v~v~a~~--~~~~s~~~~~~~~~t~----p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~--- 222 (361)
|.|++.|.|+|+|.+ ..|.+..+....++|. +.+|.++.+... .+++.|.|+++... .+|.+.+...
T Consensus 166 L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~-~~s~~l~W~~p~~~---~~~~v~~~~gy~~ 241 (306)
T 3s98_A 166 LSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-NQNYVLKWDYTYAN---MTFQVQWLHAFLK 241 (306)
T ss_dssp CCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEE-TTEEEEEEECSSSS---CEEEEEEEEGGGG
T ss_pred CCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEe-cCEEEEEeCCCCCc---EEEEEEEehhhhh
Confidence 999999999999999 4555554444455443 256889988655 47899999986422 3555555421
Q ss_pred -----CCCCceeEEeeccCCCCCcEEEecC-CCCCCeEEEEEEEEeCCCCCCce
Q psy4956 223 -----DAPESVLYVEKEGEPPGPAQAAFKG-LVPGRAYNISVQTVSEDEISTPT 270 (361)
Q Consensus 223 -----~~~~~~~~~~~~~~~~~~~~~~~~~-L~p~t~Y~v~V~a~~~~~~s~~~ 270 (361)
+...+.. .... .....+.+.+.+ |.+...|.|+|+|.++.+.|..+
T Consensus 242 ~~~~~~~~~W~~-~~~c-~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s 293 (306)
T 3s98_A 242 RNPGNHLYKWKQ-IPDC-ENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWS 293 (306)
T ss_dssp SCC----CCCEE-CGGG-TTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCC
T ss_pred ccccccccCceE-CCCc-eeCCCccccCchhhcccCCEEEEEEEccCCCccccc
Confidence 1222221 0011 122346777777 45555999999999988866544
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-19 Score=150.45 Aligned_cols=247 Identities=13% Similarity=0.079 Sum_probs=158.3
Q ss_pred EeCCCceEEEEecCCCC-CCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEec---CCcCccc
Q psy4956 5 VHGVHGANLVIKIPENL-SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTN---STVHDWL 80 (361)
Q Consensus 5 ~~~~~~~~l~~~~p~~~-~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~---~~~~~~~ 80 (361)
........|.|+.|... .+...+|+|.|.... ...+. ...+.+.+|.++..|.|+|+|.. +.|..+.
T Consensus 14 ~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~~-----~~~~~----~~~~~~~~~~~~~~y~~~V~a~~~~~~~g~~s~ 84 (314)
T 3bpo_C 14 VENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQ-----DKKIA----PETRRSIEVPLNERICLQVGSQCSTNESEKPSI 84 (314)
T ss_dssp EETTTEEEEEEECCSSCCCSSCCCEEECCC--C-----CCEEE----SSSEEEEECCCSSCEEEEEEECC---------C
T ss_pred eCCceEEEEEEcCCCCCCCCceEEEEEEecccC-----ceEec----cccEEEEEEcCCCcEEEEEEEEecCCCCCCCCc
Confidence 34455778888888766 567889999885411 22232 24466788999999999999943 2222222
Q ss_pred eeeEEEe----cCCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEE--eecCCCCceEEEcCCC
Q psy4956 81 TWTASIT----TPPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRII--GFTENPPAGYSLKDLT 153 (361)
Q Consensus 81 ~~~~~~~----t~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~~~~l~~L~ 153 (361)
.....+. .+|.+|.++.....+.+.+.++|.++. .+...+|.|.|+..+...+..+. ....... .+.+..+.
T Consensus 85 ~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~~-~c~~~~~~ 163 (314)
T 3bpo_C 85 LVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTSPDTNYTLYYWHRSLEKIHQCENIFREGQYF-GCSFDLTK 163 (314)
T ss_dssp CEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC---CCCCEEEEEEESSCSSCEECCCEEEETTEE-EEEEECCC
T ss_pred CeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCCCCCccEEEEEEeCCCCccccCcCeecCCCeE-EEEECCCC
Confidence 2221221 245678899888888899999999976 34578999998875432222221 1222223 67777665
Q ss_pred ----CCcEEEEEEEEEeCCCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCC
Q psy4956 154 ----PGGSYQVQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDA 224 (361)
Q Consensus 154 ----p~~~Y~v~v~a~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~ 224 (361)
..+.|.|+|.|.+..|.+... ...+. ..|.+|.++.+. ...+++.|+|++|.. .+.+..|.|+|+..+.
T Consensus 164 ~~~~~~~~y~~~V~a~n~~G~~~~~-~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~ 241 (314)
T 3bpo_C 164 VKDSSFEQHSVQIMVKDNAGKIKPS-FNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQT 241 (314)
T ss_dssp --------CCEEEEEEETTSCSCCE-EEEECSSSSEECCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--C
T ss_pred ccccceeEEEEEEEEEcCCCceecc-cEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCC
Confidence 478999999999987666432 22222 238899999997 677899999998753 3456799999998765
Q ss_pred CCceeE-Ee--------eccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 225 PESVLY-VE--------KEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 225 ~~~~~~-~~--------~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
..+... .. ........+.+.+.+|.|++.|.|+|+|.+.
T Consensus 242 ~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~ 289 (314)
T 3bpo_C 242 ETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTN 289 (314)
T ss_dssp CCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEEC
T ss_pred CcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeec
Confidence 544321 11 0001123478899999999999999999984
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.9e-20 Score=146.67 Aligned_cols=190 Identities=20% Similarity=0.208 Sum_probs=136.5
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCC-CCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDL-TPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~p~~~Y~v~v~a~ 165 (361)
..|.+|.+|.+...+.+++.|+|++|.. +...+|.|+|+.... ....+........ .+.|.+| .+++.|.|+|.|.
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~-~~~~~~~~~~~~~-~~~i~~L~~~~t~Y~~~V~A~ 83 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATH-KFADCKAKRDTPT-SCTVDYSTVYFVNIEVWVEAE 83 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTE-ECCCEECCSSCTT-EEECSSCCCTTSCEEEEEEEE
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCC-CccccccccCCcc-eEEEcCCccccccEEEEEEEE
Confidence 4688899999988888899999999873 335799999987543 2233333444455 9999999 9999999999999
Q ss_pred eCCCCcccceeeeec----cCCCCCcceEEEec--cCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCC
Q psy4956 166 YDSKESVAYTSRNFT----TKPNTPGKFIVWFR--NETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPP 238 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~--~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~ 238 (361)
+..|.+.. ....+. ..|.+|.++.+... +.+++.|+|+++... +.+.+|.|.|+..+...+.. +.......
T Consensus 84 n~~G~~~s-~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~-~~~~~~~~ 161 (215)
T 1bqu_A 84 NALGKVTS-DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQ-IPPEDTAS 161 (215)
T ss_dssp ETTEEEEC-CCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEE-CCGGGGCS
T ss_pred ecccCccC-CcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceE-eccccccC
Confidence 98877642 112221 24788999998765 678999999976433 66899999999876444332 11111133
Q ss_pred CCcEEEecCCCCCCeEEEEEEEEeCCCCCC---ce-EEEEecCCCCC
Q psy4956 239 GPAQAAFKGLVPGRAYNISVQTVSEDEIST---PT-TAQYRTIPLRP 281 (361)
Q Consensus 239 ~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~---~~-~~~~~t~~~~p 281 (361)
..+.+.|.+|.|++.|.|+|+|.+..|.+. .+ .+.+.|.+.+|
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P 208 (215)
T 1bqu_A 162 TRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRP 208 (215)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHH
T ss_pred ccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccCC
Confidence 458899999999999999999999776542 22 34556665554
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-19 Score=161.02 Aligned_cols=188 Identities=19% Similarity=0.301 Sum_probs=133.7
Q ss_pred eEEEecCCCCCCccEEEEEeCCEEEEEeeCCCC--C-CcccEEEEEEECCCCC--------CCeEE--eecCCCCceEEE
Q psy4956 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPIS--G-KYSGFKLKVISLSEKT--------PPRII--GFTENPPAGYSL 149 (361)
Q Consensus 83 ~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~-~~~~y~v~~~~~~~~~--------~~~~~--~~~~~~~~~~~l 149 (361)
.......|.+|.++.. ..+.+++.|+|++|.. + .+.+|.|.|+...... ..... ....... ++.|
T Consensus 327 ~~~ct~pPsaP~nl~~-~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~t-s~tI 404 (536)
T 3fl7_A 327 SMPCTRPPSAPHYLTA-VGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRT-SVTV 404 (536)
T ss_dssp TSCCBCCCCCBSCEEE-ECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSS-EEEE
T ss_pred ccccccCCCcccceEE-EecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccc-eeEe
Confidence 3444567889999854 6788999999999872 2 5889999998743211 01111 1112344 8999
Q ss_pred cCCCCCcEEEEEEEEEeCCCC---cccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCC
Q psy4956 150 KDLTPGGSYQVQLFSVYDSKE---SVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAP 225 (361)
Q Consensus 150 ~~L~p~~~Y~v~v~a~~~~~~---s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~ 225 (361)
.+|.|++.|.|+|.|.+..+. +..+....++|.+.+|..+.+...+.+++.|+|++|.. .+.+.+|.|.|...+..
T Consensus 405 ~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~ 484 (536)
T 3fl7_A 405 SDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDS 484 (536)
T ss_dssp ECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--C
T ss_pred CCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCC
Confidence 999999999999999998776 33445667778888888888888888999999997743 37899999999876554
Q ss_pred CceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCce-EEEEecC
Q psy4956 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPT-TAQYRTI 277 (361)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~-~~~~~t~ 277 (361)
........ ..+++.|.+|.|++.|.|+|+|.+..|.++.+ .+.+.|.
T Consensus 485 ~~~~~v~~-----~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~ 532 (536)
T 3fl7_A 485 NSYNVRRT-----EGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTL 532 (536)
T ss_dssp CCCEEEEE-----SSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECC
T ss_pred ceEEEEcC-----CCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeC
Confidence 22222222 24899999999999999999999998877544 3445553
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-19 Score=150.06 Aligned_cols=203 Identities=10% Similarity=0.119 Sum_probs=140.0
Q ss_pred eEEEcCCCC-CcEEEEEEEEEeCCCCcc--cceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCC
Q psy4956 146 GYSLKDLTP-GGSYQVQLFSVYDSKESV--AYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPP 222 (361)
Q Consensus 146 ~~~l~~L~p-~~~Y~v~v~a~~~~~~s~--~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~ 222 (361)
.+.|.++.. ...|.+.+. +.+.... ..........|.+|.+|.+...+.+++.|+|+++...+...+|.|.++..
T Consensus 66 ~L~i~~~~~~~g~Y~C~a~--~~g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~ 143 (303)
T 1i1r_A 66 SVTFTDIASLNIQLTCNIL--TFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWA 143 (303)
T ss_dssp EEEECSCCCSEEEEEEEEE--ETTTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEET
T ss_pred EEEEcCcCCCceEEEEecc--cCCCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEec
Confidence 577777764 356766553 3322211 11122234458889999998888889999999876555567999999765
Q ss_pred CCCCceeEEeeccCCCCCcEEEecCC-CCCCeEEEEEEEEeCCCCCCceEEEE----ecCCCCCccceEEeeec--CCce
Q psy4956 223 DAPESVLYVEKEGEPPGPAQAAFKGL-VPGRAYNISVQTVSEDEISTPTTAQY----RTIPLRPLSFTYDKASI--TSNS 295 (361)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~L-~p~t~Y~v~V~a~~~~~~s~~~~~~~----~t~~~~p~~l~~~~~~~--~~~s 295 (361)
++..... .. .....+.+.+.+| .|++.|.|+|.|.|..|.+.+....+ ...|.+|.++.+ ... +.++
T Consensus 144 ~~~~~~~-~~---~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v--~~~~~~~~s 217 (303)
T 1i1r_A 144 THKFADC-KA---KRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSV--INSEELSSI 217 (303)
T ss_dssp TEECCCE-EC---CSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEE--ECCSSSSSC
T ss_pred CCCCccC-CC---cCCCceEEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEE--EEecCCCCE
Confidence 4322111 11 1344588999999 99999999999999888664322222 235788998888 443 6789
Q ss_pred EEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeec---CCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 296 LRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKS---RDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 296 i~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
+.|+|++|.. .+.+.+|+|+|+..+...+ ..... ....+++.+.+ |.|++.|.|+|+|.+.
T Consensus 218 v~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w--~~~~~~~~~~~~~~~~l~~-L~p~t~Y~~rV~A~n~ 282 (303)
T 1i1r_A 218 LKLTWTNPSIKSVIILKYNIQYRTKDASTW--SQIPPEDTASTRSSFTVQD-LKPFTEYVFRIRCMKE 282 (303)
T ss_dssp EEEEEECCGGGGTSCEEEEEEEEETTCSSC--EECCGGGGCSCCSEEEECS-CCTTCEEEEEEEEEET
T ss_pred EEEEECCCCCCCcccEEEEEEEEeCCCCCc--eEEccccCCCceeEEEeCC-CCCCCEEEEEEEeccC
Confidence 9999999743 2478999999998864222 21211 34567899986 9999999999999974
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-19 Score=143.86 Aligned_cols=170 Identities=11% Similarity=0.157 Sum_probs=125.4
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCC-CCCCeEEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL-VPGRAYNISVQ 259 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~p~t~Y~v~V~ 259 (361)
..|.+|.+|.+...+.+++.|+|+++...+...+|.|.|+..++..... .. .....+.+.|.+| .+++.|.|+|.
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~~~-~~---~~~~~~~~~i~~L~~~~t~Y~~~V~ 81 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADC-KA---KRDTPTSCTVDYSTVYFVNIEVWVE 81 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCE-EC---CSSCTTEEECSSCCCTTSCEEEEEE
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCcccc-cc---ccCCcceEEEcCCccccccEEEEEE
Confidence 4578899999998888999999998765555579999997654322111 11 1334588999999 99999999999
Q ss_pred EEeCCCCCCceEEEEe----cCCCCCccceEEeeec--CCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceee--
Q psy4956 260 TVSEDEISTPTTAQYR----TIPLRPLSFTYDKASI--TSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITK-- 330 (361)
Q Consensus 260 a~~~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~--~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~-- 330 (361)
|.|..|.+.+....+. ..|.+|.++.+ ... +.+++.|+|++|.. .+.+.+|+|+|+..+...+ ....
T Consensus 82 A~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~--~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~--~~~~~~ 157 (215)
T 1bqu_A 82 AENALGKVTSDHINFDPVYKVKPNPPHNLSV--INSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTW--SQIPPE 157 (215)
T ss_dssp EEETTEEEECCCEEECGGGSEECCCCEEEEE--ECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSC--EECCGG
T ss_pred EEecccCccCCcEEecccccCcCCCCCceEE--EEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCc--eEeccc
Confidence 9998876543222222 35778899888 444 77899999998743 2368999999998763222 1111
Q ss_pred -cCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 331 -SRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 331 -~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.....+++++.+ |+|++.|.|+|+|.+.
T Consensus 158 ~~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~ 186 (215)
T 1bqu_A 158 DTASTRSSFTVQD-LKPFTEYVFRIRCMKE 186 (215)
T ss_dssp GGCSCCSEEEECS-CCSSEEEEEEEEEEET
T ss_pred cccCccceEEeCC-CCCCCEEEEEEEEccC
Confidence 145667999986 9999999999999974
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.8e-19 Score=141.12 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=124.9
Q ss_pred CCCceEEEEecCCCCCCCcceEEEEEEcCCC-CCCC--CeEEee--------cCccceEEecCCCCCceEEEEEEEecCC
Q psy4956 7 GVHGANLVIKIPENLSSDNSTYRLDYIPAHG-HPPP--NTTYVS--------RDIKDNIEFSEGLPGTKYDFYLYYTNST 75 (361)
Q Consensus 7 ~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~-~~~~--~~~~~~--------~~~~~~~~i~~L~p~t~Y~i~V~a~~~~ 75 (361)
..+...|.|+.|...++.+.+|+|+|+.... ..+. ...++. .....++++.+|.|++.|.|+|+|.+..
T Consensus 14 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 93 (214)
T 2ibg_A 14 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSN 93 (214)
T ss_dssp ETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEEEETT
T ss_pred cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEEEEEEEEEecC
Confidence 5567788888888878899999999998432 1110 111210 0236789999999999999999999865
Q ss_pred cCc--cc-eeeEEEec-----CCCCCCccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecC-CC
Q psy4956 76 VHD--WL-TWTASITT-----PPDPPTNLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTE-NP 143 (361)
Q Consensus 76 ~~~--~~-~~~~~~~t-----~~~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~-~~ 143 (361)
|.. +. .......+ .+.+|.++.+...+.+++.|+|++|. ++.+.+|.|+|+..+.........+.. ..
T Consensus 94 g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 173 (214)
T 2ibg_A 94 NDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHA 173 (214)
T ss_dssp SCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTC
T ss_pred CCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeeccCCcc
Confidence 332 22 11122222 23457888888888999999999984 367899999999876523334444433 34
Q ss_pred CceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccC
Q psy4956 144 PAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 144 ~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~ 182 (361)
+ .+.|.+|.|++.|.|+|+|.+..|.+..+....++|.
T Consensus 174 ~-~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 211 (214)
T 2ibg_A 174 R-SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQ 211 (214)
T ss_dssp C-EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred e-EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEec
Confidence 5 8999999999999999999999988876666666664
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=8e-17 Score=136.78 Aligned_cols=225 Identities=14% Similarity=0.101 Sum_probs=145.5
Q ss_pred ceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEe-CCEEEEEeeCCCCC-CcccEEEEEEECC
Q psy4956 52 DNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRS-GKTAQIFWSPPISG-KYSGFKLKVISLS 129 (361)
Q Consensus 52 ~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~-~~~v~l~W~~p~~~-~~~~y~v~~~~~~ 129 (361)
..++|.++.......+.+.+.++.+.......+....+|.+|.++...... .+++.++|+++.++ ....|.|.|+...
T Consensus 61 ~~L~i~~~~~~d~g~y~c~~~~~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~ 140 (313)
T 2d9q_B 61 SIITLPHLNHTQAFLSCSLNWGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSR 140 (313)
T ss_dssp EEEEESCCCSSEEEEEEEEESSSSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECC
T ss_pred EEEEEeccCCCccceEEeeecCCCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecC
Confidence 679999998876544444454332111122334444578899999887774 68999999997743 3457999998754
Q ss_pred CCCC---CeEEeec--CCCCceEEEc--CCCCCcEEEEEEEEEeCCCCcccceeeeec----cCCCCCcceEEEec----
Q psy4956 130 EKTP---PRIIGFT--ENPPAGYSLK--DLTPGGSYQVQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFR---- 194 (361)
Q Consensus 130 ~~~~---~~~~~~~--~~~~~~~~l~--~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~---- 194 (361)
.... .....+. .... .+.+. +|.+++.|.|+|.|.|..|.+.. ....+. ..|.+|.++.+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s-~~~~~~~~~~~~p~pP~~~~~~~~~~~~ 218 (313)
T 2d9q_B 141 GNCQTQGDSILDCVPKDGQS-HCSIPRKHLLLYQNMGIWVQAENALGTSMS-PQLCLDPMDVVKLEPPMLRTMDPSPEAA 218 (313)
T ss_dssp TTSCSCCCCEEEECCCTTCS-EEEEEGGGCCSSSCEEEEEEEEETTEEEEC-CCEEECGGGGEECCCCEEEECCC-----
T ss_pred CCcccCCcccccCCCCCCCc-EEEECccccccceeEEEEEEEECCCCCccC-ccEEEehhheeccCcCceeEEEEecccc
Confidence 3211 1122222 2233 66664 59999999999999998876532 112222 23888999888765
Q ss_pred --cCCeEEEEeecCCCCCc-ceEEEEEEe-CCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCC--
Q psy4956 195 --NETTLLVLWQPSYPASI-YTHYKVSID-PPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIST-- 268 (361)
Q Consensus 195 --~~~~~~v~W~~~~~~~~-~~~y~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~-- 268 (361)
..+++.|+|+++...+. ..+|.|+|+ ..+...+...... ......+.+.+|.|++.|.|+|+|.+..|.+.
T Consensus 219 ~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~---~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS 295 (313)
T 2d9q_B 219 PPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL---PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWS 295 (313)
T ss_dssp --CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE---CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCC
T ss_pred cCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc---cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccC
Confidence 45789999998753444 469999999 5555554432111 12346799999999999999999999755442
Q ss_pred -c-eEEEEecCCCCC
Q psy4956 269 -P-TTAQYRTIPLRP 281 (361)
Q Consensus 269 -~-~~~~~~t~~~~p 281 (361)
. ..+.+.|.+.+|
T Consensus 296 ~wS~~~~~~T~~~~P 310 (313)
T 2d9q_B 296 DWSPSLELRTTERAA 310 (313)
T ss_dssp CCCCCEEECCCC---
T ss_pred CCCCccceeCCccCC
Confidence 2 234566666655
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=154.25 Aligned_cols=175 Identities=15% Similarity=0.191 Sum_probs=127.9
Q ss_pred eCCCceEEEEecCCCCCC-CcceEEEEEEcCCCCC------CCCeEE---eecCccceEEecCCCCCceEEEEEEEecCC
Q psy4956 6 HGVHGANLVIKIPENLSS-DNSTYRLDYIPAHGHP------PPNTTY---VSRDIKDNIEFSEGLPGTKYDFYLYYTNST 75 (361)
Q Consensus 6 ~~~~~~~l~~~~p~~~~~-~~~~Y~v~~~~~~~~~------~~~~~~---~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~ 75 (361)
...+...|.|+.|...++ ++.+|+|.|+...... ...... ......++++|.+|.|++.|.|+|+|.|+.
T Consensus 344 vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~ 423 (536)
T 3fl7_A 344 GMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGV 423 (536)
T ss_dssp CCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTT
T ss_pred ecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecC
Confidence 345677788888887766 8999999998732110 001111 111237899999999999999999999987
Q ss_pred cC---ccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEc
Q psy4956 76 VH---DWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150 (361)
Q Consensus 76 ~~---~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~ 150 (361)
|. ......+.+.|.+.+|..+.+...+.+++.|+|++|. ++.+.+|+|.|+..+.. .....+....+ ++.|.
T Consensus 424 G~~sps~~s~~v~v~T~~~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~--~~~~~v~~~~t-s~~l~ 500 (536)
T 3fl7_A 424 SGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDS--NSYNVRRTEGF-SVTLD 500 (536)
T ss_dssp GGGCSCCCEEEEEEECCSCCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--C--CCCEEEEESSS-EEECC
T ss_pred CCCCCCCccceeEEeecccCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCC--ceEEEEcCCCC-EEEEC
Confidence 54 2344577888889999988887888999999999986 56789999999986543 22233445555 99999
Q ss_pred CCCCCcEEEEEEEEEeCCCCcccceeeeeccCC
Q psy4956 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 151 ~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p 183 (361)
+|.|++.|.|+|+|.+..|.+..+....++|.+
T Consensus 501 gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 501 DLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp SCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred CCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 999999999999999999988766666677654
|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=174.40 Aligned_cols=252 Identities=15% Similarity=0.151 Sum_probs=128.7
Q ss_pred CCCccEEEEEeCCEEEEEeeCCC--C-CCcccEEEEEEECC--------------CCCCCeEE-eec--------CCCCc
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPI--S-GKYSGFKLKVISLS--------------EKTPPRII-GFT--------ENPPA 145 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~--~-~~~~~y~v~~~~~~--------------~~~~~~~~-~~~--------~~~~~ 145 (361)
.|.++.+...+++++.|+|++|. + +.+.+|.|+|+... ...|.... ... ....
T Consensus 471 ~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~- 549 (897)
T 2dtg_E 471 ELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP- 549 (897)
T ss_dssp CBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC-
T ss_pred ceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccccc-
Confidence 36788999999999999999976 2 36889999887641 11222110 000 0134
Q ss_pred eEEEcCCCCCcEEEEEEEE-EeCCCC----cccceeeeecc---CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEE
Q psy4956 146 GYSLKDLTPGGSYQVQLFS-VYDSKE----SVAYTSRNFTT---KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYK 216 (361)
Q Consensus 146 ~~~l~~L~p~~~Y~v~v~a-~~~~~~----s~~~~~~~~~t---~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~ 216 (361)
.+.|.+|.|++.|.|+|+| .+..|. +..+....++| .|.+|.++.+...+.+++.|+|++|.. .|.+.+|.
T Consensus 550 ~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~ 629 (897)
T 2dtg_E 550 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYL 629 (897)
T ss_dssp EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEE
T ss_pred ceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeEEE
Confidence 8999999999999999999 776665 34444444555 378899999999999999999998743 37899999
Q ss_pred EEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEE----EEecCCCCCccceEEeeecC
Q psy4956 217 VSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTA----QYRTIPLRPLSFTYDKASIT 292 (361)
Q Consensus 217 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~----~~~t~~~~p~~l~~~~~~~~ 292 (361)
|.|+......... . .......+|.|++.|.++|.|.+..+.+..... .....|..|..+. ....
T Consensus 630 V~~~~~~~~~~~~----~-----~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~---~~~~ 697 (897)
T 2dtg_E 630 VFWERQAEDSELF----E-----LDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL---KELE 697 (897)
T ss_dssp CCEEEECCCCSCT----T-----CSSSCSCCCCCC---------------------------------------------
T ss_pred EEEEECCCCccce----e-----cccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchh---hhhh
Confidence 9998654422110 1 122233558999999999999987654432211 1112334444443 3667
Q ss_pred CceEEEEeeCCCCCCCceeE---EEEEEEC--CC---CCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 293 SNSLRVVWEPPKGFSEFDKY---QVSINVR--RP---GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 293 ~~si~l~W~~~~~~~~~~~y---~i~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
..++.++|+++... .+..+ ...+... .. .+..... ......+++++.+ |+|++.|.|+|+|.++
T Consensus 698 ~~s~~~~W~~~~~n-~v~~~~p~~~r~~l~~~~n~t~~~~~~~~-~~~~~~t~~~i~g-L~p~t~Y~~~V~A~n~ 769 (897)
T 2dtg_E 698 ESSFRKTFEDYLHN-VVFVPRPSRKRRSLGDVGNAGNNEEHRPF-EKVVNKESLVISG-LRHFTGYRIELQACNQ 769 (897)
T ss_dssp ---------------------------------------CCSCS-CEECSCSEEEECS-SCSSCEEEECCEEESC
T ss_pred hhheeeeEEEccCc-eEEccCCCcccccccccccccCccccceE-EecCCceEEEECC-CCCCcEEEEEEEEEeC
Confidence 78999999976431 11111 0001000 00 0001111 1223457899986 9999999999999986
|
| >3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.1e-18 Score=145.83 Aligned_cols=241 Identities=10% Similarity=0.026 Sum_probs=129.5
Q ss_pred CceEEEEecCCC---CCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEec------CCcCcc
Q psy4956 9 HGANLVIKIPEN---LSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTN------STVHDW 79 (361)
Q Consensus 9 ~~~~l~~~~p~~---~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~------~~~~~~ 79 (361)
+...|.|+.|.. .++.+..|+|+|+...... ...+...+ . ....++..+..|.|+|+|.+ +.|..+
T Consensus 47 ~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~--w~~~~~~~-~--~~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S 121 (380)
T 3lb6_C 47 GYLYLQWQPPLSLDHFKECTVEYELKYRNIGSET--WKTIITKN-L--HYKDGFDLNKGIEAXIHTLLPWQCTNGSEVQS 121 (380)
T ss_dssp SEEEEEEECCCC------CCCEEEEEEEETTCSS--CEEEEESS-S--EEEEECCTTSCEEEEEEEECCHHHHSSSCCBC
T ss_pred ceEEEEECCCCCccccccceEEEEEEECCCCCCc--ceEEEecc-E--EEEEeecCCCceEEEEEeecCCcccCCccCcc
Confidence 557788888775 2357999999999854322 23333332 2 23345566999999999983 332323
Q ss_pred ceeeEEE-e----cCCCCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEEECCCCCCCeEE--eec-CCCCceEEEc
Q psy4956 80 LTWTASI-T----TPPDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEKTPPRII--GFT-ENPPAGYSLK 150 (361)
Q Consensus 80 ~~~~~~~-~----t~~~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~~~~~~~~~~~~--~~~-~~~~~~~~l~ 150 (361)
....... . .++.+|.++.......+.+.++|+++.. +...+|.|.|+..+......+. ... .... .+.+.
T Consensus 122 ~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~~~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~-~C~~~ 200 (380)
T 3lb6_C 122 SWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGVLLDTNYNLFYWYEGLDHALQCVDYIKADGQNI-GCRFP 200 (380)
T ss_dssp CCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC------CCEEEEEECTTCSSCEECSEEEEC--CEE-EEECC
T ss_pred ccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCCCCCCCccEEEEEEECCCCccccCCCccccCCceE-EEEeC
Confidence 3222222 1 1355688999888888999999998763 3467899999875432222221 111 1222 56665
Q ss_pred --CCCCCcEEEEEEEEEeCCCCcccc-eeeeec--cCCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCC
Q psy4956 151 --DLTPGGSYQVQLFSVYDSKESVAY-TSRNFT--TKPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPD 223 (361)
Q Consensus 151 --~L~p~~~Y~v~v~a~~~~~~s~~~-~~~~~~--t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~ 223 (361)
++.+++.|.|+|.+.+..|..... ...... ..|.||.++.+...+.+++.|+|++|... +.+.+|.|.|+..+
T Consensus 201 ~~~~~~~~~Y~i~V~a~n~~G~~~s~~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~ 280 (380)
T 3lb6_C 201 YLEASDYKDFYICVNGSSENKPIRSSYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDD 280 (380)
T ss_dssp CCTTCSSSCEEEEEEEC-----CCCEEEEECGGGSCCCCCCEEEEEC-------CEEEECCSSSCCSTTEEEEECC----
T ss_pred CCcccceeEEEEEEEEEcCCeeeccccEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeCC
Confidence 568889999999998866654321 112211 24888999999877778999999887432 45679999998753
Q ss_pred CCCceeEEeeccCCCCCcEEEecC-CCCCCeEEEEEEEEeC
Q psy4956 224 APESVLYVEKEGEPPGPAQAAFKG-LVPGRAYNISVQTVSE 263 (361)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~-L~p~t~Y~v~V~a~~~ 263 (361)
. .+.. .... ..+.+.+ |.|++.|.|+|+|...
T Consensus 281 ~-~w~~-~~~~------~~~~l~~~L~p~t~Y~~qVRa~~~ 313 (380)
T 3lb6_C 281 T-TLVT-ATVE------NETYTLKTTNETRQLCFVVRSKVN 313 (380)
T ss_dssp -----C-CEES------SSCC------------CCEEEEEC
T ss_pred C-CceE-eccc------ceEEEeCccCCCcEEEEEEEEEEc
Confidence 2 2211 1111 2466788 9999999999999953
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=133.52 Aligned_cols=171 Identities=19% Similarity=0.268 Sum_probs=119.5
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEe--cCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF--KGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~L~p~t~Y~v~V 258 (361)
..|.+|.+|.+...+..++.++|+++...+....|.|.|+..+........... ......+.| .+|.+.+.|.|+|
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~~~~~c~~~~--~~~~~~c~~~~~~l~~~~~Y~~~V 79 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYI--TGGPNSCHFGKQYTSMWRTYIMMV 79 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSCCCSEEEEEEEETTCCCCEECSCSS--TTCTTEEEECGGGCCSSSCEEEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCCCCceEEEEEEECCCCccccCCCCC--CCCCeEEEeCCCCcccceeEEEEE
Confidence 347889999999889999999999875444457999999875433322211101 112344544 5799999999999
Q ss_pred EEEeCCCCCCceEEEEe----cCCCCCccceEEeeec----CCceEEEEeeCCCCCC-----CceeEEEEEEECCCCCCC
Q psy4956 259 QTVSEDEISTPTTAQYR----TIPLRPLSFTYDKASI----TSNSLRVVWEPPKGFS-----EFDKYQVSINVRRPGASS 325 (361)
Q Consensus 259 ~a~~~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~----~~~si~l~W~~~~~~~-----~~~~y~i~~~~~~~~~~~ 325 (361)
.|.|+.|.+.+....+. ..|.+|.++.+ ... ..+++.|+|++|.... .+.+|+|+|+..+...+
T Consensus 80 ~A~N~~G~~~s~~~~~~~~~~v~p~pP~~l~~--~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~- 156 (210)
T 3n06_B 80 NATNQMGSSFSDELYVDVTYIVQPDPPLELAV--EVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEW- 156 (210)
T ss_dssp EEEETTEEEECCCEEECGGGCBCCCCCEEEEE--EEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSC-
T ss_pred EEEcCCCCeeCCcEEEchhheEecCCCceEEE--EEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCC-
Confidence 99998776533322232 35788999988 433 3579999999975321 25899999998754322
Q ss_pred CceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 326 TPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
... .....+++.+.+ |+|++.|.|+|+|.++
T Consensus 157 -~~~-~~~~~~~~~l~~-L~p~t~Y~v~Vra~~~ 187 (210)
T 3n06_B 157 -EIH-FAGQQTEFKILS-LHPGQKYLVQVRCKPD 187 (210)
T ss_dssp -EEE-EEETCSEEEECC-CCTTCEEEEEEEEEES
T ss_pred -EEE-eccCceEEEEec-cCCCCEEEEEEEEecC
Confidence 212 223456899986 9999999999999975
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-16 Score=140.41 Aligned_cols=327 Identities=14% Similarity=0.140 Sum_probs=194.3
Q ss_pred EEEecCCCC-CCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEE-----
Q psy4956 13 LVIKIPENL-SSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI----- 86 (361)
Q Consensus 13 l~~~~p~~~-~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~----- 86 (361)
+...|.... -+....|++.+...+ ...... ..+.+.|..|.|+. +.|.+....+. .....+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~ 86 (488)
T 2q7n_A 20 WDCTWPAPLGVSPGTVKDICIKDRF------HSCHPL-ETTNVKIPALSPGD-HEVTINYLNGF-----QSKFTLNEKDV 86 (488)
T ss_dssp EEEECCCCSSSCCSCEEEEEEESSS------EEEEEC-SSSEEEEECCCSSC-EEEEEEESSSC-----EEEEEECSTTC
T ss_pred EEEeeeCcCccCCCceEEEEEecCC------ceeEEe-ccceeEcccCCCCc-ceEEEeeccCc-----eeEEEEecCcc
Confidence 344454432 346777888876522 222222 26789999999999 57777643332 111222
Q ss_pred ecCCCCCCccEEEEE-eCCEEEEEeeCCCCC-C---cccEEEEEEECCCC--CCCeEEee--cCC-CCceEEEcCCC--C
Q psy4956 87 TTPPDPPTNLSVNVR-SGKTAQIFWSPPISG-K---YSGFKLKVISLSEK--TPPRIIGF--TEN-PPAGYSLKDLT--P 154 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~-~~~~v~l~W~~p~~~-~---~~~y~v~~~~~~~~--~~~~~~~~--~~~-~~~~~~l~~L~--p 154 (361)
...|.+|.+|.+... ....+.|+|..+... + ...|.|++...... .+...... ... ....-....+. .
T Consensus 87 ~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~w~s~~pl~ 166 (488)
T 2q7n_A 87 SLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVLLNTMLSGKDTVQHWNWTSDLPLQ 166 (488)
T ss_dssp EECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCCEECCEECSSSCBCCEEEEECSSCCS
T ss_pred ccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEEEEEEEEecCCCceeEeeccCCCccc
Confidence 123888999987776 368999999775421 1 13477765333221 12221111 111 00022333332 3
Q ss_pred CcEEEEEEEEEeCCC-------Ccccceeeee------------------------------------------------
Q psy4956 155 GGSYQVQLFSVYDSK-------ESVAYTSRNF------------------------------------------------ 179 (361)
Q Consensus 155 ~~~Y~v~v~a~~~~~-------~s~~~~~~~~------------------------------------------------ 179 (361)
++.|.|+||+..++. +|.++....+
T Consensus 167 c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~t~i~v~P~~~~v~~Gs~vtl~C~a~~~~I~W~~ng~~i~~~ri 246 (488)
T 2q7n_A 167 CATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVLAGSNMTICCMSPTKVLSGQIGNTLRPLIHL 246 (488)
T ss_dssp SSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCCCCSSCCEECTTCEEESSCCCEEEECCSSCEEEEEETTEECCCEEC
T ss_pred ccceEEEEEEEeccccccCCCCCcCCCChhhcCCcCCCceEECCCCCEEcCCCCEEEEEECCCCEEEEEECCEECchhhc
Confidence 779999999996221 1211110000
Q ss_pred -------------------------------------ccCCCCCcceEEEeccCCeEEEEeecCCCCC----cceEEEEE
Q psy4956 180 -------------------------------------TTKPNTPGKFIVWFRNETTLLVLWQPSYPAS----IYTHYKVS 218 (361)
Q Consensus 180 -------------------------------------~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~----~~~~y~v~ 218 (361)
...|.+|.++.+...+..++.++|.++...+ ....|.|.
T Consensus 247 ~~~~~~L~I~nl~~sd~g~y~~~C~~~~~i~~~~l~v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~ 326 (488)
T 2q7n_A 247 YGQTVAIHILNIPVSENSGTNIIFITDDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLF 326 (488)
T ss_dssp SSSCEEEECCSCCCCCSSCEEEEEEESSCEEEEEEEEECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEE
T ss_pred cceEEEEEEeCCCcccCCcEEEEEEcCCeEEEEEEEeeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEE
Confidence 0125667788888778889999999875431 36799999
Q ss_pred EeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEe----cCCCCCccceEEeeecCCc
Q psy4956 219 IDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYR----TIPLRPLSFTYDKASITSN 294 (361)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~~~~ 294 (361)
|...+... .........+....+.+..+..++.|.|+|.|.|..|.+. ....+. ..|.||.+|++ .....+
T Consensus 327 y~~~g~~~--~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S~~~~~~~~~v~P~PP~nl~v--~~~s~~ 401 (488)
T 2q7n_A 327 ESISGKSA--VFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-SAVVINVTERVAPHDPTSLKV--KDINST 401 (488)
T ss_dssp ETTTCCEE--EEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-EEEECCGGGTBCCCCCEEEEE--EECSTT
T ss_pred EEECCCCC--CCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-ceEEEEecCCCCCCCCeEEEE--EecCCC
Confidence 97653211 1111111013345677765555699999999999877633 233332 25788999999 778889
Q ss_pred eEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeecCCCCcee--EeccCCCCCceEEEEEEEEe
Q psy4956 295 SLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSRDEPTQC--DMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 295 si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~p~t~Y~v~V~a~~ 358 (361)
++.|+|++|.. .+.+..|+|+|+..+...+.............+ .+.+ |+|++.|.|+|+|.+
T Consensus 402 sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~-L~P~T~Y~~rVRA~~ 467 (488)
T 2q7n_A 402 VVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDK-LNPYTAYTFRVRCSS 467 (488)
T ss_dssp CEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECS-CCSSCCBBCCEEEEE
T ss_pred EEEEEEeCCCCCCCcceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCC-CCCCceEEEEEEEEE
Confidence 99999998732 236789999999775421111111111123355 8886 999999999999997
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-16 Score=127.45 Aligned_cols=182 Identities=15% Similarity=0.258 Sum_probs=127.2
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCCC-CcccEEEEEEECCCCCCCeEEeec-CCCCceEEE--cCCCCCcEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISG-KYSGFKLKVISLSEKTPPRIIGFT-ENPPAGYSL--KDLTPGGSYQVQLF 163 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~~-~~~~y~v~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~L~p~~~Y~v~v~ 163 (361)
.+|.+|.++........++.++|+++.+. ....|.|.|+......+..+.... .... .+.+ .+|.+++.|.|+|.
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~~~~~c~~~~~~~~~-~c~~~~~~l~~~~~Y~~~V~ 80 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHECPDYITGGPN-SCHFGKQYTSMWRTYIMMVN 80 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSCCCSEEEEEEEETTCCCCEECSCSSTTCTT-EEEECGGGCCSSSCEEEEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCCCCceEEEEEEECCCCccccCCCCCCCCCe-EEEeCCCCcccceeEEEEEE
Confidence 46788999998888889999999997632 357899999876433333322111 1233 5665 56999999999999
Q ss_pred EEeCCCCcccceeeeec----cCCCCCcceEEEecc----CCeEEEEeecCCCCC-----cceEEEEEEeCCCCCCceeE
Q psy4956 164 SVYDSKESVAYTSRNFT----TKPNTPGKFIVWFRN----ETTLLVLWQPSYPAS-----IYTHYKVSIDPPDAPESVLY 230 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~----~~~~~v~W~~~~~~~-----~~~~y~v~~~~~~~~~~~~~ 230 (361)
|.+..|.+.. ....+. ..|.+|.++.+.... .+++.|+|+++.... ...+|.|.|+..+...+...
T Consensus 81 A~N~~G~~~s-~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~ 159 (210)
T 3n06_B 81 ATNQMGSSFS-DELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH 159 (210)
T ss_dssp EEETTEEEEC-CCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE
T ss_pred EEcCCCCeeC-CcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE
Confidence 9998776532 112222 347889999887653 579999998874332 25799999998765444432
Q ss_pred EeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCC-CCceE-EEEec
Q psy4956 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI-STPTT-AQYRT 276 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~-s~~~~-~~~~t 276 (361)
... ..+.+.+.+|.|++.|.|+|+|.+..|. |..+. +.+.|
T Consensus 160 ~~~-----~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~T 202 (210)
T 3n06_B 160 FAG-----QQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQI 202 (210)
T ss_dssp EEE-----TCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred ecc-----CceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEEC
Confidence 221 2478999999999999999999997664 43332 34444
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-17 Score=131.82 Aligned_cols=174 Identities=13% Similarity=0.123 Sum_probs=117.6
Q ss_pred CCCCCcceEEEec-cCCeEEEEeecCCCCCcceEEEEEEeCCCCC----CceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 182 KPNTPGKFIVWFR-NETTLLVLWQPSYPASIYTHYKVSIDPPDAP----ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 182 ~p~~p~~l~~~~~-~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.|.+|.+|.+... ..+++.+.|+++...+....|.|.|+..... .................+.+.+|.+++.|.|
T Consensus 4 pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~~ 83 (215)
T 1cd9_B 4 PPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAI 83 (215)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEE
T ss_pred CCCCCeeeeeecCCCcccEEEEecCCCCCCCceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEEEE
Confidence 4778999998876 6789999999875444456899999865321 1111111111122335677789999999999
Q ss_pred EEEEEeCCCCCCceEEEEe----cCCCCCccceEEeeec------CCceEEEEeeCCCCCCC-ceeEEEEEE-ECCCCCC
Q psy4956 257 SVQTVSEDEISTPTTAQYR----TIPLRPLSFTYDKASI------TSNSLRVVWEPPKGFSE-FDKYQVSIN-VRRPGAS 324 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~------~~~si~l~W~~~~~~~~-~~~y~i~~~-~~~~~~~ 324 (361)
+|.|.|..|.+.+....+. ..|.+|.++.+ ... ..+++.|+|++|...+. +.+|+|+|+ ..+...+
T Consensus 84 ~V~A~N~~G~~~s~~~~~~~~~~v~p~pP~~~~~--~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w 161 (215)
T 1cd9_B 84 WVQAENMLGSSESPKLCLDPMDVVKLEPPMLQAL--DIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANW 161 (215)
T ss_dssp EEEEEETTEEEECCCEEECGGGGBCCCCCEEEEC--CC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCC
T ss_pred EEEEECCCCCccCccEEEchHHceEeCCCcEEEE--EEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCc
Confidence 9999998775432222232 35788998888 554 57889999999743223 379999999 5443222
Q ss_pred CCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 325 STPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
..+.......+.+.+.+ |+|++.|.|+|+|.+.
T Consensus 162 -~~~~~~~~~~~~~~l~~-L~p~t~Y~~~Vra~~~ 194 (215)
T 1cd9_B 162 -TLVFHLPSSKDQFELCG-LHQAPVYTLQMRCIRS 194 (215)
T ss_dssp -EEEEEEESCEEEEEECC-CCSCSCEEEEEEEEES
T ss_pred -EEEecccCcceEEEEcC-CCCCCEEEEEEEeeEC
Confidence 11112234457899986 9999999999999974
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-16 Score=135.10 Aligned_cols=207 Identities=14% Similarity=0.132 Sum_probs=130.4
Q ss_pred eEEEcCCCCCcEEEEEEEEEeCCCCcccc--eeeeeccCCCCCcceEEEecc-CCeEEEEeecCCCCCcceEEEEEEeCC
Q psy4956 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAY--TSRNFTTKPNTPGKFIVWFRN-ETTLLVLWQPSYPASIYTHYKVSIDPP 222 (361)
Q Consensus 146 ~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~--~~~~~~t~p~~p~~l~~~~~~-~~~~~v~W~~~~~~~~~~~y~v~~~~~ 222 (361)
.+.|.++.......+...+.+ +..... ........|.+|.++.+.... .+++.+.|+++...+....|.|.++..
T Consensus 62 ~L~i~~~~~~d~g~y~c~~~~--~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~ 139 (313)
T 2d9q_B 62 IITLPHLNHTQAFLSCSLNWG--NSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKS 139 (313)
T ss_dssp EEEESCCCSSEEEEEEEEESS--SSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEEC
T ss_pred EEEEeccCCCccceEEeeecC--CCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEec
Confidence 678888877644333444422 222111 122223457889999988774 689999999875444456799998765
Q ss_pred CCC-C--ceeEEeeccCCCCCcEEEe--cCCCCCCeEEEEEEEEeCCCCCCceEEEEe----cCCCCCccceEEeeec--
Q psy4956 223 DAP-E--SVLYVEKEGEPPGPAQAAF--KGLVPGRAYNISVQTVSEDEISTPTTAQYR----TIPLRPLSFTYDKASI-- 291 (361)
Q Consensus 223 ~~~-~--~~~~~~~~~~~~~~~~~~~--~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~-- 291 (361)
... . ......-.. ......+.| .+|.+++.|.|+|.|.|..|.+.+....+. ..|.+|.++.+ ...
T Consensus 140 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~--~~~~~ 216 (313)
T 2d9q_B 140 RGNCQTQGDSILDCVP-KDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTM--DPSPE 216 (313)
T ss_dssp CTTSCSCCCCEEEECC-CTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEC--CC---
T ss_pred CCCcccCCcccccCCC-CCCCcEEEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEE--EEecc
Confidence 321 1 001111000 122345555 569999999999999998776432222222 24788988888 544
Q ss_pred ----CCceEEEEeeCCCCCCC-ceeEEEEEE-ECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 292 ----TSNSLRVVWEPPKGFSE-FDKYQVSIN-VRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 292 ----~~~si~l~W~~~~~~~~-~~~y~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
..+++.|+|++|...+. ..+|+|+|+ ..+...+ ..........+.+.+.+ |+|++.|.|+|+|.+.
T Consensus 217 ~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w-~~~~~~~~~~~~~~l~~-L~p~t~Y~~rVra~~~ 288 (313)
T 2d9q_B 217 AAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASW-ALVGPLPLEALQYELCG-LLPATAYTLQIRCIRW 288 (313)
T ss_dssp ----CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCC-EEEEEECSCEEEEEECS-CCSCCCEEEEEEEEEC
T ss_pred cccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCc-EEcccccCcceEEEEeC-CCCCCeEEEEEEeeEC
Confidence 46899999999743223 479999999 4433222 21112234456899986 9999999999999974
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-16 Score=126.75 Aligned_cols=175 Identities=15% Similarity=0.174 Sum_probs=120.4
Q ss_pred cCCCCCCccEEEEE-eCCEEEEEeeCCCCC-CcccEEEEEEECCCCC---CCeEEeec--CCCC-ceEEEcCCCCCcEEE
Q psy4956 88 TPPDPPTNLSVNVR-SGKTAQIFWSPPISG-KYSGFKLKVISLSEKT---PPRIIGFT--ENPP-AGYSLKDLTPGGSYQ 159 (361)
Q Consensus 88 t~~~~p~~l~~~~~-~~~~v~l~W~~p~~~-~~~~y~v~~~~~~~~~---~~~~~~~~--~~~~-~~~~l~~L~p~~~Y~ 159 (361)
.+|.+|.++..... ..+++.++|+++.++ ...+|.|.|+...... ......+. .... +.+.+.+|.+++.|.
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~ 82 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMA 82 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEE
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCCCCceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEEE
Confidence 35788999988776 578999999987643 3467999998753221 11122222 1122 356667999999999
Q ss_pred EEEEEEeCCCCcccceeeeec----cCCCCCcceEEEec------cCCeEEEEeecCCCCCcc-eEEEEEEe-CCCCCCc
Q psy4956 160 VQLFSVYDSKESVAYTSRNFT----TKPNTPGKFIVWFR------NETTLLVLWQPSYPASIY-THYKVSID-PPDAPES 227 (361)
Q Consensus 160 v~v~a~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~------~~~~~~v~W~~~~~~~~~-~~y~v~~~-~~~~~~~ 227 (361)
|+|.|.+..|.+.. ....+. ..|.+|.++.+... ..+++.|+|+++...+.+ .+|.|.|+ ..+...+
T Consensus 83 ~~V~A~N~~G~~~s-~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w 161 (215)
T 1cd9_B 83 IWVQAENMLGSSES-PKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANW 161 (215)
T ss_dssp EEEEEEETTEEEEC-CCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCC
T ss_pred EEEEEECCCCCccC-ccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCc
Confidence 99999998776432 112222 34888999988765 577899999987544544 69999999 6555554
Q ss_pred eeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCC
Q psy4956 228 VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~ 266 (361)
...... ......+.+.+|.|++.|.|+|+|.+..|.
T Consensus 162 ~~~~~~---~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~ 197 (215)
T 1cd9_B 162 TLVFHL---PSSKDQFELCGLHQAPVYTLQMRCIRSSLP 197 (215)
T ss_dssp EEEEEE---ESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred EEEecc---cCcceEEEEcCCCCCCEEEEEEEeeECCCC
Confidence 432111 112478999999999999999999997543
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.7e-16 Score=136.41 Aligned_cols=244 Identities=10% Similarity=0.066 Sum_probs=144.8
Q ss_pred CceEEEEecCCCCC------CCcceEEEEEEcCCCCCCCCeEEeecCccceEEec--CCCCCceEEEEEEEecCC-----
Q psy4956 9 HGANLVIKIPENLS------SDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFS--EGLPGTKYDFYLYYTNST----- 75 (361)
Q Consensus 9 ~~~~l~~~~p~~~~------~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~--~L~p~t~Y~i~V~a~~~~----- 75 (361)
....|.|+.|.... .....|+|+|+... ..+..... .......+.+. +|.|++.|.|+|+|.+..
T Consensus 122 ~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~-~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~ 199 (419)
T 2gys_A 122 DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAI-LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLS 199 (419)
T ss_dssp TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEE-EEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCC
T ss_pred CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheee-ecccceEEEechhhcCCCCeEEEEEEEecCCCCCCC
Confidence 35667777776532 24678999999865 33222222 11124566666 999999999999998742
Q ss_pred cCccc-eeeEEEecC---CCCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEEECCCC-----C-CCeEE--eecCC
Q psy4956 76 VHDWL-TWTASITTP---PDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEK-----T-PPRII--GFTEN 142 (361)
Q Consensus 76 ~~~~~-~~~~~~~t~---~~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~~~~~~-----~-~~~~~--~~~~~ 142 (361)
|.-|. +..+.+.+. +.+|.++.....+.+.+.+.|+++.. ..-.+|.|.|+..... . ...+. .....
T Consensus 200 G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~~~~~l~c~W~~~~~~~~~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~ 279 (419)
T 2gys_A 200 GRPSKWSPEVCWDSQPGDEAQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREGL 279 (419)
T ss_dssp BCCCCCCCCEEEECCCCCTTSCEEEEEEECSSSEEEEEEEEEHHHHTTCCEEEEEECC-----CCCCCCEECCCEEEECC
T ss_pred cccCCCCCceeeeccccccCCCceEEEEECCceEEEeEEECCCCCCCceeEEEEEEecCccccccCcccccCCCcccccC
Confidence 12121 123444443 45677888887778899999998531 0124599998764321 1 11111 11100
Q ss_pred C-----C-ceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCC--CcceE
Q psy4956 143 P-----P-AGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTH 214 (361)
Q Consensus 143 ~-----~-~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~ 214 (361)
. . +.+.+.+|.+.+.|.|+|.+.++.+...+ .....|.|| .+.+.. ..+.+.|.|++|... ..+.+
T Consensus 280 ~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~~~~~----~~~v~p~PP-~l~v~~-~~~~l~l~W~~P~~~~~~~~l~ 353 (419)
T 2gys_A 280 GSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEKHIKS----SVNIQMAPP-SLQVTK-DGDSYSLRWETMKMRYEHIDHT 353 (419)
T ss_dssp TTTEEEEEEEEECSCTTTCCEEEEEEEECCCCEEEEG----GGSBCCCCC-EEEEC----CCCEEEEEC--------CEE
T ss_pred CCcceeEEeEEECccCCccCEEEEEEEEccCCccccc----eEEEEECCC-CeEEEE-eCCeEEEEECCCcccccccceE
Confidence 0 1 24566789999999999988654331111 111236566 466554 367899999987321 24679
Q ss_pred EEEEEeCCCCC-CceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCC
Q psy4956 215 YKVSIDPPDAP-ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264 (361)
Q Consensus 215 y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 264 (361)
|.|.|+..+.. ......... ..+.+.|.+|.|++.|.|+|+|.+..
T Consensus 354 Yev~y~~~~~~w~~~~~~~~~----~~~~~~l~~L~p~t~Y~~qVRa~~~~ 400 (419)
T 2gys_A 354 FEIQYRKDTATWKDSKTETLQ----NAHSMALPALEPSTRYWARVRVRTSR 400 (419)
T ss_dssp EEEEEECSSSCSTTSCEEEEE----SCSEEECCCCCSSCCCEEEEEEEECC
T ss_pred EEEEEEcCCCCcceeeccccc----cccEEEeccCCCCCeEEEEEEEEEcC
Confidence 99999887543 111111110 24789999999999999999999865
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.5e-14 Score=124.59 Aligned_cols=205 Identities=15% Similarity=0.192 Sum_probs=135.4
Q ss_pred ecCCCCceEEEcCCCC----CcEEEEEEEEEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCc---
Q psy4956 139 FTENPPAGYSLKDLTP----GGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASI--- 211 (361)
Q Consensus 139 ~~~~~~~~~~l~~L~p----~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~--- 211 (361)
+..... .++|.+|.. ++.|.+. ..+. ...........|.+|.++.......+++.++|+++...+.
T Consensus 241 l~~~~~-~i~v~nl~~~~~sg~n~~C~----~~~~--~~g~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~ 313 (483)
T 3e0g_A 241 LDGENV-AIKIRNISVSASSGTNVVFT----TEDN--IFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGP 313 (483)
T ss_dssp CSSSCE-EEEECSCCCCCSSCEEEEEE----ESSC--EEEEEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGG
T ss_pred ecCCEE-EEEEeCCCCccCccceEEEe----cCCc--ccceEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCC
Confidence 333344 777777765 3445443 2221 1112233345578899999998888899999998754332
Q ss_pred -ceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEEEe----cCCCCCccceE
Q psy4956 212 -YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQYR----TIPLRPLSFTY 286 (361)
Q Consensus 212 -~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~----t~~~~p~~l~~ 286 (361)
...|.|.|+..+.. ..........+....+.|.+|.+.+.|.|+|.|.|+.|.+... ..+. ..|.||.++.+
T Consensus 314 ~~t~YtL~y~~~g~~--~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~-~~~~~~~~VkP~PP~nl~v 390 (483)
T 3e0g_A 314 RATSYTLVESFSGKY--VRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQST-ILVNITEKVYPHTPTSFKV 390 (483)
T ss_dssp GCCEEEEEETTTCCE--EEECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEEEE-EEECGGGGBCCCCCEEEEE
T ss_pred CCeeEEEEEEECCCC--ccccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcccc-eEEEeccccCCCCCeeeEE
Confidence 67999999864221 1111111102235678999999999999999999988765433 3332 35788999999
Q ss_pred EeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeecC---CCCceeEeccCCCCCceEEEEEEEE
Q psy4956 287 DKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSR---DEPTQCDMSEGLEPGRTYQVLVKTV 357 (361)
Q Consensus 287 ~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~v~V~a~ 357 (361)
.....+++.|+|++|.. ......|+|+|+..+..... ...... ....++.+.+ |+||+.|.|+|+|.
T Consensus 391 --~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~-~~vsv~~~~~~~~s~~l~~-L~PgT~Y~vrVRA~ 461 (483)
T 3e0g_A 391 --KDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQ-RNVTIQGVENSSYLVALDK-LNPYTLYTFRIRCS 461 (483)
T ss_dssp --CCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCE-EECCCBCCSSSBCCCCCCS-CCSSSSCEEEEECC
T ss_pred --EEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCce-EEEEEeccCCceeEEEEec-cCCCcEEEEEEEEe
Confidence 67778899999999742 23567999999987643211 111121 1223678886 99999999999998
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-13 Score=117.37 Aligned_cols=228 Identities=11% Similarity=0.072 Sum_probs=146.1
Q ss_pred eEEEEEEcCCCCC-CCCeEEeecCccceEEecCCCCC--ceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEE-Ee
Q psy4956 27 TYRLDYIPAHGHP-PPNTTYVSRDIKDNIEFSEGLPG--TKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNV-RS 102 (361)
Q Consensus 27 ~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~--t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~-~~ 102 (361)
...|.|...++.. ......... ...+.|.++... ..|.+. + .|.......+.+..+|.+|. +.... ..
T Consensus 36 ~~~i~W~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~--~---~g~~~~~~~L~V~~pP~~P~-l~c~~~~~ 107 (325)
T 1n26_A 36 NATVHWVLRKPAAGSHPSRWAGM--GRRLLLRSVQLHDSGNYSCY--R---AGRPAGTVHLLVDVPPEEPQ-LSCFRKSP 107 (325)
T ss_dssp CSEEEEEEECSSSSCCCEEEEEE--SSEEEECSCCGGGCEEEEEE--S---SSSCSCEEEEEECCCCCCCC-CEEEBSST
T ss_pred CceEEEEECCccCCccccccccc--cceEEecccchhhCeEeEEE--e---CCEEeeeEEEEeccCCCCCc-eeEEeecC
Confidence 3567777644321 111222222 367888888754 367776 2 22334445566666778786 65542 23
Q ss_pred CCEEEEEeeCCCC-CCcccEEEEEEECCCCCC-C---eEEee-cCCCCceEEEcCCC-CCcEEEEEEEEEeCCCCccc-c
Q psy4956 103 GKTAQIFWSPPIS-GKYSGFKLKVISLSEKTP-P---RIIGF-TENPPAGYSLKDLT-PGGSYQVQLFSVYDSKESVA-Y 174 (361)
Q Consensus 103 ~~~v~l~W~~p~~-~~~~~y~v~~~~~~~~~~-~---~~~~~-~~~~~~~~~l~~L~-p~~~Y~v~v~a~~~~~~s~~-~ 174 (361)
...+.++|+++.+ +...+|.|.|+...+... . .+... ..... ++.+..+. +++.|.|+|.|.+..|.+.. .
T Consensus 108 ~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~-~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~ 186 (325)
T 1n26_A 108 LSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKF-SCQLAVPEGDSSFYIVSMCVASSVGSKFSKT 186 (325)
T ss_dssp TSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEEEEEEEEETTTTEE-EEEECCCTTCCCEEEEEEEEEETTEEEECCC
T ss_pred CCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcccccCCCCCCCCCE-EEEECCCcccCcEEEEEEEEEcCCCCcccCc
Confidence 5689999998653 345689998876422111 1 11111 22233 78888876 88999999999998876532 1
Q ss_pred eeee--eccCCCCCcceEEEeccC--CeEEEEeecCCC---CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecC
Q psy4956 175 TSRN--FTTKPNTPGKFIVWFRNE--TTLLVLWQPSYP---ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG 247 (361)
Q Consensus 175 ~~~~--~~t~p~~p~~l~~~~~~~--~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
.... ....|.+|.++.+..... +++.|+|+++.. .+.+.+|.|.|+..+...+...... .....+.+.+
T Consensus 187 ~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~~----~~~~~~~l~~ 262 (325)
T 1n26_A 187 QTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVK----DLQHHCVIHD 262 (325)
T ss_dssp EEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEECG----GGCSEEEESS
T ss_pred EEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEccc----CCceEEEEeC
Confidence 1111 123488999999987653 589999998753 2456899999998765554432211 2247899999
Q ss_pred CCCCCeEEEEEEEEeCCCCC
Q psy4956 248 LVPGRAYNISVQTVSEDEIS 267 (361)
Q Consensus 248 L~p~t~Y~v~V~a~~~~~~s 267 (361)
|.|++.|.|+|+|.+..|.+
T Consensus 263 L~p~t~Y~~rVrA~n~~g~G 282 (325)
T 1n26_A 263 AWSGLRHVVQLRAQEEFGQG 282 (325)
T ss_dssp CCTTCCEEEEEEEEETTTBS
T ss_pred CCCCCeEEEEEEEecCCCCC
Confidence 99999999999999966544
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.8e-15 Score=130.68 Aligned_cols=223 Identities=14% Similarity=0.077 Sum_probs=145.4
Q ss_pred EEEEEcCCCCCCCCeEEeecCccceEEecCCCCC--ceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCEE
Q psy4956 29 RLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPG--TKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTA 106 (361)
Q Consensus 29 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~--t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v 106 (361)
.|.|.. +|....... ..+....++|.+|... ..|.+. +.. . .......+....+|.+|.++.........+
T Consensus 231 ~I~W~~-ng~~i~~~r--i~~~~~~L~I~nl~~sd~g~y~~~--C~~-~-~~i~~~~l~v~~pP~~P~nl~C~~~~~~sv 303 (488)
T 2q7n_A 231 VLSGQI-GNTLRPLIH--LYGQTVAIHILNIPVSENSGTNII--FIT-D-DDVYGTVVFAGYPPDVPQKLSCETHDLKEI 303 (488)
T ss_dssp EEEEEE-TTEECCCEE--CSSSCEEEECCSCCCCCSSCEEEE--EEE-S-SCEEEEEEEEECCCCCCCSCEEEBSSSSEE
T ss_pred EEEEEE-CCEECchhh--ccceEEEEEEeCCCcccCCcEEEE--EEc-C-CeEEEEEEEeeCCCCCCcccEEEEcCCCEE
Confidence 567776 332211111 2333567889999774 345553 222 2 222244555667899999998887788999
Q ss_pred EEEeeCCCCC-----CcccEEEEEEECCCCCCCeEEeec---CCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeee
Q psy4956 107 QIFWSPPISG-----KYSGFKLKVISLSEKTPPRIIGFT---ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN 178 (361)
Q Consensus 107 ~l~W~~p~~~-----~~~~y~v~~~~~~~~~~~~~~~~~---~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~ 178 (361)
.++|.++.+. ....|.|.|+..+. ...+.... .... .+.+..+..++.|.|+|.|.+..|... + ...
T Consensus 304 tcsW~pg~~~~l~G~~~t~Y~L~y~~~g~--~~~c~~~~~~~~~~~-~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S-~~~ 378 (488)
T 2q7n_A 304 ICSWNPGRITGLVGPRNTEYTLFESISGK--SAVFHRIEGLTNETY-RLGVQMHPGQEIHNFTLTGRNPLGQAQ-S-AVV 378 (488)
T ss_dssp EEEECCCSCCCCCTTSSCEEEEEETTTCC--EEEEECSSCCCSSCE-EEEEECCSSCCCCEEEEEEEETTEEEE-E-EEE
T ss_pred EEEEeCCCcCCCCCCCceeEEEEEEECCC--CCCCccccccCCceE-EEEEcCCCCccEEEEEEEEEeCCCCcc-c-eEE
Confidence 9999997643 35799999864321 11222222 1223 677765544699999999999877643 2 233
Q ss_pred ec----cCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEE--EecCCCCC
Q psy4956 179 FT----TKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA--AFKGLVPG 251 (361)
Q Consensus 179 ~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~L~p~ 251 (361)
+. ..|.+|.++.+...+.+++.|+|++|.. .+.+..|.|+|+..+...+....... ......+ .+.+|.|+
T Consensus 379 ~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~~~~~~--~~~~~~~~v~l~~L~P~ 456 (488)
T 2q7n_A 379 INVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATIR--GAEDSTYHVAVDKLNPY 456 (488)
T ss_dssp CCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEEEEEEE--CCEEEEEEEEECSCCSS
T ss_pred EEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceEEEEEe--cCCCcEEEEEeCCCCCC
Confidence 32 2488999999988888999999987642 36678999999987654332111110 0011345 89999999
Q ss_pred CeEEEEEEEEeCCCC
Q psy4956 252 RAYNISVQTVSEDEI 266 (361)
Q Consensus 252 t~Y~v~V~a~~~~~~ 266 (361)
+.|.|+|+|.+ .|.
T Consensus 457 T~Y~~rVRA~~-~g~ 470 (488)
T 2q7n_A 457 TAYTFRVRCSS-KTF 470 (488)
T ss_dssp CCBBCCEEEEE-SSC
T ss_pred ceEEEEEEEEE-CCC
Confidence 99999999999 665
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-13 Score=116.26 Aligned_cols=202 Identities=13% Similarity=0.136 Sum_probs=130.9
Q ss_pred eEEEcCCCC--CcEEEEEEEEEeCCCCcccceeeeeccCCCCCcceEEEe-ccCCeEEEEeecCCCCCcceEEEEEEeCC
Q psy4956 146 GYSLKDLTP--GGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWF-RNETTLLVLWQPSYPASIYTHYKVSIDPP 222 (361)
Q Consensus 146 ~~~l~~L~p--~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~-~~~~~~~v~W~~~~~~~~~~~y~v~~~~~ 222 (361)
.+.|.++.. ...|.+. + .|.............|.+|. |.... ....++.+.|+++...+....|.|.|+..
T Consensus 61 ~L~i~~v~~~d~G~Y~C~--~---~g~~~~~~~L~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~ 134 (325)
T 1n26_A 61 RLLLRSVQLHDSGNYSCY--R---AGRPAGTVHLLVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKF 134 (325)
T ss_dssp EEEECSCCGGGCEEEEEE--S---SSSCSCEEEEEECCCCCCCC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEE
T ss_pred eEEecccchhhCeEeEEE--e---CCEEeeeEEEEeccCCCCCc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEc
Confidence 677777653 3478776 1 33222223333445577776 77653 34668999999764444557899988754
Q ss_pred CCC-Cce--eEEeeccCCCCCcEEEecCCC-CCCeEEEEEEEEeCCCCCC--ceEEE--EecCCCCCccceEEeeecC--
Q psy4956 223 DAP-ESV--LYVEKEGEPPGPAQAAFKGLV-PGRAYNISVQTVSEDEIST--PTTAQ--YRTIPLRPLSFTYDKASIT-- 292 (361)
Q Consensus 223 ~~~-~~~--~~~~~~~~~~~~~~~~~~~L~-p~t~Y~v~V~a~~~~~~s~--~~~~~--~~t~~~~p~~l~~~~~~~~-- 292 (361)
.+. ... ..... ........+.+..+. +++.|.|+|.|.|..|.+. +..+. ....|.+|.++.+ ....
T Consensus 135 ~~~~~~~~~~~c~~-~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v--~~~~~~ 211 (325)
T 1n26_A 135 QNSPAEDFQEPCQY-SQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITV--TAVARN 211 (325)
T ss_dssp SSSSCEEEEEEEEE-ETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEE--EECTTC
T ss_pred cCCCCCcccccCCC-CCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEE--EEecCC
Confidence 221 111 11110 012334678888876 7899999999999877643 22221 1245888999998 5554
Q ss_pred CceEEEEeeCCCC---CCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 293 SNSLRVVWEPPKG---FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 293 ~~si~l~W~~~~~---~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.+++.|+|++|.. ...+.+|+|+|+..+...+ .........+++.+.+ |.|++.|.|+|+|.+.
T Consensus 212 ~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W--~~~~~~~~~~~~~l~~-L~p~t~Y~~rVrA~n~ 278 (325)
T 1n26_A 212 PRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTF--TTWMVKDLQHHCVIHD-AWSGLRHVVQLRAQEE 278 (325)
T ss_dssp TTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCC--EEEECGGGCSEEEESS-CCTTCCEEEEEEEEET
T ss_pred CCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCC--EEEcccCCceEEEEeC-CCCCCeEEEEEEEecC
Confidence 3689999999743 2356899999998764332 2222334456899986 9999999999999983
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.5e-16 Score=124.53 Aligned_cols=161 Identities=16% Similarity=0.104 Sum_probs=92.4
Q ss_pred CCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecC---CCCCCcc
Q psy4956 20 NLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTP---PDPPTNL 96 (361)
Q Consensus 20 ~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~---~~~p~~l 96 (361)
..++.|.+|.|+++...... ..+....+.+++++.+|.|++.|.|+|+|.|..|.+..+....+.+. +..|..+
T Consensus 17 ~~~~~Vt~Y~~~~~~~~~~~---~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~ 93 (232)
T 4go6_B 17 GTNVMVTHYFLPPDDAVPSD---DDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCA 93 (232)
T ss_dssp SSEEEECEEECCCC---------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEE
T ss_pred CCCEEEEEEEEEeeCCCCCc---EEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCee
Confidence 44557889998876533222 22222233688999999999999999999997755433333444332 2223344
Q ss_pred EEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeE----------Eee-cCCCC-c-------eEEEcCCCCC
Q psy4956 97 SVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRI----------IGF-TENPP-A-------GYSLKDLTPG 155 (361)
Q Consensus 97 ~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~----------~~~-~~~~~-~-------~~~l~~L~p~ 155 (361)
.....+.+++.|+|.+|. +|.+.+|+|+|+..+....... ..+ ..... + ...+.+|.++
T Consensus 94 ~~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~ 173 (232)
T 4go6_B 94 IKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTK 173 (232)
T ss_dssp EEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSS
T ss_pred eEEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccC
Confidence 455667899999999987 5679999999987543221110 000 00111 0 1234578999
Q ss_pred cEEEEEEEEEeCCCCcccceeeeeccCC
Q psy4956 156 GSYQVQLFSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 156 ~~Y~v~v~a~~~~~~s~~~~~~~~~t~p 183 (361)
+.|.|+|+|.|..|.+..+....+.+.+
T Consensus 174 t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 174 PAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp EEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred CceEEEEEEECCCcCCCCcccEEeccCC
Confidence 9999999999999988765444444443
|
| >3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C | Back alignment and structure |
|---|
Probab=99.65 E-value=3.6e-13 Score=113.09 Aligned_cols=250 Identities=16% Similarity=0.155 Sum_probs=154.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCC----cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGK----YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~----~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
...||.||.+...+...+.|+|++|..+. -..|.+.++..+.+.|.. . ... ......|..+ |.++|++
T Consensus 11 ~~~pP~nl~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~~~w~~---~--~t~-~~~~~~L~~~--~~~rVrt 82 (317)
T 3qt2_A 11 SLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYET---R--ITE-SKAVTILHMG--FSASVRT 82 (317)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSCEEEEE---S--SSE-EEEECCCTTC--EEEEEEE
T ss_pred ccCCCcceEEEECCCceEEEEECCCCccccCcCcEEEEEEECCCCCcccEe---e--ccc-cccccccCCC--eEEEEEE
Confidence 36789999999888899999999954222 246888887764322221 1 112 4456677766 7778887
Q ss_pred EeCCCC----cccceeeeeccC----CCCCcceEEEecc-----------CCeEEEEeecCCCCCcceEEEEEEeCCCCC
Q psy4956 165 VYDSKE----SVAYTSRNFTTK----PNTPGKFIVWFRN-----------ETTLLVLWQPSYPASIYTHYKVSIDPPDAP 225 (361)
Q Consensus 165 ~~~~~~----s~~~~~~~~~t~----p~~p~~l~~~~~~-----------~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~ 225 (361)
....+. |.. ........ |..|.+|...... ...+.++|++......-+.|.+.|+..+.
T Consensus 83 ~~~~~~s~~~S~w-~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~~~~~t~Y~L~y~~~~~- 160 (317)
T 3qt2_A 83 ILQNDHSLLASSW-ASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTDAPEDTQYFLYYRYGSW- 160 (317)
T ss_dssp EEECSSCEEECCC-EEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTTCCTTCEEEEEEEETTE-
T ss_pred EECCCCCcccccc-ccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCCCCCCeeEEEEEEeCCC-
Confidence 765443 322 22222211 4568899887665 46899999986433445689999886541
Q ss_pred CceeEEeeccCCC-CCcEEEecCCC----CCCeEEEEEEEEeCCCCCCceEEEE----ecCCCCCccceEEeeecCCceE
Q psy4956 226 ESVLYVEKEGEPP-GPAQAAFKGLV----PGRAYNISVQTVSEDEISTPTTAQY----RTIPLRPLSFTYDKASITSNSL 296 (361)
Q Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~L~----p~t~Y~v~V~a~~~~~~s~~~~~~~----~t~~~~p~~l~~~~~~~~~~si 296 (361)
...........+ ....+.|.... ....|.|.|.+.++.+........+ ...|.||.+|.+ . ...+.+
T Consensus 161 -~~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i~s~~~~~~l~~iVkp~PP~nL~v--~-~~~~~l 236 (317)
T 3qt2_A 161 -TEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRPFDQLFALHAIDQINPPLNVTA--E-IEGTRM 236 (317)
T ss_dssp -EEECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCBCCEEEEEEHHHHBCCCCCEEEEE--E-EETTEE
T ss_pred -CeeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCCCCccccccceEEEHHHcCcCCCCceeEE--E-EeCCcE
Confidence 111100011011 12467776543 3468899998766544333322222 247889999999 4 335799
Q ss_pred EEEeeCCCCC--CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 297 RVVWEPPKGF--SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 297 ~l~W~~~~~~--~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.|+|++|.+. .....|+|+|+..+.... ..... ..+++.+ + |.||+.|.|+|+|..
T Consensus 237 ~v~W~~P~~~~~~~~L~Yevryr~~~~~~~--~~~~~--~~~~~~l-~-l~p~~~Y~vqVR~k~ 294 (317)
T 3qt2_A 237 SIQWEKPVSAFPIHCFDYEVKIHNTRNGYL--QIEKL--MTNAFIS-I-IDDLSKYDVQVRAAV 294 (317)
T ss_dssp EEEEECCSSSSCGGGEEEEEEEEETTTCCE--EEEEE--SSSEEEE-E-CCTTCCEEEEEEEEE
T ss_pred EEEECCCCcccccCceEEEEEEEeCCCCcc--eEEEE--eeeEEEe-e-cCCCCEEEEEEEEee
Confidence 9999998542 123589999998654221 11222 2346665 5 999999999999984
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=7.8e-14 Score=109.90 Aligned_cols=159 Identities=16% Similarity=0.109 Sum_probs=111.4
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCce-eEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
.+|.|+.+...+. ...|.|+++...+.-..|.|.|...+ .+. ..... ..+.+.|.+|.+++.|.++|+|.+
T Consensus 3 p~P~nv~~~s~n~-~~iL~W~pp~~~~~~v~Y~V~y~~~~--~w~~~c~~~-----~~~~c~lt~l~~~~~Y~~rV~A~~ 74 (201)
T 3lqm_A 3 PPPENVRMNSVNF-KNILQWESPAFAKGQLTFTAQYLSYR--IFQDKCMQT-----TLTECDFSSLSKYGDHTLRVRAEF 74 (201)
T ss_dssp CCCEEEEEEEETT-EEEEEEECCCCSSSCCEEEEEEEETT--EEEEEEEEE-----SSSEEECTTSCSSSCEEEEEEEEE
T ss_pred CCCcccEEEEECC-ceEEEECCCCCCCCCeEEEEEEEECC--CcccCcCcc-----CCCEEECCCCccCCCEEEEEEEec
Confidence 3789999986664 56799998754332336999998752 121 11111 247899999999999999999999
Q ss_pred CCCCCCceEEEE----ecCCCCCccceEEeeecCCceEEEEeeCCC---CCC--------CceeEEEEEEECCCCCCCCc
Q psy4956 263 EDEISTPTTAQY----RTIPLRPLSFTYDKASITSNSLRVVWEPPK---GFS--------EFDKYQVSINVRRPGASSTP 327 (361)
Q Consensus 263 ~~~~s~~~~~~~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~---~~~--------~~~~y~i~~~~~~~~~~~~~ 327 (361)
+.+.|......+ .+.+.|| .+.+ ....++|.|.|.+|. +.. .+..|+|.|.+.+.... .
T Consensus 75 ~~~~S~~s~~~f~~~~~t~~~PP-~v~~---~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~--~ 148 (201)
T 3lqm_A 75 ADEHSDWVQITFSPVDDTIIGPP-GMQV---EVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEK--F 148 (201)
T ss_dssp TTEECCCEEEEECHHHHSBCCCC-EEEE---EEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCC--E
T ss_pred CCCcCcceeeeeeecccCeeCCC-EEEE---EEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcE--E
Confidence 887776554333 2456666 5666 344679999999974 111 26799999988654221 1
Q ss_pred eeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 328 ITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
........+.+.+ |+|++.|-|+|+|...
T Consensus 149 --~~~~~~~~~~l~~-L~p~t~Ycv~V~a~~~ 177 (201)
T 3lqm_A 149 --QITPQYDFEVLRN-LEPWTTYCVQVRGFLP 177 (201)
T ss_dssp --EECCSSSEEEECS-CCTTCEEEEEEEEEET
T ss_pred --EEEecCceEEEec-CCCCCcEEEEEEEEec
Confidence 1234556899986 9999999999999873
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=4e-15 Score=106.16 Aligned_cols=108 Identities=17% Similarity=0.330 Sum_probs=89.1
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.+.|.+|.+|.+...+.+++.|+|.++ .+.+.+|.|.|...++......+ ....+.+.|.+|.|++.|.|+|.
T Consensus 5 ~t~p~~P~~l~~~~~t~~sv~lsW~~p--~~~i~~Y~v~y~~~~~~~~~~~v-----~~~~t~~~l~~L~P~t~Y~~~V~ 77 (115)
T 2cuh_A 5 SSGPDGPTQLRALNLTEGFAVLHWKPP--QNPVDTYDIQVTAPGAPPLQAET-----PGSAVDYPLHDLVLHTNYTATVR 77 (115)
T ss_dssp CCCCSSCEEEECCCCSSSCEEEEEECC--SSCCSEEEEEEECSSSCCEEEEE-----ETTCSEEEECSCCSSSEEEEEEE
T ss_pred ccCCCCCcceEEEeccCCeEEEEEECC--CCCccEEEEEEEcCCCCcEEEEE-----CCCccEEEEeCCCCCCEEEEEEE
Confidence 467889999999999999999999987 35789999999876543322222 23358999999999999999999
Q ss_pred EEeCCCCCCceEEEEecCCCCCccceEEeeecCCceE
Q psy4956 260 TVSEDEISTPTTAQYRTIPLRPLSFTYDKASITSNSL 296 (361)
Q Consensus 260 a~~~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si 296 (361)
|.++.+.+.+....+.|.+.+|.+|++ ..++.+++
T Consensus 78 A~~~~~~s~~~~~~~~T~~~~P~~l~~--~~vt~~s~ 112 (115)
T 2cuh_A 78 GLRGPNLTSPASITFTTGLEAPRDLEA--KEVTPSGP 112 (115)
T ss_dssp EEETTEECCCEEEEEESCCCCTTTSSS--CCCCCCCC
T ss_pred EEeCCCcCCCEEEEEEeCCCCCCCcEE--EEecCCcc
Confidence 999998888888889999999999999 77776553
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-13 Score=109.11 Aligned_cols=160 Identities=15% Similarity=0.128 Sum_probs=111.5
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
..+|.++.+..... ...|+|++|.. +.-..|.|+|+..+ .|. ..-.....+ .+.|.+|.++..|.++|+|.++.
T Consensus 2 lp~P~nv~~~s~n~-~~iL~W~pp~~~~~~v~Y~V~y~~~~--~w~-~~c~~~~~~-~c~lt~l~~~~~Y~~rV~A~~~~ 76 (201)
T 3lqm_A 2 VPPPENVRMNSVNF-KNILQWESPAFAKGQLTFTAQYLSYR--IFQ-DKCMQTTLT-ECDFSSLSKYGDHTLRVRAEFAD 76 (201)
T ss_dssp CCCCEEEEEEEETT-EEEEEEECCCCSSSCCEEEEEEEETT--EEE-EEEEEESSS-EEECTTSCSSSCEEEEEEEEETT
T ss_pred CCCCcccEEEEECC-ceEEEECCCCCCCCCeEEEEEEEECC--Ccc-cCcCccCCC-EEECCCCccCCCEEEEEEEecCC
Confidence 35688998876554 56799999863 22235999998752 222 111122344 89999999999999999999988
Q ss_pred CCcccceeeee----ccCCCCCcceEEEeccCCeEEEEeecCCCC--C---------cceEEEEEEeCCCCCCceeEEee
Q psy4956 169 KESVAYTSRNF----TTKPNTPGKFIVWFRNETTLLVLWQPSYPA--S---------IYTHYKVSIDPPDAPESVLYVEK 233 (361)
Q Consensus 169 ~~s~~~~~~~~----~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~---------~~~~y~v~~~~~~~~~~~~~~~~ 233 (361)
+.|..... .+ .+.+.|| .+.+. ...++|.|.|.+|... + .+..|.|.|...+...... ..
T Consensus 77 ~~S~~s~~-~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~-~~- 151 (201)
T 3lqm_A 77 EHSDWVQI-TFSPVDDTIIGPP-GMQVE-VLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQ-IT- 151 (201)
T ss_dssp EECCCEEE-EECHHHHSBCCCC-EEEEE-EETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEE-EC-
T ss_pred CcCcceee-eeeecccCeeCCC-EEEEE-EeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEE-EE-
Confidence 77765332 33 2446666 67774 4568999999876321 2 2679999887754433321 22
Q ss_pred ccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 234 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
.....+.|.+|+|++.|.|+|+|...
T Consensus 152 ----~~~~~~~l~~L~p~t~Ycv~V~a~~~ 177 (201)
T 3lqm_A 152 ----PQYDFEVLRNLEPWTTYCVQVRGFLP 177 (201)
T ss_dssp ----CSSSEEEECSCCTTCEEEEEEEEEET
T ss_pred ----ecCceEEEecCCCCCcEEEEEEEEec
Confidence 12368999999999999999999985
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-14 Score=116.66 Aligned_cols=173 Identities=10% Similarity=0.094 Sum_probs=106.4
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCCCcc--eEEEEEEeCCCCCC----ceeEEeeccCCCCCcEEEecCCCCCCeE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIY--THYKVSIDPPDAPE----SVLYVEKEGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~--~~y~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 254 (361)
..|..|.++.+.....+++.+.|++....+.. ..|.+.|...+... ................+...+|.+++.|
T Consensus 28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y 107 (236)
T 1axi_B 28 NSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPY 107 (236)
T ss_dssp ----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEE
T ss_pred CCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceE
Confidence 34788999988888889999999975322222 37888887543221 1111111111122344556789999999
Q ss_pred EEEEEEEeCCCCCCceEEE--EecCCCCCccceEEeeecCC----ceEEEEeeCCCCC----C-CceeEEEEEEECCCCC
Q psy4956 255 NISVQTVSEDEISTPTTAQ--YRTIPLRPLSFTYDKASITS----NSLRVVWEPPKGF----S-EFDKYQVSINVRRPGA 323 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~~~~--~~t~~~~p~~l~~~~~~~~~----~si~l~W~~~~~~----~-~~~~y~i~~~~~~~~~ 323 (361)
.|+|.| | .+.+.+..+. ....|.||.+|.+.....+. ..+.|+|++|... + .+..|+|+|+..+...
T Consensus 108 ~~~V~a-N-~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~ 185 (236)
T 1axi_B 108 CIKLTS-N-GGTVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETK 185 (236)
T ss_dssp EEEEEE-T-TEEEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSS
T ss_pred EEEEEE-C-CccCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCc
Confidence 999999 7 3333332221 12368899999642244433 3599999998531 1 4679999999876422
Q ss_pred CCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 324 SSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.... .....+++.+.+ |+||+.|.|+|+|...
T Consensus 186 --w~~~-~~~~~~~~~l~~-L~p~t~Y~vqVRa~~~ 217 (236)
T 1axi_B 186 --WKMM-DPILTTSVPVYS-LKVDKEYEVRVRSKQR 217 (236)
T ss_dssp --CEEC-CCBSSSEEEEEE-EETTSCEEEEEEEEET
T ss_pred --eEEE-eccCCCEEEEec-cCCCCEEEEEEEEEEC
Confidence 2222 122457899996 9999999999999864
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.7e-15 Score=119.84 Aligned_cols=155 Identities=12% Similarity=0.087 Sum_probs=90.6
Q ss_pred CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccC---CCCCcceEEE
Q psy4956 116 GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK---PNTPGKFIVW 192 (361)
Q Consensus 116 ~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~---p~~p~~l~~~ 192 (361)
+.+.+|.|++..... .+ .........+ ++.+.+|.|++.|.|+|+|.+..|.+..+....+.+. |..|..+...
T Consensus 20 ~~Vt~Y~~~~~~~~~-~~-~~~~~~~~~t-~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~~~ 96 (232)
T 4go6_B 20 VMVTHYFLPPDDAVP-SD-DDLGTVPDYN-QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKI 96 (232)
T ss_dssp EEECEEECCCC---------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEEEE
T ss_pred EEEEEEEEEeeCCCC-Cc-EEEEECCCcc-EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeeeEE
Confidence 346778876543221 11 1222223344 8999999999999999999999888765444444433 2223344445
Q ss_pred eccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeE----------EeeccCCCCCcE-------EEecCCCCCCeE
Q psy4956 193 FRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLY----------VEKEGEPPGPAQ-------AAFKGLVPGRAY 254 (361)
Q Consensus 193 ~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~----------~~~~~~~~~~~~-------~~~~~L~p~t~Y 254 (361)
..+.+++.|+|.+|... |.+.+|.|.|........... ............ ..+.+|.+++.|
T Consensus 97 ~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t~Y 176 (232)
T 4go6_B 97 SKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAI 176 (232)
T ss_dssp EEETTEEEEEEECCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSEEE
T ss_pred ecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCCce
Confidence 56788999999987544 789999999986543221100 000000000111 234578999999
Q ss_pred EEEEEEEeCCCCCCceEEE
Q psy4956 255 NISVQTVSEDEISTPTTAQ 273 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~~~~ 273 (361)
.|+|+|.|..|.++.+.+.
T Consensus 177 ~frV~A~N~~G~Gp~S~v~ 195 (232)
T 4go6_B 177 IFRIAARNEKGYGPATQVR 195 (232)
T ss_dssp EEEEEEECSSCBCCCEEEE
T ss_pred EEEEEEECCCcCCCCcccE
Confidence 9999999999998877653
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.57 E-value=7.4e-14 Score=123.22 Aligned_cols=180 Identities=17% Similarity=0.170 Sum_probs=123.9
Q ss_pred eEEEecCCCCCCccEEEEEeCCEEEEEeeCCCCCC-----cccEEEEEEECCCCCCCeEEeec---CCCCceEEEcCCCC
Q psy4956 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGK-----YSGFKLKVISLSEKTPPRIIGFT---ENPPAGYSLKDLTP 154 (361)
Q Consensus 83 ~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~-----~~~y~v~~~~~~~~~~~~~~~~~---~~~~~~~~l~~L~p 154 (361)
.+.+..+|.+|.++.........+.++|+++.+.. ...|.|.|+..+ ....+.... .... .+.+.+|.+
T Consensus 275 ~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g--~~~~C~~~~~~~~~~~-~C~~~~l~~ 351 (483)
T 3e0g_A 275 VIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSG--KYVRLKRAEAPTNESY-QLLFQMLPN 351 (483)
T ss_dssp EEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTC--CEEEECCCSSCSCSCE-EEEEECCTT
T ss_pred EEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECC--CCccccCCcccCCCEE-EEEEccCCC
Confidence 45556678899999888777789999999976433 578999886432 111121111 1233 789999999
Q ss_pred CcEEEEEEEEEeCCCCcccceeeee--ccCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEE
Q psy4956 155 GGSYQVQLFSVYDSKESVAYTSRNF--TTKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYV 231 (361)
Q Consensus 155 ~~~Y~v~v~a~~~~~~s~~~~~~~~--~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~ 231 (361)
.+.|.|+|.|.+..|.+........ ...|.||.++.+...+.+.+.|+|++|... +....|.|+|+..+........
T Consensus 352 ~t~Y~f~V~A~N~lG~~~S~~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~~v 431 (483)
T 3e0g_A 352 QEIYNFTLNAHNPLGRSQSTILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRNV 431 (483)
T ss_dssp CCCEEEEEEEECSSCEEEEEEEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEEEC
T ss_pred CcEEEEEEEEEeCCCCcccceEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceEEE
Confidence 9999999999998876643211111 134889999999877888999999877432 4567999999987654311111
Q ss_pred eeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCC
Q psy4956 232 EKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~ 266 (361)
...........+.+.+|.|++.|.|+|+|. ..+.
T Consensus 432 sv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~ 465 (483)
T 3e0g_A 432 TIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETF 465 (483)
T ss_dssp CCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSC
T ss_pred EEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCC
Confidence 111000122467899999999999999999 5443
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=99.57 E-value=5.2e-14 Score=113.78 Aligned_cols=171 Identities=11% Similarity=0.105 Sum_probs=106.5
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCCCCc---ccEEEEEEECCCCCC-CeEEeecC----CCC-ceEEEcCCCCCcEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKY---SGFKLKVISLSEKTP-PRIIGFTE----NPP-AGYSLKDLTPGGSY 158 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~---~~y~v~~~~~~~~~~-~~~~~~~~----~~~-~~~~l~~L~p~~~Y 158 (361)
.+|..|.++.........+.++|+++..+.. ..|.+.|+......+ .....+.. ... +.+...+|.+++.|
T Consensus 28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y 107 (236)
T 1axi_B 28 NSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPY 107 (236)
T ss_dssp ----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEE
T ss_pred CCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceE
Confidence 4678888887776678899999998654433 389999876432210 11122211 122 24445679999999
Q ss_pred EEEEEEEeCCCCccccee-eeeccCCCCCcceEEE--eccCC----eEEEEeecCCCC----C-cceEEEEEEeCCCCCC
Q psy4956 159 QVQLFSVYDSKESVAYTS-RNFTTKPNTPGKFIVW--FRNET----TLLVLWQPSYPA----S-IYTHYKVSIDPPDAPE 226 (361)
Q Consensus 159 ~v~v~a~~~~~~s~~~~~-~~~~t~p~~p~~l~~~--~~~~~----~~~v~W~~~~~~----~-~~~~y~v~~~~~~~~~ 226 (361)
.|+|.| + ...+.+... ......|.||.++.+. ..+.+ .+.|+|++|... | .+..|.|+|+..+...
T Consensus 108 ~~~V~a-N-~~~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~ 185 (236)
T 1axi_B 108 CIKLTS-N-GGTVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETK 185 (236)
T ss_dssp EEEEEE-T-TEEEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSS
T ss_pred EEEEEE-C-CccCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCc
Confidence 999999 7 433322111 1112358899999643 33222 499999887432 3 4679999999876544
Q ss_pred ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCC
Q psy4956 227 SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDE 265 (361)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~ 265 (361)
+... . ....+.+.|.+|.|++.|.|+|+|....|
T Consensus 186 w~~~-~----~~~~~~~~l~~L~p~t~Y~vqVRa~~~~g 219 (236)
T 1axi_B 186 WKMM-D----PILTTSVPVYSLKVDKEYEVRVRSKQRNS 219 (236)
T ss_dssp CEEC-C----CBSSSEEEEEEEETTSCEEEEEEEEETTS
T ss_pred eEEE-e----ccCCCEEEEeccCCCCEEEEEEEEEECCC
Confidence 3321 1 12248899999999999999999998766
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=99.55 E-value=8.9e-14 Score=97.05 Aligned_cols=95 Identities=28% Similarity=0.396 Sum_probs=77.2
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|++|.+|.+...+.+++.|+|++|. +.+.+|+|.|+..+..+......+....+ ++.|.+|.|++.|.|+|.|.+..
T Consensus 2 ~p~~P~~l~v~~~t~~sv~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~~~v~~~~~-~~~l~~L~p~t~Y~~~V~A~~~~ 79 (104)
T 2rb8_A 2 RLDAPSQIEVKDVTDTTALITWMPPS-QPVDGFELTYGIKDVPGDRTTIDLTEDEN-QYSIGNLKPDTEYEVSLISRRGD 79 (104)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCS-SCCSEEEEEEEETTCTTCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEEETT
T ss_pred CCCCCCccEEEEecCCeEEEEEcCCC-CccceEEEEEEECcCCCceEEEEcCCCcC-EEEeCCCCCCCEEEEEEEEEeCC
Confidence 57899999999999999999999985 78999999998865334455666777777 99999999999999999999999
Q ss_pred CCcccceeeeeccCCCCC
Q psy4956 169 KESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 169 ~~s~~~~~~~~~t~p~~p 186 (361)
|.+.+ ....++|.+..|
T Consensus 80 g~s~p-~~~~~~T~~~~~ 96 (104)
T 2rb8_A 80 MSSNP-AKETFTTGLAAA 96 (104)
T ss_dssp EECCC-EEEEEECCC---
T ss_pred ccCCC-EEEEEECCCCcc
Confidence 88876 455677765443
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.2e-14 Score=102.27 Aligned_cols=107 Identities=21% Similarity=0.302 Sum_probs=87.7
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.+.|.+|.+|.+...+.+++.|+|.+|. +.+.+|+|.|+..++ ......+....+ .+.|.+|.|++.|.|+|+|.+
T Consensus 5 ~t~p~~P~~l~~~~~t~~sv~lsW~~p~-~~i~~Y~v~y~~~~~--~~~~~~v~~~~t-~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 5 SSGPDGPTQLRALNLTEGFAVLHWKPPQ-NPVDTYDIQVTAPGA--PPLQAETPGSAV-DYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp CCCCSSCEEEECCCCSSSCEEEEEECCS-SCCSEEEEEEECSSS--CCEEEEEETTCS-EEEECSCCSSSEEEEEEEEEE
T ss_pred ccCCCCCcceEEEeccCCeEEEEEECCC-CCccEEEEEEEcCCC--CcEEEEECCCcc-EEEEeCCCCCCEEEEEEEEEe
Confidence 4678999999999999999999999974 678999999986542 344556667777 999999999999999999999
Q ss_pred CCCCcccceeeeeccCCCCCcceEEEeccCCe
Q psy4956 167 DSKESVAYTSRNFTTKPNTPGKFIVWFRNETT 198 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~ 198 (361)
+.+.+.+ ....++|.+.+|.+|.+..++.++
T Consensus 81 ~~~~s~~-~~~~~~T~~~~P~~l~~~~vt~~s 111 (115)
T 2cuh_A 81 GPNLTSP-ASITFTTGLEAPRDLEAKEVTPSG 111 (115)
T ss_dssp TTEECCC-EEEEEESCCCCTTTSSSCCCCCCC
T ss_pred CCCcCCC-EEEEEEeCCCCCCCcEEEEecCCc
Confidence 8877765 456678888889999887776654
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-13 Score=95.45 Aligned_cols=82 Identities=16% Similarity=0.321 Sum_probs=70.6
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
|.+.+|.+|++...+.+++.|+|++|. ++.+.+|+|.|+..++....+...+....+ ++.|.+|.|++.|.|+|+|.+
T Consensus 3 t~~~~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t-~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 3 SVSSVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFTVPYSSS-TATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp EEEBSSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEEEcCCCcc-EEEECCCCCCCEEEEEEEEEe
Confidence 467899999999999999999999975 368999999999875444456666777777 999999999999999999999
Q ss_pred CCCC
Q psy4956 167 DSKE 170 (361)
Q Consensus 167 ~~~~ 170 (361)
..+.
T Consensus 82 ~~~~ 85 (101)
T 3k2m_C 82 EDSA 85 (101)
T ss_dssp ECTT
T ss_pred CCcc
Confidence 9888
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-13 Score=96.45 Aligned_cols=93 Identities=20% Similarity=0.259 Sum_probs=77.1
Q ss_pred EecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 86 ~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
+++++.+|.+|.+..++.+++.|+|+++ .+.+.+|+|.|+..++ ...+...+....+ ++.|.+|.|++.|.|+|.|.
T Consensus 4 ~t~p~~pP~~l~~~~vt~tsi~vsW~pp-~~~i~~Y~I~y~~~~~-~~~~~~~v~~~~t-~~~l~~L~p~T~Y~v~V~A~ 80 (108)
T 2ee3_A 4 GSSGLAPPRHLGFSDVSHDAARVFWEGA-PRPVRLVRVTYVSSEG-GHSGQTEAPGNAT-SAMLGPLSSSTTYTVRVTCL 80 (108)
T ss_dssp CCCCCCCSSCEEEESCCSSCEEEEESCC-SSCCSEEEEEEEETTT-CCBCCEEEETTCC-EEEECSCCSSCEEEEEEEEE
T ss_pred cccCCCCCceEEEEEccCCeEEEEeeCC-CCCccEEEEEEEeCCC-CceeEEEcCCCcC-EEEcCCCCCCCEEEEEEEEE
Confidence 4567889999999999999999999997 5889999999988654 3344556666677 99999999999999999999
Q ss_pred eCCCCcccceeeeeccC
Q psy4956 166 YDSKESVAYTSRNFTTK 182 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~ 182 (361)
+..|.+.+.. ..++|.
T Consensus 81 ~~~g~s~p~~-~~~~T~ 96 (108)
T 2ee3_A 81 YPGGGSSTLT-GRVTTK 96 (108)
T ss_dssp CTTSCEEEEE-EEEECC
T ss_pred eCCCcCCCcc-CEEEeC
Confidence 9999987644 356665
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.2e-13 Score=104.88 Aligned_cols=171 Identities=11% Similarity=0.070 Sum_probs=100.4
Q ss_pred CCcceEEEec-cCCeEEEEeecCCCCCcce-EEEEEEeCCCC-CCceeE------Eeec-cCCCCCcEEEecCCCCCCeE
Q psy4956 185 TPGKFIVWFR-NETTLLVLWQPSYPASIYT-HYKVSIDPPDA-PESVLY------VEKE-GEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 185 ~p~~l~~~~~-~~~~~~v~W~~~~~~~~~~-~y~v~~~~~~~-~~~~~~------~~~~-~~~~~~~~~~~~~L~p~t~Y 254 (361)
.|.||..... ....+...|++........ .|.+.|...+. ...... .... ........+.|..+...+.|
T Consensus 3 ~~~nlsC~~~~~~~~~~C~W~~g~~~~l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~~Y 82 (206)
T 3v6o_A 3 VNINISCETDGYLTKMTCRWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSGY 82 (206)
T ss_dssp -CCCCEEEECTTSSCEEEEECCCC--------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTSCE
T ss_pred CCEEEEEEECCCCcEEEEEecCCCcCCcccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhcccE
Confidence 5678888777 4579999999864333334 68888765331 000000 0000 00123457888888889999
Q ss_pred EEEEEEEeCCCCCCceEEEE----ecCCCCCccceEEeeec-CCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCcee
Q psy4956 255 NISVQTVSEDEISTPTTAQY----RTIPLRPLSFTYDKASI-TSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPIT 329 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~~~~~----~t~~~~p~~l~~~~~~~-~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~ 329 (361)
.|+|.|.|+.|...+....+ ...|+||.++.+ ... ..+++.|+|++|........|+|+|+..+... .....
T Consensus 83 ~~~V~a~N~~G~~~s~~~~~~~~~~vkp~pP~~l~v--~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~-~w~~~ 159 (206)
T 3v6o_A 83 TMWIRINHSLGSLDSPPTCVLPDSVVKPLPPSSVKA--EITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEV-QWKMY 159 (206)
T ss_dssp EEEEEEC---CCEECCCEEECGGGGBCCCCCCSCEE--EEETTTTEEEEEC--------CEEEEEEEEESSSSC-CCEEE
T ss_pred EEEEEEEcCCccccCCcccEeecceEcCCCCCceEe--EEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCC-ceEEE
Confidence 99999999877543222222 346889999999 444 57899999998754323579999999875211 22222
Q ss_pred ec-CCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 330 KS-RDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 330 ~~-~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.. ......+.+.+ |+||+.|.|+|+|...
T Consensus 160 ~~~~~~~~~~~l~~-L~p~t~Y~vqVRa~~~ 189 (206)
T 3v6o_A 160 EVYDAKSKSVSLPV-PDLCAVYAVQVRCKRL 189 (206)
T ss_dssp EECC---CEEEECC-SCTTSCEEEEEEEEET
T ss_pred ecccCcceeEEeec-CCCCCEEEEEEEEecC
Confidence 22 22234688886 9999999999999873
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-13 Score=95.16 Aligned_cols=93 Identities=13% Similarity=0.081 Sum_probs=75.8
Q ss_pred eccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCce-eEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 179 FTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 179 ~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
+++.+.+|.+|.+...+.+++.|+|+++ .+.+.+|+|.|...++.... ..+. +..+++.|.+|.|++.|.|+
T Consensus 4 ~t~p~~pP~~l~~~~vt~tsi~vsW~pp--~~~i~~Y~I~y~~~~~~~~~~~~v~-----~~~t~~~l~~L~p~T~Y~v~ 76 (108)
T 2ee3_A 4 GSSGLAPPRHLGFSDVSHDAARVFWEGA--PRPVRLVRVTYVSSEGGHSGQTEAP-----GNATSAMLGPLSSSTTYTVR 76 (108)
T ss_dssp CCCCCCCSSCEEEESCCSSCEEEEESCC--SSCCSEEEEEEEETTTCCBCCEEEE-----TTCCEEEECSCCSSCEEEEE
T ss_pred cccCCCCCceEEEEEccCCeEEEEeeCC--CCCccEEEEEEEeCCCCceeEEEcC-----CCcCEEEcCCCCCCCEEEEE
Confidence 3455678999999999999999999987 47899999999876553322 2222 33588999999999999999
Q ss_pred EEEEeCCCCCCceEEEEecCC
Q psy4956 258 VQTVSEDEISTPTTAQYRTIP 278 (361)
Q Consensus 258 V~a~~~~~~s~~~~~~~~t~~ 278 (361)
|.|+++.|.+.+....+.|..
T Consensus 77 V~A~~~~g~s~p~~~~~~T~~ 97 (108)
T 2ee3_A 77 VTCLYPGGGSSTLTGRVTTKK 97 (108)
T ss_dssp EEEECTTSCEEEEEEEEECCC
T ss_pred EEEEeCCCcCCCccCEEEeCC
Confidence 999999999988887777763
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.9e-13 Score=93.95 Aligned_cols=95 Identities=19% Similarity=0.311 Sum_probs=77.2
Q ss_pred eeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 178 ~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
.+++.|.+|.+|.+...+.+++.|+|+++ .+.+.+|.|.|...++......+ ....+++.|.+|.|++.|.|+
T Consensus 3 ~~~t~p~~P~~l~v~~~~~~sv~lsW~~p--~~~i~~Y~i~y~~~~~~~~~~~~-----~~~~ts~~l~~L~p~t~Y~~~ 75 (105)
T 2cum_A 3 SGSSGLEAPRDLEAKEVTPRTALLTWTEP--PVRPAGYLLSFHTPGGQTQEILL-----PGGITSHQLLGLFPSTSYNAR 75 (105)
T ss_dssp SCCTTCCCCEEEEEESCCSSCEEEEEECC--SSCCSEEEEEEECTTSCEEEEEE-----CSSCSEEEECSCCTTCEEEEE
T ss_pred ccccCCCCCCceEEEeccCCEEEEEEcCC--CCccceEEEEEEeCCCceEEEEE-----CCCccEEEECCCCCCCEEEEE
Confidence 34577899999999999999999999987 35789999999876552221111 344689999999999999999
Q ss_pred EEEEeCCCCCCceEEEEecCCC
Q psy4956 258 VQTVSEDEISTPTTAQYRTIPL 279 (361)
Q Consensus 258 V~a~~~~~~s~~~~~~~~t~~~ 279 (361)
|.|.++.|.+.+....+.|...
T Consensus 76 V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 76 LQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp EEEEBTTBCCCCEEEEEECCCS
T ss_pred EEEEeCCcccCCEEEEEEeCCc
Confidence 9999999999998888877643
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-13 Score=92.99 Aligned_cols=83 Identities=17% Similarity=0.326 Sum_probs=71.1
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
|.+++|.+|.+...+.+++.|+|++| .+.+.+|+|.|+..++..+.+...+....+ ++.|.+|.|++.|.|+|+|.+.
T Consensus 3 t~~~~P~~l~v~~~t~~Si~lsW~~p-~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t-~~~l~~L~p~t~Y~v~V~A~~~ 80 (97)
T 3qht_C 3 SVSSVPTKLEVVAATPTSLLISWDAS-SSSVSYYRITYGETGGNSPVQEFTVPGSSS-TATISGLSPGVDYTITVYAYYS 80 (97)
T ss_dssp --CCSSSSCEEEEEETTEEEEECCCC-CSSCCEEEEEEEESSSCSCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEEeCC-CCCCCEEEEEEEECCCCCccEEEEeCCCcC-EEEeCCCCCCCEEEEEEEEEeC
Confidence 57889999999999999999999997 578999999999876544456677777777 9999999999999999999998
Q ss_pred CCCcc
Q psy4956 168 SKESV 172 (361)
Q Consensus 168 ~~~s~ 172 (361)
.|.+.
T Consensus 81 ~G~gp 85 (97)
T 3qht_C 81 YYDLY 85 (97)
T ss_dssp ETTEE
T ss_pred CccCC
Confidence 88774
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=98.06 Aligned_cols=98 Identities=18% Similarity=0.302 Sum_probs=76.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|++|.+|.+...+.+++.|+|++| .+.+.+|+|.|+..++....+...+....+ ++.|.+|.|++.|.|+|+|.+..
T Consensus 3 vP~~P~~L~v~~~t~~Sv~lsW~~p-~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~t-s~~l~gL~P~T~Y~v~V~A~~~~ 80 (114)
T 3qwq_B 3 VSDVPRDLEVVAATPTSLLISWDSG-RGSYQYYRITYGETGGNSPVQEFTVPGPVH-TATISGLKPGVDYTITVYAVTDH 80 (114)
T ss_dssp --CCCEEEEEEEEETTEEEEEEECC-SCCCSEEEEEEEESSCSSCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEEEEE
T ss_pred CCCCCCceEEEecCCCEEEEEEcCC-cCcccEEEEEEEECCCCCccEEEEeCCCcC-EEEeCCCCCCCEEEEEEEEEECC
Confidence 4789999999999999999999997 588999999999876543456667777777 99999999999999999999988
Q ss_pred CCcccceeeeeccCCCCCcceEEE
Q psy4956 169 KESVAYTSRNFTTKPNTPGKFIVW 192 (361)
Q Consensus 169 ~~s~~~~~~~~~t~p~~p~~l~~~ 192 (361)
| . ......|.+.+|.+|.+.
T Consensus 81 G-~---~~~~~~T~~~~P~~l~~~ 100 (114)
T 3qwq_B 81 K-P---HADGPHTYHESPISINYR 100 (114)
T ss_dssp E-S---STTSCCEEEEEEEEEEEE
T ss_pred c-c---EEEEeEcCCCCCceeEEE
Confidence 7 1 222223344556566554
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=8e-13 Score=91.94 Aligned_cols=84 Identities=13% Similarity=0.211 Sum_probs=71.4
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.+.+++|.+|.+...+.+++.|+|++|. ++.+.+|+|.|+..+.........+....+ ++.|.+|.|++.|.|+|+|
T Consensus 5 ~t~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~t-s~~l~~L~p~t~Y~~~V~A 83 (103)
T 3t04_D 5 SSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYS-TATISGLKPGVDYTITVYA 83 (103)
T ss_dssp SCCCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEEETTCC-EEEECSCCTTCCEEEEEEE
T ss_pred cccCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEcCCCcC-EEEeCCCCCCCEEEEEEEE
Confidence 3568899999999999999999999986 378999999999875444566677777777 9999999999999999999
Q ss_pred EeC--CCCc
Q psy4956 165 VYD--SKES 171 (361)
Q Consensus 165 ~~~--~~~s 171 (361)
.+. .|.+
T Consensus 84 ~~~~~~G~~ 92 (103)
T 3t04_D 84 YDTFFPGYE 92 (103)
T ss_dssp ESCCCTTCC
T ss_pred EeCCCCCCC
Confidence 977 5544
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.7e-13 Score=94.54 Aligned_cols=93 Identities=14% Similarity=0.251 Sum_probs=77.4
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCC----------CceeEEeeccCCCCCcEEEecCCCCC
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP----------ESVLYVEKEGEPPGPAQAAFKGLVPG 251 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~L~p~ 251 (361)
.|.+|.+|.+...+.+++.|+|+++ .+.+++|+|.|...++. .....+ ++..+++.|.+|.|+
T Consensus 8 ~pp~p~~L~v~~~T~~Si~LsW~~p--~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v-----~~~~t~~~l~gL~Pg 80 (112)
T 2cui_A 8 SRPRLSQLSVTDVTTSSLRLNWEAP--PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV-----PGTRHSAVLRDLRSG 80 (112)
T ss_dssp CCCCCCCCEEESCCSSCEEEECCCC--TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEE-----ETTCCEEEECSCCTT
T ss_pred CCCCCCceEEEeecCCeEEEEECCC--CCCccEEEEEEEeCCCCccccccccCcceEEEc-----CCCcCEEEeCCCCCC
Confidence 4668899999999999999999986 57889999999977553 122222 234589999999999
Q ss_pred CeEEEEEEEEeCCCCCCceEEEEecCCCCC
Q psy4956 252 RAYNISVQTVSEDEISTPTTAQYRTIPLRP 281 (361)
Q Consensus 252 t~Y~v~V~a~~~~~~s~~~~~~~~t~~~~p 281 (361)
+.|.|+|+|+++.+.+.+....+.|.+.++
T Consensus 81 T~Y~~~V~A~~~~~~s~p~~~~~~T~~~~~ 110 (112)
T 2cui_A 81 TLYSLTLYGLRGPHKADSIQGTARTLSGPS 110 (112)
T ss_dssp CEEEEEEEEECSSSEEEEEEEEEECCCCSC
T ss_pred CEEEEEEEEEECCcccCCEEEEEEECCCCC
Confidence 999999999999999999999999987665
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.6e-13 Score=93.42 Aligned_cols=91 Identities=26% Similarity=0.432 Sum_probs=74.1
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCC--ceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
|.+.+|.+|++...+.+++.|+|+++...+.+.+|.|.|...++.. ....+. ...+++.|.+|.|++.|.|+|
T Consensus 3 t~~~~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~~v~-----~~~t~~~l~~L~p~t~Y~~~V 77 (101)
T 3k2m_C 3 SVSSVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFTVP-----YSSSTATISGLSPGVDYTITV 77 (101)
T ss_dssp EEEBSSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEEEEE-----TTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEEEcC-----CCccEEEECCCCCCCEEEEEE
Confidence 4467899999999999999999998754478999999999765432 222222 335899999999999999999
Q ss_pred EEEeCCCC-----CCceEEEEec
Q psy4956 259 QTVSEDEI-----STPTTAQYRT 276 (361)
Q Consensus 259 ~a~~~~~~-----s~~~~~~~~t 276 (361)
+|.++.+. +.|....++|
T Consensus 78 ~A~~~~~~~~~~~s~p~~~~~~T 100 (101)
T 3k2m_C 78 YAWGEDSAGYMFMYSPISINYRT 100 (101)
T ss_dssp EEEEECTTSCEEECBCEEEEEEC
T ss_pred EEEeCCccceeecCCCEEEEeec
Confidence 99999999 8888877765
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=99.49 E-value=5.3e-13 Score=93.07 Aligned_cols=94 Identities=19% Similarity=0.296 Sum_probs=74.1
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC-CCce-eEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA-PESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.+|.+|.+...+.+++.|+|+++. +.+.+|.|.|...+. .... ..+ ....+++.|.+|+|++.|.|+|.
T Consensus 2 ~p~~P~~l~v~~~t~~sv~lsW~~p~--~~i~~Y~v~y~~~~~~~~~~~~~v-----~~~~~~~~l~~L~p~t~Y~~~V~ 74 (104)
T 2rb8_A 2 RLDAPSQIEVKDVTDTTALITWMPPS--QPVDGFELTYGIKDVPGDRTTIDL-----TEDENQYSIGNLKPDTEYEVSLI 74 (104)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCS--SCCSEEEEEEEETTCTTCCEEEEE-----ETTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCCCccEEEEecCCeEEEEEcCCC--CccceEEEEEEECcCCCceEEEEc-----CCCcCEEEeCCCCCCCEEEEEEE
Confidence 47889999999999999999999873 778999999976542 2222 222 23458999999999999999999
Q ss_pred EEeCCCCCCceEEEEecCCCCCc
Q psy4956 260 TVSEDEISTPTTAQYRTIPLRPL 282 (361)
Q Consensus 260 a~~~~~~s~~~~~~~~t~~~~p~ 282 (361)
|.++.|.+.+....+.|.+..|+
T Consensus 75 A~~~~g~s~p~~~~~~T~~~~~~ 97 (104)
T 2rb8_A 75 SRRGDMSSNPAKETFTTGLAAAL 97 (104)
T ss_dssp EEETTEECCCEEEEEECCC----
T ss_pred EEeCCccCCCEEEEEECCCCccc
Confidence 99999999999888888877664
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=7.6e-12 Score=99.74 Aligned_cols=172 Identities=15% Similarity=0.165 Sum_probs=114.3
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCC--CCcEEEEEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLT--PGGSYQVQLFSV 165 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~--p~~~Y~v~v~a~ 165 (361)
..+|.|+++....- ...|+|+++.. +....|.|+|+..+...|.....+.......+.|+++. +...|.++|+|.
T Consensus 9 lp~P~nv~~~s~n~-~~iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A~ 87 (221)
T 4doh_R 9 LPKPANITFLSINM-KNVLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRAI 87 (221)
T ss_dssp --CCEEEEEEEETT-EEEEEEECCCCSSCCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEEE
T ss_pred CCCCceeEEEEECC-cEEEEEcCCCCCCCCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEEEE
Confidence 45689999988555 45699999753 45678999999764434432212211221389998864 567899999999
Q ss_pred eCCCCcccceeeee----ccCCCCCcceEEEeccCCeEEEEeecCCCC-----Cc---------ceEEEEEEeCCCCCCc
Q psy4956 166 YDSKESVAYTSRNF----TTKPNTPGKFIVWFRNETTLLVLWQPSYPA-----SI---------YTHYKVSIDPPDAPES 227 (361)
Q Consensus 166 ~~~~~s~~~~~~~~----~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-----~~---------~~~y~v~~~~~~~~~~ 227 (361)
.+++.|.+.....| .+...||. +.+. ....+|.|.|.+|... +. ...|.|.|...+....
T Consensus 88 ~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~ 165 (221)
T 4doh_R 88 WGTKCSKWAESGRFYPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT 165 (221)
T ss_dssp SSSCBCCCEECCCBCHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE
T ss_pred cCCcccCCEecCceechhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE
Confidence 98887765443333 24456675 8877 4667999999876421 21 3489999987654432
Q ss_pred eeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC--CCCCCce
Q psy4956 228 VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE--DEISTPT 270 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~--~~~s~~~ 270 (361)
.. ... ....+.|.+|.|++.|.|+|+|... .+.+..+
T Consensus 166 ~~-~~~-----~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S 204 (221)
T 4doh_R 166 WS-QCV-----TNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPS 204 (221)
T ss_dssp EE-EEE-----CSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCC
T ss_pred EE-Eee-----cCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCC
Confidence 11 111 1368889999999999999999864 3444433
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.8e-13 Score=97.29 Aligned_cols=115 Identities=13% Similarity=0.170 Sum_probs=84.4
Q ss_pred EEEecCCcCcccee-eEEEec---CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCC-CCeEEeecC
Q psy4956 69 LYYTNSTVHDWLTW-TASITT---PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKT-PPRIIGFTE 141 (361)
Q Consensus 69 V~a~~~~~~~~~~~-~~~~~t---~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~-~~~~~~~~~ 141 (361)
|+|.|..|....+. .+.+.+ .|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+... ......+..
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~ 82 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAP 82 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECT
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEEEEeCC
Confidence 45666553332221 233333 47788999999999999999999986 467889999999865432 222334555
Q ss_pred CCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccCCC
Q psy4956 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPN 184 (361)
Q Consensus 142 ~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p~ 184 (361)
... .+.|.+|.|++.|.|+|+|.+..|.+..+....++|.+.
T Consensus 83 ~~~-~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 83 SAR-QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp TCC-EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred Cce-EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 666 999999999999999999999999887766667777643
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=9.2e-13 Score=92.53 Aligned_cols=95 Identities=18% Similarity=0.270 Sum_probs=77.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCC--------CCCeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK--------TPPRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
.|.+|.+|++...+.+++.|+|++| .+.+.+|+|.|...++. ...+...+....+ ++.|.+|.|++.|.|
T Consensus 8 ~pp~p~~L~v~~~T~~Si~LsW~~p-~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t-~~~l~gL~PgT~Y~~ 85 (112)
T 2cui_A 8 SRPRLSQLSVTDVTTSSLRLNWEAP-PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRH-SAVLRDLRSGTLYSL 85 (112)
T ss_dssp CCCCCCCCEEESCCSSCEEEECCCC-TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCC-EEEECSCCTTCEEEE
T ss_pred CCCCCCceEEEeecCCeEEEEECCC-CCCccEEEEEEEeCCCCccccccccCcceEEEcCCCcC-EEEeCCCCCCCEEEE
Confidence 4677899999999999999999987 58899999999876532 1246677777777 999999999999999
Q ss_pred EEEEEeCCCCcccceeeeeccCCCCC
Q psy4956 161 QLFSVYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 161 ~v~a~~~~~~s~~~~~~~~~t~p~~p 186 (361)
.|+|.+..+.+.+ .....+|.+.++
T Consensus 86 ~V~A~~~~~~s~p-~~~~~~T~~~~~ 110 (112)
T 2cui_A 86 TLYGLRGPHKADS-IQGTARTLSGPS 110 (112)
T ss_dssp EEEEECSSSEEEE-EEEEEECCCCSC
T ss_pred EEEEEECCcccCC-EEEEEEECCCCC
Confidence 9999998888765 455666665443
|
| >3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=4e-13 Score=106.24 Aligned_cols=164 Identities=15% Similarity=0.100 Sum_probs=95.6
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCC--CcccEEEEEEECCCCCCCeEEee-cCCCCceEEEcC--CCCCcEEEEEEEEE
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISG--KYSGFKLKVISLSEKTPPRIIGF-TENPPAGYSLKD--LTPGGSYQVQLFSV 165 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~--~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~~--L~p~~~Y~v~v~a~ 165 (361)
.+|.++.+....-. ..|+|+++... ....|.|+|+..+...|.....+ ..... .+.|+. |.+...|.++|+|.
T Consensus 9 p~P~nv~~~s~n~~-~iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~-~Cdlt~~~~~~~~~Y~~RV~A~ 86 (211)
T 3g9v_A 9 LKPQRVQFQSRNFH-NILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQEL-SCDLTSETSDIQEPYYGRVRAA 86 (211)
T ss_dssp CCCEEEEEEEETTE-EEEEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEECCS-EEECTGGGCSTTSCEEEEEEEE
T ss_pred CCCceeEEEEEcCc-eEEEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCCCC-EECCCCcccccCccEEEEEEEE
Confidence 45899999775554 45999997632 26789999998754445422122 12334 888864 57899999999999
Q ss_pred eCCCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCC-----CCc--------ceEEEEEEeCCCCCCce
Q psy4956 166 YDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYP-----ASI--------YTHYKVSIDPPDAPESV 228 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~-----~~~--------~~~y~v~~~~~~~~~~~ 228 (361)
.+++.|.+.....|. +.+.||. +.+.... .+|.|.|++|.. .|. ...|.|.|...+.....
T Consensus 87 ~~~~~S~ws~~~~f~~~~~t~i~PP~-v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~~ 164 (211)
T 3g9v_A 87 SAGSYSEWSMTPRFTPWWETKIDPPV-MNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQ 164 (211)
T ss_dssp ETTEECCCEECCCBCHHHHCBCCCCE-EECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------CE
T ss_pred CCCCcCCCEecCcccccccCccCCCE-EEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccEE
Confidence 988887654343332 3355664 7776554 489999988753 121 35699999876544332
Q ss_pred eEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 229 LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
...... ...+.|.+|.|++.|.|+|+|...
T Consensus 165 ~~~~~~-----~~~~~i~~L~p~t~Ycv~V~a~~~ 194 (211)
T 3g9v_A 165 KVYEGA-----HRAVEIEALTPHSSYCVVAEIYQP 194 (211)
T ss_dssp EEEEES-----SCCCC----------CEEEEEEET
T ss_pred EEEecC-----CcEEEEecCCCCCeEEEEEEEEeC
Confidence 222222 367889999999999999999863
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=7.5e-13 Score=92.49 Aligned_cols=92 Identities=21% Similarity=0.283 Sum_probs=75.6
Q ss_pred EecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 86 ITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 86 ~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
+.+.|.+|.+|.+...+.+++.|+|++|. +.+.+|+|.|+..++ ..+...+....+ ++.|.+|.|++.|.|+|+|.
T Consensus 4 ~~t~p~~P~~l~v~~~~~~sv~lsW~~p~-~~i~~Y~i~y~~~~~--~~~~~~~~~~~t-s~~l~~L~p~t~Y~~~V~A~ 79 (105)
T 2cum_A 4 GSSGLEAPRDLEAKEVTPRTALLTWTEPP-VRPAGYLLSFHTPGG--QTQEILLPGGIT-SHQLLGLFPSTSYNARLQAM 79 (105)
T ss_dssp CCTTCCCCEEEEEESCCSSCEEEEEECCS-SCCSEEEEEEECTTS--CEEEEEECSSCS-EEEECSCCTTCEEEEEEEEE
T ss_pred cccCCCCCCceEEEeccCCEEEEEEcCCC-CccceEEEEEEeCCC--ceEEEEECCCcc-EEEECCCCCCCEEEEEEEEE
Confidence 45789999999999999999999999984 689999999987543 344455666666 99999999999999999999
Q ss_pred eCCCCcccceeeeeccC
Q psy4956 166 YDSKESVAYTSRNFTTK 182 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~ 182 (361)
++.+.+.+ ....++|.
T Consensus 80 ~~~g~s~~-~~~~~~T~ 95 (105)
T 2cum_A 80 WGQSLLPP-VSTSFTTG 95 (105)
T ss_dssp BTTBCCCC-EEEEEECC
T ss_pred eCCcccCC-EEEEEEeC
Confidence 99888876 44566665
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=5.9e-13 Score=92.13 Aligned_cols=86 Identities=20% Similarity=0.355 Sum_probs=71.5
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|.+|.++.+...+.+++.|+|.+|. +.+.+|.|+|+..+.........+....+ ++.|.+|.|++.|.|+|+|.+..
T Consensus 1 ~p~~P~~l~~~~~~~~sv~lsW~pP~-~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t-~~~i~~L~p~t~Y~~~V~A~n~~ 78 (100)
T 3b83_A 1 MLQPPFNIKVTNITLTTAVVTWQPPI-LPIEGILVTFGRKNDPSDETTVDLTSSIT-SLTLTNLEPNTTYEIRIVARNGQ 78 (100)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCS-SCCSEEEEEEEESSCTTTCEEEEECTTEE-EEEECSCCTTCEEEEEEEEEETT
T ss_pred CCccCCccEEEEecCCEEEEEEcCCc-ccCCEEEEEEEECCCCCCceEEEECCcce-EEEECCCCCCCEEEEEEEEEeCC
Confidence 47889999999999999999999985 57899999998765444455555666666 99999999999999999999999
Q ss_pred CCccccee
Q psy4956 169 KESVAYTS 176 (361)
Q Consensus 169 ~~s~~~~~ 176 (361)
|.|.+...
T Consensus 79 g~s~p~~~ 86 (100)
T 3b83_A 79 QYSPPVST 86 (100)
T ss_dssp EECCCEEE
T ss_pred CCCCCEEE
Confidence 98876443
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=8e-12 Score=98.50 Aligned_cols=165 Identities=16% Similarity=0.172 Sum_probs=113.7
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEEE-----CCCCCCCeEEeec-CCCCceEEEcC-CCCCcEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVIS-----LSEKTPPRIIGFT-ENPPAGYSLKD-LTPGGSYQV 160 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~~-----~~~~~~~~~~~~~-~~~~~~~~l~~-L~p~~~Y~v 160 (361)
...+|.|+.+....- ...|+|+++.. +....|.|+|+. .+...|.....+. .... .|.|.+ |..+..|.+
T Consensus 6 ~lp~P~nv~~~s~n~-~~iL~W~p~~~~~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~-~Cdlt~~~~~~~~Y~~ 83 (206)
T 4doh_B 6 ILPAPQQLSVLSTNM-KHLLMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGP-ECDVTDDITATVPYNL 83 (206)
T ss_dssp CCCCCCCCEEEEETT-EEEEECCCCCCSSSCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSS-EEECTTTCCSSSCEEE
T ss_pred cCCCCCeeEEEEeCC-EEEEEECCCCCCCCCEEEEEEEEEeccccCCCccceecccccCCCCC-EEcCCccccCCCCEEE
Confidence 355689999988655 48999999752 244689999984 3333454432222 2334 899985 777889999
Q ss_pred EEEEEeCCCCcccceeeee----ccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccC
Q psy4956 161 QLFSVYDSKESVAYTSRNF----TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGE 236 (361)
Q Consensus 161 ~v~a~~~~~~s~~~~~~~~----~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~ 236 (361)
||+|..+++.|.+.....+ .+.+.|| .+.+. ....+|.|.|.++ +.+..|.|.|...+..........
T Consensus 84 RVrA~~~~~~S~w~~~~~f~~~~~t~i~PP-~v~v~-~~~~~i~V~~~~p---~~~l~Y~v~y~~~~~~~~~~~~~~--- 155 (206)
T 4doh_B 84 RVRATLGSQTSAWSILKHPFNRQSTILTRP-GMEIT-KDGFHLVIELEDL---GPQFEFLVAYWRREPGAEEHVKMV--- 155 (206)
T ss_dssp EEEEEETTEECCCEECSSCBCGGGCBCCCC-CEEEE-EETTEEEEEECCC---CTTCEEEEEEEESSSSCCCEEEEE---
T ss_pred EEEEEcCCCccCccccccccchhhcccCCC-eEEEE-eCCCEEEEEecCC---CCcEEEEEEEEEcCCCceeEEeEE---
Confidence 9999998887765443333 2334455 47776 4678999999875 466799999987655443211110
Q ss_pred CCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 237 PPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 237 ~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
......+.|.+|.|++.|.|+|+|...
T Consensus 156 ~~~~~~~~i~~L~p~t~Ycv~Vra~~~ 182 (206)
T 4doh_B 156 RSGGIPVHLETMEPGAAYCVKAQTFVK 182 (206)
T ss_dssp CCSSSEEEEEECCSSSCEEEEEEEEEG
T ss_pred ccCCeEEEEeCCCCCCcEEEEEEEEec
Confidence 112367999999999999999999874
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.8e-12 Score=89.49 Aligned_cols=84 Identities=24% Similarity=0.511 Sum_probs=72.3
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+++|.++.+...+.+++.|+|.+| ++.+.+|.|+|+..++........+....+ .+.|.+|.|++.|.|+|+|.+..|
T Consensus 2 ~~~P~~l~v~~~~~~sv~l~W~~p-~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~~G 79 (98)
T 3teu_A 2 LDAPTDLQVTNVTDTSITVSWTPP-SATITGYRITYTPSNGPGEPKELTVPPSST-SVTITGLTPGVEYVVSVYALKDNQ 79 (98)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECC-SSCCSEEEEEEEETTSCSCCEEEEECTTCS-EEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCCCceEEEEecCCEEEEEEeCC-CCcccEEEEEEEECCCCCceEEEEcCCCcC-EEEecCCCCCCEEEEEEEEEeCCC
Confidence 578999999999999999999998 588999999999765545566666766676 999999999999999999999999
Q ss_pred Ccccce
Q psy4956 170 ESVAYT 175 (361)
Q Consensus 170 ~s~~~~ 175 (361)
.+.+..
T Consensus 80 ~s~p~~ 85 (98)
T 3teu_A 80 ESPPLV 85 (98)
T ss_dssp ECCCEE
T ss_pred CCCCeE
Confidence 887643
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-12 Score=94.14 Aligned_cols=95 Identities=12% Similarity=0.198 Sum_probs=75.6
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+...+.....+..... .+.|.+|.|++.|.|+|+|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A 94 (120)
T 1x5f_A 16 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEM-QVTIQNLMPATVYIFRVMA 94 (120)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEECSSTTCS-EEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEEeccCCcc-EEEeCCCCCCCEEEEEEEE
Confidence 357888999999999999999999985 357899999999875444443344444455 9999999999999999999
Q ss_pred EeCCCCcccceeeeeccCC
Q psy4956 165 VYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p 183 (361)
.+..|.+..+....++|.+
T Consensus 95 ~n~~G~g~~S~~~~~~T~~ 113 (120)
T 1x5f_A 95 QNKHGSGESSAPLRVETQP 113 (120)
T ss_dssp ECSSCEEEECCCEEEECCC
T ss_pred ECCCccCCCCCCEEEEeCC
Confidence 9999887766666677754
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-12 Score=103.87 Aligned_cols=169 Identities=15% Similarity=0.210 Sum_probs=111.8
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCC-cceEEEEEEeCCCCCCceeE--E-eeccCCCCCcEEEe--cCCCCCCeEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPAS-IYTHYKVSIDPPDAPESVLY--V-EKEGEPPGPAQAAF--KGLVPGRAYNI 256 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~-~~~~y~v~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~--~~L~p~t~Y~v 256 (361)
+..|.+|.+.......+.++|+++...+ ...+|.+.|...+.. .... . ...........+.| .++..++.|.|
T Consensus 21 ~~~P~nl~C~~~~~~~l~C~W~~~~~~~~~~~~y~l~y~~~~~~-~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~ 99 (227)
T 1eer_B 21 ARGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEP-WKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLEL 99 (227)
T ss_dssp HHSTTSCEEEBSSSSCCEEEEEESCCSSCCTTSEEEEEEETTSC-CEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEE
T ss_pred ccCCcCCeEECCCCCEEEEEecCCCCCCCCCccEEEEEEcCCCC-ceeccceeccCCCCCceEEEEeCCCcceeeEEEEE
Confidence 3468999999888889999999875332 567899999765322 1111 0 00000111234444 46788999999
Q ss_pred EEEEEeCCCCCCceEEEEe----cCCCCCccceEEeeecC-CceEEEEeeCCCCC--CCceeEEEEEEECCCCCCCCcee
Q psy4956 257 SVQTVSEDEISTPTTAQYR----TIPLRPLSFTYDKASIT-SNSLRVVWEPPKGF--SEFDKYQVSINVRRPGASSTPIT 329 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~~-~~si~l~W~~~~~~--~~~~~y~i~~~~~~~~~~~~~~~ 329 (361)
+|.|.++.+ .....+. ..|.+|.+|.+ .... .+.+.|+|++|... ..+..|+|+|+..+...+.. ..
T Consensus 100 ~V~a~~~~~---~~~~~~~~~~~v~p~pP~~l~~--~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~-~~ 173 (227)
T 1eer_B 100 RVTAASGAP---RYHRVIHINEVVLLDAPVGLVA--RLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ-RV 173 (227)
T ss_dssp EEEETTSCE---EEEEEECGGGSEECCCCEEEEE--EECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC-EE
T ss_pred EEEecCCCc---cEEEEEEeeeeEccCcCcceEE--EEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE-EE
Confidence 999854322 1122222 35889999999 5553 78999999998531 23678999999765422222 12
Q ss_pred ecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 330 KSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 330 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
......+++.+.+ |+||+.|.|+|+|...
T Consensus 174 ~~~~~~~~~~l~~-L~p~t~Y~vqVRa~~~ 202 (227)
T 1eer_B 174 EILEGRTECVLSN-LRGRTRYTFAVRARMA 202 (227)
T ss_dssp EECTTCCEEEECC-CCSSCEEEEEEEEEEC
T ss_pred EEecCceEEEEcc-cCCCCeEEEEEEEeEC
Confidence 2334567899986 9999999999999964
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=9.5e-13 Score=94.54 Aligned_cols=96 Identities=14% Similarity=0.279 Sum_probs=76.5
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
...|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+...+.....+..... .+.|.+|.|++.|.|+|+|
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A 93 (119)
T 2ed7_A 15 SVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSL-QLTVGNLKPEAMYTFRVVA 93 (119)
T ss_dssp SSSCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEECCCTTCC-EEEECSCCSSSEEEECCEE
T ss_pred CCCCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeEeecCCce-EEEeCCCCCCCEEEEEEEE
Confidence 3468889999999999999999999986 456899999998875544433333334455 9999999999999999999
Q ss_pred EeCCCCcccceeeeeccCC
Q psy4956 165 VYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p 183 (361)
.+..|.+.++....++|.+
T Consensus 94 ~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ed7_A 94 YNEWGPGESSQPIKVATQP 112 (119)
T ss_dssp EESSCBCSCCCCEEEECCC
T ss_pred EcCCccCCCcCCEEEEeCC
Confidence 9999888776666666664
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-12 Score=92.39 Aligned_cols=94 Identities=18% Similarity=0.238 Sum_probs=73.4
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|+|.|+..+.........+....+ .+.|.+|.|++.|.|+|+|.+
T Consensus 7 ~P~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 85 (109)
T 2e7h_A 7 GPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTSEN-RAELRGLKRGASYLVQVRARS 85 (109)
T ss_dssp SSCCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEESSS-EEEEESCCTTSCEEEEEEEEC
T ss_pred CCCCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEccCCC-EEEECCCCCCCeEEEEEEEEe
Confidence 57778999999999999999999986 466899999998865222211112233445 899999999999999999999
Q ss_pred CCCCcccceeeeeccCC
Q psy4956 167 DSKESVAYTSRNFTTKP 183 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p 183 (361)
..|.+..+....++|.+
T Consensus 86 ~~G~g~~S~~~~~~T~~ 102 (109)
T 2e7h_A 86 EAGYGPFGQEHHSQTQL 102 (109)
T ss_dssp SSCBCCCCSCEECCCCC
T ss_pred CCccCCCCCCEEEEcCC
Confidence 99888766666777764
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=8.3e-13 Score=95.58 Aligned_cols=112 Identities=20% Similarity=0.255 Sum_probs=82.5
Q ss_pred EEEEecCCcCccceeeEEEecC---CC-CCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEee
Q psy4956 68 YLYYTNSTVHDWLTWTASITTP---PD-PPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGF 139 (361)
Q Consensus 68 ~V~a~~~~~~~~~~~~~~~~t~---~~-~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~ 139 (361)
+|+|.|..|.+..+..+.+.+. |. +|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+...+.. .+
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~--~~ 80 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEME--TL 80 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEE--EE
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceE--Ee
Confidence 3566676644433334444443 44 67799999999999999999985 456899999999875543322 35
Q ss_pred cCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccC
Q psy4956 140 TENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 140 ~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~ 182 (361)
..... .+.|.+|.|++.|.|+|+|.+..|.+..+....++|.
T Consensus 81 ~~~~~-~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 122 (124)
T 2ed9_A 81 EPNNL-WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP 122 (124)
T ss_dssp CSSCS-EEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECC
T ss_pred cCCcC-EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECC
Confidence 55566 9999999999999999999999988876665666654
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-12 Score=89.26 Aligned_cols=83 Identities=19% Similarity=0.390 Sum_probs=70.6
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~ 170 (361)
.+|.++.+...+.+++.|+|++|. +.+.+|.|.|+..+.........+....+ ++.|.+|.|++.|.|+|+|.+..+.
T Consensus 3 p~P~~l~v~~~t~~Sv~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t-~~~l~gL~P~t~Y~~~V~A~~~~g~ 80 (98)
T 3tes_A 3 PAPKNLVVSEVTEDSLRLSWTAPD-AAFDSFMIQYQESEKVGEAINLTVPGSER-SYDLTGLKPGTEYTVSIYGVKGGHR 80 (98)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCT-TSCSEEEEEEEETTBCSCCEEEEEETTCS-EEEECSCCTTCEEEEEEEEEETTEE
T ss_pred CCCCceEEEecCCCeEEEEecCCc-CccceEEEEEEECCCCCceEEEEcCCCcC-EEEECCCCCCCEEEEEEEEEeCCcc
Confidence 568899999999999999999985 68899999999875434456667777777 9999999999999999999999998
Q ss_pred cccce
Q psy4956 171 SVAYT 175 (361)
Q Consensus 171 s~~~~ 175 (361)
|.+..
T Consensus 81 S~p~~ 85 (98)
T 3tes_A 81 SNPLS 85 (98)
T ss_dssp BCCEE
T ss_pred cCCEE
Confidence 87743
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.2e-12 Score=91.07 Aligned_cols=92 Identities=15% Similarity=0.241 Sum_probs=74.1
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCC-CCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK-TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
.+|.++++...+.+++.|+|++|..+.+.+|+|+|+..+.. .......+..... .+.|.+|.|++.|.|+|+|.+..|
T Consensus 20 ~~P~~l~~~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~~G 98 (119)
T 2ee2_A 20 EAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEY-SARLENLLPDTQYFIEVGACNSAG 98 (119)
T ss_dssp CCCCSCEEEEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEEEEEETTCS-EEEECSCCTTCEEEEEEEEECSSS
T ss_pred CCCCcEEEEEccCCEEEEEecCCCCCccceEEEEEEECCCcccCcEEEEcCCCEe-EEEECCCCCCCEEEEEEEEEcCCc
Confidence 35779999999999999999998667789999999886532 2234455556666 999999999999999999999998
Q ss_pred CcccceeeeeccCC
Q psy4956 170 ESVAYTSRNFTTKP 183 (361)
Q Consensus 170 ~s~~~~~~~~~t~p 183 (361)
.+..+....++|..
T Consensus 99 ~g~~S~~~~~~T~~ 112 (119)
T 2ee2_A 99 CGPPSDMIEAFTKK 112 (119)
T ss_dssp CCCCCCCEEEECCC
T ss_pred cCCCCCCEEEECCC
Confidence 88766666677764
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-12 Score=93.85 Aligned_cols=97 Identities=16% Similarity=0.234 Sum_probs=72.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+...+........... .+.|.+|.|++.|.|+|+|.+.
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~ 95 (118)
T 2yrz_A 17 VPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQT-SVVVEDLLPNHSYVFRVRAQSQ 95 (118)
T ss_dssp CCCCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEEESCTTCC-EEEEESCCTTCEEEEEEEEEES
T ss_pred CCCCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEEcCCCCcC-EEEeCCCCCCCEEEEEEEEEcC
Confidence 57888999998889999999999987 346899999998865433322222234455 9999999999999999999999
Q ss_pred CCCcccce-eeeeccCCCCC
Q psy4956 168 SKESVAYT-SRNFTTKPNTP 186 (361)
Q Consensus 168 ~~~s~~~~-~~~~~t~p~~p 186 (361)
.|.+.++. .....+.+.+|
T Consensus 96 ~G~g~~S~~~~~~~t~~~~p 115 (118)
T 2yrz_A 96 EGWGREREGVITIESQVSGP 115 (118)
T ss_dssp SCEEEEEEEEEECCCSCCCC
T ss_pred CcCCCCcCCceEeCCCCCCC
Confidence 99887654 33344444333
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.4e-12 Score=102.06 Aligned_cols=163 Identities=10% Similarity=0.086 Sum_probs=106.1
Q ss_pred eEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEe-------ecCccceEEe--cCCCCCceEEEEEEEecCCcCccce
Q psy4956 11 ANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYV-------SRDIKDNIEF--SEGLPGTKYDFYLYYTNSTVHDWLT 81 (361)
Q Consensus 11 ~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~i--~~L~p~t~Y~i~V~a~~~~~~~~~~ 81 (361)
....|+.+....+...+|.|.|+.. |.. ..... .......+.| .++..++.|.|.|.|.++.+ .
T Consensus 37 l~C~W~~~~~~~~~~~~y~l~y~~~-~~~--~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~V~a~~~~~----~ 109 (227)
T 1eer_B 37 LVCFWEEAASAGVGPGQYSFSYQLE-DEP--WKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAP----R 109 (227)
T ss_dssp CEEEEEESCCSSCCTTSEEEEEEET-TSC--CEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEEEEETTSCE----E
T ss_pred EEEEecCCCCCCCCCccEEEEEEcC-CCC--ceeccceeccCCCCCceEEEEeCCCcceeeEEEEEEEEecCCCc----c
Confidence 3445555555444678999999874 322 11111 0111234444 47788999999999865442 1
Q ss_pred eeEEEe----cCCCCCCccEEEEEe-CCEEEEEeeCCCCC---CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCC
Q psy4956 82 WTASIT----TPPDPPTNLSVNVRS-GKTAQIFWSPPISG---KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLT 153 (361)
Q Consensus 82 ~~~~~~----t~~~~p~~l~~~~~~-~~~v~l~W~~p~~~---~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 153 (361)
....+. ..|+||.++.+...+ ...+.|+|++|... ....|+|.|+..+...+.....+....+ .+.|.+|.
T Consensus 110 ~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~-~~~l~~L~ 188 (227)
T 1eer_B 110 YHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRT-ECVLSNLR 188 (227)
T ss_dssp EEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEECTTCC-EEEECCCC
T ss_pred EEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEEecCce-EEEEcccC
Confidence 122232 358999999988764 78999999998632 2568999998765444554334444556 89999999
Q ss_pred CCcEEEEEEEEEeCC-----CCcccceeeeecc
Q psy4956 154 PGGSYQVQLFSVYDS-----KESVAYTSRNFTT 181 (361)
Q Consensus 154 p~~~Y~v~v~a~~~~-----~~s~~~~~~~~~t 181 (361)
|++.|.|+|+|...+ ..|..+....+.|
T Consensus 189 p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 189 GRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp SSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred CCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 999999999999752 2344444444554
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=8.5e-13 Score=94.52 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=69.7
Q ss_pred CccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCc
Q psy4956 77 HDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGG 156 (361)
Q Consensus 77 ~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~ 156 (361)
..+.+......+++.+|.+|.+...+.+++.|+|.+|. +.+.+|+|.|+..++........+....+ .+.|.+|.|++
T Consensus 16 ~~s~p~~~~~~tp~~~P~~l~v~~~t~~Si~lsW~~p~-~~i~~Y~V~y~~~~~~~~~~~~~v~~~~t-~~~l~gL~P~t 93 (121)
T 2ocf_D 16 DDKGENLYFQGSVSDVPTKLEVVAATPTSLLISWDAPA-VTVRYYRITYGETGGNSPVQEFTVPGSKS-TATISGLKPGV 93 (121)
T ss_dssp -------------CCSCEEEEEEEECSSCEEEEEECCS-SCCCEEEEEEEETTTCSCBEEEEEETTCC-EEEECCCCTTC
T ss_pred CccCCEEeeccCCCCCCCccEEEecCCCEEEEEEcCCC-CCCcEEEEEEEECCCCCccEEEEeCCCcC-EEEeCCCCCCC
Confidence 44445555666778999999999999999999999985 57899999999876544455666776777 99999999999
Q ss_pred EEEEEEEEEeCCCCcc
Q psy4956 157 SYQVQLFSVYDSKESV 172 (361)
Q Consensus 157 ~Y~v~v~a~~~~~~s~ 172 (361)
.|.|+|+|.+..|.+.
T Consensus 94 ~Y~~~V~A~~~~G~g~ 109 (121)
T 2ocf_D 94 DYTITVYAVTGLRLML 109 (121)
T ss_dssp EEEEEEEEECCHHHHH
T ss_pred EEEEEEEEEeCCCccC
Confidence 9999999999887754
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=92.59 Aligned_cols=94 Identities=14% Similarity=0.245 Sum_probs=74.1
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|.++++...+ +++.|+|+++.. .+.+.+|.|.|............. ...+.+.|.+|.|++.|.|+|+|
T Consensus 17 ~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~~~~~~~-----~~~~~~~l~~L~p~t~Y~~~V~A 90 (116)
T 2edb_A 17 VPDQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVD-----SKQRYYSIERLESSSHYVISLKA 90 (116)
T ss_dssp CCCCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESSTTSEEEEEE-----TTCCEEEECSCCSSSBEEEEEEE
T ss_pred CCCCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCCCeEEEEeC-----CCeeEEEeCCCCCCCEEEEEEEE
Confidence 47789999999888 999999998743 377899999998633222222222 33588999999999999999999
Q ss_pred EeCCCCCCceEEEEecCCCCC
Q psy4956 261 VSEDEISTPTTAQYRTIPLRP 281 (361)
Q Consensus 261 ~~~~~~s~~~~~~~~t~~~~p 281 (361)
++..|.+.+....+.|.+.+|
T Consensus 91 ~n~~G~g~~~~~~~~T~~~~P 111 (116)
T 2edb_A 91 FNNAGEGVPLYESATTRSITS 111 (116)
T ss_dssp EETTEECSCEEECCBCCCSSS
T ss_pred EeCCccCCCCcceeecccCCC
Confidence 999999988887777776655
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.2e-12 Score=92.54 Aligned_cols=77 Identities=25% Similarity=0.458 Sum_probs=62.7
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCC--ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|++|.+|.+...+.+++.|+|.++ .+.+.+|.|.|...++.. ....+ +...+++.|.+|.|++.|.|+|+
T Consensus 3 vP~~P~~L~v~~~t~~Sv~lsW~~p--~g~i~~Y~v~y~~~~~~~~~~~~~v-----~~~~ts~~l~gL~P~T~Y~v~V~ 75 (114)
T 3qwq_B 3 VSDVPRDLEVVAATPTSLLISWDSG--RGSYQYYRITYGETGGNSPVQEFTV-----PGPVHTATISGLKPGVDYTITVY 75 (114)
T ss_dssp --CCCEEEEEEEEETTEEEEEEECC--SCCCSEEEEEEEESSCSSCCEEEEE-----ETTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCCCceEEEecCCCEEEEEEcCC--cCcccEEEEEEEECCCCCccEEEEe-----CCCcCEEEeCCCCCCCEEEEEEE
Confidence 3789999999999999999999987 478999999998765542 22222 23458999999999999999999
Q ss_pred EEeCCC
Q psy4956 260 TVSEDE 265 (361)
Q Consensus 260 a~~~~~ 265 (361)
|.+..|
T Consensus 76 A~~~~G 81 (114)
T 3qwq_B 76 AVTDHK 81 (114)
T ss_dssp EEEEEE
T ss_pred EEECCc
Confidence 999888
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=99.42 E-value=2.6e-12 Score=89.13 Aligned_cols=91 Identities=13% Similarity=0.070 Sum_probs=72.6
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCC--CCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEK--TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
..+|.++.+...+.+++.|+|++|. ++.+.+|+|.|+..+.. .......+....+ ++.|.+|.|++.|.|+|+
T Consensus 5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~-~~~l~~L~p~t~Y~v~V~ 83 (102)
T 3n1f_C 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQ-WHMIGHLQPETSYDIKMQ 83 (102)
T ss_dssp CSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCS-EEEECSCCTTCEEEEEEE
T ss_pred CCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCce-EEECCCCCCCCEEEEEEE
Confidence 4578899999999999999999875 57899999999986543 1334455666666 899999999999999999
Q ss_pred EEeCCCCcccceeeeecc
Q psy4956 164 SVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t 181 (361)
|.+..|.+..+....++|
T Consensus 84 A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 84 CFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEETTEECCCCCCEEEEC
T ss_pred EECCCcCCCCCCCEEeec
Confidence 999998887655555554
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.6e-14 Score=97.16 Aligned_cols=98 Identities=23% Similarity=0.424 Sum_probs=78.0
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.+.|.+|.+|++...+.+++.|+|++| ++.+.+|+|+|+..+.....+...+....+ .+.|.+|.|++.|.|+|+|.+
T Consensus 5 ~~~p~~P~~l~v~~~t~~si~lsW~~p-~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~-~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 5 SSGRSPPSNLALASETPDSLQVSWTPP-LGRVLHYWLTYAPASGLGPEKSVSVPGARS-HVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp CTTCCCCEEEEEEEEETTEEEEEEECC-SSCCSBBCBBCCCTTSCSCCCCBCCBTTSS-EEEECSCCSSCCCBCBBCBBC
T ss_pred ccCCCCCCceEEEeCCCCEEEEEEeCC-CCcceEEEEEEEECCCCCccEEEEeCCCcC-EEEeCCCCCCCEEEEEEEEEe
Confidence 356889999999999999999999998 588999999997754433333455566666 999999999999999999999
Q ss_pred CCCCcccceeeeeccC-CCCCc
Q psy4956 167 DSKESVAYTSRNFTTK-PNTPG 187 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~-p~~p~ 187 (361)
..|.+.+.. ....|. |..|.
T Consensus 83 ~~g~g~~s~-~~~~T~~p~~P~ 103 (105)
T 2ekj_A 83 AAGRSEAVS-ATGQTACPSGPS 103 (105)
T ss_dssp SSCBCCCBC-CBCCCCCCCCCC
T ss_pred CCccCCccc-cEEEccCCCCCC
Confidence 999887643 445565 65553
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=4.1e-12 Score=88.54 Aligned_cols=91 Identities=24% Similarity=0.407 Sum_probs=71.8
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCC--eEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPP--RIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.+.+.+|.+|++...+.+++.|+|.+|. + +.+|+|.|+..+...+. ....+ ... ++.|.+|.|++.|.|+|+|
T Consensus 6 ~~~~~~P~~l~~~~~~~~sv~lsW~~p~-~-~~~Y~v~y~~~~~~~~~~~~~~~~--~~~-~~~l~~L~p~t~Y~~~V~A 80 (104)
T 2dkm_A 6 SGPLPPPRALTLAAVTPRTVHLTWQPSA-G-ATHYLVRCSPASPKGEEEEREVQV--GRP-EVLLDGLEPGRDYEVSVQS 80 (104)
T ss_dssp SCSCCCCCCCEEEEECSSEEEEECCCCS-S-CSEEEEEEEESSSCCSSCCEEEEE--SSS-EEEEESCCTTCCEEEEEEE
T ss_pred eCCCCCCceeEEEecCCCEEEEEEeCCC-C-CCeEEEEEEECCCCCCcceEEEec--CCC-EEEECCCCCCCEEEEEEEE
Confidence 3568899999999999999999999975 4 48999999886543332 33333 334 8999999999999999999
Q ss_pred EeCCCCcccceeeeeccCC
Q psy4956 165 VYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p 183 (361)
.++.+.+.+ ....++|.|
T Consensus 81 ~~~~~~s~p-~~~~~~T~p 98 (104)
T 2dkm_A 81 LRGPEGSEA-RGIRARTPT 98 (104)
T ss_dssp ECSSSBCCC-EEEECCCCC
T ss_pred ECCCCCCCC-EEEEEEcCC
Confidence 999888876 445566664
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-12 Score=89.04 Aligned_cols=80 Identities=25% Similarity=0.374 Sum_probs=64.5
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCC--ceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
|.+.+|.+|.+...+.+++.|+|+++ .+.+.+|.|.|...++.. ....+ +...+++.|.+|.|++.|.|+|
T Consensus 3 t~~~~P~~l~v~~~t~~Si~lsW~~p--~~~i~~Y~v~y~~~~~~~~~~~~~v-----~~~~t~~~l~~L~p~t~Y~v~V 75 (97)
T 3qht_C 3 SVSSVPTKLEVVAATPTSLLISWDAS--SSSVSYYRITYGETGGNSPVQEFTV-----PGSSSTATISGLSPGVDYTITV 75 (97)
T ss_dssp --CCSSSSCEEEEEETTEEEEECCCC--CSSCCEEEEEEEESSSCSCCEEEEE-----ETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEEeCC--CCCCCEEEEEEEECCCCCccEEEEe-----CCCcCEEEeCCCCCCCEEEEEE
Confidence 45789999999999999999999987 478999999998765542 22222 2335899999999999999999
Q ss_pred EEEeCCCCC
Q psy4956 259 QTVSEDEIS 267 (361)
Q Consensus 259 ~a~~~~~~s 267 (361)
.|.+..|.+
T Consensus 76 ~A~~~~G~g 84 (97)
T 3qht_C 76 YAYYSYYDL 84 (97)
T ss_dssp EEEEEETTE
T ss_pred EEEeCCccC
Confidence 999988866
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.9e-12 Score=88.52 Aligned_cols=90 Identities=21% Similarity=0.300 Sum_probs=68.8
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
.++|.+|++...+.+++.|+|.+|. +.+.+|+|+|+..++........+....+ ++.|.+|.|++.|.|+|+|.+..+
T Consensus 2 l~~P~~l~~~~~~~~si~lsW~~p~-~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A~~~~g 79 (94)
T 1j8k_A 2 IDRPKGLAFTDVDVDSIKIAWESPQ-GQVSRYRVTYSSPEDGIHELFPAPDGEED-TAELQGLRPGSEYTVSVVALHDDM 79 (94)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCCS-SCCSCEEEEEEETTTEEEEECCCCCSSCC-EEEECSCCCCSEEEEEEEECSSSC
T ss_pred CCCCCccEEEeecCCEEEEEEcCCC-CCcceEEEEEEeCCCCCceEEecCCCCcc-EEEeCCCCCCCEEEEEEEEEcCCC
Confidence 4689999999999999999999985 78999999998754311111112234455 999999999999999999999999
Q ss_pred CcccceeeeeccC
Q psy4956 170 ESVAYTSRNFTTK 182 (361)
Q Consensus 170 ~s~~~~~~~~~t~ 182 (361)
.+.+. ...++|.
T Consensus 80 ~s~p~-~~~~~T~ 91 (94)
T 1j8k_A 80 ESQPL-IGTQSTA 91 (94)
T ss_dssp CCCCE-EEEEECC
T ss_pred cCCCE-EeEEEec
Confidence 88763 3444443
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-12 Score=94.94 Aligned_cols=102 Identities=18% Similarity=0.290 Sum_probs=76.3
Q ss_pred CCCccEEEEEeCCEEEEEeeCC--C--CCCcccEEEEEEECCCCCCCe-EE-eecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPP--I--SGKYSGFKLKVISLSEKTPPR-II-GFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p--~--~~~~~~y~v~~~~~~~~~~~~-~~-~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
+|.++.+...+.+++.|+|++| . ++.+.+|+|.|+..+...... .. .+....+ .+.|.+|.|++.|.|+|+|.
T Consensus 21 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~ 99 (134)
T 2edx_A 21 PPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHS-SWDLVGLEKWTEYRVWVRAH 99 (134)
T ss_dssp CSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCS-EEEEESCCTTCEEEEEEEEE
T ss_pred CCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCcc-EEEeCCCCCCCEEEEEEEEE
Confidence 6778888888899999999998 3 567899999998865433222 22 2245555 99999999999999999999
Q ss_pred eCCCCcccceeeeeccC---C-CCCcceEEEec
Q psy4956 166 YDSKESVAYTSRNFTTK---P-NTPGKFIVWFR 194 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~---p-~~p~~l~~~~~ 194 (361)
+..|.+..+....++|. | .+|.++.+...
T Consensus 100 n~~G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~ 132 (134)
T 2edx_A 100 TDVGPGPESSPVLVRTDEDVPSGPPRKVESGPS 132 (134)
T ss_dssp ETTBCCCCCCCEEEECCCCSSCCCCCCCCCCCC
T ss_pred cCCCcCCCCCCEEeecCCCCCCCCCceeEEEEc
Confidence 99888766555555554 4 46777766543
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-12 Score=94.92 Aligned_cols=118 Identities=17% Similarity=0.140 Sum_probs=84.4
Q ss_pred EEEEeCCCCcccce-eeeecc---CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccC
Q psy4956 162 LFSVYDSKESVAYT-SRNFTT---KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGE 236 (361)
Q Consensus 162 v~a~~~~~~s~~~~-~~~~~t---~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~ 236 (361)
|.|.+..|.+..+. ...++| .|.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|...+........ ...
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~--~~~ 80 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV--EVL 80 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE--EEE
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCCCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEE--EEe
Confidence 55667777765443 234444 377889999999999999999987743 37789999999876543211100 011
Q ss_pred CCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEE-EEecCCCCC
Q psy4956 237 PPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTA-QYRTIPLRP 281 (361)
Q Consensus 237 ~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~-~~~t~~~~p 281 (361)
....+.+.|.+|.|++.|.|+|+|.+..|.+..... .+.|.+..|
T Consensus 81 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 126 (130)
T 1wfo_A 81 APSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSG 126 (130)
T ss_dssp CTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCC
T ss_pred CCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCC
Confidence 334589999999999999999999999998876654 566665543
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-12 Score=92.17 Aligned_cols=98 Identities=15% Similarity=0.201 Sum_probs=74.5
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCC----cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGK----YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~----~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
.++.+|.++++...+.++|.|+|.+|. ++. +.+|.|.|+.... .......+....+ .+.|.+|+|++.|.|+
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~-~~~~~~~~~~~~~-~~~i~gL~P~T~Y~f~ 84 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIP-ANTKYKNANATTL-SYLVTGLKPNTLYEFS 84 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSS-SSCCCEECCBCSS-EEEEESCCTTCEECCE
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCC-CCeEEEEEecCcC-EEEeCCCCCCcEEEEE
Confidence 467889999999999999999999876 222 3499999987322 1222223334455 9999999999999999
Q ss_pred EEEEeCCCCcccceeeeeccCCC-CCc
Q psy4956 162 LFSVYDSKESVAYTSRNFTTKPN-TPG 187 (361)
Q Consensus 162 v~a~~~~~~s~~~~~~~~~t~p~-~p~ 187 (361)
|+|.+..|.+..+....++|.+. +|.
T Consensus 85 V~A~~~~G~g~~S~~v~~~T~~~~~Ps 111 (113)
T 1x5j_A 85 VMVTKGRRSSTWSMTAHGTTFELSGPS 111 (113)
T ss_dssp EEEECSSCBCCCCCCCCEECCCSSCCC
T ss_pred EEEecCCccCCCcccEEeeccCCCCCC
Confidence 99999888887766777777766 553
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.9e-12 Score=86.47 Aligned_cols=96 Identities=22% Similarity=0.212 Sum_probs=76.9
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCC-CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSY-PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~-~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
.+.|.+|.+|++...+.+++.|+|.++. +.+.+..|+|.|..... ...... ..+.+.|.||+|++.|.|+|
T Consensus 5 ~~~Ps~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~---~~~~~~-----~~t~~~i~gL~PgT~Y~~~V 76 (104)
T 2dle_A 5 SSGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD---SSNLNV-----SEPRAVIPGLRSSTFYNITV 76 (104)
T ss_dssp SSSCCBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC---EEEEEE-----SSSEEECCSCCSSCEEEEEE
T ss_pred cCCCCCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC---eEEEcC-----CCCEEEECCCCCCCEEEEEE
Confidence 3568889999999999999999998653 33555789999986532 222222 24899999999999999999
Q ss_pred EEEeCCCCCCceEEEEecCCCCCcc
Q psy4956 259 QTVSEDEISTPTTAQYRTIPLRPLS 283 (361)
Q Consensus 259 ~a~~~~~~s~~~~~~~~t~~~~p~~ 283 (361)
+|..+...+.+....+.|.|+++.+
T Consensus 77 ~A~~~~~~~~p~~~~~~T~p~p~~~ 101 (104)
T 2dle_A 77 CPVLGDIEGTPGFLQVHTPPVPSGP 101 (104)
T ss_dssp EEESSSCCCBCEEEEEECCCCSCCC
T ss_pred EEEECCcccCCeeEEEEccCCCCCC
Confidence 9999888889999999999888754
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.6e-12 Score=87.18 Aligned_cols=90 Identities=20% Similarity=0.257 Sum_probs=71.0
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
|.+|.++.+...+.+++.|+|.++. +.+.+|.|.|+..+......... .....+.+.+.+|.|++.|.|+|+|.+
T Consensus 2 p~~P~~l~~~~~~~~sv~lsW~pP~--~~i~~Y~v~y~~~~~~~~~~~~~---~~~~~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 2 LQPPFNIKVTNITLTTAVVTWQPPI--LPIEGILVTFGRKNDPSDETTVD---LTSSITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCS--SCCSEEEEEEEESSCTTTCEEEE---ECTTEEEEEECSCCTTCEEEEEEEEEE
T ss_pred CccCCccEEEEecCCEEEEEEcCCc--ccCCEEEEEEEECCCCCCceEEE---ECCcceEEEECCCCCCCEEEEEEEEEe
Confidence 6789999999999999999999873 46899999998654322111111 133458899999999999999999999
Q ss_pred CCCCCCceEEEEecC
Q psy4956 263 EDEISTPTTAQYRTI 277 (361)
Q Consensus 263 ~~~~s~~~~~~~~t~ 277 (361)
..|.|.+......+.
T Consensus 77 ~~g~s~p~~~~~~~~ 91 (100)
T 3b83_A 77 GQQYSPPVSTTFTTG 91 (100)
T ss_dssp TTEECCCEEEEEECC
T ss_pred CCCCCCCEEEEEEEE
Confidence 999998888766554
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.2e-12 Score=94.70 Aligned_cols=112 Identities=19% Similarity=0.227 Sum_probs=82.9
Q ss_pred EEEEEeCCCCcccceeeeeccC---CC-CCcceEEEeccCCeEEEEeecCCC---CCcceEEEEEEeCCCCCCceeEEee
Q psy4956 161 QLFSVYDSKESVAYTSRNFTTK---PN-TPGKFIVWFRNETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPESVLYVEK 233 (361)
Q Consensus 161 ~v~a~~~~~~s~~~~~~~~~t~---p~-~p~~l~~~~~~~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~~~~~~~ 233 (361)
+|.|.+..|.+..+....+.|. |. +|.++.+...+.+++.|+|+++.. .+.+.+|.|.|+..+........
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~-- 80 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETL-- 80 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEEE--
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEEe--
Confidence 4567777777765444455444 54 678999998999999999988754 47799999999887654433322
Q ss_pred ccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE-EEEecC
Q psy4956 234 EGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT-AQYRTI 277 (361)
Q Consensus 234 ~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~-~~~~t~ 277 (361)
....+.+.|.+|.|++.|.|+|+|.+..|.+..+. +.+.|.
T Consensus 81 ---~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 122 (124)
T 2ed9_A 81 ---EPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETP 122 (124)
T ss_dssp ---CSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECC
T ss_pred ---cCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECC
Confidence 33458899999999999999999999988776544 344443
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-12 Score=92.01 Aligned_cols=94 Identities=16% Similarity=0.105 Sum_probs=73.8
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCC--CCCeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEK--TPPRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
++.+|.++.+...+.+++.|+|++|. ++.+.+|+|.|+..+.. .......+..... .+.|.+|.|++.|.|+|
T Consensus 8 P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V 86 (114)
T 1x4y_A 8 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRY-WHSISHLQPETSYDIKM 86 (114)
T ss_dssp CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCC-EEEECSCCTTCEEEEEE
T ss_pred CCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEe-EEEcCCCCCCCEEEEEE
Confidence 45778889998889999999999984 56799999999875443 1222234445556 89999999999999999
Q ss_pred EEEeCCCCcccceeeeeccCC
Q psy4956 163 FSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~p 183 (361)
+|.+..|.+..+....++|.+
T Consensus 87 ~A~n~~G~g~~S~~v~~~T~~ 107 (114)
T 1x4y_A 87 QCFNEGGESEFSNVMICETKA 107 (114)
T ss_dssp EEECTTCCCCCCCCEEEECCC
T ss_pred EEEcCCccCCCcCCEEEEeCC
Confidence 999999988776666777764
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.1e-12 Score=89.89 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=76.0
Q ss_pred CCCCCCccEEEEE--eCCEEEEEeeCCC--CCCcccEEEEEEECCCC--CCCeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNVR--SGKTAQIFWSPPI--SGKYSGFKLKVISLSEK--TPPRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~~--~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
++.+|.++.+... +.+++.|+|++|. ++.+.+|+|+|+..... .......+..... .+.|.+|.|++.|.|+|
T Consensus 8 P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V 86 (114)
T 2ede_A 8 PTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRL-THQIMDLNLDTMYYFRI 86 (114)
T ss_dssp CCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCC-EEEECSCCSSCEEEEEE
T ss_pred CCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCce-EEEEcCCCCCCEEEEEE
Confidence 3578889999887 7799999999987 46788999999874432 1224455566666 99999999999999999
Q ss_pred EEEeCCCCcccceeeeeccCCCCC
Q psy4956 163 FSVYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~p~~p 186 (361)
+|.+..|.+..+....++|.+.+|
T Consensus 87 ~A~n~~G~g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 87 QARNSKGVGPLSDPILFRTLKVSG 110 (114)
T ss_dssp EEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEeCCcCcCCcccEEEEecCCCC
Confidence 999999888776667777765443
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.6e-12 Score=89.81 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=73.5
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
..|.+|.++++...+ +++.|+|++|. ++.+.+|+|+|+... .+.....+....+ .+.|.+|.|++.|.|+|+|.
T Consensus 16 ~~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~--~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A~ 91 (116)
T 2edb_A 16 QVPDQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGS--PYAETVRVDSKQR-YYSIERLESSSHYVISLKAF 91 (116)
T ss_dssp SCCCCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESS--TTSEEEEEETTCC-EEEECSCCSSSBEEEEEEEE
T ss_pred CCCCCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCC--CCeEEEEeCCCee-EEEeCCCCCCCEEEEEEEEE
Confidence 357789999999888 99999999986 456899999998632 3445555666666 99999999999999999999
Q ss_pred eCCCCcccceeeeeccCCCC
Q psy4956 166 YDSKESVAYTSRNFTTKPNT 185 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~p~~ 185 (361)
+..|.+.+. .....|.+.+
T Consensus 92 n~~G~g~~~-~~~~~T~~~~ 110 (116)
T 2edb_A 92 NNAGEGVPL-YESATTRSIT 110 (116)
T ss_dssp ETTEECSCE-EECCBCCCSS
T ss_pred eCCccCCCC-cceeecccCC
Confidence 999888753 3455555433
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-12 Score=88.07 Aligned_cols=92 Identities=24% Similarity=0.380 Sum_probs=69.7
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCC--ceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.+.+.+|.+|.+...+.+++.|+|+++.. .+.+.+|.|.|...+... ....+ +...+++.|.+|.|++.|.|
T Consensus 5 ~t~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v-----~~~~ts~~l~~L~p~t~Y~~ 79 (103)
T 3t04_D 5 SSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTV-----PGYYSTATISGLKPGVDYTI 79 (103)
T ss_dssp SCCCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEE-----ETTCCEEEECSCCTTCCEEE
T ss_pred cccCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEc-----CCCcCEEEeCCCCCCCEEEE
Confidence 35678999999999999999999998742 278999999999764322 22222 23358999999999999999
Q ss_pred EEEEEeC--CC--CCCceEEEEec
Q psy4956 257 SVQTVSE--DE--ISTPTTAQYRT 276 (361)
Q Consensus 257 ~V~a~~~--~~--~s~~~~~~~~t 276 (361)
+|+|.+. .| .+.+..+.++|
T Consensus 80 ~V~A~~~~~~G~~~S~p~~~~~~t 103 (103)
T 3t04_D 80 TVYAYDTFFPGYEPNSPISINYRT 103 (103)
T ss_dssp EEEEESCCCTTCCCSCCEEEEECC
T ss_pred EEEEEeCCCCCCCCCCCEEEeecC
Confidence 9999976 55 44555555543
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=3.6e-12 Score=89.69 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=74.3
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+...+.. ..+..... .+.|.+|.|++.|.|+|+|.+
T Consensus 7 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~~~-~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2djs_A 7 GPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNS-SMARSQTN-TARIDGLRPGMVYVVQVRART 84 (108)
T ss_dssp CCCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTC-EEEEESSS-EEEEESCCTTCEEEEEEEEEE
T ss_pred CCCCCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcce-eEEecCcc-EEEEcCCCCCCEEEEEEEEEe
Confidence 57788999999999999999999986 466889999998875433322 23334455 999999999999999999999
Q ss_pred CCCCcccceeeeeccCC
Q psy4956 167 DSKESVAYTSRNFTTKP 183 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p 183 (361)
..|.+.++....++|.+
T Consensus 85 ~~G~g~~S~~~~~~T~~ 101 (108)
T 2djs_A 85 VAGYGKFSGKMCFQTLT 101 (108)
T ss_dssp SSCEEEECCCEEEECCC
T ss_pred CCEECCCCCCEEEEeCC
Confidence 99888766666677764
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.5e-11 Score=94.84 Aligned_cols=164 Identities=19% Similarity=0.214 Sum_probs=110.9
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeC-----CCCCCceeEEeeccCCCCCcEEEecC-CCCCCeEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-----PDAPESVLYVEKEGEPPGPAQAAFKG-LVPGRAYNI 256 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-L~p~t~Y~v 256 (361)
..+|.|+.+...+.. ..|.|+++.....-..|.|+|.. .+...+... .... .-..+.+.|.+ |..+..|.+
T Consensus 7 lp~P~nv~~~s~n~~-~iL~W~p~~~~~~~~~Y~V~y~~~~~~~~~~~~W~~~-~~C~-~i~~~~Cdlt~~~~~~~~Y~~ 83 (206)
T 4doh_B 7 LPAPQQLSVLSTNMK-HLLMWSPVIAPGETVYYSVEYQGEYESLYTSHIWIPS-SWCS-LTEGPECDVTDDITATVPYNL 83 (206)
T ss_dssp CCCCCCCEEEEETTE-EEEECCCCCCSSSCCEEEEEEEEHHHHHHSTTCCEEE-EEEE-EESSSEEECTTTCCSSSCEEE
T ss_pred CCCCCeeEEEEeCCE-EEEEECCCCCCCCCEEEEEEEEEeccccCCCccceec-cccc-CCCCCEEcCCccccCCCCEEE
Confidence 347999999876654 79999987433344689999983 233333321 1110 11237888884 777899999
Q ss_pred EEEEEeCCCCCCceEEE-E----ecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeec
Q psy4956 257 SVQTVSEDEISTPTTAQ-Y----RTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKS 331 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~~~-~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~ 331 (361)
+|+|..+.+.|..+... + .+.+.||. +.+ . ....+|.|.|.++ + .+..|+|.|.+.+.... ......
T Consensus 84 RVrA~~~~~~S~w~~~~~f~~~~~t~i~PP~-v~v--~-~~~~~i~V~~~~p-~--~~l~Y~v~y~~~~~~~~-~~~~~~ 155 (206)
T 4doh_B 84 RVRATLGSQTSAWSILKHPFNRQSTILTRPG-MEI--T-KDGFHLVIELEDL-G--PQFEFLVAYWRREPGAE-EHVKMV 155 (206)
T ss_dssp EEEEEETTEECCCEECSSCBCGGGCBCCCCC-EEE--E-EETTEEEEEECCC-C--TTCEEEEEEEESSSSCC-CEEEEE
T ss_pred EEEEEcCCCccCccccccccchhhcccCCCe-EEE--E-eCCCEEEEEecCC-C--CcEEEEEEEEEcCCCce-eEEeEE
Confidence 99999988776554421 1 23444554 677 4 4678999999987 3 56789999988765322 111112
Q ss_pred CCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 332 RDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 332 ~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
......+.+.+ |+|++.|-|+|+|..
T Consensus 156 ~~~~~~~~i~~-L~p~t~Ycv~Vra~~ 181 (206)
T 4doh_B 156 RSGGIPVHLET-MEPGAAYCVKAQTFV 181 (206)
T ss_dssp CCSSSEEEEEE-CCSSSCEEEEEEEEE
T ss_pred ccCCeEEEEeC-CCCCCcEEEEEEEEe
Confidence 23346799986 999999999999986
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.1e-11 Score=94.74 Aligned_cols=171 Identities=11% Similarity=0.039 Sum_probs=102.1
Q ss_pred CCCCccEEEEE-eCCEEEEEeeCCCCCCc-c-cEEEEEEECCCCCC-----------CeEEeecCCCCceEEEcCCCCCc
Q psy4956 91 DPPTNLSVNVR-SGKTAQIFWSPPISGKY-S-GFKLKVISLSEKTP-----------PRIIGFTENPPAGYSLKDLTPGG 156 (361)
Q Consensus 91 ~~p~~l~~~~~-~~~~v~l~W~~p~~~~~-~-~y~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~L~p~~ 156 (361)
+.|.||.-... .-..+..+|++.....+ . .|.+.|+....+.. ..+..-..... .+.+..|...+
T Consensus 2 ~~~~nlsC~~~~~~~~~~C~W~~g~~~~l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~-~C~~~~~~~~~ 80 (206)
T 3v6o_A 2 DVNINISCETDGYLTKMTCRWSTSTIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFY-ECIFQPIFLLS 80 (206)
T ss_dssp --CCCCEEEECTTSSCEEEEECCCC--------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCE-EEEECSCCTTS
T ss_pred CCCEEEEEEECCCCcEEEEEecCCCcCCcccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCc-eEEeCcHHhcc
Confidence 35677777665 34789999998654333 3 68888876431100 11111112223 78888888899
Q ss_pred EEEEEEEEEeCCCCcccceeeee----ccCCCCCcceEEEec-cCCeEEEEeecCCCCCcceEEEEEEeCCCC-CCceeE
Q psy4956 157 SYQVQLFSVYDSKESVAYTSRNF----TTKPNTPGKFIVWFR-NETTLLVLWQPSYPASIYTHYKVSIDPPDA-PESVLY 230 (361)
Q Consensus 157 ~Y~v~v~a~~~~~~s~~~~~~~~----~t~p~~p~~l~~~~~-~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~-~~~~~~ 230 (361)
.|.|+|.|.+..|.... ....+ ...|.||.++.+... ....+.|+|++|........|.|+|+..+. ..+...
T Consensus 81 ~Y~~~V~a~N~~G~~~s-~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~ 159 (206)
T 3v6o_A 81 GYTMWIRINHSLGSLDS-PPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMY 159 (206)
T ss_dssp CEEEEEEEC---CCEEC-CCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEE
T ss_pred cEEEEEEEEcCCccccC-CcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEE
Confidence 99999999997765432 11222 245889999998765 578999999876433335799999998653 333332
Q ss_pred EeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCC
Q psy4956 231 VEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEI 266 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~ 266 (361)
.. . ......+.+.+|.|++.|.|+|+|....+.
T Consensus 160 ~~-~--~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~ 192 (206)
T 3v6o_A 160 EV-Y--DAKSKSVSLPVPDLCAVYAVQVRCKRLDGL 192 (206)
T ss_dssp EE-C--C---CEEEECCSCTTSCEEEEEEEEETTSC
T ss_pred ec-c--cCcceeEEeecCCCCCEEEEEEEEecCCCC
Confidence 21 1 111246889999999999999999986443
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.2e-12 Score=88.59 Aligned_cols=97 Identities=15% Similarity=0.271 Sum_probs=75.3
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
..|.+|.++.+...+.+++.|+|+++.++.+.+|+|+|+............ ..... .+.|.+|.|++.|.|+|+|.+.
T Consensus 6 ~~P~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~-~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2dju_A 6 SGPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD-GVATT-RYSIGGLSPFSEYAFRVLAVNS 83 (106)
T ss_dssp CSCCCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC-CCCSS-EEEEESCCTTCEEEEEEEEECS
T ss_pred cCCcCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc-CCCcc-EEEEeCCCCCcEEEEEEEEEeC
Confidence 457889999999999999999999986678999999998865432222221 12344 8999999999999999999999
Q ss_pred CCCcccceeeeeccCCCCC
Q psy4956 168 SKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 168 ~~~s~~~~~~~~~t~p~~p 186 (361)
.|.+.++....++|.+.+|
T Consensus 84 ~G~~~~S~~~~~~T~~~~P 102 (106)
T 2dju_A 84 IGRGPPSEAVRARTGEQSG 102 (106)
T ss_dssp SCBCCCCCCEEEECCCSSC
T ss_pred CccCCCcccEEeEcCCCCC
Confidence 9888766666667765444
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=5.9e-12 Score=91.18 Aligned_cols=95 Identities=23% Similarity=0.367 Sum_probs=75.8
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCC-------CeEEeecCCCCceEEEcCCCCCcEEE
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTP-------PRIIGFTENPPAGYSLKDLTPGGSYQ 159 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~L~p~~~Y~ 159 (361)
.+|.++.+...+.+++.|+|++|. ++.+.+|+|.|+..+...+ .....+..... .+.|.+|.|++.|.
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~ 94 (125)
T 1uen_A 16 VAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKT-HGMLPGLEPFSHYT 94 (125)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCS-EEEEESCCSSCEEE
T ss_pred CCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCcc-EEEeCCCCCCCEEE
Confidence 678899999999999999999984 5779999999988654322 12445556666 99999999999999
Q ss_pred EEEEEEeCCCCcccceeeeeccCCCCC
Q psy4956 160 VQLFSVYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 160 v~v~a~~~~~~s~~~~~~~~~t~p~~p 186 (361)
|+|+|.+..|.+..+....++|.+..|
T Consensus 95 ~~V~A~n~~G~g~~S~~~~~~T~~~~P 121 (125)
T 1uen_A 95 LNVRVVNGKGEGPASPDRVFNTPEGSG 121 (125)
T ss_dssp EEEEEEESSCEEEECCCEEEECCCCCS
T ss_pred EEEEEecCCCCCCCCCCEEEECCCCCC
Confidence 999999999887766666777765544
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.4e-12 Score=89.06 Aligned_cols=95 Identities=18% Similarity=0.132 Sum_probs=74.7
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|++|..+... .+.+++.|+|.++. ..++.+|.|+|+..+...|.....++...+ ++.|.+|.|++.|.|+|.|.|
T Consensus 8 ~P~pP~~~~~~-~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~-~~~l~~L~p~t~Y~frV~A~N 85 (114)
T 2kbg_A 8 EPSPPSIHGQP-SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKD-HIILEHLQWTMGYEVQITAAN 85 (114)
T ss_dssp CCCSCCEECCB-CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTC-CEEECCCCTTCCEEEEEEEEC
T ss_pred CccCCcccccc-cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcC-EEEEcCCCCCCEEEEEEEEEe
Confidence 57777655443 57899999999865 346899999999976556766666777777 899999999999999999999
Q ss_pred CCCCcccceeeeeccCCCCC
Q psy4956 167 DSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p~~p 186 (361)
..|.|.++. ..+.|...+|
T Consensus 86 ~~G~s~pS~-~~~~T~~~~~ 104 (114)
T 2kbg_A 86 RLGYSEPTV-YEFSMPPKPN 104 (114)
T ss_dssp TTSCEEEEE-EEECCCCCCS
T ss_pred CCcCcCCcC-CEEEcCCCCc
Confidence 999998754 4566654444
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=92.02 Aligned_cols=90 Identities=18% Similarity=0.292 Sum_probs=62.9
Q ss_pred CCCCCceEEEEecCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccC
Q psy4956 264 DEISTPTTAQYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEG 343 (361)
Q Consensus 264 ~~~s~~~~~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (361)
.+.+.+......+.+.+|.+|++ ..++.+++.|+|++|.+ .+.+|.|.|...+.... .....+....++++|.+
T Consensus 15 ~~~s~p~~~~~~tp~~~P~~l~v--~~~t~~Si~lsW~~p~~--~i~~Y~V~y~~~~~~~~-~~~~~v~~~~t~~~l~g- 88 (121)
T 2ocf_D 15 DDDKGENLYFQGSVSDVPTKLEV--VAATPTSLLISWDAPAV--TVRYYRITYGETGGNSP-VQEFTVPGSKSTATISG- 88 (121)
T ss_dssp --------------CCSCEEEEE--EEECSSCEEEEEECCSS--CCCEEEEEEEETTTCSC-BEEEEEETTCCEEEECC-
T ss_pred CCccCCEEeeccCCCCCCCccEE--EecCCCEEEEEEcCCCC--CCcEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCC-
Confidence 34455666666677889999999 88999999999999987 79999999998764321 22233456678999996
Q ss_pred CCCCceEEEEEEEEeC
Q psy4956 344 LEPGRTYQVLVKTVSG 359 (361)
Q Consensus 344 L~p~t~Y~v~V~a~~~ 359 (361)
|+||+.|.|+|+|+++
T Consensus 89 L~P~t~Y~~~V~A~~~ 104 (121)
T 2ocf_D 89 LKPGVDYTITVYAVTG 104 (121)
T ss_dssp CCTTCEEEEEEEEECC
T ss_pred CCCCCEEEEEEEEEeC
Confidence 9999999999999975
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=6e-12 Score=87.71 Aligned_cols=94 Identities=28% Similarity=0.367 Sum_probs=73.9
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCce--eEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESV--LYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
++.|.+|.+|++...+.+++.|+|.++. + +.+|.|.|...++.... ...... ...+.|.+|+|++.|.|+
T Consensus 6 ~~~~~~P~~l~~~~~~~~sv~lsW~~p~--~-~~~Y~v~y~~~~~~~~~~~~~~~~~-----~~~~~l~~L~p~t~Y~~~ 77 (104)
T 2dkm_A 6 SGPLPPPRALTLAAVTPRTVHLTWQPSA--G-ATHYLVRCSPASPKGEEEEREVQVG-----RPEVLLDGLEPGRDYEVS 77 (104)
T ss_dssp SCSCCCCCCCEEEEECSSEEEEECCCCS--S-CSEEEEEEEESSSCCSSCCEEEEES-----SSEEEEESCCTTCCEEEE
T ss_pred eCCCCCCceeEEEecCCCEEEEEEeCCC--C-CCeEEEEEEECCCCCCcceEEEecC-----CCEEEECCCCCCCEEEEE
Confidence 3457789999999999999999999873 3 38999999876543211 112221 138999999999999999
Q ss_pred EEEEeCCCCCCceEEEEecCCCCC
Q psy4956 258 VQTVSEDEISTPTTAQYRTIPLRP 281 (361)
Q Consensus 258 V~a~~~~~~s~~~~~~~~t~~~~p 281 (361)
|+|.++.+.+.+....+.|.|.+|
T Consensus 78 V~A~~~~~~s~p~~~~~~T~p~~~ 101 (104)
T 2dkm_A 78 VQSLRGPEGSEARGIRARTPTSGP 101 (104)
T ss_dssp EEEECSSSBCCCEEEECCCCCCSC
T ss_pred EEEECCCCCCCCEEEEEEcCCCCC
Confidence 999999999999998888886543
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.1e-11 Score=91.26 Aligned_cols=119 Identities=15% Similarity=0.241 Sum_probs=87.8
Q ss_pred cceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCCC-CcccEEEEEEECC
Q psy4956 51 KDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG-KYSGFKLKVISLS 129 (361)
Q Consensus 51 ~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~-~~~~y~v~~~~~~ 129 (361)
.+++.+.+++ |+.|.|.++...-..... ......|.||.+|++..++.+++.|+|++|... .+.+|+|.+
T Consensus 117 vts~~vgdg~-g~~~~~~~~~k~v~i~~~----tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~GI~gY~ly~---- 187 (238)
T 2w1n_A 117 VTNSSVGDGE-GLVHEIAGTEKTVNIIEG----TSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYK---- 187 (238)
T ss_dssp EEEEEEECTT-SCEEECBCEEEEEEEECC----CCCCCCCCCCEEEEEEEECSSCEEEEEECCSCCTTEEEEEEEE----
T ss_pred eeeEEEecCC-CcEEEeeccceeeeeccC----CCCcCccCCCCceEEEEccCCeEEEEecCCCCCCCceeEEEEe----
Confidence 6889999999 999999876311000000 011234689999999999999999999998842 389999976
Q ss_pred CCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeecc
Q psy4956 130 EKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t 181 (361)
+ ......++...+ +|++.+|+|+|.|.|+|.|.+..|.........++|
T Consensus 188 ~--g~~v~~v~~~~t-syt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrT 236 (238)
T 2w1n_A 188 D--GKKVAEIGKDET-SYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRT 236 (238)
T ss_dssp T--TEEEEEEETTCC-EEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEEC
T ss_pred C--CceeEEeeccce-EEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEe
Confidence 2 244456667777 999999999999999999999887765444444444
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.5e-12 Score=86.75 Aligned_cols=85 Identities=22% Similarity=0.425 Sum_probs=69.5
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC-C-CceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA-P-ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
+|.+|.+...+.+++.|+|+++ .+.+.+|.|.|+..+. . .....+ +...+++.|.+|.|++.|.|+|+|.+
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p--~~~i~~Y~v~y~~~~~~~~~~~~~~-----~~~~t~~~l~gL~P~t~Y~~~V~A~~ 76 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAP--DAAFDSFMIQYQESEKVGEAINLTV-----PGSERSYDLTGLKPGTEYTVSIYGVK 76 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECC--TTSCSEEEEEEEETTBCSCCEEEEE-----ETTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEecCC--cCccceEEEEEEECCCCCceEEEEc-----CCCcCEEEECCCCCCCEEEEEEEEEe
Confidence 6889999999999999999987 3578999999997653 2 222222 23458999999999999999999999
Q ss_pred CCCCCCceEEEEec
Q psy4956 263 EDEISTPTTAQYRT 276 (361)
Q Consensus 263 ~~~~s~~~~~~~~t 276 (361)
+.+.|.+....+.+
T Consensus 77 ~~g~S~p~~~~~~~ 90 (98)
T 3tes_A 77 GGHRSNPLSAEFTT 90 (98)
T ss_dssp TTEEBCCEEEEEEC
T ss_pred CCcccCCEEEEEEc
Confidence 99999888876655
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=4.8e-12 Score=90.65 Aligned_cols=97 Identities=19% Similarity=0.249 Sum_probs=74.5
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.|.+|.++.+...+.+++.|+|+++...+.+.+|.|.|+..+......... .....+.+.+.+|.|++.|.|+|+|.
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~ 93 (118)
T 2yrz_A 17 VPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNI---PNPAQTSVVVEDLLPNHSYVFRVRAQ 93 (118)
T ss_dssp CCCCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEEE---SCTTCCEEEEESCCTTCEEEEEEEEE
T ss_pred CCCCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEEc---CCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence 378899999998999999999998765578999999999866544322211 12345889999999999999999999
Q ss_pred eCCCCCCceE--EEEecCCCCC
Q psy4956 262 SEDEISTPTT--AQYRTIPLRP 281 (361)
Q Consensus 262 ~~~~~s~~~~--~~~~t~~~~p 281 (361)
+..|.+.... +...+.+.+|
T Consensus 94 n~~G~g~~S~~~~~~~t~~~~p 115 (118)
T 2yrz_A 94 SQEGWGREREGVITIESQVSGP 115 (118)
T ss_dssp ESSCEEEEEEEEEECCCSCCCC
T ss_pred cCCcCCCCcCCceEeCCCCCCC
Confidence 9999886665 3444444444
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=7.2e-12 Score=89.43 Aligned_cols=92 Identities=16% Similarity=0.329 Sum_probs=73.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+...+ . .+....+ .+.|.+|.|++.|.|+|+|.+
T Consensus 17 ~P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-~--~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 92 (116)
T 1x5g_A 17 LPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKE-Q--DVDVSSH-SYTINGLKKYTEYSFRVVAYN 92 (116)
T ss_dssp CCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCC-C--CEEECSS-EEEECSCCTTCEEEEEEEEEC
T ss_pred CCcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCcc-E--EEecCCc-eEEEcCCCCCCEEEEEEEEEc
Confidence 57788999999999999999999985 5678999999988754333 2 2223455 999999999999999999999
Q ss_pred CCCCcccceeeeeccCCC
Q psy4956 167 DSKESVAYTSRNFTTKPN 184 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p~ 184 (361)
..|.+..+....++|.+.
T Consensus 93 ~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 93 KHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp SSCCCCBCCCCCEECCCS
T ss_pred CCCcCCCCCCEEEECCCC
Confidence 988877665566666643
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=92.21 Aligned_cols=95 Identities=19% Similarity=0.278 Sum_probs=74.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|.+|.++.+...+.+++.|+|++|.++.+.+|+|+|+..+...+ ..... ...+ .+.|.+|.|++.|.|+|+|.+..
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~-~~~~~-~~~~-~~~i~~L~p~t~Y~~~V~A~n~~ 93 (115)
T 1x5z_A 17 VPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEE-QRITI-EPGT-SYRLQGLKPNSLYYFRLAARSPQ 93 (115)
T ss_dssp CCCCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCC-BCCEE-CSSS-EEEEECCCTTCEEEECEEEECSS
T ss_pred CCCCCccCEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCc-eEEec-CCCc-EEEECCCCCCCeEEEEEEEECCC
Confidence 567788999988889999999999887778999999988654333 22222 3345 99999999999999999999999
Q ss_pred CCcccceeeeeccCCCCC
Q psy4956 169 KESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 169 ~~s~~~~~~~~~t~p~~p 186 (361)
|.+..+....++|.+.+|
T Consensus 94 G~g~~S~~~~~~T~~~~P 111 (115)
T 1x5z_A 94 GLGASTAEISARTMQSSG 111 (115)
T ss_dssp CEEEECCCEEEECCCCCC
T ss_pred cccCCCcCEEEecCCCCC
Confidence 888766666777765444
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.8e-12 Score=90.79 Aligned_cols=88 Identities=15% Similarity=0.257 Sum_probs=71.0
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+.........+..... .+.|.+|.|++.|.|+|+|.+
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 17 VPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTL-EYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp SCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEECSSCC-EEEEESCCTTCEEEEEEEEEC
T ss_pred CCCCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEEEeCCCce-EEEEcCCCCCCEEEEEEEEEc
Confidence 47778899999889999999999986 567889999999865433333345555666 999999999999999999999
Q ss_pred CCCCcccceee
Q psy4956 167 DSKESVAYTSR 177 (361)
Q Consensus 167 ~~~~s~~~~~~ 177 (361)
..|.+..+...
T Consensus 96 ~~G~g~~S~~~ 106 (119)
T 1wfn_A 96 SKGQGQVSAST 106 (119)
T ss_dssp SSCEEEEEEEE
T ss_pred CCccCCCCCCE
Confidence 99888765444
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=2.2e-12 Score=92.91 Aligned_cols=107 Identities=14% Similarity=0.244 Sum_probs=79.1
Q ss_pred ccceeeEEEecCCCCCCcc--EEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeE-EeecCCCCceEEEcCC
Q psy4956 78 DWLTWTASITTPPDPPTNL--SVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDL 152 (361)
Q Consensus 78 ~~~~~~~~~~t~~~~p~~l--~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L 152 (361)
......+.+.+.|.+|.++ .+...+.+++.|+|.+|.+ +.+.+|+|+|+..+ ..|... ..+..... .+.+.+|
T Consensus 6 ~~~s~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~-~~~v~~L 83 (121)
T 1wf5_A 6 SGRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLASVDPKAT-SVTVKGL 83 (121)
T ss_dssp CCCCCCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEESSCCTTCC-EEEEESC
T ss_pred ccceEEEEEeeCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEcccCCCcc-EEEECCc
Confidence 3344456666789999999 7777788999999998763 45889999998764 334333 23344555 9999999
Q ss_pred CCCcEEEEEEEEEeCCCCcccceee-eeccCCCCC
Q psy4956 153 TPGGSYQVQLFSVYDSKESVAYTSR-NFTTKPNTP 186 (361)
Q Consensus 153 ~p~~~Y~v~v~a~~~~~~s~~~~~~-~~~t~p~~p 186 (361)
.|++.|.|+|+|.+..|.+.++... .+++.+.+|
T Consensus 84 ~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P 118 (121)
T 1wf5_A 84 VPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGP 118 (121)
T ss_dssp CTTCEEEEEEEEEESSCEEEECCCCSCEECCCCSS
T ss_pred CCCCEEEEEEEEEcCCccCCCcCCcceeEcCCCCC
Confidence 9999999999999999888765443 355655545
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=90.20 Aligned_cols=91 Identities=16% Similarity=0.200 Sum_probs=71.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeE-EeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
++.+|.++.+.. ..+++.|+|++|.+ +.+.+|.|+|+.. ...|... ..+....+ .+.+.+|.+++.|.|||.|.
T Consensus 7 p~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~~~~~~t-~~~v~~L~pg~~Y~FRV~A~ 83 (108)
T 1v5j_A 7 GLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPAVAGTET-ELLVPGLIKDVLYEFRLVAF 83 (108)
T ss_dssp CCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEEECSSCC-EEECCCCCTTSCEECCBEEE
T ss_pred CCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeeecCCCcC-EEEeCCCCCCCEEEEEEEEE
Confidence 467888898865 56789999999873 5699999999983 3345432 23455666 99999999999999999999
Q ss_pred eCCCCcccceeeeeccC
Q psy4956 166 YDSKESVAYTSRNFTTK 182 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~ 182 (361)
+..|.|.++....+.|.
T Consensus 84 n~~G~s~pS~~~~v~T~ 100 (108)
T 1v5j_A 84 AGSFVSDPSNTANVSTS 100 (108)
T ss_dssp ETTEEEEECSCCCCCCS
T ss_pred cCCCCcCCCCCEEEEeC
Confidence 99999988766666665
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=5.7e-12 Score=88.26 Aligned_cols=95 Identities=20% Similarity=0.298 Sum_probs=74.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC-C-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS-G-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~-~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|.. + .+.+|+|+|+.... .+... .....+ .+.|.+|.|++.|.|+|+|.+
T Consensus 7 ~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~-~~~~~--~~~~~~-~~~v~~L~p~t~Y~frV~A~n 82 (106)
T 1x4x_A 7 GPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEG-SMQIC--YCGPGL-SYEIKGLSPATTYYCRVQALS 82 (106)
T ss_dssp SCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTT-SCCEE--EEESCS-EEEEESCCSSCEEEEEEEEEC
T ss_pred CcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCC-ceEEE--EeCCcc-eEEEcCCCCCCEEEEEEEEEc
Confidence 577889999999999999999999873 3 68999999976542 22222 223445 899999999999999999999
Q ss_pred CCCCcccceeeeeccCCCCCc
Q psy4956 167 DSKESVAYTSRNFTTKPNTPG 187 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p~~p~ 187 (361)
..|.+..+....++|.+.+|.
T Consensus 83 ~~G~g~~S~~v~~~T~~~~P~ 103 (106)
T 1x4x_A 83 VVGAGPFSEVVACVTPPSSGP 103 (106)
T ss_dssp SSCCCCBCCCEEEECCCCCSC
T ss_pred CCcCCCCcCCEEEECCCCCcC
Confidence 998887666677777765553
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-11 Score=84.83 Aligned_cols=91 Identities=24% Similarity=0.463 Sum_probs=72.6
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
+.+|.++.+...+.+++.|+|.++ .+.+.+|.|.|...++......... ....+.+.|.+|.|++.|.|+|.|.+
T Consensus 2 ~~~P~~l~v~~~~~~sv~l~W~~p--~~~i~~Y~v~y~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~A~n 76 (98)
T 3teu_A 2 LDAPTDLQVTNVTDTSITVSWTPP--SATITGYRITYTPSNGPGEPKELTV---PPSSTSVTITGLTPGVEYVVSVYALK 76 (98)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECC--SSCCSEEEEEEEETTSCSCCEEEEE---CTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCceEEEEecCCEEEEEEeCC--CCcccEEEEEEEECCCCCceEEEEc---CCCcCEEEecCCCCCCEEEEEEEEEe
Confidence 568999999999999999999987 4788999999986544222111111 24468999999999999999999999
Q ss_pred CCCCCCceEEEEecCC
Q psy4956 263 EDEISTPTTAQYRTIP 278 (361)
Q Consensus 263 ~~~~s~~~~~~~~t~~ 278 (361)
..|.+.+......+.+
T Consensus 77 ~~G~s~p~~~~~~~~~ 92 (98)
T 3teu_A 77 DNQESPPLVGTQTTGG 92 (98)
T ss_dssp TTEECCCEEEEEECSC
T ss_pred CCCCCCCeEEEeccCc
Confidence 9999999887776654
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-12 Score=90.72 Aligned_cols=93 Identities=19% Similarity=0.227 Sum_probs=71.8
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCC-cccEEEEEEECCCCCCCeEE-ee--cCCCCceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGK-YSGFKLKVISLSEKTPPRII-GF--TENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~-~~~y~v~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
.|.+|.++.+...+.+ +.|+|++|. +|. +.+|+|+|+..+...+.... .+ ....+ .+.|.+|.|++.|.|+|
T Consensus 6 ~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~rV 83 (105)
T 2haz_A 6 TPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEG-IVTIVGLKPETTYAVRL 83 (105)
T ss_dssp CCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHS-EEEECSCCTTCEEEEEE
T ss_pred CCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCcc-EEEECCCCCCCEEEEEE
Confidence 5777888888887777 999999986 455 89999999987654343221 11 12334 89999999999999999
Q ss_pred EEEeCCCCcccceeeeeccCC
Q psy4956 163 FSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~p 183 (361)
+|.+..|.+..+....++|.|
T Consensus 84 ~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 84 AALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEETTEECCCCCCEEEECCC
T ss_pred EEEcCCccCCCcCCEeeEEec
Confidence 999999988877777777764
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-11 Score=87.23 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=73.8
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC--C-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS--G-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..|.+|..+.+...+.+++.|+|.+|.+ + .+.+|.|+|+..+......... ..... .+.+.+|.|++.|.|+|+|
T Consensus 6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~-~~~v~~L~p~t~Y~frV~A 83 (109)
T 1x5x_A 6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKY-DGEDL-AYTVKNLRRSTKYKFKVIA 83 (109)
T ss_dssp CCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEE-EESCS-EEEEESCCSSCEEEEEEEE
T ss_pred CCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeE-eCCcc-EEEECCCCCCCEEEEEEEE
Confidence 3577788888888999999999998873 2 5799999998765432333222 22345 8999999999999999999
Q ss_pred EeCCCCcccceeeeeccCCCCC
Q psy4956 165 VYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p~~p 186 (361)
.+..|.+.++....++|.+.+|
T Consensus 84 ~n~~G~s~~S~~~~~~T~~~~P 105 (109)
T 1x5x_A 84 YNSEGKSNPSEVVEFTTCPDSG 105 (109)
T ss_dssp ECSSCEEEECCCEEEECCCCCC
T ss_pred EeCCCCcCCccCEEeEeCCCCC
Confidence 9999888766666667765554
|
| >3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.7e-12 Score=100.11 Aligned_cols=161 Identities=16% Similarity=0.125 Sum_probs=93.0
Q ss_pred CCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCcee---EEeeccCCCCCcEEEecC--CCCCCeEEEEE
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVL---YVEKEGEPPGPAQAAFKG--LVPGRAYNISV 258 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--L~p~t~Y~v~V 258 (361)
+|.|+.+...+...+ |.|+++... +....|.|+|...+...+.. ..... .+.+.|++ +.+...|.++|
T Consensus 10 ~P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~-----~~~Cdlt~~~~~~~~~Y~~RV 83 (211)
T 3g9v_A 10 KPQRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQ-----ELSCDLTSETSDIQEPYYGRV 83 (211)
T ss_dssp CCEEEEEEEETTEEE-EEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEEC-----CSEEECTGGGCSTTSCEEEEE
T ss_pred CCceeEEEEEcCceE-EEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCC-----CCEECCCCcccccCccEEEEE
Confidence 599999977666554 999987432 34678999998765444332 12221 36788864 57889999999
Q ss_pred EEEeCCCCCCceEEE-E----ecCCCCCccceEEeeecCCceEEEEeeCCCC-----CCC--------ceeEEEEEEECC
Q psy4956 259 QTVSEDEISTPTTAQ-Y----RTIPLRPLSFTYDKASITSNSLRVVWEPPKG-----FSE--------FDKYQVSINVRR 320 (361)
Q Consensus 259 ~a~~~~~~s~~~~~~-~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~-----~~~--------~~~y~i~~~~~~ 320 (361)
+|.++.+.|..+... + .+.+.||. +.+ .. ..++|.|.|.+|.. .+. ...|+|.|.+.+
T Consensus 84 ~A~~~~~~S~ws~~~~f~~~~~t~i~PP~-v~v--~~-~~~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~ 159 (211)
T 3g9v_A 84 RAASAGSYSEWSMTPRFTPWWETKIDPPV-MNI--TQ-VNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNS 159 (211)
T ss_dssp EEEETTEECCCEECCCBCHHHHCBCCCCE-EEC--C------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC---
T ss_pred EEECCCCcCCCEecCcccccccCccCCCE-EEE--EE-cCCEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECC
Confidence 999988877654321 1 34566674 777 33 34699999999753 111 256999988764
Q ss_pred CCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
... . ..........+.|.+ |+|++.|-|+|+|...
T Consensus 160 ~~~--~-~~~~~~~~~~~~i~~-L~p~t~Ycv~V~a~~~ 194 (211)
T 3g9v_A 160 LEK--E-QKVYEGAHRAVEIEA-LTPHSSYCVVAEIYQP 194 (211)
T ss_dssp -----C-EEEEEESSCCCC-----------CEEEEEEET
T ss_pred Ccc--E-EEEEecCCcEEEEec-CCCCCeEEEEEEEEeC
Confidence 321 1 111223445788986 9999999999999853
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=5.7e-12 Score=90.63 Aligned_cols=99 Identities=13% Similarity=0.224 Sum_probs=75.1
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCC--CCC----cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGK----YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~----~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
...|.+|.++++...+.+++.|+|.++. ++. +.+|+|.|+..+... .....+....+ .+.|.+|+|++.|.|
T Consensus 16 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~-~~~~~~~~~~~-~~~v~gL~P~T~Y~f 93 (123)
T 2edd_A 16 STPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSAS-AKYKSEDTTSL-SYTATGLKPNTMYEF 93 (123)
T ss_dssp CCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTT-CCCCCEEESSS-EEEEESCCTTCEEEE
T ss_pred CCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCC-ccEEEEeCCce-EEEecCCCCCCEEEE
Confidence 3467889999999999999999999865 222 349999998864221 11122233355 999999999999999
Q ss_pred EEEEEeCCCCcccceeeeeccCCC-CCc
Q psy4956 161 QLFSVYDSKESVAYTSRNFTTKPN-TPG 187 (361)
Q Consensus 161 ~v~a~~~~~~s~~~~~~~~~t~p~-~p~ 187 (361)
+|+|.+..|.+..+....++|.+. +|.
T Consensus 94 ~V~A~n~~g~g~~S~~v~~~T~~~~~Ps 121 (123)
T 2edd_A 94 SVMVTKNRRSSTWSMTAHATTYEASGPS 121 (123)
T ss_dssp EEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred EEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence 999999888888777777888776 663
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=5.4e-12 Score=88.45 Aligned_cols=95 Identities=21% Similarity=0.341 Sum_probs=74.2
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
..|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+.. ......+ ..+ .+.|.+|.|++.|.|+|+|.
T Consensus 6 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~-~~~~~~~--~~~-~~~i~~L~p~t~Y~~~V~A~ 81 (106)
T 2ed8_A 6 SGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTG-KEQNIEV--DGL-SYKLEGLKKFTEYSLRFLAY 81 (106)
T ss_dssp CCCCCCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTC-CEEEEEE--CSS-CEEEESCCTTCEEEEEEEEE
T ss_pred CCCcCCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCC-ceEEEeC--Ccc-EEEECCCCCCCEEEEEEEEE
Confidence 357789999998889999999999985 46789999999886543 2223333 345 89999999999999999999
Q ss_pred eCCCCcccceeeeeccCCCCC
Q psy4956 166 YDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~p~~p 186 (361)
+..|.+..+....++|....|
T Consensus 82 n~~G~g~~S~~~~~~T~~~~P 102 (106)
T 2ed8_A 82 NRYGPGVSTDDITVVTLSDSG 102 (106)
T ss_dssp CSSCEEEECCCEEEECCCCCC
T ss_pred eCCccCCCcCCEEEEcCCCCC
Confidence 998887766666666664433
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=3.8e-12 Score=91.06 Aligned_cols=102 Identities=16% Similarity=0.253 Sum_probs=74.6
Q ss_pred EEEecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 84 ~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
......|.+|.++.+...+.+++.|+|.+|. .+.+.+|+|+|+..+............... .+.+.+|.|++.|.|+
T Consensus 10 ~~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~fr 88 (117)
T 1uem_A 10 YDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTT-LYTVRGLRPNTIYLFM 88 (117)
T ss_dssp CCSCCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEEECSS-EEEECSCCTTCEEEEE
T ss_pred CCCCCCccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccccCcC-EEEECCCCCCCEEEEE
Confidence 3445578889999999999999999999876 345889999998764222222322333455 8999999999999999
Q ss_pred EEEEeCCCCcccceeee-eccCCCCC
Q psy4956 162 LFSVYDSKESVAYTSRN-FTTKPNTP 186 (361)
Q Consensus 162 v~a~~~~~~s~~~~~~~-~~t~p~~p 186 (361)
|+|.+..|.+.++.... +++.+.+|
T Consensus 89 V~A~n~~G~s~~S~~~~~v~t~~~~P 114 (117)
T 1uem_A 89 VRAINPQGLSDPSPMSDPVRTQDSGP 114 (117)
T ss_dssp EEEEETTEEEEECCCCCCEECCCSSC
T ss_pred EEEECCCccCCCcCCCccEEccCCCC
Confidence 99999988876544333 55554333
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=99.36 E-value=5.3e-12 Score=85.24 Aligned_cols=79 Identities=22% Similarity=0.391 Sum_probs=68.6
Q ss_pred CccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCccc
Q psy4956 94 TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA 173 (361)
Q Consensus 94 ~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~ 173 (361)
.++++..++.+++.|+|++| .+.+.+|+|.|...++....++..++...+ ++.|.+|.|+++|.|.|.|.+.++.+.+
T Consensus 10 ~~l~vt~vt~~S~~lsW~~p-~~~v~~Y~I~y~~~~g~~~~~~~~v~g~~~-s~~l~~L~PgT~Y~V~v~a~~~~~~S~p 87 (95)
T 2h41_A 10 TSESVTEITASSFVVSWVSA-SDTVSGFRVEYELSEEGDEPQYLDLPSTAT-SVNIPDLLPGRKYIVNVYQISEDGEQSL 87 (95)
T ss_dssp CTTSCCCCGGGCEEEECCCS-CTTEEEEEEEEEETTTCCCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEEETTSCEEE
T ss_pred EEEEEEEeCCCeEEEEECCC-CCCccEEEEEEEeCCCCCcceEEECCCCcc-EEEECCCCCCCEEEEEEEEEcCCCcccC
Confidence 56777888999999999997 589999999999976644556788888888 9999999999999999999999988876
Q ss_pred c
Q psy4956 174 Y 174 (361)
Q Consensus 174 ~ 174 (361)
.
T Consensus 88 ~ 88 (95)
T 2h41_A 88 I 88 (95)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-11 Score=84.00 Aligned_cols=89 Identities=20% Similarity=0.352 Sum_probs=71.2
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
.+|.+|++...+.+++.|+|+++. +.+.+|.|.|...++..... . .......+++.+.+|.|++.|.|+|.|+++
T Consensus 3 ~~P~~l~~~~~~~~si~lsW~~p~--~~i~~Y~v~y~~~~~~~~~~-~--~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~ 77 (94)
T 1j8k_A 3 DRPKGLAFTDVDVDSIKIAWESPQ--GQVSRYRVTYSSPEDGIHEL-F--PAPDGEEDTAELQGLRPGSEYTVSVVALHD 77 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCS--SCCSCEEEEEEETTTEEEEE-C--CCCCSSCCEEEECSCCCCSEEEEEEEECSS
T ss_pred CCCCccEEEeecCCEEEEEEcCCC--CCcceEEEEEEeCCCCCceE-E--ecCCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence 578999999999999999999873 67899999998765421111 1 111234689999999999999999999999
Q ss_pred CCCCCceEEEEecC
Q psy4956 264 DEISTPTTAQYRTI 277 (361)
Q Consensus 264 ~~~s~~~~~~~~t~ 277 (361)
.|.+.+....+.|.
T Consensus 78 ~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 78 DMESQPLIGTQSTA 91 (94)
T ss_dssp SCCCCCEEEEEECC
T ss_pred CCcCCCEEeEEEec
Confidence 99999988887775
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-11 Score=88.08 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=73.1
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCC-CCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.+|.++.+...+.+++.|.|.++... +.+.+|.|+|+.... ..+....... .+.+.+.+|.|++.|.|+|+
T Consensus 17 ~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-----~~~~~v~~L~p~t~Y~frV~ 91 (118)
T 1x3d_A 17 EPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGS-----QKQFKITKLSPAMGCKFRLS 91 (118)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEEES-----CSEEEEESCCTTCEEEEECC
T ss_pred CCcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEeeccC-----CcEEEeCCCCCCCEEEEEEE
Confidence 3788899999999999999999887533 568999999987655 3333332222 37899999999999999999
Q ss_pred EEeCCCCCCceE-EEEecCCCCCc
Q psy4956 260 TVSEDEISTPTT-AQYRTIPLRPL 282 (361)
Q Consensus 260 a~~~~~~s~~~~-~~~~t~~~~p~ 282 (361)
|.|..|.+.+.. ..+.|.+.+|.
T Consensus 92 A~n~~G~s~~S~~~~~~T~~~~P~ 115 (118)
T 1x3d_A 92 ARNDYGTSGFSEEVLYYTSGCSGP 115 (118)
T ss_dssp EEESSCBCCCCCCEEEECSCCCCC
T ss_pred EEECCCCCCCccCEEEEcCCCCCc
Confidence 999988776543 44566666553
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-11 Score=88.63 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=73.7
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCC-CCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEK-TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
.|.+|.++.+...+.+++.|+|.+|. .+.+.+|.|+|+..... .|..... .... .+.+.+|.|++.|.|+|+|.
T Consensus 17 ~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~-~~~v~~L~p~t~Y~frV~A~ 93 (118)
T 1x3d_A 17 EPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM--GSQK-QFKITKLSPAMGCKFRLSAR 93 (118)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE--ESCS-EEEEESCCTTCEEEEECCEE
T ss_pred CCcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEeec--cCCc-EEEeCCCCCCCEEEEEEEEE
Confidence 57888999999999999999999986 34578999999765442 3333322 2345 89999999999999999999
Q ss_pred eCCCCcccceeeeeccCCCCC
Q psy4956 166 YDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~p~~p 186 (361)
+..|.+.++....+.|.+.+|
T Consensus 94 n~~G~s~~S~~~~~~T~~~~P 114 (118)
T 1x3d_A 94 NDYGTSGFSEEVLYYTSGCSG 114 (118)
T ss_dssp ESSCBCCCCCCEEEECSCCCC
T ss_pred ECCCCCCCccCEEEEcCCCCC
Confidence 999888776666666665444
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-11 Score=86.23 Aligned_cols=95 Identities=19% Similarity=0.156 Sum_probs=73.3
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCC-cceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPAS-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|.++.+...+.+++.|+|+++...+ .+.+|.|+|........ ..... ..+.+.+.+|.|++.|.|+|+|
T Consensus 7 ~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~-~~~~~-----~~~~~~v~~L~p~t~Y~frV~A 80 (106)
T 1x4x_A 7 GPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQ-ICYCG-----PGLSYEIKGLSPATTYYCRVQA 80 (106)
T ss_dssp SCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCC-EEEEE-----SCSEEEEESCCSSCEEEEEEEE
T ss_pred CcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceE-EEEeC-----CcceEEEcCCCCCCEEEEEEEE
Confidence 47788899998899999999999875444 78999999987653322 22222 2378999999999999999999
Q ss_pred EeCCCCCCce-EEEEecCCCCCc
Q psy4956 261 VSEDEISTPT-TAQYRTIPLRPL 282 (361)
Q Consensus 261 ~~~~~~s~~~-~~~~~t~~~~p~ 282 (361)
.|..|.+... .+.+.|.+.+|.
T Consensus 81 ~n~~G~g~~S~~v~~~T~~~~P~ 103 (106)
T 1x4x_A 81 LSVVGAGPFSEVVACVTPPSSGP 103 (106)
T ss_dssp ECSSCCCCBCCCEEEECCCCCSC
T ss_pred EcCCcCCCCcCCEEEECCCCCcC
Confidence 9999888654 356777776664
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=5.5e-12 Score=91.28 Aligned_cols=92 Identities=17% Similarity=0.248 Sum_probs=70.1
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|.++.+.... +++.|+|+++... +.+.+|.|.|.... ... .... .....+.+.|.+|.|++.|.|+|+|
T Consensus 27 ~P~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~~-~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A 100 (126)
T 1x5i_A 27 VPEVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGS-PHA-QTIK---VDYKQRYYTIENLDPSSHYVITLKA 100 (126)
T ss_dssp CCCSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSC-GGG-EEEE---CCTTCCEEEECSCCSSCEECCEEEE
T ss_pred CCCCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CCc-eEEE---eCCCeeEEEEeCCCCCCEEEEEEEE
Confidence 57788999999887 9999999987533 77999999998532 111 1111 1345689999999999999999999
Q ss_pred EeCCCCCCceEEEEecCCC
Q psy4956 261 VSEDEISTPTTAQYRTIPL 279 (361)
Q Consensus 261 ~~~~~~s~~~~~~~~t~~~ 279 (361)
++..|.+.+....+.|.+.
T Consensus 101 ~n~~G~g~~s~~~~~T~~~ 119 (126)
T 1x5i_A 101 FNNVGEGIPLYESAVTRPH 119 (126)
T ss_dssp ECSSCBCCCCCCCEECCCC
T ss_pred EeCCccCcceeeEEecccC
Confidence 9999988777655555443
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.1e-11 Score=87.64 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=73.9
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECC-CCCCCeEE-eecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLS-EKTPPRII-GFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~-~~~~~~~~-~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
...|.+|.++.+...+.+++.|+|.++.+ +.+.+|.|+|+... ...|.... .+..... .+.|.+|.|++.|.|+|
T Consensus 15 ~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~-~~~v~~L~p~t~Y~frV 93 (121)
T 1x4z_A 15 LSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRL-SVEITGLEKGISYKFRV 93 (121)
T ss_dssp CCCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCC-EEEEESCCTTCEEEEEE
T ss_pred CCCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecccCCCcC-EEEECCCCCCCEEEEEE
Confidence 34688899999999999999999997653 34799999999865 23443332 2344556 99999999999999999
Q ss_pred EEEeCCCCcccceee-eeccCCCCC
Q psy4956 163 FSVYDSKESVAYTSR-NFTTKPNTP 186 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~-~~~t~p~~p 186 (361)
+|.+..|.+.++... .+++.+.+|
T Consensus 94 ~A~n~~G~s~~S~~~~~v~~~~~~P 118 (121)
T 1x4z_A 94 RALNMLGESEPSAPSRPYVVSGSGP 118 (121)
T ss_dssp EEEETTEECCCCCCCCCEECCSSCC
T ss_pred EEEcCCCcCCCcCCCCCEEcCCCCC
Confidence 999998887654433 244444444
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.8e-11 Score=87.69 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=69.8
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCc-eeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPES-VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
+|.++.+...+.+++.|+|+++.. +.+.+|.|.|...+.... ...... ....+.+.|.+|.|++.|.|+|+|.+.
T Consensus 21 ~P~~l~~~~~~~~sv~l~W~~p~~-g~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 2ee2_A 21 APTEVGVKVLSSSEISVHWEHVLE-KIVESYQIRYWAAHDKEEAANRVQV---TSQEYSARLENLLPDTQYFIEVGACNS 96 (119)
T ss_dssp CCCSCEEEEEETTEEEEECCCCSC-TTCCEEEEEEEESSSCGGGCEEEEE---ETTCSEEEECSCCTTCEEEEEEEEECS
T ss_pred CCCcEEEEEccCCEEEEEecCCCC-CccceEEEEEEECCCcccCcEEEEc---CCCEeEEEECCCCCCCEEEEEEEEEcC
Confidence 577999999999999999998855 889999999987653321 111111 123478999999999999999999999
Q ss_pred CCCCCceE-EEEecCCCCC
Q psy4956 264 DEISTPTT-AQYRTIPLRP 281 (361)
Q Consensus 264 ~~~s~~~~-~~~~t~~~~p 281 (361)
.|.+.... +.+.|...+|
T Consensus 97 ~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 97 AGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp SSCCCCCCCEEEECCCCCC
T ss_pred CccCCCCCCEEEECCCCCC
Confidence 88876553 4566655444
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.6e-13 Score=94.22 Aligned_cols=98 Identities=18% Similarity=0.286 Sum_probs=78.0
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.+.|.+|.+|++...+.+++.|+|+++ .+.+.+|.|.|...++....... ......+.+.|.+|.|++.|.|+|+
T Consensus 5 ~~~p~~P~~l~v~~~t~~si~lsW~~p--~g~i~~Y~v~y~~~~~~~~~~~~---~v~~~~~~~~l~~L~p~t~Y~~~V~ 79 (105)
T 2ekj_A 5 SSGRSPPSNLALASETPDSLQVSWTPP--LGRVLHYWLTYAPASGLGPEKSV---SVPGARSHVTLPDLQAATKYRVLVS 79 (105)
T ss_dssp CTTCCCCEEEEEEEEETTEEEEEEECC--SSCCSBBCBBCCCTTSCSCCCCB---CCBTTSSEEEECSCCSSCCCBCBBC
T ss_pred ccCCCCCCceEEEeCCCCEEEEEEeCC--CCcceEEEEEEEECCCCCccEEE---EeCCCcCEEEeCCCCCCCEEEEEEE
Confidence 355789999999999999999999988 47889999999876543211101 1134468999999999999999999
Q ss_pred EEeCCCCCCceEEEEecC-CCCCc
Q psy4956 260 TVSEDEISTPTTAQYRTI-PLRPL 282 (361)
Q Consensus 260 a~~~~~~s~~~~~~~~t~-~~~p~ 282 (361)
|++..|.+.+......|. |.+|.
T Consensus 80 A~~~~g~g~~s~~~~~T~~p~~P~ 103 (105)
T 2ekj_A 80 AIYAAGRSEAVSATGQTACPSGPS 103 (105)
T ss_dssp BBCSSCBCCCBCCBCCCCCCCCCC
T ss_pred EEeCCccCCccccEEEccCCCCCC
Confidence 999999998888777887 77664
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-11 Score=88.69 Aligned_cols=103 Identities=21% Similarity=0.268 Sum_probs=74.3
Q ss_pred CC-CCcceEEEeccCCeEEEEeecC--C-CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 183 PN-TPGKFIVWFRNETTLLVLWQPS--Y-PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 183 p~-~p~~l~~~~~~~~~~~v~W~~~--~-~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
|. +|.++.+...+.+++.|+|+++ . ..+.+.+|.|.|+..+......... .......+.+.|.+|.|++.|.|+|
T Consensus 18 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V 96 (134)
T 2edx_A 18 PSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVV-DGISREHSSWDLVGLEKWTEYRVWV 96 (134)
T ss_dssp CSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEE-CCCBTTCSEEEEESCCTTCEEEEEE
T ss_pred CCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEE-EeeCCCccEEEeCCCCCCCEEEEEE
Confidence 54 6789999999999999999987 2 2377899999998765433221111 1112445899999999999999999
Q ss_pred EEEeCCCCCCceE-EEEecC---C-CCCccceE
Q psy4956 259 QTVSEDEISTPTT-AQYRTI---P-LRPLSFTY 286 (361)
Q Consensus 259 ~a~~~~~~s~~~~-~~~~t~---~-~~p~~l~~ 286 (361)
+|.+..|.+.... +.+.|. | .+|.+|++
T Consensus 97 ~A~n~~G~g~~S~~~~~~T~~~~P~~~P~~l~~ 129 (134)
T 2edx_A 97 RAHTDVGPGPESSPVLVRTDEDVPSGPPRKVES 129 (134)
T ss_dssp EEEETTBCCCCCCCEEEECCCCSSCCCCCCCCC
T ss_pred EEEcCCCcCCCCCCEEeecCCCCCCCCCceeEE
Confidence 9999988775543 345554 3 35677776
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.8e-12 Score=91.39 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=74.4
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEEC---CCCCCCeEEee--cCCCCceEEEcCCCCCcEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISL---SEKTPPRIIGF--TENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~---~~~~~~~~~~~--~~~~~~~~~l~~L~p~~~Y~v 160 (361)
..|.+|.++.+...+.+++.|+|.++.+ +.+.+|.|+|+.. ....|...... ..... .+.+.+|.|++.|.|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~-~~~v~~L~p~t~Y~f 94 (124)
T 1wis_A 16 ELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDAR-SMEVPDLNPFTCYSF 94 (124)
T ss_dssp CCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCS-EEEECSCCTTSEECC
T ss_pred CCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCce-EEEeCCCCCCCEEEE
Confidence 3578889999988899999999998763 4589999999873 33334332222 34455 899999999999999
Q ss_pred EEEEEeCCCCccccee-eeeccCCCCCc
Q psy4956 161 QLFSVYDSKESVAYTS-RNFTTKPNTPG 187 (361)
Q Consensus 161 ~v~a~~~~~~s~~~~~-~~~~t~p~~p~ 187 (361)
+|+|.|..|.+.++.. ..++|.+.+|.
T Consensus 95 rV~A~N~~G~s~~S~~~~~~~T~~~~P~ 122 (124)
T 1wis_A 95 RMRQVNIVGTSPPSQPSRKIQTLQSGPS 122 (124)
T ss_dssp CCEEECSSCBCCCCCCCCCEECCCSSCC
T ss_pred EEEEEECCccCCCcCCccceEcCCCCCC
Confidence 9999999988876543 34666655553
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=6.6e-12 Score=91.17 Aligned_cols=102 Identities=18% Similarity=0.253 Sum_probs=75.4
Q ss_pred cceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCC--CCCeEEeecCCCCceEEEcCCCC
Q psy4956 79 WLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEK--TPPRIIGFTENPPAGYSLKDLTP 154 (361)
Q Consensus 79 ~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~~~l~~L~p 154 (361)
+....+.+...|.+|.++.+...+.+++.|+|.++. .+.+.+|.|+|+..... .|.....+....+ . .+.+|.|
T Consensus 6 s~~~~~~v~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~-~-~i~~L~p 83 (127)
T 1uey_A 6 SGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQT-T-AQLNLSP 83 (127)
T ss_dssp CCCCCCCCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCC-E-EEECCCT
T ss_pred cEEEEEEeecCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeeeCCCce-E-EEecCCC
Confidence 344455556789999999998889999999999875 35688999999875422 2333333444444 5 5779999
Q ss_pred CcEEEEEEEEEeCCCCccccee-eeeccC
Q psy4956 155 GGSYQVQLFSVYDSKESVAYTS-RNFTTK 182 (361)
Q Consensus 155 ~~~Y~v~v~a~~~~~~s~~~~~-~~~~t~ 182 (361)
++.|.|+|+|.+..|.+.++.. ..++|.
T Consensus 84 ~t~Y~frV~A~n~~G~s~~S~~~~~~~T~ 112 (127)
T 1uey_A 84 YVNYSFRVMAVNSIGKSLPSEASEQYLTK 112 (127)
T ss_dssp TCEECCEEEEEESSCBCCCCSCCCCEECC
T ss_pred CCEEEEEEEEEeCCccCCccccccceEcC
Confidence 9999999999999988876544 345555
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-11 Score=85.43 Aligned_cols=97 Identities=14% Similarity=0.176 Sum_probs=74.2
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|. +.+...+.+++.|+|+++.. .+.+.+|.|.|...+......... ....+++.+.+|.|++.|.|+|.|
T Consensus 7 ~P~~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~A 81 (107)
T 2dn7_A 7 GPGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDF----GKDDQHFTVTGLHKGTTYIFRLAA 81 (107)
T ss_dssp CCCCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEE----ETTCCEEEEECCCTTCEEEEEEEE
T ss_pred CCCCCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEEe----CCCccEEEeCCCCCCCEEEEEEEE
Confidence 366666 77777788999999998743 367999999998766544332211 233578999999999999999999
Q ss_pred EeCCCCCCceEEEEecCCCCCcc
Q psy4956 261 VSEDEISTPTTAQYRTIPLRPLS 283 (361)
Q Consensus 261 ~~~~~~s~~~~~~~~t~~~~p~~ 283 (361)
++..|.+.++...+.|.+..|..
T Consensus 82 ~n~~G~g~~s~~~~~T~~~~P~~ 104 (107)
T 2dn7_A 82 KNRAGLGEEFEKEIRTPEDLSGP 104 (107)
T ss_dssp EETTEEEEEEEEEEECCCCCCCC
T ss_pred EcCCcccCCeeeEEeCCCCCCCC
Confidence 99999888877777777666643
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-11 Score=87.30 Aligned_cols=90 Identities=21% Similarity=0.255 Sum_probs=70.7
Q ss_pred CCCCCCccEEEE--EeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 89 PPDPPTNLSVNV--RSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 89 ~~~~p~~l~~~~--~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.|.+|.++.+.. .+.+++.|+|++|. ++.+.+|+|+|+..+...+. .. ....+ .+.|.+|.|++.|.|+|+|
T Consensus 7 ~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~--~~~~~-~~~l~~L~p~t~Y~~~V~A 82 (108)
T 2dm4_A 7 GPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWA-SQ--RAASN-FTEIKNLLVNTLYTVRVAA 82 (108)
T ss_dssp CTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCE-EE--EESSS-EEEECSCCSSCEEEEEEEE
T ss_pred CCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeE-Ee--cCCcc-EEEeCCCCCCCEEEEEEEE
Confidence 577899988766 47889999999986 45689999999887543333 22 23345 8999999999999999999
Q ss_pred EeCCCCcccceeeeeccC
Q psy4956 165 VYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~ 182 (361)
.+..|.+..+....++|.
T Consensus 83 ~n~~G~g~~S~~~~~~T~ 100 (108)
T 2dm4_A 83 VTSRGIGNWSDSKSITTI 100 (108)
T ss_dssp EESSCEEEECCCEEEECC
T ss_pred ECCCceeCCCCCEEEECC
Confidence 999988876666666665
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=9.3e-12 Score=87.86 Aligned_cols=96 Identities=19% Similarity=0.360 Sum_probs=73.3
Q ss_pred cCCCCCCccEE-EEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 88 TPPDPPTNLSV-NVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 88 t~~~~p~~l~~-~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
..|.+|.++.+ ...+.+++.|+|++|. .+.+.+|.|+|+......+.... ..... .+.|.+|.|++.|.|+|+
T Consensus 7 ~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~-~~~v~~L~p~t~Y~frV~ 83 (110)
T 2crz_A 7 GPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY--QGSEV-ECTVSSLLPGKTYSFRLR 83 (110)
T ss_dssp CCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE--EESCS-EEEEESCCTTCEEEECCE
T ss_pred CCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE--eCCcE-EEEECCcCCCCEEEEEEE
Confidence 45788889888 4567889999998775 24588999999876544444333 23445 899999999999999999
Q ss_pred EEeCCCCcccceeeeeccCCCCC
Q psy4956 164 SVYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t~p~~p 186 (361)
|.+..|.+.++....+.|.+.+|
T Consensus 84 A~n~~G~g~~S~~~~~~T~~~~P 106 (110)
T 2crz_A 84 AANKMGFGPFSEKCDITTAPGSG 106 (110)
T ss_dssp EECSSCBCCCCCCEEEECCCSCC
T ss_pred EEcCCccCCCCCccccccCCCCC
Confidence 99999888776666667765444
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-11 Score=84.81 Aligned_cols=94 Identities=13% Similarity=0.176 Sum_probs=71.9
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
+.|.+|.+|++...+.+++.|+|++|.. +.+..|+|.|.... . ...+....+ .+.|.+|.|++.|.|+|+|.
T Consensus 6 ~~Ps~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~--~---~~~~~~~~t-~~~i~gL~PgT~Y~~~V~A~ 79 (104)
T 2dle_A 6 SGAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGET--D---SSNLNVSEP-RAVIPGLRSSTFYNITVCPV 79 (104)
T ss_dssp SSCCBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSS--C---EEEEEESSS-EEECCSCCSSCEEEEEEEEE
T ss_pred CCCCCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCC--C---eEEEcCCCC-EEEECCCCCCCEEEEEEEEE
Confidence 4678889999999999999999997653 33468999987532 1 234444556 99999999999999999999
Q ss_pred eCCCCcccceeeeeccCCCCCcc
Q psy4956 166 YDSKESVAYTSRNFTTKPNTPGK 188 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~p~~p~~ 188 (361)
.++..+.+ ....+.|.|+++..
T Consensus 80 ~~~~~~~p-~~~~~~T~p~p~~~ 101 (104)
T 2dle_A 80 LGDIEGTP-GFLQVHTPPVPSGP 101 (104)
T ss_dssp SSSCCCBC-EEEEEECCCCSCCC
T ss_pred ECCcccCC-eeEEEEccCCCCCC
Confidence 77766654 56667787776643
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-11 Score=85.62 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=72.9
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
..|.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|+..+...... .... .+.+.|.+|.|++.|.|+|+
T Consensus 6 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~-----~~~~~i~~L~p~t~Y~~~V~ 79 (106)
T 2ed8_A 6 SGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQN-IEVD-----GLSYKLEGLKKFTEYSLRFL 79 (106)
T ss_dssp CCCCCCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEE-EEEC-----SSCEEEESCCTTCEEEEEEE
T ss_pred CCCcCCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEE-EeCC-----ccEEEECCCCCCCEEEEEEE
Confidence 4578899999999999999999998743 378999999998765544322 2222 48899999999999999999
Q ss_pred EEeCCCCCCceE-EEEecCCCCC
Q psy4956 260 TVSEDEISTPTT-AQYRTIPLRP 281 (361)
Q Consensus 260 a~~~~~~s~~~~-~~~~t~~~~p 281 (361)
|.+..|.+.... +.+.|.+..|
T Consensus 80 A~n~~G~g~~S~~~~~~T~~~~P 102 (106)
T 2ed8_A 80 AYNRYGPGVSTDDITVVTLSDSG 102 (106)
T ss_dssp EECSSCEEEECCCEEEECCCCCC
T ss_pred EEeCCccCCCcCCEEEEcCCCCC
Confidence 999988765433 4566665544
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-11 Score=86.24 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=70.4
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCC-C--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPI-S--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~-~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
..+|.+|....+...+.+++.|+|++|. + ..+.+|.|+++..+...|........... .+++.+|.|++.|.|+|+
T Consensus 8 ~~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~-~~~v~~L~p~t~Y~frV~ 86 (112)
T 1bpv_A 8 SSPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILEN-EFTVSGLTEDAAYEFRVI 86 (112)
T ss_dssp -CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSS-EEEECSCCSSCCEEEEEE
T ss_pred CCCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecccCccC-EEEECCCCCCCEEEEEEE
Confidence 3467888888999999999999999765 2 34899999998865444433222223344 899999999999999999
Q ss_pred EEeCCCC-cccceeeeecc
Q psy4956 164 SVYDSKE-SVAYTSRNFTT 181 (361)
Q Consensus 164 a~~~~~~-s~~~~~~~~~t 181 (361)
|.+..|. |.++......+
T Consensus 87 A~N~~G~~s~~S~~~~~~t 105 (112)
T 1bpv_A 87 AKNAAGAISPPSEPSDAIT 105 (112)
T ss_dssp EECTTSCEEEEEEEEEEEC
T ss_pred EEECCCCCCCCCCCCCCEE
Confidence 9999996 87655444433
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=3.1e-11 Score=84.67 Aligned_cols=94 Identities=21% Similarity=0.450 Sum_probs=71.5
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|. +.+...+.+++.|+|++|. ++.+.+|.|+|+..+.. ......+....+ ++.|.+|.|++.|.|+|+|.+
T Consensus 7 ~P~~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~-~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 7 GPGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA-RPNTIDFGKDDQ-HFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CCCCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS-SCEEEEEETTCC-EEEEECCCTTCEEEEEEEEEE
T ss_pred CCCCCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCC-CCEEEEeCCCcc-EEEeCCCCCCCEEEEEEEEEc
Confidence 355566 6777778899999999986 46789999999986543 334455666666 999999999999999999999
Q ss_pred CCCCcccceeeeeccCCCCC
Q psy4956 167 DSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p~~p 186 (361)
..|.+..+. ..+.|....|
T Consensus 84 ~~G~g~~s~-~~~~T~~~~P 102 (107)
T 2dn7_A 84 RAGLGEEFE-KEIRTPEDLS 102 (107)
T ss_dssp TTEEEEEEE-EEEECCCCCC
T ss_pred CCcccCCee-eEEeCCCCCC
Confidence 998887654 4455543333
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=8.5e-12 Score=88.28 Aligned_cols=93 Identities=12% Similarity=0.183 Sum_probs=73.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+.. ......+..... .+.|.+|.|++.|.|+|+|.+
T Consensus 10 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~-~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 87 (111)
T 1x5l_A 10 APSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKE-MQSYSTLKAVTT-RATVSGLKPGTRYVFQVRART 87 (111)
T ss_dssp CCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSC-CSSCEEEEESSS-EEEECSCCTTCEEEECEEEEE
T ss_pred CCCCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCC-ceeEEEecCCCC-EEEEcCCCCCCEEEEEEEEEe
Confidence 46778889888888999999999986 46689999999886532 222233344555 999999999999999999999
Q ss_pred CCCCcccceeeeeccCC
Q psy4956 167 DSKESVAYTSRNFTTKP 183 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p 183 (361)
..|.+..+....++|.+
T Consensus 88 ~~G~g~~S~~~~~~T~~ 104 (111)
T 1x5l_A 88 SAGCGRFSQAMEVETGK 104 (111)
T ss_dssp TTEECCCCCCEEEECCC
T ss_pred CCcCCCCcccEEEEcCC
Confidence 99888766666677664
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=9.3e-12 Score=89.73 Aligned_cols=94 Identities=20% Similarity=0.357 Sum_probs=72.1
Q ss_pred CCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCe--EEee--cCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPR--IIGF--TENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~--~~~~--~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
+|.++.+...+.+++.|+|++|. ++.+.+|+|.|+..+...+.. ...+ ..... .+.|.+|.|++.|.|+|+
T Consensus 18 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~ 96 (122)
T 1va9_A 18 PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSE-VYTLDNLKKFAQYGVVVQ 96 (122)
T ss_dssp CCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEE-EEEEESCCSSCCEEEEEE
T ss_pred CCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCcee-EEEeCCCCCCCEEEEEEE
Confidence 68899998888999999999985 467899999999876433321 1111 22234 899999999999999999
Q ss_pred EEeCCCCcccceeeeeccCCCCC
Q psy4956 164 SVYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t~p~~p 186 (361)
|.+..|.+..+....++|....|
T Consensus 97 A~n~~G~g~~S~~~~~~T~~~~P 119 (122)
T 1va9_A 97 AFNRAGTGPSSSEINATTLESGP 119 (122)
T ss_dssp EEETTEECCCCCCEECCCCSSCC
T ss_pred EEcCCCCCCCccCEEEEeCCCCC
Confidence 99999888766666777765555
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=9.4e-12 Score=88.66 Aligned_cols=95 Identities=19% Similarity=0.279 Sum_probs=72.5
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.|.+|.++.+...+.+++.|+|+++.. +.+.+|.|.|+..+......... ...+.+.+.+|.|++.|.|+|+|.
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~-~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~~~V~A~ 90 (115)
T 1x5z_A 17 VPGQPLNFKAEPESETSILLSWTPPRS-DTIANYELVYKDGEHGEEQRITI-----EPGTSYRLQGLKPNSLYYFRLAAR 90 (115)
T ss_dssp CCCCCEEEEEECSSSSEEEEEEECCSC-CCCCEEEECBEESSSCCCBCCEE-----CSSSEEEEECCCTTCEEEECEEEE
T ss_pred CCCCCccCEeeeCCCCEEEEEEcCCCC-CCccEEEEEEEeCCCCCceEEec-----CCCcEEEECCCCCCCeEEEEEEEE
Confidence 477889999999999999999998753 57899999998765443322111 124889999999999999999999
Q ss_pred eCCCCCCceE-EEEecCCCCCc
Q psy4956 262 SEDEISTPTT-AQYRTIPLRPL 282 (361)
Q Consensus 262 ~~~~~s~~~~-~~~~t~~~~p~ 282 (361)
+..|.+..+. +.+.|.+.+|.
T Consensus 91 n~~G~g~~S~~~~~~T~~~~P~ 112 (115)
T 1x5z_A 91 SPQGLGASTAEISARTMQSSGP 112 (115)
T ss_dssp CSSCEEEECCCEEEECCCCCCC
T ss_pred CCCcccCCCcCEEEecCCCCCC
Confidence 9988765443 55677666553
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=87.49 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=67.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC--C-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS--G-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~--~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
.|.+|.++.+...+.+++.|+|++|.. + .+.+|.|+|+..+...|........... .+.+.+|.|++.|.|+|+|.
T Consensus 8 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~-~~~v~~L~p~t~Y~frV~A~ 86 (111)
T 1x5y_A 8 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERC-GFTVKDLPTGARILFRVVGV 86 (111)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSS-EEEEECCCTTCCEEEEEEEE
T ss_pred CCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCccc-EEEECCCCCCCEEEEEEEEE
Confidence 577889999999999999999999862 2 3899999998865433432221222344 89999999999999999999
Q ss_pred eCCCCccccee
Q psy4956 166 YDSKESVAYTS 176 (361)
Q Consensus 166 ~~~~~s~~~~~ 176 (361)
+..|.+.++..
T Consensus 87 n~~G~s~~S~~ 97 (111)
T 1x5y_A 87 NIAGRSEPATL 97 (111)
T ss_dssp ETTEECCCCCC
T ss_pred cCCcCCCCccC
Confidence 99888765443
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.9e-12 Score=93.79 Aligned_cols=92 Identities=24% Similarity=0.372 Sum_probs=69.7
Q ss_pred CC-CCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 90 PD-PPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 90 ~~-~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
|. +|.++.+...+.+++.|+|++|. ++.+.+|+|+|+..+...+.....+..... .+.|.+|.|++.|.|+|+|
T Consensus 18 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A 96 (132)
T 1x5h_A 18 PSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQL-SQLIEGLDRGTEYNFRVAA 96 (132)
T ss_dssp CCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCC-EEEEECCCSSCEEEEECEE
T ss_pred CCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEEEeCCCcc-EEEeCCCCCCCEEEEEEEE
Confidence 44 57789988888999999999986 367899999998854322222222445555 9999999999999999999
Q ss_pred EeCCCCcccceeeeeccC
Q psy4956 165 VYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~ 182 (361)
.+..|.+..+....++|.
T Consensus 97 ~n~~G~g~~S~~~~~~T~ 114 (132)
T 1x5h_A 97 LTINGTGPATDWLSAETF 114 (132)
T ss_dssp EETTEEEEECCCEEEECC
T ss_pred EcCCccCCCCcCEEeEcC
Confidence 999888766555555553
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.6e-11 Score=86.66 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=67.4
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC---CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS---GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~---~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..|.+|.++.+...+.+++.|+|.+|.. ..+.+|.|+|+..+...|........... .+.+.+|.|++.|.|+|+|
T Consensus 6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~-~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 6 SGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKT-KFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp CCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECCSSCCCSS-EEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEeccccCccC-EEEECCCCCCCEEEEEEEE
Confidence 3578888999999999999999998862 35899999998864433322211122444 8999999999999999999
Q ss_pred EeCCCCccccee
Q psy4956 165 VYDSKESVAYTS 176 (361)
Q Consensus 165 ~~~~~~s~~~~~ 176 (361)
.+..|.+.++..
T Consensus 85 ~n~~G~s~~S~~ 96 (110)
T 2yuw_A 85 VNAAGASEPKYY 96 (110)
T ss_dssp EETTEECCCEEC
T ss_pred EcCCcCCCCcCC
Confidence 999888876443
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-11 Score=88.61 Aligned_cols=93 Identities=18% Similarity=0.189 Sum_probs=69.6
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCC-cccEEEEEEECCCCCCCeEE---eecCCCCceEEEcCCCCCcEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGK-YSGFKLKVISLSEKTPPRII---GFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~-~~~y~v~~~~~~~~~~~~~~---~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
..|.+|.++.+...+.+ +.|+|++|. ++. +.+|+|+|+..+...|.... ......+ .+.|.+|.|++.|.|+
T Consensus 6 ~~P~~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~r 83 (122)
T 2e3v_A 6 SGPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEG-IVTIVGLKPETTYAVR 83 (122)
T ss_dssp CCCCCCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTT-EEEECSCCTTCEEEEE
T ss_pred cCCcCCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccc-eEEeCCCCCCCEEEEE
Confidence 35777888888887777 999999886 344 89999999987654452222 2223455 8999999999999999
Q ss_pred EEEEeCCCCcccceeeeeccC
Q psy4956 162 LFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 162 v~a~~~~~~s~~~~~~~~~t~ 182 (361)
|+|.+..|.+.++....+++.
T Consensus 84 V~A~n~~G~g~~S~~~~~~t~ 104 (122)
T 2e3v_A 84 LAALNGKGLGEISAASEFKTQ 104 (122)
T ss_dssp EEEEETTEECCCCCCEEEECC
T ss_pred EEEEeCCccCCCccccccccc
Confidence 999999988876555555444
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=4e-11 Score=86.04 Aligned_cols=93 Identities=19% Similarity=0.289 Sum_probs=70.8
Q ss_pred CCCCCCccEEE-EEeCCEEEEEeeCCCC---CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 89 PPDPPTNLSVN-VRSGKTAQIFWSPPIS---GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 89 ~~~~p~~l~~~-~~~~~~v~l~W~~p~~---~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.|.+|.++.+. ..+.+++.|+|++|.. ..+.+|.|+++............ ..... .+.+.+|.|++.|.|+|+|
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~-~~~v~~L~p~t~Y~frV~A 94 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-SGATR-EHLCDRLNPGCFYRLRVYC 94 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-CSSCS-EEEECSCCTTSCEEEEEEE
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE-ecccc-EEEECCCCCCCEEEEEEEE
Confidence 47778888877 7789999999998873 25899999998865422222222 23455 8999999999999999999
Q ss_pred EeCCCCcccceeeeeccCC
Q psy4956 165 VYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p 183 (361)
.+..|.+.++....++|.+
T Consensus 95 ~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 95 ISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EETTEECCCCCCCCCCCCC
T ss_pred EcCCccCCCcccEEEEcCC
Confidence 9999888766556666654
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.7e-11 Score=86.42 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=72.2
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCC-CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSY-PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~-~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|.++.+...+.+++.|+|+++. ..+.+.+|.|.|+..+...... +.. ..+.+.|.+|.|++.|.|+|+|
T Consensus 17 ~P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-~~~-----~~~~~~i~~L~p~t~Y~~~V~A 90 (116)
T 1x5g_A 17 LPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQD-VDV-----SSHSYTINGLKKYTEYSFRVVA 90 (116)
T ss_dssp CCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCC-EEE-----CSSEEEECSCCTTCEEEEEEEE
T ss_pred CCcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEE-Eec-----CCceEEEcCCCCCCEEEEEEEE
Confidence 47788999999999999999998774 3378899999998765544322 222 2488999999999999999999
Q ss_pred EeCCCCCCceE-EEEecCCCCC
Q psy4956 261 VSEDEISTPTT-AQYRTIPLRP 281 (361)
Q Consensus 261 ~~~~~~s~~~~-~~~~t~~~~p 281 (361)
++..|.+.... +.+.|.+..|
T Consensus 91 ~n~~G~g~~S~~~~~~T~~~~P 112 (116)
T 1x5g_A 91 YNKHGPGVSTPDVAVRTLSDSG 112 (116)
T ss_dssp ECSSCCCCBCCCCCEECCCSSC
T ss_pred EcCCCcCCCCCCEEEECCCCCC
Confidence 99988776543 4556655444
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-11 Score=88.38 Aligned_cols=83 Identities=18% Similarity=0.342 Sum_probs=67.3
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++++...+ +++.|+|++|. ++.+.+|+|+|+. +........+....+ .+.|.+|.|++.|.|+|+|.+
T Consensus 27 ~P~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~--~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 102 (126)
T 1x5i_A 27 VPEVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGI--GSPHAQTIKVDYKQR-YYTIENLDPSSHYVITLKAFN 102 (126)
T ss_dssp CCCSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECS--SCGGGEEEECCTTCC-EEEECSCCSSCEECCEEEEEC
T ss_pred CCCCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEc--CCCCceEEEeCCCee-EEEEeCCCCCCEEEEEEEEEe
Confidence 57788999999886 99999999986 4678999999974 223344455566666 999999999999999999999
Q ss_pred CCCCcccce
Q psy4956 167 DSKESVAYT 175 (361)
Q Consensus 167 ~~~~s~~~~ 175 (361)
..|.+.++.
T Consensus 103 ~~G~g~~s~ 111 (126)
T 1x5i_A 103 NVGEGIPLY 111 (126)
T ss_dssp SSCBCCCCC
T ss_pred CCccCccee
Confidence 998887644
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=9.2e-12 Score=86.57 Aligned_cols=78 Identities=14% Similarity=0.168 Sum_probs=58.6
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCC-CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEE
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKT 356 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~-~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 356 (361)
+.+|.+|.+ .. ..+++.|+|++|. +.+.+++|.|+|+.. ++.+...........+++++.+ |.||+.|.|||.|
T Consensus 8 ~~pP~~l~v--~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~~~~~~t~~~v~~-L~pg~~Y~FRV~A 82 (108)
T 1v5j_A 8 LSPPRGLVA--VR-TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPAVAGTETELLVPG-LIKDVLYEFRLVA 82 (108)
T ss_dssp CCCCEEEEE--EE-CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEEECSSCCEEECCC-CCTTSCEECCBEE
T ss_pred CCCCcceEE--EE-eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeeecCCCcCEEEeCC-CCCCCEEEEEEEE
Confidence 457888988 54 4678999999985 345899999999984 3233211122345678999996 9999999999999
Q ss_pred EeCC
Q psy4956 357 VSGK 360 (361)
Q Consensus 357 ~~~~ 360 (361)
+++.
T Consensus 83 ~n~~ 86 (108)
T 1v5j_A 83 FAGS 86 (108)
T ss_dssp EETT
T ss_pred EcCC
Confidence 9863
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=5.3e-11 Score=85.43 Aligned_cols=96 Identities=16% Similarity=0.267 Sum_probs=72.8
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCC--CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSY--PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~--~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.++.+.....+++.|.|+++. ..+.+.+|.|.|...+......... .....+.+.+.+|.|++.|.|+|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V 92 (120)
T 1x5f_A 16 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT---SHPGEMQVTIQNLMPATVYIFRV 92 (120)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC---SSTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEEe---ccCCccEEEeCCCCCCCEEEEEE
Confidence 347889999999999999999999875 3378899999998875443332211 13346899999999999999999
Q ss_pred EEEeCCCCCCce-EEEEecCCC
Q psy4956 259 QTVSEDEISTPT-TAQYRTIPL 279 (361)
Q Consensus 259 ~a~~~~~~s~~~-~~~~~t~~~ 279 (361)
+|++..|.+... .+.+.|.+.
T Consensus 93 ~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 93 MAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEECSSCEEEECCCEEEECCCC
T ss_pred EEECCCccCCCCCCEEEEeCCC
Confidence 999998876443 345666544
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=83.38 Aligned_cols=72 Identities=24% Similarity=0.386 Sum_probs=59.7
Q ss_pred cceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 283 SFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 283 ~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.+++ .+++.+++.|+|+++.+ .+++|.|.|.+.+++.. .....+.+..+++.+.+ |.||+.|+|+|.|++++
T Consensus 11 ~l~v--t~vt~~S~~lsW~~p~~--~v~~Y~I~y~~~~g~~~-~~~~~v~g~~~s~~l~~-L~PgT~Y~V~v~a~~~~ 82 (95)
T 2h41_A 11 SESV--TEITASSFVVSWVSASD--TVSGFRVEYELSEEGDE-PQYLDLPSTATSVNIPD-LLPGRKYIVNVYQISED 82 (95)
T ss_dssp TTSC--CCCGGGCEEEECCCSCT--TEEEEEEEEEETTTCCC-CEEEEEETTCCEEEECS-CCTTCEEEEEEEEEETT
T ss_pred EEEE--EEeCCCeEEEEECCCCC--CccEEEEEEEeCCCCCc-ceEEECCCCccEEEECC-CCCCCEEEEEEEEEcCC
Confidence 4566 88999999999999988 89999999999875322 22244567788999996 99999999999999875
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=7.7e-11 Score=83.67 Aligned_cols=93 Identities=19% Similarity=0.145 Sum_probs=70.9
Q ss_pred CCCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCC---ce-eEEeeccCCCCCcEEEecCCCCCCeEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPE---SV-LYVEKEGEPPGPAQAAFKGLVPGRAYN 255 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~ 255 (361)
+.+|.++.+...+.++|.|+|+++. ..+.+.+|.|.|+..+... .. .... ...+.+.|.+|.|++.|.
T Consensus 9 ~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p~t~Y~ 83 (114)
T 1x4y_A 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVE-----GDRYWHSISHLQPETSYD 83 (114)
T ss_dssp CSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEE-----TTCCEEEECSCCTTCEEE
T ss_pred CCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecC-----CcEeEEEcCCCCCCCEEE
Confidence 5678899999999999999999874 3478999999998765431 11 1222 224789999999999999
Q ss_pred EEEEEEeCCCCCCceE-EEEecCCCC
Q psy4956 256 ISVQTVSEDEISTPTT-AQYRTIPLR 280 (361)
Q Consensus 256 v~V~a~~~~~~s~~~~-~~~~t~~~~ 280 (361)
|+|+|++..|.+.... +.+.|.+.+
T Consensus 84 ~~V~A~n~~G~g~~S~~v~~~T~~~~ 109 (114)
T 1x4y_A 84 IKMQCFNEGGESEFSNVMICETKARS 109 (114)
T ss_dssp EEEEEECTTCCCCCCCCEEEECCCCC
T ss_pred EEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 9999999998886554 456665544
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=2.4e-11 Score=87.55 Aligned_cols=100 Identities=12% Similarity=0.202 Sum_probs=73.3
Q ss_pred CC-CCcceEEEeccCCeEEEEeecCCC---CCcceEEEEEEeCCCCCCceeE-EeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 183 PN-TPGKFIVWFRNETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPESVLY-VEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 183 p~-~p~~l~~~~~~~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
|. +|.++.+...+.+++.|+|+++.. .+.+.+|.|.|+..+....... ..........+.+.|.+|.|++.|.|+
T Consensus 15 P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 94 (122)
T 1va9_A 15 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVV 94 (122)
T ss_dssp CSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEE
T ss_pred CCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCCCEEEEE
Confidence 54 788999999999999999998753 4789999999987654322110 001111233578999999999999999
Q ss_pred EEEEeCCCCCCceE-EEEecCCCCCc
Q psy4956 258 VQTVSEDEISTPTT-AQYRTIPLRPL 282 (361)
Q Consensus 258 V~a~~~~~~s~~~~-~~~~t~~~~p~ 282 (361)
|+|.+..|.+.... +.+.|.+.+|.
T Consensus 95 V~A~n~~G~g~~S~~~~~~T~~~~P~ 120 (122)
T 1va9_A 95 VQAFNRAGTGPSSSEINATTLESGPS 120 (122)
T ss_dssp EEEEETTEECCCCCCEECCCCSSCCC
T ss_pred EEEEcCCCCCCCccCEEEEeCCCCCC
Confidence 99999988776543 56677666664
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-11 Score=87.55 Aligned_cols=101 Identities=16% Similarity=0.262 Sum_probs=74.8
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCC---CCCCceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPP---DAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
..|.+|.++.+...+.+++.|.|.++... +.+.+|.|+|+.. ....+...... ........+.+.+|.|++.|.|
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~-~~~~~~~~~~v~~L~p~t~Y~f 94 (124)
T 1wis_A 16 ELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL-SNEPDARSMEVPDLNPFTCYSF 94 (124)
T ss_dssp CCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE-ESCTTCSEEEECSCCTTSEECC
T ss_pred CCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE-ccCCCceEEEeCCCCCCCEEEE
Confidence 34788999999999999999999877433 5689999999873 33333332221 1134458899999999999999
Q ss_pred EEEEEeCCCCCCceE--EEEecCCCCCc
Q psy4956 257 SVQTVSEDEISTPTT--AQYRTIPLRPL 282 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~--~~~~t~~~~p~ 282 (361)
+|.|.|..|.+.+.. ..+.|.+.+|.
T Consensus 95 rV~A~N~~G~s~~S~~~~~~~T~~~~P~ 122 (124)
T 1wis_A 95 RMRQVNIVGTSPPSQPSRKIQTLQSGPS 122 (124)
T ss_dssp CCEEECSSCBCCCCCCCCCEECCCSSCC
T ss_pred EEEEEECCccCCCcCCccceEcCCCCCC
Confidence 999999998886654 34666666664
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=88.99 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=71.8
Q ss_pred CCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|.............. .......+.+.+|.|++.|.|+|+|.+
T Consensus 20 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~n 97 (121)
T 2dlh_A 20 SAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKH--NVADSQITTIGNLVPQKTYSVKVLAFT 97 (121)
T ss_dssp SCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCC--CCSSCSEECCBSCCSSCEEEEEEEEEE
T ss_pred CCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEE--ecCCceEEEecCCCCCCEEEEEEEEEe
Confidence 4788999988899999999988743 3778999999987644321110000 122357899999999999999999999
Q ss_pred CCCCCCce-EEEEecCCCCCc
Q psy4956 263 EDEISTPT-TAQYRTIPLRPL 282 (361)
Q Consensus 263 ~~~~s~~~-~~~~~t~~~~p~ 282 (361)
..|.+... .+.+.|.+..|.
T Consensus 98 ~~G~g~~S~~~~~~T~~~~P~ 118 (121)
T 2dlh_A 98 SIGDGPLSSDIQVITQTGSGP 118 (121)
T ss_dssp SSCBCCCCCCEEEECCCCCSC
T ss_pred CCccCCCCCCEEEECCCCCCC
Confidence 98887665 466777666653
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-11 Score=85.79 Aligned_cols=97 Identities=14% Similarity=0.177 Sum_probs=69.7
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-Cc-ceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.++.+...+.+ +.|+|++|... |. +.+|.|.|+..+...+.............+.+.+.+|.|++.|.|+|
T Consensus 5 ~~P~~P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV 83 (105)
T 2haz_A 5 DTPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL 83 (105)
T ss_dssp CCCCCCEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEE
T ss_pred CCCcCCCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEE
Confidence 34777899999888888 99999987533 55 89999999987654332111110001124789999999999999999
Q ss_pred EEEeCCCCCCceE-EEEecCC
Q psy4956 259 QTVSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 259 ~a~~~~~~s~~~~-~~~~t~~ 278 (361)
+|.|..|.+.++. ..+.|.|
T Consensus 84 ~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 84 AALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEETTEECCCCCCEEEECCC
T ss_pred EEEcCCccCCCcCCEeeEEec
Confidence 9999988876554 3455544
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=5e-12 Score=88.12 Aligned_cols=91 Identities=19% Similarity=0.356 Sum_probs=71.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCC----CCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPP----ISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p----~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
+|.+|.++.+...+.+++.|+|++| .++.+.+|.|+|+..+.. ....+..... .+.|.+|.|++.|.|+|+|
T Consensus 8 pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~---~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A 83 (103)
T 2edy_A 8 PSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQ---QELQNITTDT-RFTLTGLKPDTTYDIKVRA 83 (103)
T ss_dssp CSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSC---CEEEEEESSS-CCEECSCCTTCCEEEECCE
T ss_pred CCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCC---ccEEEcCCcc-eEEEcCCCCCCEEEEEEEE
Confidence 4567888988888899999999998 257789999999886542 2233344455 8999999999999999999
Q ss_pred EeCCCCcccceeeeeccCC
Q psy4956 165 VYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p 183 (361)
.+..|.+..+....++|.|
T Consensus 84 ~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 84 WTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp ECSSCBCCCCCCCCCCCCC
T ss_pred ECCCCCCCCCCCEEEEecc
Confidence 9999888766556666653
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=4e-10 Score=89.77 Aligned_cols=165 Identities=14% Similarity=0.095 Sum_probs=109.9
Q ss_pred eEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEee--cCccceEEecCCC--CCceEEEEEEEecCCcCccceeeEEE
Q psy4956 11 ANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVS--RDIKDNIEFSEGL--PGTKYDFYLYYTNSTVHDWLTWTASI 86 (361)
Q Consensus 11 ~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~--p~t~Y~i~V~a~~~~~~~~~~~~~~~ 86 (361)
..|.|+.|....+....|.|+|....... ...++. .-..+.+.|+++. +...|.++|+|..+.+.+.-.....+
T Consensus 24 ~iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~--W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A~~g~~~S~w~~~~~F 101 (221)
T 4doh_R 24 NVLQWTPPEGLQGVKVTYTVQYFIYGQKK--WLNKSECRNINRTYCDLSAETSDYEHQYYARVRAIWGTKCSKWAESGRF 101 (221)
T ss_dssp EEEEEECCCCSSCCCCEEEEEEEETTSCC--CEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEEESSSCBCCCEECCCB
T ss_pred EEEEEcCCCCCCCCCeEEEEEEEECCCCC--ceecccccCCCCCEEeCCCccccCCCCEEEEEEEEcCCcccCCEecCce
Confidence 45888887766678899999998732222 233222 2236789999875 56789999999987633332222233
Q ss_pred ----ecCCCCCCccEEEEEeCCEEEEEeeCCCC------CC---------cccEEEEEEECCCCCCCeEEeecCCCCceE
Q psy4956 87 ----TTPPDPPTNLSVNVRSGKTAQIFWSPPIS------GK---------YSGFKLKVISLSEKTPPRIIGFTENPPAGY 147 (361)
Q Consensus 87 ----~t~~~~p~~l~~~~~~~~~v~l~W~~p~~------~~---------~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (361)
.+.+.||. +.+. ..+.++.|.|.+|.. +. ...|+|.|+..+.... ... ..... .+
T Consensus 102 ~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~-~~~--~~~~~-~~ 175 (221)
T 4doh_R 102 YPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT-WSQ--CVTNH-TL 175 (221)
T ss_dssp CHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE-EEE--EECSS-EE
T ss_pred echhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE-EEE--eecCc-EE
Confidence 34567775 7776 467899999998762 11 2479999998643211 112 22334 89
Q ss_pred EEcCCCCCcEEEEEEEEEeC--CCCcccceeeeeccCC
Q psy4956 148 SLKDLTPGGSYQVQLFSVYD--SKESVAYTSRNFTTKP 183 (361)
Q Consensus 148 ~l~~L~p~~~Y~v~v~a~~~--~~~s~~~~~~~~~t~p 183 (361)
.|.+|.|++.|.|+|+|... .+.+..+....+.|..
T Consensus 176 ~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~ 213 (221)
T 4doh_R 176 VLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLK 213 (221)
T ss_dssp EECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCC
T ss_pred EEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCC
Confidence 99999999999999999864 4556555556666654
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=2.9e-11 Score=86.67 Aligned_cols=88 Identities=20% Similarity=0.299 Sum_probs=68.8
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCc--eeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPES--VLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
.|.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|...+.... .... ....+.+.|.+|.|++.|.|+|
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~t~Y~~~V 91 (119)
T 1wfn_A 17 VPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYL-----PNVTLEYRVTGLTALTTYTIEV 91 (119)
T ss_dssp SCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEE-----CSSCCEEEEESCCTTCEEEEEE
T ss_pred CCCCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEEEe-----CCCceEEEEcCCCCCCEEEEEE
Confidence 377888999999999999999987643 3778999999987654321 1112 2345889999999999999999
Q ss_pred EEEeCCCCCCceEEEE
Q psy4956 259 QTVSEDEISTPTTAQY 274 (361)
Q Consensus 259 ~a~~~~~~s~~~~~~~ 274 (361)
+|.+..|.+.......
T Consensus 92 ~A~n~~G~g~~S~~~~ 107 (119)
T 1wfn_A 92 AAMTSKGQGQVSASTI 107 (119)
T ss_dssp EEECSSCEEEEEEEEE
T ss_pred EEEcCCccCCCCCCEE
Confidence 9999999887666543
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=2.5e-11 Score=86.18 Aligned_cols=96 Identities=15% Similarity=0.205 Sum_probs=69.3
Q ss_pred ecCCCCCCccEEEEEeCCEEEEEeeCCCCC------C-cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEE
Q psy4956 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISG------K-YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQ 159 (361)
Q Consensus 87 ~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~------~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 159 (361)
..+|.+|..+.+..++.+++.|+|++|.+. . +.+|.|+ +........... .....+ .+++.+|.|++.|.
T Consensus 13 ~~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve-~~~~~~~~~~~v-~~~~~t-~~~v~gL~p~t~Y~ 89 (120)
T 1wfu_A 13 VVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE-EEDPKMHSYGVI-YTGYAT-RHVVEGLEPRTLYK 89 (120)
T ss_dssp CCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEE-EECTTTCCEEEE-EEESCS-EEEEESCCTTCEEE
T ss_pred eCCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEE-EecCCCCceEEE-ecCCcc-EEEECCCCCCCEEE
Confidence 345666666667778899999999998742 2 7899999 432222222222 223345 89999999999999
Q ss_pred EEEEEEeCCCCcccceeeeeccCCCC
Q psy4956 160 VQLFSVYDSKESVAYTSRNFTTKPNT 185 (361)
Q Consensus 160 v~v~a~~~~~~s~~~~~~~~~t~p~~ 185 (361)
|+|+|.+..|.+.++....++|.+.+
T Consensus 90 frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 90 FRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEEEECCCCCCCCCccEeeEcCCCC
Confidence 99999999999877666677776543
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.8e-11 Score=83.85 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=70.9
Q ss_pred cCCCCCcceEEEe--ccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 181 TKPNTPGKFIVWF--RNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 181 t~p~~p~~l~~~~--~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
..|.+|.++.+.. .+.+++.|+|+++.. .+.+.+|.|.|+..+...+... ... .+.+.+.+|.|++.|.|+
T Consensus 6 ~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~-----~~~~~l~~L~p~t~Y~~~ 79 (108)
T 2dm4_A 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ-RAA-----SNFTEIKNLLVNTLYTVR 79 (108)
T ss_dssp CCTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE-EES-----SSEEEECSCCSSCEEEEE
T ss_pred CCCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe-cCC-----ccEEEeCCCCCCCEEEEE
Confidence 3477899998876 578899999998743 3678999999988765444332 222 379999999999999999
Q ss_pred EEEEeCCCCCCceE-EEEecCCCCC
Q psy4956 258 VQTVSEDEISTPTT-AQYRTIPLRP 281 (361)
Q Consensus 258 V~a~~~~~~s~~~~-~~~~t~~~~p 281 (361)
|+|++..|.+..+. +.+.|.+..|
T Consensus 80 V~A~n~~G~g~~S~~~~~~T~~~~P 104 (108)
T 2dm4_A 80 VAAVTSRGIGNWSDSKSITTIKGSG 104 (108)
T ss_dssp EEEEESSCEEEECCCEEEECCSCSS
T ss_pred EEEECCCceeCCCCCEEEECCCCCC
Confidence 99999988775443 4455644443
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=4.4e-11 Score=84.04 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=71.0
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCc-eeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPES-VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.+|.++.+...+.+++.|+|+++... +.+.+|.|.|...+.... ...... ..+.+.|.+|.|++.|.|+|+
T Consensus 7 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-----~~~~~~l~~L~p~t~Y~~~V~ 81 (108)
T 2djs_A 7 GPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARS-----QTNTARIDGLRPGMVYVVQVR 81 (108)
T ss_dssp CCCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEE-----SSSEEEEESCCTTCEEEEEEE
T ss_pred CCCCCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEEec-----CccEEEEcCCCCCCEEEEEEE
Confidence 4778899999999999999999887433 778999999987655332 222222 248899999999999999999
Q ss_pred EEeCCCCCCce-EEEEecCCC
Q psy4956 260 TVSEDEISTPT-TAQYRTIPL 279 (361)
Q Consensus 260 a~~~~~~s~~~-~~~~~t~~~ 279 (361)
|++..|.+..+ .+.+.|.+.
T Consensus 82 A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 82 ARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEESSCEEEECCCEEEECCCS
T ss_pred EEeCCEECCCCCCEEEEeCCC
Confidence 99998877553 345566543
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.6e-11 Score=84.08 Aligned_cols=92 Identities=21% Similarity=0.295 Sum_probs=69.9
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCC--CCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDA--PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
.|.+|.++.+...+.+++.|+|+++... +.+.+|.|.|+..+. .......... .+.+.|.+|.|++.|.|+|
T Consensus 7 ~P~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~-----~~~~~i~~L~p~t~Y~~~V 81 (109)
T 2e7h_A 7 GPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTS-----ENRAELRGLKRGASYLVQV 81 (109)
T ss_dssp SSCCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEES-----SSEEEEESCCTTSCEEEEE
T ss_pred CCCCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEccC-----CCEEEECCCCCCCeEEEEE
Confidence 4778899999999999999999887433 779999999987652 2222222222 3789999999999999999
Q ss_pred EEEeCCCCCCceE-EEEecCC
Q psy4956 259 QTVSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 259 ~a~~~~~~s~~~~-~~~~t~~ 278 (361)
+|.+..|.+..+. +.+.|.+
T Consensus 82 ~A~n~~G~g~~S~~~~~~T~~ 102 (109)
T 2e7h_A 82 RARSEAGYGPFGQEHHSQTQL 102 (109)
T ss_dssp EEECSSCBCCCCSCEECCCCC
T ss_pred EEEeCCccCCCCCCEEEEcCC
Confidence 9999988776543 4555654
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.1e-11 Score=84.75 Aligned_cols=97 Identities=12% Similarity=0.120 Sum_probs=73.7
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|++|..+.+. .+.+++.|.|.++.+ ...+.+|.|.|+..+...+...... ++..+.+.|.+|.|++.|.|+|.|
T Consensus 8 ~P~pP~~~~~~-~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~---~~~~~~~~l~~L~p~t~Y~frV~A 83 (114)
T 2kbg_A 8 EPSPPSIHGQP-SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKV---QGNKDHIILEHLQWTMGYEVQITA 83 (114)
T ss_dssp CCCSCCEECCB-CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEE---ETTTCCEEECCCCTTCCEEEEEEE
T ss_pred CccCCcccccc-cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEc---CCCcCEEEEcCCCCCCEEEEEEEE
Confidence 57777665544 688899999987532 2678999999998755443322211 234578999999999999999999
Q ss_pred EeCCCCCCceEEEEecCCCCCc
Q psy4956 261 VSEDEISTPTTAQYRTIPLRPL 282 (361)
Q Consensus 261 ~~~~~~s~~~~~~~~t~~~~p~ 282 (361)
.|..|.|.++...+.|...+|.
T Consensus 84 ~N~~G~s~pS~~~~~T~~~~~~ 105 (114)
T 2kbg_A 84 ANRLGYSEPTVYEFSMPPKPNI 105 (114)
T ss_dssp ECTTSCEEEEEEEECCCCCCSS
T ss_pred EeCCcCcCCcCCEEEcCCCCce
Confidence 9999999999888888766653
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-11 Score=86.43 Aligned_cols=94 Identities=17% Similarity=0.217 Sum_probs=69.4
Q ss_pred CCCCcceEEE-eccCCeEEEEeecCCCC--CcceEEEEEEeCCCC-CCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 183 PNTPGKFIVW-FRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 183 p~~p~~l~~~-~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
|.+|.++.+. ..+.+++.|+|+++... ..+.+|.|+++.... ..+..... ...+.+.+.+|.|++.|.|+|
T Consensus 18 P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~~v~~L~p~t~Y~frV 92 (120)
T 2crm_A 18 PGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS-----GATREHLCDRLNPGCFYRLRV 92 (120)
T ss_dssp CCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC-----SSCSEEEECSCCTTSCEEEEE
T ss_pred CCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEEe-----ccccEEEECCCCCCCEEEEEE
Confidence 6778887776 77889999999987544 368999999987654 23433322 235789999999999999999
Q ss_pred EEEeCCCCCCceE-EEEecCCCCC
Q psy4956 259 QTVSEDEISTPTT-AQYRTIPLRP 281 (361)
Q Consensus 259 ~a~~~~~~s~~~~-~~~~t~~~~p 281 (361)
+|.|..|.+.+.. +.+.|.+.+|
T Consensus 93 ~A~n~~G~s~~S~~~~~~T~~~~p 116 (120)
T 2crm_A 93 YCISDGGQSAVSESLLVQTPAVSG 116 (120)
T ss_dssp EEEETTEECCCCCCCCCCCCCCSC
T ss_pred EEEcCCccCCCcccEEEEcCCCCC
Confidence 9999988776553 3445544433
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-11 Score=84.01 Aligned_cols=97 Identities=14% Similarity=0.218 Sum_probs=72.9
Q ss_pred cCCCCCcceEE-EeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 181 TKPNTPGKFIV-WFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 181 t~p~~p~~l~~-~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
..|.+|.++.+ ...+.+++.|.|+++..+ +.+.+|.|+++......+....... .+.+.+.+|.|++.|.|+
T Consensus 7 ~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-----~~~~~v~~L~p~t~Y~fr 81 (110)
T 2crz_A 7 GPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGS-----EVECTVSSLLPGKTYSFR 81 (110)
T ss_dssp CCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEEES-----CSEEEEESCCTTCEEEEC
T ss_pred CCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEeCC-----cEEEEECCcCCCCEEEEE
Confidence 34788889888 467778999999766432 5689999999976555554443322 488999999999999999
Q ss_pred EEEEeCCCCCCceE-EEEecCCCCCc
Q psy4956 258 VQTVSEDEISTPTT-AQYRTIPLRPL 282 (361)
Q Consensus 258 V~a~~~~~~s~~~~-~~~~t~~~~p~ 282 (361)
|+|.|..|.+.++. ..+.|.+.+|.
T Consensus 82 V~A~n~~G~g~~S~~~~~~T~~~~P~ 107 (110)
T 2crz_A 82 LRAANKMGFGPFSEKCDITTAPGSGP 107 (110)
T ss_dssp CEEECSSCBCCCCCCEEEECCCSCCC
T ss_pred EEEEcCCccCCCCCccccccCCCCCC
Confidence 99999988876553 45566666553
|
| >2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-09 Score=89.71 Aligned_cols=225 Identities=11% Similarity=0.019 Sum_probs=131.9
Q ss_pred cceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCC--CCCCcc----EEEEEeCCEEEEEeeCCCCCCcccEEEE
Q psy4956 51 KDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPP--DPPTNL----SVNVRSGKTAQIFWSPPISGKYSGFKLK 124 (361)
Q Consensus 51 ~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~--~~p~~l----~~~~~~~~~v~l~W~~p~~~~~~~y~v~ 124 (361)
...+.|.++.......+++.+.+..+..+....+.+...| ..|..+ .+.......+.|........ .-.+.
T Consensus 61 ~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~i~ 137 (305)
T 2nzi_A 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP---DPVIT 137 (305)
T ss_dssp EEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEES---CCEEE
T ss_pred EEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCC---CCEEE
Confidence 4588999988876655555666655333333333332211 112110 11122234455544321100 01344
Q ss_pred EEECCCC---CCCeEEeecCCCCceEEEcC-CCCCcEEEEEEEEEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEE
Q psy4956 125 VISLSEK---TPPRIIGFTENPPAGYSLKD-LTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLL 200 (361)
Q Consensus 125 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~-L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~ 200 (361)
|...+.. ............. .+.+.+ +.+...+.+++.|.+..|.............|.+|.++.+.....+++.
T Consensus 138 W~~~~~~~~~~~~~~~~~~~~~~-~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~ 216 (305)
T 2nzi_A 138 WQKGQDLIDNNGHYQVIVTRSFT-SLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVN 216 (305)
T ss_dssp EEESSSBCCSSSSCEEEECSSEE-EEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEE
T ss_pred EEECCEECCCCCcEEEEEcCCce-EEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEE
Confidence 4432211 1111111122223 677887 8888888889999998877655445555667888999999888999999
Q ss_pred EEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEE--EEec
Q psy4956 201 VLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTA--QYRT 276 (361)
Q Consensus 201 v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~--~~~t 276 (361)
|.|.++... ..+..|.+.+.+.....+....... ...+.+.+|.+++.|.|++.|.|..|.+.++.. ...+
T Consensus 217 l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~-----~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t 291 (305)
T 2nzi_A 217 LTWTEPASDGGSKITNYIVEKCATTAERWLRVGQAR-----ETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTIT 291 (305)
T ss_dssp EEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEES-----SSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEEC
T ss_pred EEEcCCccCCCCceeEEEEEEecCCCCccEECcccc-----CceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEc
Confidence 999876433 3578999999887655544333222 478999999999999999999999887765442 2345
Q ss_pred CCCCCccc
Q psy4956 277 IPLRPLSF 284 (361)
Q Consensus 277 ~~~~p~~l 284 (361)
.+.+|..+
T Consensus 292 ~~~~p~~~ 299 (305)
T 2nzi_A 292 KEDKTRAM 299 (305)
T ss_dssp CC------
T ss_pred CCcccccc
Confidence 55555433
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.2e-11 Score=84.01 Aligned_cols=96 Identities=16% Similarity=0.218 Sum_probs=73.8
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
..|.+|.++.+...+.+++.|+|+++.. .+.+.+|.|+|+..+........ ........+.+.+|.|++.|.|+|+
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~~V~ 92 (119)
T 2ed7_A 16 VLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN---TTQPGSLQLTVGNLKPEAMYTFRVV 92 (119)
T ss_dssp SSCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE---CCCTTCCEEEECSCCSSSEEEECCE
T ss_pred CCCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE---eecCCceEEEeCCCCCCCEEEEEEE
Confidence 3478999999999999999999988743 36789999999876554433221 1134468899999999999999999
Q ss_pred EEeCCCCCCceE-EEEecCCC
Q psy4956 260 TVSEDEISTPTT-AQYRTIPL 279 (361)
Q Consensus 260 a~~~~~~s~~~~-~~~~t~~~ 279 (361)
|++..|.+.+.. +.+.|.+.
T Consensus 93 A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 93 AYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEESSCBCSCCCCEEEECCCC
T ss_pred EEcCCccCCCcCCEEEEeCCC
Confidence 999998876554 45566554
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=7.4e-11 Score=83.80 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=70.5
Q ss_pred CCCCcceEEEec--cCCeEEEEeecCCCC-CcceEEEEEEeCCCCCC---ceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 183 PNTPGKFIVWFR--NETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPE---SVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 183 p~~p~~l~~~~~--~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
|.+|.++.+... +.+++.|+|+++... +.+.+|.|.|....... +..... ....+.+.|.+|.|++.|.|
T Consensus 9 ~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~ 84 (114)
T 2ede_A 9 TSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETI----SGDRLTHQIMDLNLDTMYYF 84 (114)
T ss_dssp CSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEE----ETTCCEEEECSCCSSCEEEE
T ss_pred CCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEE----CCCceEEEEcCCCCCCEEEE
Confidence 478999999887 778999999987433 67899999998754422 111111 23358899999999999999
Q ss_pred EEEEEeCCCCCCceE-EEEecCCCCC
Q psy4956 257 SVQTVSEDEISTPTT-AQYRTIPLRP 281 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~-~~~~t~~~~p 281 (361)
+|+|.+..|.+..+. +.+.|.+.+|
T Consensus 85 ~V~A~n~~G~g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 85 RIQARNSKGVGPLSDPILFRTLKVSG 110 (114)
T ss_dssp EEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEEEeCCcCcCCcccEEEEecCCCC
Confidence 999999988776543 4566655544
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.26 E-value=4.6e-11 Score=87.34 Aligned_cols=92 Identities=22% Similarity=0.375 Sum_probs=68.8
Q ss_pred CC-CCcceEEEeccCCeEEEEeecCCC---CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 183 PN-TPGKFIVWFRNETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 183 p~-~p~~l~~~~~~~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
|. +|.++.+...+.+++.|+|+++.. .+.+.+|.|.|+..+.... ..........+.+.|.+|.|++.|.|+|
T Consensus 18 P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 94 (132)
T 1x5h_A 18 PSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSD---VTETLVSGTQLSQLIEGLDRGTEYNFRV 94 (132)
T ss_dssp CCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEE---EECCBCCTTCCEEEEECCCSSCEEEEEC
T ss_pred CCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCc---cEEEEeCCCccEEEeCCCCCCCEEEEEE
Confidence 54 678999999999999999998753 4789999999987543221 1111124556899999999999999999
Q ss_pred EEEeCCCCCCceE-EEEecC
Q psy4956 259 QTVSEDEISTPTT-AQYRTI 277 (361)
Q Consensus 259 ~a~~~~~~s~~~~-~~~~t~ 277 (361)
+|.+..|.+..+. +.+.|.
T Consensus 95 ~A~n~~G~g~~S~~~~~~T~ 114 (132)
T 1x5h_A 95 AALTINGTGPATDWLSAETF 114 (132)
T ss_dssp EEEETTEEEEECCCEEEECC
T ss_pred EEEcCCccCCCCcCEEeEcC
Confidence 9999988765443 445553
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=6.4e-11 Score=83.68 Aligned_cols=98 Identities=18% Similarity=0.136 Sum_probs=70.5
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-Cc----ceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SI----YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~----~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~ 255 (361)
..|.+|.+|++...+.++|.|+|.++... +. +.+|.|.|+............ ....+.+.|.+|+|++.|.
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~----~~~~~~~~i~gL~P~T~Y~ 82 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA----NATTLSYLVTGLKPNTLYE 82 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEEC----CBCSSEEEEESCCTTCEEC
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEE----ecCcCEEEeCCCCCCcEEE
Confidence 44678999999999999999999876422 33 349999998732222111111 1235789999999999999
Q ss_pred EEEEEEeCCCCCCce-EEEEecCCC-CCc
Q psy4956 256 ISVQTVSEDEISTPT-TAQYRTIPL-RPL 282 (361)
Q Consensus 256 v~V~a~~~~~~s~~~-~~~~~t~~~-~p~ 282 (361)
|+|+|.+..|.+... .+.++|.+. +|.
T Consensus 83 f~V~A~~~~G~g~~S~~v~~~T~~~~~Ps 111 (113)
T 1x5j_A 83 FSVMVTKGRRSSTWSMTAHGTTFELSGPS 111 (113)
T ss_dssp CEEEEECSSCBCCCCCCCCEECCCSSCCC
T ss_pred EEEEEecCCccCCCcccEEeeccCCCCCC
Confidence 999999988877554 345677666 663
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-10 Score=86.36 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=82.8
Q ss_pred eEEEcCCCCCcEEEEEEEEEeCC-CCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC
Q psy4956 146 GYSLKDLTPGGSYQVQLFSVYDS-KESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA 224 (361)
Q Consensus 146 ~~~l~~L~p~~~Y~v~v~a~~~~-~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~ 224 (361)
++.+.+++ |..|.|......-. +.+ ..-...|.||.+|++..++.+++.|+|++|.....+.+|+|.+...
T Consensus 119 s~~vgdg~-g~~~~~~~~~k~v~i~~~-----tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~GI~gY~ly~~g~-- 190 (238)
T 2w1n_A 119 NSSVGDGE-GLVHEIAGTEKTVNIIEG-----TSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYKDGK-- 190 (238)
T ss_dssp EEEEECTT-SCEEECBCEEEEEEEECC-----CCCCCCCCCCEEEEEEEECSSCEEEEEECCSCCTTEEEEEEEETTE--
T ss_pred eEEEecCC-CcEEEeeccceeeeeccC-----CCCcCccCCCCceEEEEccCCeEEEEecCCCCCCCceeEEEEeCCc--
Confidence 89999999 99999877533211 000 0011236789999999999999999999886544499999987651
Q ss_pred CCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCc-eEEEEec
Q psy4956 225 PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP-TTAQYRT 276 (361)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~-~~~~~~t 276 (361)
..... +...+++.+.+|+|+|.|.|+|.|.+..|.... ..+.++|
T Consensus 191 --~v~~v-----~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrT 236 (238)
T 2w1n_A 191 --KVAEI-----GKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRT 236 (238)
T ss_dssp --EEEEE-----ETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEEC
T ss_pred --eeEEe-----eccceEEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEe
Confidence 11112 233489999999999999999999998876533 3444444
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=5.9e-11 Score=85.31 Aligned_cols=105 Identities=14% Similarity=0.252 Sum_probs=76.2
Q ss_pred eeeeeccCCCCCcce--EEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCC
Q psy4956 175 TSRNFTTKPNTPGKF--IVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251 (361)
Q Consensus 175 ~~~~~~t~p~~p~~l--~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 251 (361)
......+.|.+|.++ .+...+.+++.|+|.++... +.+.+|.|+++..+ ..+.... .......+.+.+.+|.|+
T Consensus 10 ~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~--~~~~~~~~~~~v~~L~p~ 86 (121)
T 1wf5_A 10 AHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLL--ASVDPKATSVTVKGLVPA 86 (121)
T ss_dssp CCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEE--SSCCTTCCEEEEESCCTT
T ss_pred EEEEEeeCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeE--cccCCCccEEEECCcCCC
Confidence 344455678899999 78888889999999877432 56899999998865 2332211 112345688999999999
Q ss_pred CeEEEEEEEEeCCCCCCceEE--EEecCCCCCc
Q psy4956 252 RAYNISVQTVSEDEISTPTTA--QYRTIPLRPL 282 (361)
Q Consensus 252 t~Y~v~V~a~~~~~~s~~~~~--~~~t~~~~p~ 282 (361)
+.|.|+|+|.|..|.+.+... .+.+.+.+|.
T Consensus 87 t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P~ 119 (121)
T 1wf5_A 87 RSYQFRLCAVNDVGKGQFSKDTERVSLPESGPS 119 (121)
T ss_dssp CEEEEEEEEEESSCEEEECCCCSCEECCCCSSC
T ss_pred CEEEEEEEEEcCCccCCCcCCcceeEcCCCCCC
Confidence 999999999999887755543 3555555553
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.25 E-value=9.8e-11 Score=81.96 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=73.1
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCC-ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
..|.+|.++.+...+.+++.|+|+++ ..+.+.+|.|+|+...... +.. +. ....+.+.+.+|.|++.|.|+|+
T Consensus 6 ~~P~~P~~~~~~~~~~~sv~l~W~~~-~~~~i~~Y~v~~~~~~~~~~~~~-~~----~~~~~~~~i~~L~p~t~Y~~~V~ 79 (106)
T 2dju_A 6 SGPKPPIDLVVTETTATSVTLTWDSG-NSEPVTYYGIQYRAAGTEGPFQE-VD----GVATTRYSIGGLSPFSEYAFRVL 79 (106)
T ss_dssp CSCCCCEEEEEEEEETTEEEEEEECC-CSSCCSEEEEEEEETTCCSCCCC-BC----CCCSSEEEEESCCTTCEEEEEEE
T ss_pred cCCcCCCCcEEEeccCCEEEEEEcCC-CCCCceEEEEEEEECCCCCCeEE-cc----CCCccEEEEeCCCCCcEEEEEEE
Confidence 45788999999999999999999987 3477899999998765432 221 11 22357899999999999999999
Q ss_pred EEeCCCCCCceE-EEEecCCCCCc
Q psy4956 260 TVSEDEISTPTT-AQYRTIPLRPL 282 (361)
Q Consensus 260 a~~~~~~s~~~~-~~~~t~~~~p~ 282 (361)
|.+..|.+.++. +.+.|.+.+|.
T Consensus 80 A~n~~G~~~~S~~~~~~T~~~~P~ 103 (106)
T 2dju_A 80 AVNSIGRGPPSEAVRARTGEQSGP 103 (106)
T ss_dssp EECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEeCCccCCCcccEEeEcCCCCCC
Confidence 999988776543 45666665553
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-10 Score=83.92 Aligned_cols=89 Identities=20% Similarity=0.343 Sum_probs=67.6
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCC-CCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPD-APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.++.+...+.+++.|.|.++... +.+.+|.|+|+... ...+...... .....+.+.+.+|.|++.|.|+|
T Consensus 16 ~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~--~~~~~~~~~v~~L~p~t~Y~frV 93 (121)
T 1x4z_A 16 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA--IPPSRLSVEITGLEKGISYKFRV 93 (121)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE--ECTTCCEEEEESCCTTCEEEEEE
T ss_pred CCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc--cCCCcCEEEECCCCCCCEEEEEE
Confidence 34888999999999999999999975433 45899999998765 3333322211 12345889999999999999999
Q ss_pred EEEeCCCCCCceE
Q psy4956 259 QTVSEDEISTPTT 271 (361)
Q Consensus 259 ~a~~~~~~s~~~~ 271 (361)
+|.|..|.+.+..
T Consensus 94 ~A~n~~G~s~~S~ 106 (121)
T 1x4z_A 94 RALNMLGESEPSA 106 (121)
T ss_dssp EEEETTEECCCCC
T ss_pred EEEcCCCcCCCcC
Confidence 9999988765543
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=5.3e-11 Score=85.90 Aligned_cols=91 Identities=14% Similarity=0.179 Sum_probs=68.3
Q ss_pred CCCccEEE-EEeCCEEEEEeeCC--C--CCCcccEEEEEEECCCCC-CCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 92 PPTNLSVN-VRSGKTAQIFWSPP--I--SGKYSGFKLKVISLSEKT-PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 92 ~p~~l~~~-~~~~~~v~l~W~~p--~--~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
+|.++.+. ..+.+++.|+|++| . ++.+.+|+|.|+...... ......+..... .+.|.+|.|++.|.|+|+|.
T Consensus 21 ~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A~ 99 (124)
T 2dbj_A 21 APLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGS-RARISVQVHNATCTVRIAAV 99 (124)
T ss_dssp CCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTS-CEEEECCCSSSEEEECEEEE
T ss_pred CCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcc-eEEecCCCCCCEEEEEEEEE
Confidence 67788887 47789999999998 3 567999999997432211 111122345555 89999999999999999999
Q ss_pred eCCCCcccceeeeeccCC
Q psy4956 166 YDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~p 183 (361)
+..|.+..+....++|.+
T Consensus 100 n~~G~Gp~S~~~~~~T~~ 117 (124)
T 2dbj_A 100 TRGGVGPFSDPVKIFIPA 117 (124)
T ss_dssp ESSCBCCCCCCEEEECCC
T ss_pred CCCccCCCCCCEEEEcCC
Confidence 999988766666666654
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-10 Score=80.73 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=64.0
Q ss_pred CCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCC---Cce-eEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAP---ESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.+|.++.+...+.+++.|+|+++. ..+.+.+|.|.|+..+.. ... ..+. ...+.+.+.+|+|++.|.|
T Consensus 6 ~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~-----~~~~~~~l~~L~p~t~Y~v 80 (102)
T 3n1f_C 6 TGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVE-----GSKQWHMIGHLQPETSYDI 80 (102)
T ss_dssp SCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEE-----TTCSEEEECSCCTTCEEEE
T ss_pred CCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEc-----CCceEEECCCCCCCCEEEE
Confidence 468899999999999999999874 348899999999976543 111 2222 2346899999999999999
Q ss_pred EEEEEeCCCCCCce
Q psy4956 257 SVQTVSEDEISTPT 270 (361)
Q Consensus 257 ~V~a~~~~~~s~~~ 270 (361)
+|+|++..|.++.+
T Consensus 81 ~V~A~n~~G~G~~S 94 (102)
T 3n1f_C 81 KMQCFNEGGESEFS 94 (102)
T ss_dssp EEEEEETTEECCCC
T ss_pred EEEEECCCcCCCCC
Confidence 99999998877554
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=8.8e-11 Score=84.72 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=66.7
Q ss_pred CC-CCcceEEE-eccCCeEEEEeecC--C-CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 183 PN-TPGKFIVW-FRNETTLLVLWQPS--Y-PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 183 p~-~p~~l~~~-~~~~~~~~v~W~~~--~-~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
|. +|.++.+. ..+.+++.|+|+++ . ..+.+.+|.|.|.............. .....+.+.|.+|.|++.|.|+
T Consensus 18 P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~~l~~L~p~t~Y~~~ 95 (124)
T 2dbj_A 18 PSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEE--VGQNGSRARISVQVHNATCTVR 95 (124)
T ss_dssp CCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEE--EESTTSCEEEECCCSSSEEEEC
T ss_pred CCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEE--eCCCcceEEecCCCCCCEEEEE
Confidence 44 78889988 57889999999987 2 23789999999964322211111110 1233578999999999999999
Q ss_pred EEEEeCCCCCCceE-EEEecCCC
Q psy4956 258 VQTVSEDEISTPTT-AQYRTIPL 279 (361)
Q Consensus 258 V~a~~~~~~s~~~~-~~~~t~~~ 279 (361)
|+|++..|.++.+. +.+.|.+.
T Consensus 96 V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 96 IAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp EEEEESSCBCCCCCCEEEECCCS
T ss_pred EEEECCCccCCCCCCEEEEcCCC
Confidence 99999998876544 45555443
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-10 Score=81.96 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=72.1
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-C-cceEEEEEEeCCCCC-CceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-S-IYTHYKVSIDPPDAP-ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~-~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
..|.+|..+.+...+.+++.|+|.++... + .+.+|.|+|+..+.. ......... .+.+.+.+|.|++.|.|+
T Consensus 6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-----~~~~~v~~L~p~t~Y~fr 80 (109)
T 1x5x_A 6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGE-----DLAYTVKNLRRSTKYKFK 80 (109)
T ss_dssp CCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEES-----CSEEEEESCCSSCEEEEE
T ss_pred CCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEeCC-----ccEEEECCCCCCCEEEEE
Confidence 34677777888888999999999887544 3 589999999876543 232222221 478999999999999999
Q ss_pred EEEEeCCCCCCceE-EEEecCCCCCc
Q psy4956 258 VQTVSEDEISTPTT-AQYRTIPLRPL 282 (361)
Q Consensus 258 V~a~~~~~~s~~~~-~~~~t~~~~p~ 282 (361)
|.|.|..|.+.+.. ..+.|.+.+|.
T Consensus 81 V~A~n~~G~s~~S~~~~~~T~~~~P~ 106 (109)
T 1x5x_A 81 VIAYNSEGKSNPSEVVEFTTCPDSGP 106 (109)
T ss_dssp EEEECSSCEEEECCCEEEECCCCCCC
T ss_pred EEEEeCCCCcCCccCEEeEeCCCCCC
Confidence 99999988775543 45667666653
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.3e-11 Score=88.76 Aligned_cols=95 Identities=13% Similarity=0.243 Sum_probs=70.6
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeE-EeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
.+|.++.+...+.+++.|+|++|. ++.+.+|+|+|+.......... ........ .+.|.+|.|++.|.|+|+|.+.
T Consensus 20 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~ 98 (121)
T 2dlh_A 20 SAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQ-ITTIGNLVPQKTYSVKVLAFTS 98 (121)
T ss_dssp SCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCS-EECCBSCCSSCEEEEEEEEEES
T ss_pred CCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEecCCce-EEEecCCCCCCEEEEEEEEEeC
Confidence 478889888888999999999986 4678899999976543211111 11122344 8999999999999999999999
Q ss_pred CCCcccceeeeeccCCCCC
Q psy4956 168 SKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 168 ~~~s~~~~~~~~~t~p~~p 186 (361)
.|.+..+....++|.+..|
T Consensus 99 ~G~g~~S~~~~~~T~~~~P 117 (121)
T 2dlh_A 99 IGDGPLSSDIQVITQTGSG 117 (121)
T ss_dssp SCBCCCCCCEEEECCCCCS
T ss_pred CccCCCCCCEEEECCCCCC
Confidence 9888766566777764444
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=7e-11 Score=84.90 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=68.6
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-Cc-ceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SI-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.++.+...+.+ +.|+|+++... +. +.+|.|.|+..+...+.............+.+.|.+|.|++.|.|+|
T Consensus 6 ~~P~~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV 84 (122)
T 2e3v_A 6 SGPSSPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL 84 (122)
T ss_dssp CCCCCCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEE
T ss_pred cCCcCCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEE
Confidence 34777999999888887 99999987533 55 89999999877654442211100111235789999999999999999
Q ss_pred EEEeCCCCCCceE-EEEecCC
Q psy4956 259 QTVSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 259 ~a~~~~~~s~~~~-~~~~t~~ 278 (361)
+|+|..|.+.++. ..+.+.+
T Consensus 85 ~A~n~~G~g~~S~~~~~~t~~ 105 (122)
T 2e3v_A 85 AALNGKGLGEISAASEFKTQP 105 (122)
T ss_dssp EEEETTEECCCCCCEEEECCC
T ss_pred EEEeCCccCCCcccccccccC
Confidence 9999988776543 2333443
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=99.24 E-value=4e-10 Score=88.19 Aligned_cols=84 Identities=19% Similarity=0.296 Sum_probs=71.3
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+.+|.++.+...+.+++.|+|.+| .+.+.+|+|.|+..+.........+....+ +++|.+|.|++.|.|+|+|.+..|
T Consensus 104 ~~~P~~l~v~~~t~~si~l~W~~p-~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t-~~~l~gL~p~t~Y~~~V~A~~~~G 181 (195)
T 2qbw_A 104 SSVPTNLEVVAATPTSLLISWDAS-YYGVSYYRITYGETGGNSPVQEFTVPYSSS-TATISGLKPGVDYTITVYAYSDYY 181 (195)
T ss_dssp CCSSCCCEEEEEETTEEEEECCCC-CSSCSEEEEEEEETTCCSCCEEEEEETTCS-EEEECSCCTTCEEEEEEEEESSTT
T ss_pred CCCCcccEEEeCCCCEEEEEEeCC-CCCccEEEEEEEECCCCCcceEEEeCCCCC-EEEeCCCCCCCEEEEEEEEEeCCc
Confidence 567889999999999999999998 478899999998876544456667777777 999999999999999999999988
Q ss_pred Ccccce
Q psy4956 170 ESVAYT 175 (361)
Q Consensus 170 ~s~~~~ 175 (361)
.+..+.
T Consensus 182 ~g~~S~ 187 (195)
T 2qbw_A 182 GSHHYS 187 (195)
T ss_dssp SSCBCC
T ss_pred cCCCCC
Confidence 886543
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=6.1e-11 Score=85.05 Aligned_cols=95 Identities=17% Similarity=0.247 Sum_probs=73.6
Q ss_pred cceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCC-C--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCC
Q psy4956 79 WLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI-S--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPG 155 (361)
Q Consensus 79 ~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~-~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 155 (361)
+....+.....|.+|.++.+...+.+++.|+|++|. + ..+.+|.|+|+......|.. ........ .+.+.+|.|+
T Consensus 7 ~~~~~v~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~-~~~~~~~~-~~~v~~L~p~ 84 (120)
T 2yux_A 7 GASIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFT-VIEHYHRT-SATITELVIG 84 (120)
T ss_dssp CCCCCCCCCCCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEE-EESSCCSS-CCEECCCCSS
T ss_pred cEEEEEEeecCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEE-eeecCCcC-EEEECCCCCC
Confidence 334455556689999999999999999999999986 2 35889999998865444433 22233445 8999999999
Q ss_pred cEEEEEEEEEeCCCCcccce
Q psy4956 156 GSYQVQLFSVYDSKESVAYT 175 (361)
Q Consensus 156 ~~Y~v~v~a~~~~~~s~~~~ 175 (361)
+.|.|+|+|.+..|.+.++.
T Consensus 85 t~Y~frV~A~n~~G~s~~S~ 104 (120)
T 2yux_A 85 NEYYFRVFSENMCGLSEDAT 104 (120)
T ss_dssp EEEEEEECCCSSSCSCSSCE
T ss_pred CEEEEEEEEeeCCcCCCCcc
Confidence 99999999999988887644
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.22 E-value=4.5e-11 Score=86.55 Aligned_cols=102 Identities=20% Similarity=0.306 Sum_probs=75.0
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCC---------C--cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISG---------K--YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGS 157 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~---------~--~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 157 (361)
.|.+...+.+..++.+++.|+|.+|... . +..|.|.|...+.....+.. +....+ ++.|.+|+|++.
T Consensus 17 ~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~-~~g~~t-s~~v~~L~P~T~ 94 (137)
T 1wk0_A 17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-YVGEET-NITLNDLKPAMD 94 (137)
T ss_dssp HTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-EEESCS-EEEECSCCTTCE
T ss_pred ccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEE-EecCcc-EEEEcCCCCCCE
Confidence 3555667788888999999999997622 1 47899988665433333333 334555 999999999999
Q ss_pred EEEEEEEEeCCCCcccceeeeeccC---CCCCcceEEE
Q psy4956 158 YQVQLFSVYDSKESVAYTSRNFTTK---PNTPGKFIVW 192 (361)
Q Consensus 158 Y~v~v~a~~~~~~s~~~~~~~~~t~---p~~p~~l~~~ 192 (361)
|.|+|+|.+..|.+..+....|+|. |.+|..+++.
T Consensus 95 Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l~ 132 (137)
T 1wk0_A 95 YHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIS 132 (137)
T ss_dssp ECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCCC
T ss_pred EEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEEe
Confidence 9999999999988877677778776 5555555443
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.1e-10 Score=82.33 Aligned_cols=97 Identities=19% Similarity=0.126 Sum_probs=71.2
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-Cc----ceEEEEEEeCCCCCC-ceeEEeeccCCCCCcEEEecCCCCCCeE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SI----YTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~----~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 254 (361)
..|.+|.+|++...+.++|.|+|.++... +. +.+|.|.|+..+... ....+.. ..+.+.|.+|+|++.|
T Consensus 17 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-----~~~~~~v~gL~P~T~Y 91 (123)
T 2edd_A 17 TPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-----TSLSYTATGLKPNTMY 91 (123)
T ss_dssp CSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-----SSSEEEEESCCTTCEE
T ss_pred CCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-----CceEEEecCCCCCCEE
Confidence 34678999999999999999999865322 22 349999998753211 1111222 1488999999999999
Q ss_pred EEEEEEEeCCCCCCce-EEEEecCCC-CCc
Q psy4956 255 NISVQTVSEDEISTPT-TAQYRTIPL-RPL 282 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~-~~~~~t~~~-~p~ 282 (361)
.|+|+|.+..|.+..+ .+.++|.+. +|.
T Consensus 92 ~f~V~A~n~~g~g~~S~~v~~~T~~~~~Ps 121 (123)
T 2edd_A 92 EFSVMVTKNRRSSTWSMTAHATTYEASGPS 121 (123)
T ss_dssp EEEEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred EEEEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence 9999999988877654 457778777 664
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.22 E-value=9.2e-11 Score=84.81 Aligned_cols=96 Identities=17% Similarity=0.180 Sum_probs=71.3
Q ss_pred CCCcceEEEeccCCeEEEEeecCCC---CCcceEEEEEEeCCCCCCc-------eeEEeeccCCCCCcEEEecCCCCCCe
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPES-------VLYVEKEGEPPGPAQAAFKGLVPGRA 253 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~L~p~t~ 253 (361)
.+|.++.+...+.+++.|+|+++.. .+.+.+|.|.|+..+.... ...... ....+.+.|.+|.|++.
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~ 92 (125)
T 1uen_A 16 VAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTF---QGSKTHGMLPGLEPFSH 92 (125)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEE---ESSCSEEEEESCCSSCE
T ss_pred CCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEe---cCCccEEEeCCCCCCCE
Confidence 5788999999999999999998732 3679999999986544321 011111 23358899999999999
Q ss_pred EEEEEEEEeCCCCCCceE-EEEecCCCCCc
Q psy4956 254 YNISVQTVSEDEISTPTT-AQYRTIPLRPL 282 (361)
Q Consensus 254 Y~v~V~a~~~~~~s~~~~-~~~~t~~~~p~ 282 (361)
|.|+|+|++..|.+..+. +.+.|.+..|.
T Consensus 93 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 122 (125)
T 1uen_A 93 YTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122 (125)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred EEEEEEEecCCCCCCCCCCEEEECCCCCCC
Confidence 999999999988765443 56677666653
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=2.2e-10 Score=80.08 Aligned_cols=88 Identities=18% Similarity=0.272 Sum_probs=67.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEe--eCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFW--SPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W--~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.|.+|.+|++...+.+++.|+| .+|. ++. .+|+|.|+... ......+ ... .+.|.+|.|++.|.|+|+|
T Consensus 9 ~P~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~-~~Y~v~y~~~~---~~~~~~~--~~~-~~~i~~L~p~t~Y~f~V~A 81 (107)
T 1x5a_A 9 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGN-LSYELHVLNQD---EEWHQMV--LEP-RVLLTKLQPDTTYIVRVRT 81 (107)
T ss_dssp CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSC-CEEEEEEECSS---CEEEEEE--SSS-EEEEESCCSSCEEEEEEEE
T ss_pred CCCCCCceEEEecCCCEEEEEECCCCCCCCCCc-eEEEEEEEeCC---CCceEEE--ecc-eEEECCCCCCCEEEEEEEE
Confidence 5778889999999999999999 8776 455 89999997651 1112222 233 6999999999999999999
Q ss_pred EeCCCCcccceeeeeccCC
Q psy4956 165 VYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p 183 (361)
.+..|.+..+....++|.+
T Consensus 82 ~~~~G~g~~S~~~~~~T~~ 100 (107)
T 1x5a_A 82 LTPLGPGPFSPDHEFRTSP 100 (107)
T ss_dssp ECSSSCCCCCCCEEEECCC
T ss_pred ECCCccCCCCCCEEEEECC
Confidence 9998887766666666664
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.3e-10 Score=82.13 Aligned_cols=93 Identities=18% Similarity=0.203 Sum_probs=69.7
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCC-ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.+|.++.+...+.+++.|.|+++... +.+.+|.|.|+..+... ....... ..+.+.+.+|.|++.|.|+|+
T Consensus 10 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-----~~~~~~i~~L~p~t~Y~~~V~ 84 (111)
T 1x5l_A 10 APSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKA-----VTTRATVSGLKPGTRYVFQVR 84 (111)
T ss_dssp CCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEE-----SSSEEEECSCCTTCEEEECEE
T ss_pred CCCCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecC-----CCCEEEEcCCCCCCEEEEEEE
Confidence 4778889999888999999999877433 67899999998765322 2222222 248899999999999999999
Q ss_pred EEeCCCCCCce-EEEEecCCC
Q psy4956 260 TVSEDEISTPT-TAQYRTIPL 279 (361)
Q Consensus 260 a~~~~~~s~~~-~~~~~t~~~ 279 (361)
|.+..|.+..+ .+.+.|.+.
T Consensus 85 A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 85 ARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp EEETTEECCCCCCEEEECCCT
T ss_pred EEeCCcCCCCcccEEEEcCCC
Confidence 99998877653 345555443
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.4e-11 Score=86.39 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=71.2
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
...|.+|.++.+...+.+++.|+|+++... ..+.+|.|+++......+..... ....+.+.+.+|.|++.|.|+
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~----~~~~~~~~v~~L~p~t~Y~fr 90 (120)
T 2yux_A 15 IDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE----HYHRTSATITELVIGNEYYFR 90 (120)
T ss_dssp CCCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES----SCCSSCCEECCCCSSEEEEEE
T ss_pred ecCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee----cCCcCEEEECCCCCCCEEEEE
Confidence 456889999999999999999999987544 35889999998765554443221 233578999999999999999
Q ss_pred EEEEeCCCCCCceEEE
Q psy4956 258 VQTVSEDEISTPTTAQ 273 (361)
Q Consensus 258 V~a~~~~~~s~~~~~~ 273 (361)
|.|.|..|.+.++...
T Consensus 91 V~A~n~~G~s~~S~~s 106 (120)
T 2yux_A 91 VFSENMCGLSEDATMT 106 (120)
T ss_dssp ECCCSSSCSCSSCEEC
T ss_pred EEEeeCCcCCCCccCc
Confidence 9999999988777643
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=99.20 E-value=9.7e-10 Score=86.30 Aligned_cols=162 Identities=11% Similarity=0.082 Sum_probs=99.5
Q ss_pred cceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC--CCceeEEeeccCCCCCcEEEec--CCCCCCeEEEEEEEEe
Q psy4956 187 GKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA--PESVLYVEKEGEPPGPAQAAFK--GLVPGRAYNISVQTVS 262 (361)
Q Consensus 187 ~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~L~p~t~Y~v~V~a~~ 262 (361)
.+|.........+.++|++.. ......|.+.+..... .............+....+.|. .+.....|.|.|.+
T Consensus 3 ~nl~C~~~~~~~~~C~W~~~~-~~~~~~y~l~y~~~~~~~~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~-- 79 (199)
T 2b5i_C 3 PEVQCFVFNVEYMNCTWQSSS-EPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD-- 79 (199)
T ss_dssp CCCEEEEETTTEEEEECCCCS-SSSCCCCEEEEEETTSSSCCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC--
T ss_pred CcCEEEECCCcEEEEEecCCC-cCCCceEEEEEEECCCCCCccccCCCccccCCceeEEEECCcccccceEEEEEEEe--
Confidence 467777777789999999764 2223577777754321 1111110000001112344443 45456688888864
Q ss_pred CCCCCCceEEEEe----cCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCcee
Q psy4956 263 EDEISTPTTAQYR----TIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQC 338 (361)
Q Consensus 263 ~~~~s~~~~~~~~----t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~ 338 (361)
+.|........+. ..|.||.+|.+ .......+.|+|++|... ....|+|+|+..++..+ .... ....+++
T Consensus 80 ~~g~~~s~~~~~~~~~iVkP~pP~~l~~--~~~~~~~l~l~W~~p~~~-~~l~yev~y~~~~~~~w--~~~~-~~~~~~~ 153 (199)
T 2b5i_C 80 PREPRRQATQMLKLQNLVIPWAPENLTL--HKLSESQLELNWNNRFLN-HCLEHLVQYRTDWDHSW--TEQS-VDYRHKF 153 (199)
T ss_dssp SSCTTCEEEEEECGGGSEECCCCEEEEE--EEEETTEEEEEEECSSCS-TTCEEEEEEEETTCSSC--EEEE-ECSSCEE
T ss_pred CCcceecceEEEchHHceecCCCcEEEE--EECCCCCEEEEECCCCCC-CceEEEEEEeecCCccc--EEEe-ccCceEE
Confidence 3333222222222 35899999999 666667999999998531 34589999998654222 2122 2345789
Q ss_pred EeccCCCCCceEEEEEEEEe
Q psy4956 339 DMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 339 ~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.+.+ |.|++.|.|+|+|..
T Consensus 154 ~l~~-l~p~~~Y~vqVR~~~ 172 (199)
T 2b5i_C 154 SLPS-VDGQKRYTFRVRSRF 172 (199)
T ss_dssp EECS-CCTTSCEEEEEEEEC
T ss_pred EecC-CCCCcEEEEEEEEec
Confidence 9986 999999999999987
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=6e-11 Score=83.54 Aligned_cols=92 Identities=13% Similarity=0.164 Sum_probs=67.4
Q ss_pred CCCCC-ccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 90 PDPPT-NLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 90 ~~~p~-~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
|.+|. ++.....+.+++.|+|++|.+ +.+.+|+|+|+..+...+.... ..... .+.|.+|.|++.|.|+|+|.+
T Consensus 10 P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~-~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2db8_A 10 PATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY--VGKET-MCTVDGLHFNSTYNARVKAFN 86 (110)
T ss_dssp CCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE--EESCS-CEEEECCCSSSCCEEEEEEEC
T ss_pred CCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE--eCCcC-EEEECCCCCCCEEEEEEEEEe
Confidence 44453 343444578999999999873 5688999999875443343222 22444 899999999999999999999
Q ss_pred CCCCcccceeeeeccCCC
Q psy4956 167 DSKESVAYTSRNFTTKPN 184 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p~ 184 (361)
..|.+.++....++|.+.
T Consensus 87 ~~G~s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 87 KTGVSPYSKTLVLQTSEG 104 (110)
T ss_dssp SSCBCCCCSCEECCCCCC
T ss_pred CCcCCCCCCCEEEEcCCC
Confidence 999888766667777653
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=2e-10 Score=81.77 Aligned_cols=88 Identities=19% Similarity=0.245 Sum_probs=65.5
Q ss_pred CCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
+|.++.+.. ..++|.|+|+++. ..+.+.+|+|.|+..+..... ..... .+.+.+. |.+++.|.|+|+|+
T Consensus 21 ~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-~~~~~-----~~~~~~~-L~~~t~Y~~~V~A~ 92 (117)
T 1wj3_A 21 PPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQ-VLNTN-----KTSAELV-LPIKEDYIIEVKAT 92 (117)
T ss_dssp CCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCE-EEEES-----SSEEEEE-CCCSSCEEEEEEEE
T ss_pred CCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCe-EEeCC-----CcEEEEE-CCCCCEEEEEEEEE
Confidence 577788766 7789999998772 238899999999876544332 22222 2567777 99999999999999
Q ss_pred eCCCCCCce-EEEEecCCCC
Q psy4956 262 SEDEISTPT-TAQYRTIPLR 280 (361)
Q Consensus 262 ~~~~~s~~~-~~~~~t~~~~ 280 (361)
+..|.++.+ .+.+.|....
T Consensus 93 n~~G~Gp~S~~v~~~T~~~v 112 (117)
T 1wj3_A 93 TDGGDGTSSEQIRIPRITSS 112 (117)
T ss_dssp ESSCCCCBCCCEEECCCCCC
T ss_pred CCCccCCCCCCEEEEcCCCC
Confidence 999988776 4566776543
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-10 Score=83.20 Aligned_cols=89 Identities=15% Similarity=0.233 Sum_probs=67.4
Q ss_pred EEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCC---CCCCeEEeec-CCCCceEEEcCCCCCcEEEEEEEEEeCCCCcc
Q psy4956 98 VNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSE---KTPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESV 172 (361)
Q Consensus 98 ~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~---~~~~~~~~~~-~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~ 172 (361)
+...++++|.|+|+++. ++.+.+|+|.|+..+. ........+. .... ++.|.+|+|++.|.|+|+|++..|.+.
T Consensus 24 ~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~L~p~T~Y~~~V~A~n~~G~Gp 102 (120)
T 1ujt_A 24 PVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTER-SAVLVNLKKGVTYEIKVRPYFNEFQGM 102 (120)
T ss_dssp CCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCC-EEEEESCCSSEEEEEEEEEESSSCCCC
T ss_pred cEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcC-EEEECCCCCCCEEEEEEEEECCCccCC
Confidence 34557899999998753 6789999999998754 1223333333 3345 999999999999999999999999888
Q ss_pred cceeeeeccCCCC-Cc
Q psy4956 173 AYTSRNFTTKPNT-PG 187 (361)
Q Consensus 173 ~~~~~~~~t~p~~-p~ 187 (361)
.+....++|.... |.
T Consensus 103 ~S~~v~~~T~e~v~Ps 118 (120)
T 1ujt_A 103 DSESKTVRTTEESGPS 118 (120)
T ss_dssp CCCCEEEEECSSCCCC
T ss_pred CCCCEEEECCCCCCCC
Confidence 7777777777665 53
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-10 Score=81.17 Aligned_cols=89 Identities=15% Similarity=0.157 Sum_probs=68.9
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.++.+...+.+++.|.|.++..+ ..+.+|.|+++..+...+.... ......+.+.+.+|.+++.|.|+|
T Consensus 6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~---~~~~~~~~~~v~~L~p~t~Y~frV 82 (110)
T 2yuw_A 6 SGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN---KDLIDKTKFTITGLPTDAKIFVRV 82 (110)
T ss_dssp CCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC---SSCCCSSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec---cccCccCEEEECCCCCCCEEEEEE
Confidence 34788999999999999999999987543 4589999999876544332211 112345889999999999999999
Q ss_pred EEEeCCCCCCceEE
Q psy4956 259 QTVSEDEISTPTTA 272 (361)
Q Consensus 259 ~a~~~~~~s~~~~~ 272 (361)
+|.|..|.+.+...
T Consensus 83 ~A~n~~G~s~~S~~ 96 (110)
T 2yuw_A 83 KAVNAAGASEPKYY 96 (110)
T ss_dssp EEEETTEECCCEEC
T ss_pred EEEcCCcCCCCcCC
Confidence 99999988776653
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-10 Score=83.38 Aligned_cols=95 Identities=15% Similarity=0.239 Sum_probs=70.4
Q ss_pred EEecCCCCCC-ccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCC-----------CCCCeEEeecCCCCceEEEcCC
Q psy4956 85 SITTPPDPPT-NLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE-----------KTPPRIIGFTENPPAGYSLKDL 152 (361)
Q Consensus 85 ~~~t~~~~p~-~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~L 152 (361)
.+...|.+|. ++.+...+.+++.|+|++|.+..+.+|.+.|+...+ ..|..... ...+ .+++.+|
T Consensus 11 ~~~~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~--~~~~-~~~v~gL 87 (127)
T 2dmk_A 11 DYLTAPNPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN--IKQN-HYTVHGL 87 (127)
T ss_dssp SCCSSCCCCEEEEEEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE--ECSS-EEEEESC
T ss_pred cccCCCcCCCCCCEEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec--ccCC-eEEECCC
Confidence 3456789998 899999999999999999875458889999876211 12322222 2344 8999999
Q ss_pred CCCcEEEEEEEEEeCCCCcccceeeeeccCC
Q psy4956 153 TPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 153 ~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p 183 (361)
.|++.|.|+|+|.+..|.+ .+....++|.+
T Consensus 88 ~p~t~Y~frV~A~N~~G~~-~S~~v~~~T~~ 117 (127)
T 2dmk_A 88 QSGTRYIFIVKAINQAGSR-NSEPTRLKTNS 117 (127)
T ss_dssp CSSCEEEEEEEEEESSCEE-ECCCEEEECCS
T ss_pred CCCCEEEEEEEEEeCCCCC-CCcCeEeEeCC
Confidence 9999999999999998884 33445556654
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-10 Score=81.28 Aligned_cols=88 Identities=23% Similarity=0.183 Sum_probs=67.6
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-C-cceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-S-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.++.+...+.+++.|+|.++... + .+.+|.|+++..+...+... .......+.+.+.+|.+++.|.|+|
T Consensus 7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~---~~~~~~~~~~~v~~L~p~t~Y~frV 83 (111)
T 1x5y_A 7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPA---NKEPVERCGFTVKDLPTGARILFRV 83 (111)
T ss_dssp SCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEES---SSSCBSSSEEEEECCCTTCCEEEEE
T ss_pred CCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEc---cccCCcccEEEECCCCCCCEEEEEE
Confidence 34788999999999999999999987544 2 48999999987655443221 1112345789999999999999999
Q ss_pred EEEeCCCCCCceE
Q psy4956 259 QTVSEDEISTPTT 271 (361)
Q Consensus 259 ~a~~~~~~s~~~~ 271 (361)
+|.|..|.+.+..
T Consensus 84 ~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 84 VGVNIAGRSEPAT 96 (111)
T ss_dssp EEEETTEECCCCC
T ss_pred EEEcCCcCCCCcc
Confidence 9999988776554
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.9e-10 Score=81.68 Aligned_cols=93 Identities=11% Similarity=0.144 Sum_probs=67.0
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCC-----c-ceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPAS-----I-YTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~-----~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
|.+|..+.+..++.+++.|+|+++..++ . +.+|.|+........+....... .+.+.+.+|+|++.|.|
T Consensus 16 p~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~~-----~t~~~v~gL~p~t~Y~f 90 (120)
T 1wfu_A 16 LSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGY-----ATRHVVEGLEPRTLYKF 90 (120)
T ss_dssp CCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEES-----CSEEEEESCCTTCEEEE
T ss_pred CCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEecCC-----ccEEEECCCCCCCEEEE
Confidence 5566666667788899999999886544 2 78999995543444444433322 36799999999999999
Q ss_pred EEEEEeCCCCCCceE-EEEecCCCC
Q psy4956 257 SVQTVSEDEISTPTT-AQYRTIPLR 280 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~-~~~~t~~~~ 280 (361)
+|+|.|..|.+.+.. +.+.|...+
T Consensus 91 rV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 91 RLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEEECCCCCCCCCccEeeEcCCCC
Confidence 999999999876443 455665543
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.6e-10 Score=82.48 Aligned_cols=94 Identities=16% Similarity=0.249 Sum_probs=69.4
Q ss_pred eccCCCCCc-ceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC-----------CCceeEEeeccCCCCCcEEEec
Q psy4956 179 FTTKPNTPG-KFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA-----------PESVLYVEKEGEPPGPAQAAFK 246 (361)
Q Consensus 179 ~~t~p~~p~-~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+...|.+|. ++.+...+.+++.|+|+++...+ +.+|.+.|....+ ..+...... ..+.+.+.
T Consensus 12 ~~~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g-~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~-----~~~~~~v~ 85 (127)
T 2dmk_A 12 YLTAPNPPSIREELCTASHDTITVHWISDDEFS-ISSYELQYTIFTGQANFISLYNSVDSWMIVPNI-----KQNHYTVH 85 (127)
T ss_dssp CCSSCCCCEEEEEEEEEETTEEEEEEECSCCSS-EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEE-----CSSEEEEE
T ss_pred ccCCCcCCCCCCEEEeeeCCEEEEEECCCCCCC-ccceEEEEEEecccccccccccCCCCcEEeecc-----cCCeEEEC
Confidence 345688998 89999999999999999886445 7889998875111 112221111 24789999
Q ss_pred CCCCCCeEEEEEEEEeCCCCCCceEEEEecCC
Q psy4956 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRTIP 278 (361)
Q Consensus 247 ~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t~~ 278 (361)
+|.|++.|.|+|+|+|..|.+.+..+.+.|.+
T Consensus 86 gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~ 117 (127)
T 2dmk_A 86 GLQSGTRYIFIVKAINQAGSRNSEPTRLKTNS 117 (127)
T ss_dssp SCCSSCEEEEEEEEEESSCEEECCCEEEECCS
T ss_pred CCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCC
Confidence 99999999999999999887655556666654
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=5.3e-09 Score=84.70 Aligned_cols=163 Identities=11% Similarity=0.097 Sum_probs=106.9
Q ss_pred CCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCC--CCCCeEEe-e--cCCCCceEEEcC--CCCCcEEEEEEEE
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE--KTPPRIIG-F--TENPPAGYSLKD--LTPGGSYQVQLFS 164 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~--~~~~~~~~-~--~~~~~~~~~l~~--L~p~~~Y~v~v~a 164 (361)
+|.++.........+..+|++........|.+.|+-.+. ..+..+.. . ..... .+.+.. +.....|.|.|.+
T Consensus 39 ~~~nl~C~~~~~~~l~CtW~~g~~~~~t~y~l~y~~~~~~~~~~~~C~~y~~~~g~~~-~C~f~~~~~~~~~~y~i~V~~ 117 (247)
T 2erj_C 39 PLPEVQCFVFNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITS-GCQLQKKEIHLYQTFVVQLQD 117 (247)
T ss_dssp CCCCCEEEEETTSEEEEECCTTSSSSCCCCEEEEEESSSSCCCCEECCSEEESSSSEE-EEEEEGGGCCTTSCEEEEEEC
T ss_pred CCCCCEEEECCCCEEEEEEcCCCCCCCeeEEEEEEECCCCCCcceeCCCccccCCcce-EEEeCCCCcceeeEEEEEEEE
Confidence 567888877778899999998642224789998875422 12222211 1 11122 555543 4456779888864
Q ss_pred EeCCCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCC
Q psy4956 165 VYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGP 240 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~ 240 (361)
..+.... ....+. -+|.||.+|.+.......+.|+|+++.. .....|.|+|+..+...+..... ...
T Consensus 118 --~~g~~~s-~~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~-~~~L~Yevry~~~~~~~W~~~~~-----~~~ 188 (247)
T 2erj_C 118 --PREPRRQ-ATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL-NHCLEHLVQYRTDWDHSWTEQSV-----DYR 188 (247)
T ss_dssp --SSCTTCE-EEEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSC-CTTEEEEEEEECSSCSSCEEEEE-----CSS
T ss_pred --CCCcccc-ceEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCC-CCcEEEEEEEeeCCCCCCEEEec-----CCc
Confidence 2222211 122221 2389999999998777899999998753 34468999999876655543221 124
Q ss_pred cEEEecCCCCCCeEEEEEEEEeCC
Q psy4956 241 AQAAFKGLVPGRAYNISVQTVSED 264 (361)
Q Consensus 241 ~~~~~~~L~p~t~Y~v~V~a~~~~ 264 (361)
+.+.+.+|.|++.|.|+|++....
T Consensus 189 ~~~~l~~L~p~~~Y~vqVR~k~~~ 212 (247)
T 2erj_C 189 HKFSLPSVDGQKRYTFRVRSRFNP 212 (247)
T ss_dssp CEEEESCCCTTSCEEEEEEEEECS
T ss_pred eEEEecCCCCCCEEEEEEEEEeCC
Confidence 789999999999999999999843
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=4.6e-10 Score=81.32 Aligned_cols=105 Identities=21% Similarity=0.163 Sum_probs=72.8
Q ss_pred eeccCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCC--CCceeEEeeccCCCCCcEEEecCCCCCCeE
Q psy4956 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDA--PESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 178 ~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 254 (361)
.....|.+|.++.+...+.+++.|+|.++.. .+.+.+|.|+|+.... ..+...... ....+. .+.+|.|++.|
T Consensus 12 ~v~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~---~~~~~~-~i~~L~p~t~Y 87 (127)
T 1uey_A 12 PVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---SGTQTT-AQLNLSPYVNY 87 (127)
T ss_dssp CCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE---ESSCCE-EEECCCTTCEE
T ss_pred EeecCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeee---CCCceE-EEecCCCCCEE
Confidence 3345688999999999999999999997642 2678999999987543 222222111 112244 47799999999
Q ss_pred EEEEEEEeCCCCCCceEE--EEecCCCC----CccceE
Q psy4956 255 NISVQTVSEDEISTPTTA--QYRTIPLR----PLSFTY 286 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~~~--~~~t~~~~----p~~l~~ 286 (361)
.|+|+|.|..|.+.+... .+.|.+.+ |.+|.+
T Consensus 88 ~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~ 125 (127)
T 1uey_A 88 SFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS 125 (127)
T ss_dssp CCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred EEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence 999999999888765443 44554433 555554
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.8e-09 Score=83.46 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=101.8
Q ss_pred EEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCC---CCCccc
Q psy4956 44 TYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPI---SGKYSG 120 (361)
Q Consensus 44 ~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~ 120 (361)
.+........+.|.++.......+.+.|.|..|.......+.....|.+|..+.+. ....++.|+|.+|. ..++.+
T Consensus 68 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~ 146 (215)
T 3mtr_A 68 KIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILK 146 (215)
T ss_dssp EEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEEEEE-EETTEEEEEEECCSCCCSSCEEE
T ss_pred EEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcceEEE-EecceEEEEEecCCccCCCceEE
Confidence 44433346789999999999888888898887665555556666678888777764 56788999998765 236789
Q ss_pred EEEEEEECCCCCCCeEEe-ec--CCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccCC
Q psy4956 121 FKLKVISLSEKTPPRIIG-FT--ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 121 y~v~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p 183 (361)
|.|+|+..+...|..... +. .... .+.|.+|.+++.|.|++.|.|..|.+.++....++|.|
T Consensus 147 y~v~~~~~~~~~w~~~~~~~~~~~~~~-~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 147 YKAEWRAVGEEVWHSKWYDAKEASMEG-IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp EEEEEEETTCCCCEEEEEEHHHHHHHT-EEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEECCCCcccccccccccccccc-cEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 999999876544443221 11 1114 89999999999999999999999998876666677765
|
| >2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.8e-09 Score=87.73 Aligned_cols=155 Identities=14% Similarity=0.147 Sum_probs=109.0
Q ss_pred EEEEEcCCCC--CCCCeEEeecCccceEEecC-CCCCceEEEEEEEecCCcCccceeeEEEecCCCCCCccEEEEEeCCE
Q psy4956 29 RLDYIPAHGH--PPPNTTYVSRDIKDNIEFSE-GLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDPPTNLSVNVRSGKT 105 (361)
Q Consensus 29 ~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~p~~l~~~~~~~~~ 105 (361)
.|.|...... ......+........+.|.+ +.+...+.+++.|.|..|.......+.+...|.+|.++.+.....++
T Consensus 135 ~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~ 214 (305)
T 2nzi_A 135 VITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDS 214 (305)
T ss_dssp EEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSC
T ss_pred EEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCE
Confidence 5666653221 11123333333467889998 99999999999999887666556667777789999999888888999
Q ss_pred EEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeee-ecc
Q psy4956 106 AQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRN-FTT 181 (361)
Q Consensus 106 v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~-~~t 181 (361)
+.|+|.+|. ...+..|.++++......|...... ... .+.|.+|.+++.|.|+++|.|..|.+.++.... .++
T Consensus 215 v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~--~~~-~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t 291 (305)
T 2nzi_A 215 VNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA--RET-RYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTIT 291 (305)
T ss_dssp EEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE--SSS-EEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEEC
T ss_pred EEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc--cCc-eEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEc
Confidence 999999864 2357899999988654444433322 244 899999999999999999999998887654333 334
Q ss_pred CCCCC
Q psy4956 182 KPNTP 186 (361)
Q Consensus 182 ~p~~p 186 (361)
.+.+|
T Consensus 292 ~~~~p 296 (305)
T 2nzi_A 292 KEDKT 296 (305)
T ss_dssp CC---
T ss_pred CCccc
Confidence 44334
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.4e-10 Score=80.47 Aligned_cols=91 Identities=18% Similarity=0.195 Sum_probs=68.1
Q ss_pred eEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC----CCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCC
Q psy4956 189 FIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA----PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264 (361)
Q Consensus 189 l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 264 (361)
+.+...+.++|.|+|+++...+.+.+|.|.|+..+. ..... .. .......++.|.+|+|++.|.|+|+|++..
T Consensus 22 ~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~-~~--v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~ 98 (120)
T 1ujt_A 22 HNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQN-LD--AKVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp CCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEE-EE--CCCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred eccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEE-EE--ecCCCcCEEEECCCCCCCEEEEEEEEECCC
Confidence 344566889999999976556889999999997754 12211 11 113446899999999999999999999998
Q ss_pred CCCCceE-EEEecCCCC-Cc
Q psy4956 265 EISTPTT-AQYRTIPLR-PL 282 (361)
Q Consensus 265 ~~s~~~~-~~~~t~~~~-p~ 282 (361)
|.++.+. +.+.|..+. |.
T Consensus 99 G~Gp~S~~v~~~T~e~v~Ps 118 (120)
T 1ujt_A 99 FQGMDSESKTVRTTEESGPS 118 (120)
T ss_dssp CCCCCCCCEEEEECSSCCCC
T ss_pred ccCCCCCCEEEECCCCCCCC
Confidence 8887664 677787776 64
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=6.6e-11 Score=82.38 Aligned_cols=83 Identities=16% Similarity=0.238 Sum_probs=65.3
Q ss_pred CCCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
|.+|.++.+...+.+++.|+|+++. ..+.+.+|.|.|+..+...... ... ..+.+.+.+|.|++.|.|+|+
T Consensus 9 p~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~-~~~-----~~~~~~i~~L~p~t~Y~~~V~ 82 (103)
T 2edy_A 9 SGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQ-NIT-----TDTRFTLTGLKPDTTYDIKVR 82 (103)
T ss_dssp SCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEE-EEE-----SSSCCEECSCCTTCCEEEECC
T ss_pred CCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEE-EcC-----CcceEEEcCCCCCCEEEEEEE
Confidence 5678899998888999999999872 3478899999998776533222 222 247899999999999999999
Q ss_pred EEeCCCCCCceE
Q psy4956 260 TVSEDEISTPTT 271 (361)
Q Consensus 260 a~~~~~~s~~~~ 271 (361)
|.+..|.+..+.
T Consensus 83 A~n~~G~g~~S~ 94 (103)
T 2edy_A 83 AWTSKGSGPLSP 94 (103)
T ss_dssp EECSSCBCCCCC
T ss_pred EECCCCCCCCCC
Confidence 999988775443
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=2.9e-10 Score=79.99 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=61.0
Q ss_pred cCCCCCccceEEeeecCCceEEEEeeCCC--CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEE
Q psy4956 276 TIPLRPLSFTYDKASITSNSLRVVWEPPK--GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353 (361)
Q Consensus 276 t~~~~p~~l~~~~~~~~~~si~l~W~~~~--~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 353 (361)
..|.+|..+.+ ..++.+++.|+|.+|. +...+.+|.|+|+..+.+.+.. +.......+.+++.+ |+||+.|.|+
T Consensus 9 ~~p~~P~~P~v--~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~-~~~~~~~~~~~~v~~-L~p~t~Y~fr 84 (112)
T 1bpv_A 9 SPIDPPGKPVP--LNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLK-ANFSNILENEFTVSG-LTEDAAYEFR 84 (112)
T ss_dssp CCCCCCCCCEE--EEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEE-CCCSCCCSSEEEECS-CCSSCCEEEE
T ss_pred CCCCCCCCCEE--EEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEE-eecccCccCEEEECC-CCCCCEEEEE
Confidence 35677888888 8889999999999763 3346899999999875433221 111234567899986 9999999999
Q ss_pred EEEEeCC
Q psy4956 354 VKTVSGK 360 (361)
Q Consensus 354 V~a~~~~ 360 (361)
|+|++..
T Consensus 85 V~A~N~~ 91 (112)
T 1bpv_A 85 VIAKNAA 91 (112)
T ss_dssp EEEECTT
T ss_pred EEEEECC
Confidence 9999863
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.5e-09 Score=85.75 Aligned_cols=169 Identities=11% Similarity=0.063 Sum_probs=103.1
Q ss_pred CCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEe----ecCccceEEec--CCCCCceEEEEEEEecCCcCccce
Q psy4956 8 VHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYV----SRDIKDNIEFS--EGLPGTKYDFYLYYTNSTVHDWLT 81 (361)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~----~~~~~~~~~i~--~L~p~t~Y~i~V~a~~~~~~~~~~ 81 (361)
.....|..+|-......-..|.+.|+-...........+ ..+....+.+. .+.....|.|.|++. .+.. .+
T Consensus 48 ~~~~~l~CtW~~g~~~~~t~y~l~y~~~~~~~~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~i~V~~~--~g~~-~s 124 (247)
T 2erj_C 48 FNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQDP--REPR-RQ 124 (247)
T ss_dssp ETTSEEEEECCTTSSSSCCCCEEEEEESSSSCCCCEECCSEEESSSSEEEEEEEGGGCCTTSCEEEEEECS--SCTT-CE
T ss_pred CCCCEEEEEEcCCCCCCCeeEEEEEEECCCCCCcceeCCCccccCCcceEEEeCCCCcceeeEEEEEEEEC--CCcc-cc
Confidence 345567777755433335789998865322111122221 11223355554 444567899998652 2121 12
Q ss_pred eeEEEe----cCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcE
Q psy4956 82 WTASIT----TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGS 157 (361)
Q Consensus 82 ~~~~~~----t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 157 (361)
....+. ..|+||.+|.+.......+.|+|++|.......|+|+|+...+..|. ...+ .... .+.|.+|.|++.
T Consensus 125 ~~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~-~~~~-~~~~-~~~l~~L~p~~~ 201 (247)
T 2erj_C 125 ATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWT-EQSV-DYRH-KFSLPSVDGQKR 201 (247)
T ss_dssp EEEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCE-EEEE-CSSC-EEEESCCCTTSC
T ss_pred ceEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCE-EEec-CCce-EEEecCCCCCCE
Confidence 222222 35999999999887778999999998643445899999986543343 3333 2344 899999999999
Q ss_pred EEEEEEEEeCC------CCcccceeeeeccC
Q psy4956 158 YQVQLFSVYDS------KESVAYTSRNFTTK 182 (361)
Q Consensus 158 Y~v~v~a~~~~------~~s~~~~~~~~~t~ 182 (361)
|.|+|++.... ..|..+....+.+.
T Consensus 202 Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~ 232 (247)
T 2erj_C 202 YTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 232 (247)
T ss_dssp EEEEEEEEECSSSCCCCCCCCCCCCEEECC-
T ss_pred EEEEEEEEeCCCCCCCCccCCCCcCEEEECC
Confidence 99999999843 24445444555554
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=6.8e-10 Score=78.95 Aligned_cols=86 Identities=15% Similarity=0.240 Sum_probs=66.2
Q ss_pred CCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
+|.++.+.. +.+++.|+|++|. ++.+.+|+|.|+..+.... . .+....+ .+.+. |.+++.|.|+|+|.+.
T Consensus 21 ~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~-~--~~~~~~~-~~~~~-L~~~t~Y~~~V~A~n~ 94 (117)
T 1wj3_A 21 PPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV-Q--VLNTNKT-SAELV-LPIKEDYIIEVKATTD 94 (117)
T ss_dssp CCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSC-E--EEEESSS-EEEEE-CCCSSCEEEEEEEEES
T ss_pred CCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCC-e--EEeCCCc-EEEEE-CCCCCEEEEEEEEECC
Confidence 567788776 8889999999983 6789999999988654322 2 2233344 78787 9999999999999999
Q ss_pred CCCcccceeeeeccCC
Q psy4956 168 SKESVAYTSRNFTTKP 183 (361)
Q Consensus 168 ~~~s~~~~~~~~~t~p 183 (361)
.|.+..+....++|..
T Consensus 95 ~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 95 GGDGTSSEQIRIPRIT 110 (117)
T ss_dssp SCCCCBCCCEEECCCC
T ss_pred CccCCCCCCEEEEcCC
Confidence 9998776566676653
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=99.12 E-value=6.8e-09 Score=81.44 Aligned_cols=154 Identities=10% Similarity=0.074 Sum_probs=96.9
Q ss_pred CCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEE----eecCccceEEecC--CCCCceEEEEEEEecCCcCccce
Q psy4956 8 VHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTY----VSRDIKDNIEFSE--GLPGTKYDFYLYYTNSTVHDWLT 81 (361)
Q Consensus 8 ~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~----~~~~~~~~~~i~~--L~p~t~Y~i~V~a~~~~~~~~~~ 81 (361)
.....|..+|-.........|.+.|+............ ...+....+.+.. +.....|.|.|.+ +.|. ..+
T Consensus 10 ~~~~~~~C~W~~~~~~~~~~y~l~y~~~~~~~~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~--~~g~-~~s 86 (199)
T 2b5i_C 10 FNVEYMNCTWQSSSEPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD--PREP-RRQ 86 (199)
T ss_dssp ETTTEEEEECCCCSSSSCCCCEEEEEETTSSSCCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC--SSCT-TCE
T ss_pred CCCcEEEEEecCCCcCCCceEEEEEEECCCCCCccccCCCccccCCceeEEEECCcccccceEEEEEEEe--CCcc-eec
Confidence 34567788885544333578999887532111112221 1122234555544 4455688888864 2312 122
Q ss_pred eeEEEe----cCCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcE
Q psy4956 82 WTASIT----TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGS 157 (361)
Q Consensus 82 ~~~~~~----t~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 157 (361)
....+. ..|+||.+|.+.......+.|+|++|.......|+|+|+...+..|. ...+ ...+ .+.|.+|.|++.
T Consensus 87 ~~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~-~~~~-~~~~-~~~l~~l~p~~~ 163 (199)
T 2b5i_C 87 ATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWT-EQSV-DYRH-KFSLPSVDGQKR 163 (199)
T ss_dssp EEEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCE-EEEE-CSSC-EEEECSCCTTSC
T ss_pred ceEEEchHHceecCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecCCcccE-EEec-cCce-EEEecCCCCCcE
Confidence 222222 25999999999887778999999998633445899999986543343 3333 2345 899999999999
Q ss_pred EEEEEEEEeC
Q psy4956 158 YQVQLFSVYD 167 (361)
Q Consensus 158 Y~v~v~a~~~ 167 (361)
|.|+|++...
T Consensus 164 Y~vqVR~~~~ 173 (199)
T 2b5i_C 164 YTFRVRSRFN 173 (199)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEecc
Confidence 9999999974
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-10 Score=81.57 Aligned_cols=98 Identities=19% Similarity=0.278 Sum_probs=70.0
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCC-CCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
...|.+|.++.+...+.+++.|.|.++.. .+.+.+|.|+|+..+. ..+...... ...+.+.+.+|.|++.|.|+
T Consensus 13 ~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~fr 88 (117)
T 1uem_A 13 SDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH----VKTTLYTVRGLRPNTIYLFM 88 (117)
T ss_dssp CCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEE----ECSSEEEECSCCTTCEEEEE
T ss_pred CCCccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccc----cCcCEEEECCCCCCCEEEEE
Confidence 44588899999998999999999987742 2568899999987542 222221111 12478999999999999999
Q ss_pred EEEEeCCCCCCceEE--EEecCCCCC
Q psy4956 258 VQTVSEDEISTPTTA--QYRTIPLRP 281 (361)
Q Consensus 258 V~a~~~~~~s~~~~~--~~~t~~~~p 281 (361)
|+|.|..|.+.+... .+.+.+.+|
T Consensus 89 V~A~n~~G~s~~S~~~~~v~t~~~~P 114 (117)
T 1uem_A 89 VRAINPQGLSDPSPMSDPVRTQDSGP 114 (117)
T ss_dssp EEEEETTEEEEECCCCCCEECCCSSC
T ss_pred EEEECCCccCCCcCCCccEEccCCCC
Confidence 999999887644332 244544444
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=6.4e-10 Score=80.53 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=70.4
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC--C------c--ceEEEEEEeCCCCCC-ceeEEeeccCCCCCcEEEecCCCCC
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA--S------I--YTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPG 251 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~--~------~--~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~p~ 251 (361)
|.+...+.+...+.+++.|+|.+|... + . +..|.|.|...+... ....... ..+.+.|.+|+|+
T Consensus 18 ~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~g-----~~ts~~v~~L~P~ 92 (137)
T 1wk0_A 18 LSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVG-----EETNITLNDLKPA 92 (137)
T ss_dssp TTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEE-----SCSEEEECSCCTT
T ss_pred cCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEec-----CccEEEEcCCCCC
Confidence 566778888999999999999886433 2 2 479999997754322 2222222 2489999999999
Q ss_pred CeEEEEEEEEeCCCCCCceE-EEEecC---CCCCccceE
Q psy4956 252 RAYNISVQTVSEDEISTPTT-AQYRTI---PLRPLSFTY 286 (361)
Q Consensus 252 t~Y~v~V~a~~~~~~s~~~~-~~~~t~---~~~p~~l~~ 286 (361)
+.|.|+|+|.+..|.+.++. +.+.|. |.+|.++++
T Consensus 93 T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l 131 (137)
T 1wk0_A 93 MDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRI 131 (137)
T ss_dssp CEECEEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCC
T ss_pred CEEEEEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEE
Confidence 99999999999887665433 345554 555666665
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.3e-10 Score=79.72 Aligned_cols=93 Identities=14% Similarity=0.144 Sum_probs=66.4
Q ss_pred CCCCc-ceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 183 PNTPG-KFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 183 p~~p~-~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
|.+|. ++.....+.+++.|.|+++... +.+.+|.|+|+..+...+...... ..+.+.+.+|.|++.|.|+|+|
T Consensus 10 P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2db8_A 10 PATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVG-----KETMCTVDGLHFNSTYNARVKA 84 (110)
T ss_dssp CCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEEEE-----SCSCEEEECCCSSSCCEEEEEE
T ss_pred CCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEEeC-----CcCEEEECCCCCCCEEEEEEEE
Confidence 44443 3444445789999999987544 678899999987654444333321 2478999999999999999999
Q ss_pred EeCCCCCCceE-EEEecCCCC
Q psy4956 261 VSEDEISTPTT-AQYRTIPLR 280 (361)
Q Consensus 261 ~~~~~~s~~~~-~~~~t~~~~ 280 (361)
.|..|.+.++. +.+.|.+.+
T Consensus 85 ~n~~G~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 85 FNKTGVSPYSKTLVLQTSEGS 105 (110)
T ss_dssp ECSSCBCCCCSCEECCCCCCC
T ss_pred EeCCcCCCCCCCEEEEcCCCC
Confidence 99998886654 445555443
|
| >3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C | Back alignment and structure |
|---|
Probab=99.09 E-value=4.6e-07 Score=76.04 Aligned_cols=242 Identities=12% Similarity=0.053 Sum_probs=139.6
Q ss_pred EEEeCCCceEEEEecCCCCCC--CcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCc--
Q psy4956 3 IIVHGVHGANLVIKIPENLSS--DNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHD-- 78 (361)
Q Consensus 3 ~~~~~~~~~~l~~~~p~~~~~--~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~-- 78 (361)
|...+.+...|.|+.|..... .-..|.|+|+......+ . ... ........|..| |.++|++....+.+
T Consensus 20 i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~~~w--~--~~~--t~~~~~~~L~~~--~~~rVrt~~~~~~s~~ 91 (317)
T 3qt2_A 20 IKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDY--E--TRI--TESKAVTILHMG--FSASVRTILQNDHSLL 91 (317)
T ss_dssp EEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSCEEE--E--ESS--SEEEEECCCTTC--EEEEEEEEEECSSCEE
T ss_pred EEECCCceEEEEECCCCccccCcCcEEEEEEECCCCCccc--E--eec--cccccccccCCC--eEEEEEEEECCCCCcc
Confidence 444556777788888543332 35789999988432211 1 111 233346677665 88888875433221
Q ss_pred cceeeEE-EecC----CCCCCccEEEEEe-----------CCEEEEEeeCCCCCC-cccEEEEEEECCCCCCCeEE-eec
Q psy4956 79 WLTWTAS-ITTP----PDPPTNLSVNVRS-----------GKTAQIFWSPPISGK-YSGFKLKVISLSEKTPPRII-GFT 140 (361)
Q Consensus 79 ~~~~~~~-~~t~----~~~p~~l~~~~~~-----------~~~v~l~W~~p~~~~-~~~y~v~~~~~~~~~~~~~~-~~~ 140 (361)
...+... .... +..|.+|.-.... ...+..+|.+..... ...|.+.|+..+ ....+. ...
T Consensus 92 ~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~~~~~t~Y~L~y~~~~--~~~eC~~y~~ 169 (317)
T 3qt2_A 92 ASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTDAPEDTQYFLYYRYGS--WTEECQEYSM 169 (317)
T ss_dssp ECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTTCCTTCEEEEEEEETT--EEEECCCEEE
T ss_pred ccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCCCCCCeeEEEEEEeCC--CCeeCCcccc
Confidence 1122222 2222 3456777665544 367999999855433 457999988743 122221 111
Q ss_pred CC--CCceEEEcCCC----CCcEEEEEEEEEeCCCCcccceeeee----ccCCCCCcceEEEeccCCeEEEEeecCCCC-
Q psy4956 141 EN--PPAGYSLKDLT----PGGSYQVQLFSVYDSKESVAYTSRNF----TTKPNTPGKFIVWFRNETTLLVLWQPSYPA- 209 (361)
Q Consensus 141 ~~--~~~~~~l~~L~----p~~~Y~v~v~a~~~~~~s~~~~~~~~----~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~- 209 (361)
.. .+..+.|.... ....|.|.|.+.+..+.... ....+ .-.|.||.+|.+... ...+.|+|++|...
T Consensus 170 ~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i~s-~~~~~~l~~iVkp~PP~nL~v~~~-~~~l~v~W~~P~~~~ 247 (317)
T 3qt2_A 170 DTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIRP-FDQLFALHAIDQINPPLNVTAEIE-GTRMSIQWEKPVSAF 247 (317)
T ss_dssp CTTSCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCBCC-EEEEEEHHHHBCCCCCEEEEEEEE-TTEEEEEEECCSSSS
T ss_pred CCCcceeEEEeCCccccccCcEEEEEEEEcCCCCccccc-cceEEEHHHcCcCCCCceeEEEEe-CCcEEEEECCCCccc
Confidence 11 11267776542 34678888886654433221 11112 245889999998854 57999999876422
Q ss_pred -CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 210 -SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 210 -~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
.....|.|.|+..+....... ... .+.+.+ +|.|++.|.|+|+|...
T Consensus 248 ~~~~L~Yevryr~~~~~~~~~~-~~~-----~~~~~l-~l~p~~~Y~vqVR~k~~ 295 (317)
T 3qt2_A 248 PIHCFDYEVKIHNTRNGYLQIE-KLM-----TNAFIS-IIDDLSKYDVQVRAAVS 295 (317)
T ss_dssp CGGGEEEEEEEEETTTCCEEEE-EES-----SSEEEE-ECCTTCCEEEEEEEEEC
T ss_pred ccCceEEEEEEEeCCCCcceEE-EEe-----eeEEEe-ecCCCCEEEEEEEEeec
Confidence 234589999987543332211 111 255655 49999999999999864
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-09 Score=84.92 Aligned_cols=77 Identities=17% Similarity=0.257 Sum_probs=62.1
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEE
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTV 357 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 357 (361)
+.+|.++.+ ...+.+++.|+|++|.+ .+.+|+|.|.+.+.... ..........+++++.+ |+|++.|.|+|+|+
T Consensus 104 ~~~P~~l~v--~~~t~~si~l~W~~p~~--~i~~Y~v~y~~~~~~~~-~~~~~v~~~~t~~~l~g-L~p~t~Y~~~V~A~ 177 (195)
T 2qbw_A 104 SSVPTNLEV--VAATPTSLLISWDASYY--GVSYYRITYGETGGNSP-VQEFTVPYSSSTATISG-LKPGVDYTITVYAY 177 (195)
T ss_dssp CCSSCCCEE--EEEETTEEEEECCCCCS--SCSEEEEEEEETTCCSC-CEEEEEETTCSEEEECS-CCTTCEEEEEEEEE
T ss_pred CCCCcccEE--EeCCCCEEEEEEeCCCC--CccEEEEEEEECCCCCc-ceEEEeCCCCCEEEeCC-CCCCCEEEEEEEEE
Confidence 457889999 89999999999999987 79999999988754321 22233456678999996 99999999999998
Q ss_pred eCC
Q psy4956 358 SGK 360 (361)
Q Consensus 358 ~~~ 360 (361)
+..
T Consensus 178 ~~~ 180 (195)
T 2qbw_A 178 SDY 180 (195)
T ss_dssp SST
T ss_pred eCC
Confidence 753
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-09 Score=75.35 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=65.3
Q ss_pred cCCCCCcceEEEeccCCeEEEEe--ecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLW--QPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W--~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
..|.+|.+|++...+.++|.|+| .++... +. .+|.|.|+... .... .... ...+.|.+|.|++.|.|+
T Consensus 8 ~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~-~~Y~v~y~~~~--~~~~-~~~~-----~~~~~i~~L~p~t~Y~f~ 78 (107)
T 1x5a_A 8 AESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGN-LSYELHVLNQD--EEWH-QMVL-----EPRVLLTKLQPDTTYIVR 78 (107)
T ss_dssp CCCCCSCCCCEEEEETTEEEEECCCCCSSCCSSC-CEEEEEEECSS--CEEE-EEES-----SSEEEEESCCSSCEEEEE
T ss_pred CCCCCCCceEEEecCCCEEEEEECCCCCCCCCCc-eEEEEEEEeCC--CCce-EEEe-----cceEEECCCCCCCEEEEE
Confidence 34778889999999999999999 776433 55 99999998761 1111 1111 134999999999999999
Q ss_pred EEEEeCCCCCCceE-EEEecCC
Q psy4956 258 VQTVSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 258 V~a~~~~~~s~~~~-~~~~t~~ 278 (361)
|+|.+..|.+..+. +.+.|.+
T Consensus 79 V~A~~~~G~g~~S~~~~~~T~~ 100 (107)
T 1x5a_A 79 VRTLTPLGPGPFSPDHEFRTSP 100 (107)
T ss_dssp EEEECSSSCCCCCCCEEEECCC
T ss_pred EEEECCCccCCCCCCEEEEECC
Confidence 99999888765433 4455544
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=3.3e-10 Score=80.22 Aligned_cols=81 Identities=22% Similarity=0.360 Sum_probs=56.3
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECC-CCCCCeEEeec-----------CCCCceEEEcCCCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLS-EKTPPRIIGFT-----------ENPPAGYSLKDLTP 154 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~-~~~~~~~~~~~-----------~~~~~~~~l~~L~p 154 (361)
.|.+|. +...+.+++.|+|++|. ..++.+|.|+|+..+ ...|....... .... .+.+.+|.|
T Consensus 5 pP~~P~---v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~v~~L~p 80 (115)
T 2ic2_A 5 PPTPPN---VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSF-TASVTDLKP 80 (115)
T ss_dssp CCCCCE---EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEE-EEEECSCCS
T ss_pred CCCcCE---eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCcee-EEEeCCCCC
Confidence 466664 66778999999999876 345889999999863 23444332211 1123 789999999
Q ss_pred CcEEEEEEEEEeCCCCccc
Q psy4956 155 GGSYQVQLFSVYDSKESVA 173 (361)
Q Consensus 155 ~~~Y~v~v~a~~~~~~s~~ 173 (361)
++.|.|+|+|.|..|.+.+
T Consensus 81 ~t~Y~FRV~A~N~~G~~~p 99 (115)
T 2ic2_A 81 QHTYRFRILAVYSNNDNKE 99 (115)
T ss_dssp SEEEEEEEEEEETTSCEEE
T ss_pred CCEEEEEEEEEeCCCCCCC
Confidence 9999999999999887654
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.07 E-value=7.8e-10 Score=68.02 Aligned_cols=73 Identities=22% Similarity=0.216 Sum_probs=64.5
Q ss_pred EEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccC
Q psy4956 108 IFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 108 l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~ 182 (361)
++|.+|....++.|.+.|++.+.....++..++...+ +|+|.||+||..|.+++.++...+.++. ....|+|.
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev~IPgh~n-SYtIsGLkPGvtYegQLisV~r~g~~Ev-trfdfTT~ 74 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLN-SYTIKGLKPGVVYEGQLISIQQYGHQEV-TRFDFTTT 74 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEEEECSSSS-CCCCCCCCTTCCEEEEEEEECTTSCCCE-EEEEECSS
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEEEcCCccc-eEEEeccCCCcEEEEEEEeeeecccCCc-eEEEEEec
Confidence 5799887788999999999988888889999999888 9999999999999999999998888865 55667665
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-09 Score=77.51 Aligned_cols=85 Identities=14% Similarity=0.163 Sum_probs=56.6
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCC-CCCceeEEeec--------cCCCCCcEEEecCCCCC
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPD-APESVLYVEKE--------GEPPGPAQAAFKGLVPG 251 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~L~p~ 251 (361)
.|.+|. +...+.+++.|.|.++... ..+.+|.|+|+..+ ...+....... ......+.+.+.+|.|+
T Consensus 5 pP~~P~---v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~ 81 (115)
T 2ic2_A 5 PPTPPN---VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 81 (115)
T ss_dssp CCCCCE---EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSS
T ss_pred CCCcCE---eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCC
Confidence 355664 6678899999999887544 56889999998863 23343222111 01122357899999999
Q ss_pred CeEEEEEEEEeCCCCCCc
Q psy4956 252 RAYNISVQTVSEDEISTP 269 (361)
Q Consensus 252 t~Y~v~V~a~~~~~~s~~ 269 (361)
+.|.|+|.|.|..|.+.+
T Consensus 82 t~Y~FRV~A~N~~G~~~p 99 (115)
T 2ic2_A 82 HTYRFRILAVYSNNDNKE 99 (115)
T ss_dssp EEEEEEEEEEETTSCEEE
T ss_pred CEEEEEEEEEeCCCCCCC
Confidence 999999999999886533
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-08 Score=80.71 Aligned_cols=181 Identities=16% Similarity=0.126 Sum_probs=96.1
Q ss_pred EEeCCCceEEEEecCCCCC-CCcceEEEEEEcCCCCCCCCeEEeecCc---cceEEe--cCCCCCceEEEEEEEecCCcC
Q psy4956 4 IVHGVHGANLVIKIPENLS-SDNSTYRLDYIPAHGHPPPNTTYVSRDI---KDNIEF--SEGLPGTKYDFYLYYTNSTVH 77 (361)
Q Consensus 4 ~~~~~~~~~l~~~~p~~~~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~---~~~~~i--~~L~p~t~Y~i~V~a~~~~~~ 77 (361)
.+......+|...|-.... +.-..|.+.|+...+. ......+.... ...+.+ ..+.....|.|.|.+.+.. .
T Consensus 8 ~C~~~~~~~~~C~W~~~~~~~~~~~~~l~y~~~~~~-~~~~~C~~~~~~~~~~~C~~~~~~~~~~~~~~i~v~~~~~~-~ 85 (207)
T 1iar_B 8 TCVSDYMSISTCEWKMNGPTNCSTELRLLYQLVFLL-SEAHTCIPENNGGAGCVCHLLMDDVVSADNYTLDLWAGQQL-L 85 (207)
T ss_dssp EEEECSSSEEEEEEEESSCCCHHHHEEEEEEESSSS-CCCEEECCEESSSSEEEEEEECSCCCTTCCEEEEEEETTEE-E
T ss_pred cEEECCCceEEEEecCCCCCCCCcCEEEEEEeccCC-CCCccCcCccCcccceEEEEeCcccccceEEEEEEEeCCcc-c
Confidence 3444556678777744333 2346899999864221 12333332111 123444 4456677899999663221 1
Q ss_pred ccceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCCC-----CcccEEEEEEECCCCCCCeEEeecCCCC-ceEEEcC
Q psy4956 78 DWLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPISG-----KYSGFKLKVISLSEKTPPRIIGFTENPP-AGYSLKD 151 (361)
Q Consensus 78 ~~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~-----~~~~y~v~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 151 (361)
........-...|+||.+|.+....+..+.|+|++|... ....|+|+|+..+.........+..... ..+.+.+
T Consensus 86 ~~~~f~~~~iVkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (207)
T 1iar_B 86 WKGSFKPSEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAAST 165 (207)
T ss_dssp EEEEECGGGSBCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC--
T ss_pred ccccEeeccccccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhheeeeeecCCcEEEEEHHH
Confidence 111111111346999999998854556899999987521 1347999999865432222233333333 1344468
Q ss_pred CCCCcEEEEEEEEEeC---CCCcccceeeeeccCCCCC
Q psy4956 152 LTPGGSYQVQLFSVYD---SKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 152 L~p~~~Y~v~v~a~~~---~~~s~~~~~~~~~t~p~~p 186 (361)
|.||+.|.|+|++... +..|..+....+.+.+..|
T Consensus 166 L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~~p 203 (207)
T 1iar_B 166 LKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYREP 203 (207)
T ss_dssp ---CCCEEEEEEEECGGGTCCCCCCCCCEEEC------
T ss_pred CCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCCcc
Confidence 9999999999999964 3456666666777664433
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=8.6e-09 Score=69.12 Aligned_cols=81 Identities=15% Similarity=0.247 Sum_probs=61.2
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
..|.+|.++.+...+.+++.|+|.++. ++.+.+|+|.. ++ .....+ ... ++.+.+|.|++.|.|+|+|.+
T Consensus 2 ~~P~~P~~l~~~~~~~~sv~L~W~~~~~~~~i~~Y~v~~---~~---~~~~~~--~~~-~~~~~~L~~~t~Y~~~V~A~n 72 (88)
T 1k85_A 2 MAPTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYN---GT---ALATTV--TGT-TATISGLAADTSYTFTVKAKD 72 (88)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCSSEEEEEEEE---SS---SEEEEE--SSS-EEEECCCCSSCEEEEEEEEEE
T ss_pred cCcCCCCccEEEeccCCEEEEEECCCCCCCCccEEEEEE---CC---EEEeec--CCC-EEEeCCCCCCCEEEEEEEEEe
Confidence 367889999999989999999999976 34688999963 11 122222 335 899999999999999999999
Q ss_pred CCCC-cccceee
Q psy4956 167 DSKE-SVAYTSR 177 (361)
Q Consensus 167 ~~~~-s~~~~~~ 177 (361)
..|. +..+...
T Consensus 73 ~~G~~s~~S~~v 84 (88)
T 1k85_A 73 AAGNVSAASNAV 84 (88)
T ss_dssp TTTEECCCCCCE
T ss_pred CCCCcCCCCCCE
Confidence 8776 4433333
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=98.98 E-value=2.2e-09 Score=84.75 Aligned_cols=164 Identities=13% Similarity=0.144 Sum_probs=91.7
Q ss_pred CcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC-CCceeEEeeccCCCCCcEEEe--cCCCCCCeEEEEEEEEe
Q psy4956 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA-PESVLYVEKEGEPPGPAQAAF--KGLVPGRAYNISVQTVS 262 (361)
Q Consensus 186 p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~L~p~t~Y~v~V~a~~ 262 (361)
+.+|.........+...|++....+.-..|.+.|....+ ........... ......+.| ..+.....|.|.|.+.+
T Consensus 4 ~~~l~C~~~~~~~~~C~W~~~~~~~~~~~~~l~y~~~~~~~~~~~C~~~~~-~~~~~~C~~~~~~~~~~~~~~i~v~~~~ 82 (207)
T 1iar_B 4 LQEPTCVSDYMSISTCEWKMNGPTNCSTELRLLYQLVFLLSEAHTCIPENN-GGAGCVCHLLMDDVVSADNYTLDLWAGQ 82 (207)
T ss_dssp EEEEEEEECSSSEEEEEEEESSCCCHHHHEEEEEEESSSSCCCEEECCEES-SSSEEEEEEECSCCCTTCCEEEEEEETT
T ss_pred CCCCcEEECCCceEEEEecCCCCCCCCcCEEEEEEeccCCCCCccCcCccC-cccceEEEEeCcccccceEEEEEEEeCC
Confidence 457788777778999999987433334578888875421 11111111111 111123444 44566778999996621
Q ss_pred CCCCCCceEEEE----ecCCCCCccceEEeeecCCceEEEEeeCCCCC----CCceeEEEEEEECCCCCCCCceeec--C
Q psy4956 263 EDEISTPTTAQY----RTIPLRPLSFTYDKASITSNSLRVVWEPPKGF----SEFDKYQVSINVRRPGASSTPITKS--R 332 (361)
Q Consensus 263 ~~~~s~~~~~~~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~----~~~~~y~i~~~~~~~~~~~~~~~~~--~ 332 (361)
. ......+ ...|+||.+|.+ .....+.+.|+|.+|... .....|+|+|+..+.. ........ .
T Consensus 83 --~--~~~~~~f~~~~iVkp~PP~nl~~--~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~-~~~~~~~~~~~ 155 (207)
T 1iar_B 83 --Q--LLWKGSFKPSEHVKPRAPGNLTV--HTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDP-ADFRIYNVTYL 155 (207)
T ss_dssp --E--EEEEEEECGGGSBCCCCCEEEEE--C----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSC-SCEEEEEECSS
T ss_pred --c--ccccccEeeccccccCCCCCeEE--EEccCCCEEEEECCCCCccccccccEEEEEEEccCCCc-hhheeeeeecC
Confidence 1 1111122 346899999999 544456899999987431 1245799999987542 22111222 2
Q ss_pred CCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 333 DEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 333 ~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.....+.+.+ |.||+.|.|+|+|..
T Consensus 156 ~~~~~~~~~~-L~p~~~Y~vqVR~k~ 180 (207)
T 1iar_B 156 EPSLRIAAST-LKSGISYRARVRAWA 180 (207)
T ss_dssp CCEEEECC------CCCEEEEEEEEC
T ss_pred CcEEEEEHHH-CCCCCEEEEEEEEec
Confidence 3333455555 999999999999985
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-07 Score=74.99 Aligned_cols=168 Identities=11% Similarity=0.161 Sum_probs=91.8
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE------
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV------ 258 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V------ 258 (361)
.+.+|.........|...|.+.. ......|.+.+............... .......+.+.--.+ ..|.+.+
T Consensus 4 ~~~nlsC~~~~~~~l~C~W~~~~-~~~~t~~~l~~~~~~~~~~~~C~~~~-~~~~~~~C~~~~~~~-~~~~v~~~~~~g~ 80 (214)
T 2b5i_B 4 GTSQFTCFYNSRAQISCVWSQDG-ALQDTSCQVHAWPDRRRWQQTCELLP-VSQASWACNLILGAP-DSQKLTTVDIVTL 80 (214)
T ss_dssp --CEEEEEECSSSEEEEEEEC-------CCEEEEEEETTSSCCEEEECEE-CSTTCEEEEEECSST-TCCCCCTTCCEEE
T ss_pred CCCCCEEEECCcceeEEEecCCC-CCCceeEEEEEEcCCCCccceeeecC-CCCcceEEEecCCCC-CcEEEEEEeeccc
Confidence 35788888777789999998762 23356677766533221111111110 011123333321111 1221111
Q ss_pred EEEeCCCCCCceEEEEecCC------CCCccceEEeeecCCceEEEEeeCCCCC---CCceeEEEEEEECCCCCCCC-ce
Q psy4956 259 QTVSEDEISTPTTAQYRTIP------LRPLSFTYDKASITSNSLRVVWEPPKGF---SEFDKYQVSINVRRPGASST-PI 328 (361)
Q Consensus 259 ~a~~~~~~s~~~~~~~~t~~------~~p~~l~~~~~~~~~~si~l~W~~~~~~---~~~~~y~i~~~~~~~~~~~~-~~ 328 (361)
......|............| .||.+|.+ ...+.+.+.|+|..|... ..+..|+|+|+..+. .+.. ..
T Consensus 81 ~~~~~~~~~~~~~~~~~vkP~~~vk~~pP~~l~~--~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~~~ 157 (214)
T 2b5i_B 81 RVLCREGVRWRVMAIQDFKPFENLRLMAPISLQV--VHVETHRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEAPL 157 (214)
T ss_dssp EEEECCTTSCEEEEEEEECGGGSBCCCCCEEEEE--EEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTSCC
T ss_pred eeccccccceeeeeecccccccccCCCCCceEEE--EEecCCeEEEEECCCCccccCCCceEEEEEEecCCC-Chheeee
Confidence 11111122112233333456 89999999 667778999999997531 135689999998753 2221 11
Q ss_pred eecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 329 TKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.......+++.+.+ |+||+.|.|+|+|...
T Consensus 158 ~~~~~~~~~~~l~~-L~p~t~Y~vqVRa~~~ 187 (214)
T 2b5i_B 158 LTLKQKQEWICLET-LTPDTQYEFQVRVKPL 187 (214)
T ss_dssp EEECSCCCEEEECS-CCTTCEEEEEEEEEES
T ss_pred eeecccceEEEecc-CCCCCEEEEEEEEeeC
Confidence 22334567899986 9999999999999864
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.2e-08 Score=71.54 Aligned_cols=77 Identities=19% Similarity=0.309 Sum_probs=59.8
Q ss_pred cCCCCCCccEEEEEe--CCEEEEEeeCCCC-----CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 88 TPPDPPTNLSVNVRS--GKTAQIFWSPPIS-----GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 88 t~~~~p~~l~~~~~~--~~~v~l~W~~p~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
..|+||.++.+.... .+.+.|+|++|.. +.+..|+|+|+..+...+.... . ...+ ++.|.+|.|++.|.|
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~-~-~~~~-~~~l~~L~p~t~Y~~ 82 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE-L-SNGT-AHTITDAYAGKEYII 82 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE-E-SSCS-EEEETTCCSSSCEEE
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEe-c-ccCC-EEEEeCCCCCCEEEE
Confidence 368899999988754 4799999999863 4467999999987654444322 2 2345 899999999999999
Q ss_pred EEEEEeC
Q psy4956 161 QLFSVYD 167 (361)
Q Consensus 161 ~v~a~~~ 167 (361)
+|+|.+.
T Consensus 83 ~VRa~~~ 89 (109)
T 1uc6_A 83 QVAAKDN 89 (109)
T ss_dssp EEECCBS
T ss_pred EEEEEeC
Confidence 9999974
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.8e-08 Score=67.49 Aligned_cols=74 Identities=18% Similarity=0.257 Sum_probs=58.6
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.|.+|.+|.+.....+++.|+|+++...+.+.+|.|.. . + . ...... .+.+.+.+|.|++.|.|+|+|+
T Consensus 3 ~P~~P~~l~~~~~~~~sv~L~W~~~~~~~~i~~Y~v~~-~--~-~--~~~~~~-----~~~~~~~~L~~~t~Y~~~V~A~ 71 (88)
T 1k85_A 3 APTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYN-G--T-A--LATTVT-----GTTATISGLAADTSYTFTVKAK 71 (88)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSCCSSEEEEEEEE-S--S-S--EEEEES-----SSEEEECCCCSSCEEEEEEEEE
T ss_pred CcCCCCccEEEeccCCEEEEEECCCCCCCCccEEEEEE-C--C-E--EEeecC-----CCEEEeCCCCCCCEEEEEEEEE
Confidence 57889999999989999999999875445688999974 2 1 1 111111 3789999999999999999999
Q ss_pred eCCCC
Q psy4956 262 SEDEI 266 (361)
Q Consensus 262 ~~~~~ 266 (361)
+..|.
T Consensus 72 n~~G~ 76 (88)
T 1k85_A 72 DAAGN 76 (88)
T ss_dssp ETTTE
T ss_pred eCCCC
Confidence 98875
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=98.93 E-value=7.5e-08 Score=75.93 Aligned_cols=169 Identities=12% Similarity=0.062 Sum_probs=99.6
Q ss_pred EEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEE--ecC
Q psy4956 12 NLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASI--TTP 89 (361)
Q Consensus 12 ~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~--~t~ 89 (361)
.|...|... ......|.+.+..... ...-..+.....--.....+|.--+.+.|.|.. |. ..+....+.. ...
T Consensus 38 ~~tc~~~~~-~~~~~~~~~~~~~~~~-~~~c~~~~~~~~~y~~~~~~~~l~~~~~i~V~l--G~-~~S~~~~f~l~~iVK 112 (223)
T 3up1_A 38 SLTCAFEDP-DVNTTNLEFEICGALV-EVKCLNFRKLQEIYFIETKKFLLIGKSNICVKV--GE-KSLTCKKIDLTTIVK 112 (223)
T ss_dssp EEEEEESST-TCCCTTEEEEEESSBB-SCSEEECEEETTEEEEEESCBCCSSEEEEEEEE--TT-EEEEEEEEEGGGSBC
T ss_pred EEEEecCCC-CCCCCceEEEEecccc-cccccccccccceEEeecCCEEEEeccEEEEEc--CC-ceeccEEEEecceEE
Confidence 455554333 4456667777764322 111222222222233445567666777877763 22 2222222222 346
Q ss_pred CCCCCccEEEEEe-CCEEEEEeeCCC--CCC--cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 90 PDPPTNLSVNVRS-GKTAQIFWSPPI--SGK--YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 90 ~~~p~~l~~~~~~-~~~v~l~W~~p~--~~~--~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
|+||.++.+.... ...+.|+|.+|. .+. ...|+|+|+............+..... .+.+.+|.|++.|.|+|||
T Consensus 113 PdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~~~t~~-~i~l~~L~Pgt~Y~vqVR~ 191 (223)
T 3up1_A 113 PEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNLSSTKL-TLLQRKLQPAAMYEIKVRS 191 (223)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEESSSEE-EEEGGGSCTTCEEEEEEEE
T ss_pred cCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEecCcee-EEeccccCCCcEEEEEEEE
Confidence 9999999988765 467999999975 222 468999999874222333333332221 4555799999999999999
Q ss_pred EeC----CCCcccceeeeeccCCCCC
Q psy4956 165 VYD----SKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 165 ~~~----~~~s~~~~~~~~~t~p~~p 186 (361)
... +.+|..+....+.|.+.+|
T Consensus 192 r~~~~~~G~WSeWS~~~~~~T~~~~P 217 (223)
T 3up1_A 192 IPDHYFKGFWSEWSPSYYFRTPEINN 217 (223)
T ss_dssp EECSSCCBCCCCCCCCEEEECCCCC-
T ss_pred eeCCCCCCCCCCCCCCeEEECCCCCC
Confidence 985 3466666667777766555
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=9.3e-09 Score=72.03 Aligned_cols=78 Identities=17% Similarity=0.192 Sum_probs=60.3
Q ss_pred cCCCCCcceEEEecc--CCeEEEEeecCCC----CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeE
Q psy4956 181 TKPNTPGKFIVWFRN--ETTLLVLWQPSYP----ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 181 t~p~~p~~l~~~~~~--~~~~~v~W~~~~~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 254 (361)
..|.||.++.+.... ..++.|+|++|.. .+.+..|.|.|+..+.......... ..+++.+.+|.|++.|
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~-----~~~~~~l~~L~p~t~Y 80 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS-----NGTAHTITDAYAGKEY 80 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES-----SCSEEEETTCCSSSCE
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc-----cCCEEEEeCCCCCCEE
Confidence 357899999998754 4789999998753 3567899999998765544332222 2478999999999999
Q ss_pred EEEEEEEeC
Q psy4956 255 NISVQTVSE 263 (361)
Q Consensus 255 ~v~V~a~~~ 263 (361)
.|+|+|.+.
T Consensus 81 ~~~VRa~~~ 89 (109)
T 1uc6_A 81 IIQVAAKDN 89 (109)
T ss_dssp EEEEECCBS
T ss_pred EEEEEEEeC
Confidence 999999974
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=98.92 E-value=6.9e-09 Score=94.69 Aligned_cols=85 Identities=12% Similarity=0.218 Sum_probs=72.0
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC-C--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI-S--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~-~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..|.||....+...+.+++.|+|.+|. + .++.+|.|+++..+...|.....+ ..+ .+++.+|.+|..|.|||+|
T Consensus 8 ~~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~--~~t-~~~V~~L~~g~~Y~FRV~A 84 (573)
T 3uto_A 8 PEPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS--RYT-YTTIEGLRAGKQYEFRIIA 84 (573)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEE--SSS-EEEECCCCTTCEEEEEEEE
T ss_pred CCCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccc--cCC-EEEeCCCCCCCcEeEEEEE
Confidence 368889899999999999999999986 2 368999999999877777766544 334 8999999999999999999
Q ss_pred EeCCCCcccce
Q psy4956 165 VYDSKESVAYT 175 (361)
Q Consensus 165 ~~~~~~s~~~~ 175 (361)
.|..|.|.++.
T Consensus 85 ~N~~G~s~PS~ 95 (573)
T 3uto_A 85 ENKHGQSKPCE 95 (573)
T ss_dssp EETTEECCCCC
T ss_pred EcCceEcCCcC
Confidence 99998887654
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=6.7e-08 Score=76.84 Aligned_cols=165 Identities=8% Similarity=0.070 Sum_probs=95.3
Q ss_pred cceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCC---CCCceeEEe-e--ccCCCCCcEEEe--cCCCCCCeEEEEE
Q psy4956 187 GKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPD---APESVLYVE-K--EGEPPGPAQAAF--KGLVPGRAYNISV 258 (361)
Q Consensus 187 ~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~---~~~~~~~~~-~--~~~~~~~~~~~~--~~L~p~t~Y~v~V 258 (361)
+||.........++..|++... .-..+.+.|.... ......... . .........+.| ..|..+..|.|.|
T Consensus 2 ~nl~C~~~~~~~ltC~W~~~~~--~~~~~~~~~~l~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~v~v 79 (219)
T 3tgx_A 2 PDLVCYTDYLQTVICILEMWNL--HPSTLTLTWQDQYEELKDEATSCSLHRSAHNATHATYTCHMDVFHFMADDIFSVQI 79 (219)
T ss_dssp CCEEEEECSSSEEEEEEECSSS--SCCEEEEEECCTTSCCTTSCCEEEEEEEEECSSEEEEEEECCGGGSCTTCEEEEEE
T ss_pred CCceEEeCCCeEEEEEEECCCC--cCceEEEEEEccccCCCCcccCCCCccccCCCCCcEEEEEEECccccccceEEEEE
Confidence 3677777777899999987532 2234555553211 111111111 0 000111234444 4577788898877
Q ss_pred EEEeCCCCCCceEE--EEecCCCCCccceEEeeecCCceEEEEeeCCCCC------CCceeEEEEEEECCCCCCCC----
Q psy4956 259 QTVSEDEISTPTTA--QYRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF------SEFDKYQVSINVRRPGASST---- 326 (361)
Q Consensus 259 ~a~~~~~~s~~~~~--~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~------~~~~~y~i~~~~~~~~~~~~---- 326 (361)
.+..+...+....+ ....+|+||.+|.+ .. .+.+.|+|..|... .....|+|+|+..+. .+..
T Consensus 80 ~~~~g~~~s~~~~f~~~~iVkp~PP~nltv--~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~ 154 (219)
T 3tgx_A 80 TDQSGQYSQECGSFLLAESIKPAPPFDVTV--TF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRR 154 (219)
T ss_dssp ECTTSSCEEEEEEEEGGGCBCCCCCEEEEE--EE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEE
T ss_pred EeCCCCEEecCceEeeeeeEEeCCCCceEE--Ee--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-Cceecccc
Confidence 55433222221111 11346889999999 42 46899999997431 134689999998863 3221
Q ss_pred ceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 327 PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.+.........+.+.+ |.||+.|.|+|+|...
T Consensus 155 ~~~~~~~~~~~~~~~~-L~p~t~Y~vqVRa~~~ 186 (219)
T 3tgx_A 155 KLISVDSRSVSLLPLE-FRKDSSYELQVRAGPM 186 (219)
T ss_dssp EEECSSCSEEEECTTS-SCSSCEEEEEEEEEEC
T ss_pred eeEecCCCEEEEEecc-CCCCCEEEEEEEEeeC
Confidence 1122223345666776 9999999999999864
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=5.1e-08 Score=62.31 Aligned_cols=77 Identities=22% Similarity=0.299 Sum_probs=67.8
Q ss_pred CCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeecc
Q psy4956 103 GKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 103 ~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t 181 (361)
.++-.+.|..+...++..|.+.|+.....+.+++..++...+ +|+|.||+|+..|+..|.+.+.-|.++.+ ...|+|
T Consensus 20 pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~Ip~h~n-SYtI~GL~P~~~YE~qv~S~~ryG~~Evs-~f~FtT 96 (98)
T 1oww_A 20 PNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLN-SYTIKGLKPGVVYEGQLISIQQYGHQEVT-RFDFTT 96 (98)
T ss_dssp TTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEEECSSCC-EEEECSCCSSEEEEEEEEEEESSSCEEEE-EEEEEE
T ss_pred CCccceEEecCCCCCceEEEEEEEEcCCCCceeEEEecCccc-eEEEecCCCCcEEEEEEEEeeccCcccce-EEEEEe
Confidence 678899999988888999999999987778888999998888 99999999999999999999999988764 555554
|
| >3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.1e-06 Score=73.61 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=65.8
Q ss_pred cEEEEEEEEEeCCCCcccceeeee----ccCCCCCcceEEEeccC-CeEEEEeecCCCC-C----cceEEEEEEeCCCCC
Q psy4956 156 GSYQVQLFSVYDSKESVAYTSRNF----TTKPNTPGKFIVWFRNE-TTLLVLWQPSYPA-S----IYTHYKVSIDPPDAP 225 (361)
Q Consensus 156 ~~Y~v~v~a~~~~~~s~~~~~~~~----~t~p~~p~~l~~~~~~~-~~~~v~W~~~~~~-~----~~~~y~v~~~~~~~~ 225 (361)
..|.|.|.|.+..|..... ..+ ..+|+||.+|.+..... ..+.|+|++|... . ....|.|+|+..+..
T Consensus 184 ~~y~~~V~A~n~lg~~s~~--~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~ 261 (306)
T 3d85_D 184 LPIEVMVDAVHKLKYEQYT--SSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKR 261 (306)
T ss_dssp SCEEEEEEEEETTEEEEEE--EEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC---
T ss_pred EEEEEEEEEEccCCccccc--eEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCC
Confidence 4799999999987754332 233 24599999999987444 7899999987421 1 235899999987654
Q ss_pred CceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCC
Q psy4956 226 ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEIS 267 (361)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s 267 (361)
......... .+++.+ .+++.|.|+|+|.+..+.+
T Consensus 262 ~~~~~~~~~-----~ts~~l---~~~~~Y~vqVRa~~~~~~G 295 (306)
T 3d85_D 262 EKKDRVFTD-----KTSATV---ICRKNASISVRAQDRYYSS 295 (306)
T ss_dssp ---CEEEES-----SSEEEE---CCCSSCEEEEEEEESSSCC
T ss_pred ccEEEeecc-----ccEEEE---eCCCeEEEEEEeccCCCCC
Confidence 333222221 256665 4699999999999865544
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.9e-07 Score=73.88 Aligned_cols=94 Identities=20% Similarity=0.206 Sum_probs=67.6
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCC----CcccEEEEEEECCCCCCCe--EEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISG----KYSGFKLKVISLSEKTPPR--IIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~----~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.||.++.+...+.+.+.|+|++|... ....|+|.|+..+. .|.. ...+....+ ++.|.+|.|++.|.|+|+|
T Consensus 107 ~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~~~~~~~~~~~-~~~l~~L~p~t~Y~vqVRa 184 (214)
T 2b5i_B 107 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEAPLLTLKQKQE-WICLETLTPDTQYEFQVRV 184 (214)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTSCCEEECSCCC-EEEECSCCTTCEEEEEEEE
T ss_pred CCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCC-Chheeeeeeecccce-EEEeccCCCCCEEEEEEEE
Confidence 99999999887778999999987632 24589999988643 2322 223344455 8999999999999999999
Q ss_pred EeCCC----CcccceeeeeccCCCCC
Q psy4956 165 VYDSK----ESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 165 ~~~~~----~s~~~~~~~~~t~p~~p 186 (361)
....+ .|..+....+.|.+..|
T Consensus 185 ~~~~~~~G~WS~WS~~~~~~T~~~~~ 210 (214)
T 2b5i_B 185 KPLQGEFTTWSPWSQPLAFRTKPAAL 210 (214)
T ss_dssp EESCCSSCCCCCCCCCEEEECCC---
T ss_pred eeCCCCCCCccCCCCCEEEEcCCCCc
Confidence 97532 35555566777776554
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.1e-08 Score=67.03 Aligned_cols=91 Identities=21% Similarity=0.300 Sum_probs=64.9
Q ss_pred cCCCCCCccEEEEE-eCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 88 TPPDPPTNLSVNVR-SGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 88 t~~~~p~~l~~~~~-~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
+.|.+|.+|.+... ...++.|+|.+.. ...+|.|+.....+ .....+......+ +|...+|.+|+.|.++|.|.+
T Consensus 3 ~~P~aP~~l~a~~~~~~~~v~LsW~~~~--~~~~Y~VyR~~~~~-~~~~~i~~~~~~t-sy~d~~l~~g~~Y~Y~V~Avn 78 (103)
T 3mpc_A 3 SAPAFPTGLSAVLDSSGNTANLTWNAAP--GANSYNVKRSTKSG-GPYTTIATNITST-NYTDTGVATGTKYYYVVSAVS 78 (103)
T ss_dssp CCCCCCEEEEEEECTTSCCEEEEEECCT--TCSEEEEEEESSTT-CCCEEEEEEECSS-EEEETTCCTTCCCEEEEEEEE
T ss_pred cCCCCCceeEEEEeCCCCEEEEEEECCC--CCCEEEEEEecCCC-CCcEEEeecCCCC-EEEECCCCCCCEEEEEEEEEe
Confidence 56888999998875 3679999999953 46899995443322 2233222222445 899999999999999999999
Q ss_pred CCCCcccceeeeeccC
Q psy4956 167 DSKESVAYTSRNFTTK 182 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~ 182 (361)
.++.|.++.....++.
T Consensus 79 ~~geS~~S~~vs~~~~ 94 (103)
T 3mpc_A 79 NGVETLNSAEAILQYP 94 (103)
T ss_dssp TTEECCCCCCEECBCC
T ss_pred CcCCcCCCccEEEECC
Confidence 8888876555554443
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=98.83 E-value=2e-08 Score=91.69 Aligned_cols=85 Identities=16% Similarity=0.287 Sum_probs=71.7
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.||....+...+.++++|+|.+|..+ ..+.+|.|+++..++..+....... .+.+++.+|.+|+.|.|+|.
T Consensus 9 ~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~~-----~t~~~V~~L~~g~~Y~FRV~ 83 (573)
T 3uto_A 9 EPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKSR-----YTYTTIEGLRAGKQYEFRII 83 (573)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEES-----SSEEEECCCCTTCEEEEEEE
T ss_pred CCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEecccc-----CCEEEeCCCCCCCcEeEEEE
Confidence 5788999999999999999999988544 4789999999998887776654322 37899999999999999999
Q ss_pred EEeCCCCCCceE
Q psy4956 260 TVSEDEISTPTT 271 (361)
Q Consensus 260 a~~~~~~s~~~~ 271 (361)
|.|..|.|.|+.
T Consensus 84 A~N~~G~s~PS~ 95 (573)
T 3uto_A 84 AENKHGQSKPCE 95 (573)
T ss_dssp EEETTEECCCCC
T ss_pred EEcCceEcCCcC
Confidence 999988776543
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.7e-07 Score=73.29 Aligned_cols=174 Identities=10% Similarity=0.001 Sum_probs=99.0
Q ss_pred EeCCCceEEEEecCCCCCCCcceEEEEEEcCCCC-CCCCeEEee-----c--CccceEEe--cCCCCCceEEEEEEEecC
Q psy4956 5 VHGVHGANLVIKIPENLSSDNSTYRLDYIPAHGH-PPPNTTYVS-----R--DIKDNIEF--SEGLPGTKYDFYLYYTNS 74 (361)
Q Consensus 5 ~~~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~-~~~~~~~~~-----~--~~~~~~~i--~~L~p~t~Y~i~V~a~~~ 74 (361)
+-......|...|-.... .-..+.+.|....+. ......... + .....+.| .+|..+..|.|.|.+..|
T Consensus 6 C~~~~~~~ltC~W~~~~~-~~~~~~~~~~l~~~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~v~v~~~~g 84 (219)
T 3tgx_A 6 CYTDYLQTVICILEMWNL-HPSTLTLTWQDQYEELKDEATSCSLHRSAHNATHATYTCHMDVFHFMADDIFSVQITDQSG 84 (219)
T ss_dssp EEECSSSEEEEEEECSSS-SCCEEEEEECCTTSCCTTSCCEEEEEEEEECSSEEEEEEECCGGGSCTTCEEEEEEECTTS
T ss_pred EEeCCCeEEEEEEECCCC-cCceEEEEEEccccCCCCcccCCCCccccCCCCCcEEEEEEECccccccceEEEEEEeCCC
Confidence 334445577777755432 333455555321110 111333321 1 11233444 467788999998866444
Q ss_pred CcCccceeeEE--EecCCCCCCccEEEEEeCCEEEEEeeCCCCC-------CcccEEEEEEECCCCCCCe--E-EeecCC
Q psy4956 75 TVHDWLTWTAS--ITTPPDPPTNLSVNVRSGKTAQIFWSPPISG-------KYSGFKLKVISLSEKTPPR--I-IGFTEN 142 (361)
Q Consensus 75 ~~~~~~~~~~~--~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~~-------~~~~y~v~~~~~~~~~~~~--~-~~~~~~ 142 (361)
. ..+...... -...|+||.++.+. ....+.|+|++|... ....|+|.|+..+. .|.. . ..+...
T Consensus 85 ~-~~s~~~~f~~~~iVkp~PP~nltv~--~~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~~~ 160 (219)
T 3tgx_A 85 Q-YSQECGSFLLAESIKPAPPFDVTVT--FSGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLISVD 160 (219)
T ss_dssp S-CEEEEEEEEGGGCBCCCCCEEEEEE--ESSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEECSS
T ss_pred C-EEecCceEeeeeeEEeCCCCceEEE--eCCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEecC
Confidence 3 222222121 12469999998887 356899999997532 23579999998763 4432 1 122222
Q ss_pred CC-ceEEEcCCCCCcEEEEEEEEEeCC------CCcccceeeeeccCC
Q psy4956 143 PP-AGYSLKDLTPGGSYQVQLFSVYDS------KESVAYTSRNFTTKP 183 (361)
Q Consensus 143 ~~-~~~~l~~L~p~~~Y~v~v~a~~~~------~~s~~~~~~~~~t~p 183 (361)
.. ..+.+.+|.|++.|.|+|+|.... ..|..+....+.|.+
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~ 208 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQS 208 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCc
Confidence 22 255667999999999999999863 234445556666653
|
| >3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.1e-06 Score=68.79 Aligned_cols=179 Identities=12% Similarity=0.145 Sum_probs=109.5
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCC--CCCcEEEEEEEEEeC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDL--TPGGSYQVQLFSVYD 167 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~p~~~Y~v~v~a~~~ 167 (361)
+.+.|+++.+. +-...|+|+++.. .....|.++|...+...|.....+.......+.|+++ .....|.+||+|..+
T Consensus 6 ~~~qNv~~~S~-Nf~~iL~W~p~~~~~~~~~YtVqy~~~~~~~W~~v~~C~~it~t~CDlT~~~~d~~~~Y~~RVrA~~g 84 (211)
T 3dlq_R 6 DLLQHVKFQSS-NFENILTWDSGPEGTPDTVYSIEYKTYGERDWVAKKGCQRITRKSCNLTVETGNLTELYYARVTAVSA 84 (211)
T ss_dssp GTEEEEEEEEE-TTEEEEEEEECTTCCSSEEEEEEEEETTCCCCEECTTCSSBSSSEEECTGGGCCTTCCEEEEEEEEET
T ss_pred cCccccEEEEE-CCeeEEEECCCCCCCCCeEEEEEEEECCCCCceeccccCCCCCCEEeCCcccccCCccEEEEEEEEeC
Confidence 34567777653 4577899999753 3456899999986543443321221112138888764 457889999999998
Q ss_pred CCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCCC--------------CcceEEEEEEeCCCCCCcee
Q psy4956 168 SKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYPA--------------SIYTHYKVSIDPPDAPESVL 229 (361)
Q Consensus 168 ~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--------------~~~~~y~v~~~~~~~~~~~~ 229 (361)
+..|.......|. +...|| .+.+... ..+|.|.-.+|... ..--.|.|.|+..+... .
T Consensus 85 ~~~S~w~~s~~F~p~~~t~igPP-~v~l~~~-~~~l~V~i~~P~~~~~~~~g~~~sl~di~~~l~Y~V~~~~~~s~~-k- 160 (211)
T 3dlq_R 85 GGRSATKMTDRFSSLQHTTLKPP-DVTCISK-VRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTYQ-M- 160 (211)
T ss_dssp TSCEEEEECCCBCHHHHCBCCCC-CEEEEEC-SSEEEEEECCCBCSCCC----CCBHHHHCTTCEEEEEEEC----C-E-
T ss_pred CCcCCceeeeeEEehhcceeCCC-EEEEEEc-CCEEEEEEECCCCccccCCCceeEHHHhcCCcEEEEEEEECCCcE-E-
Confidence 8777543333332 334455 4777644 44888888655321 01238999998876432 2
Q ss_pred EEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC--CCCCCceEEEEecCCC
Q psy4956 230 YVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE--DEISTPTTAQYRTIPL 279 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~--~~~s~~~~~~~~t~~~ 279 (361)
.... ....+.|.+|.|++.|.|+|++... ...+.+......|.|+
T Consensus 161 ~~~~-----~~~~~~l~~L~p~t~YCv~v~~~~~~~~k~S~~s~C~~~t~~~ 207 (211)
T 3dlq_R 161 HLGG-----KQREYEFFGLTPDTEFLGTIMILVPTWAKESAPYMCRVKTLPD 207 (211)
T ss_dssp EEEE-----SSSEEEEESCCTTCEEEEEEEEEEGGGTEECCCEEEEEECCCC
T ss_pred EEec-----CCCEEEEccCCCCCcEEEEEEEEEcCCCCCCCCcEeEEEeCCC
Confidence 2221 1268899999999999999999864 2234444322455543
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-07 Score=74.89 Aligned_cols=153 Identities=12% Similarity=0.066 Sum_probs=89.4
Q ss_pred CCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceEEE--
Q psy4956 196 ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTTAQ-- 273 (361)
Q Consensus 196 ~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~-- 273 (361)
..+++..|.++.. ....+.+.+............... .........+|.-.+.+.|.|.+ +...+.+..+.
T Consensus 36 ~~~~tc~~~~~~~--~~~~~~~~~~~~~~~~~c~~~~~~---~~~y~~~~~~~~l~~~~~i~V~l--G~~~S~~~~f~l~ 108 (223)
T 3up1_A 36 QHSLTCAFEDPDV--NTTNLEFEICGALVEVKCLNFRKL---QEIYFIETKKFLLIGKSNICVKV--GEKSLTCKKIDLT 108 (223)
T ss_dssp EEEEEEEESSTTC--CCTTEEEEEESSBBSCSEEECEEE---TTEEEEEESCBCCSSEEEEEEEE--TTEEEEEEEEEGG
T ss_pred eEEEEEecCCCCC--CCCceEEEEecccccccccccccc---cceEEeecCCEEEEeccEEEEEc--CCceeccEEEEec
Confidence 3578889987633 334555555543222211111111 11244556778878888888884 21112222221
Q ss_pred EecCCCCCccceEEeeecC-CceEEEEeeCCCCC---CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCce
Q psy4956 274 YRTIPLRPLSFTYDKASIT-SNSLRVVWEPPKGF---SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRT 349 (361)
Q Consensus 274 ~~t~~~~p~~l~~~~~~~~-~~si~l~W~~~~~~---~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~ 349 (361)
-...|.||.+|.+ .... ...+.|+|.+|... .....|+|+|+..+... .............+.+.+ |.||+.
T Consensus 109 ~iVKPdPP~nLtv--~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~-~W~~v~~~~t~~~i~l~~-L~Pgt~ 184 (223)
T 3up1_A 109 TIVKPEAPFDLSV--VYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDEN-KWTHVNLSSTKLTLLQRK-LQPAAM 184 (223)
T ss_dssp GSBCCCCCEEEEE--EEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSS-CCEEEEESSSEEEEEGGG-SCTTCE
T ss_pred ceEEcCCCcceEE--EEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCC-ceEEEEecCceeEEeccc-cCCCcE
Confidence 1346889999999 4443 46799999997421 12578999999874211 122223333323455566 999999
Q ss_pred EEEEEEEEeC
Q psy4956 350 YQVLVKTVSG 359 (361)
Q Consensus 350 Y~v~V~a~~~ 359 (361)
|.|+|||...
T Consensus 185 Y~vqVR~r~~ 194 (223)
T 3up1_A 185 YEIKVRSIPD 194 (223)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEeeC
Confidence 9999999874
|
| >3og6_B Interleukin 28 receptor, alpha (interferon, lambd receptor); helical bundle, fibronectin type III domain, beta-sandwich, signaling, membrane; HET: BMA NAG; 2.10A {Homo sapiens} PDB: 3og4_B* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.4e-06 Score=68.61 Aligned_cols=167 Identities=14% Similarity=0.150 Sum_probs=103.5
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC-CCcccEEEEEEE-CCCCCCCeEEeecCCCCceEEEcCC---CCCcEEEEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS-GKYSGFKLKVIS-LSEKTPPRIIGFTENPPAGYSLKDL---TPGGSYQVQLFS 164 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~-~~~~~y~v~~~~-~~~~~~~~~~~~~~~~~~~~~l~~L---~p~~~Y~v~v~a 164 (361)
..+|.|+++... +-...|.|+++.. ..-..|.++|.. .....|.....+.......+.|+.+ .....|.+||+|
T Consensus 6 Lp~P~NV~~~S~-Nf~~iL~W~p~~~~~~~v~YtVqy~~~y~~~~W~~v~~C~~it~t~CDlT~~~~~d~~~~Y~~RVrA 84 (226)
T 3og6_B 6 LAPPQNVTLLSQ-NFSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRT 84 (226)
T ss_dssp CCCCEEEEEEEE-TTEEEEEEECCSSCCSSCEEEEEEECCTTSCCEEECGGGTTBCSSEEECSSCTTCCTTSCBCEEEEE
T ss_pred CCCCceeEEEEE-CCceEEEECCCCCCCCCeEEEEEEEecCCCCCceeCccccCCCCCEEeCCcccccCCccCEEEEEEE
Confidence 456889988764 5578899999642 234579999983 3222333222222222238999874 567889999999
Q ss_pred EeCCCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCCC---CcceEEEEEEeCCCCCCceeEEeeccCC
Q psy4956 165 VYDSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYPA---SIYTHYKVSIDPPDAPESVLYVEKEGEP 237 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~~---~~~~~y~v~~~~~~~~~~~~~~~~~~~~ 237 (361)
..++..|.......|. +...||. +.+...+ .+|.|.-..|... +.--.|.|.|+..++.......... .
T Consensus 85 ~~g~~~S~W~~s~~F~p~~~t~igPP~-v~v~~~~-~sl~V~it~P~~~~~~~~~l~Y~v~yWk~~s~~k~~~~~~~--~ 160 (226)
T 3og6_B 85 VSPSSKSPWVESEYLDYLFEVEPAPPV-LVLTQTE-EILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTP--H 160 (226)
T ss_dssp EETTEECCCEECCCBCHHHHCCCCCCE-EEEEEET-TEEEEEEECCCCTTCCCCCEEEEEEEEETTCSCCEECCCEE--T
T ss_pred EcCCCccCCeecccccchhhCEeCCCE-EEEEEcC-CEEEEEEECCCcccccCCCcEEEEEEEECCCCCeEEeeecc--C
Confidence 9988777654333342 4455665 7776544 5777777655322 3345799988877665432211111 0
Q ss_pred CCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 238 PGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 238 ~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
.....+.|.. .|++.|.|+|+++.
T Consensus 161 ~~~~~~~L~~-~~~~~YCv~vqa~~ 184 (226)
T 3og6_B 161 GQPVQITLQP-AASEHHCLSARTIY 184 (226)
T ss_dssp TSEEEEECCT-TCCSEEEEEEEEEE
T ss_pred CceeEEEecC-CCCCcEEEEEEEEE
Confidence 0112456665 89999999999863
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.8e-07 Score=73.13 Aligned_cols=132 Identities=11% Similarity=0.050 Sum_probs=90.0
Q ss_pred eEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccCCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCC
Q psy4956 146 GYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPD 223 (361)
Q Consensus 146 ~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~ 223 (361)
.+.|.++.......+...|.+..|.............|.+|..+.+. ....++.|.|.++... ..+..|.|.|...+
T Consensus 77 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~ 155 (215)
T 3mtr_A 77 YLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVG 155 (215)
T ss_dssp EEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETT
T ss_pred EEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECC
Confidence 67778887776667777788877665433344444567788777774 5667899999865422 46789999999876
Q ss_pred CCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE-EEEecCC
Q psy4956 224 APESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~-~~~~t~~ 278 (361)
...+...............+.|.+|.+++.|.|+|.|.|..|.+.++. ..+.|.|
T Consensus 156 ~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 156 EEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp CCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred CCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 654433211110001126789999999999999999999998876543 3455543
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.9e-07 Score=57.61 Aligned_cols=75 Identities=16% Similarity=0.057 Sum_probs=55.3
Q ss_pred EecCCCCCCCcceEEEEEEcCCCC-CCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecCCCC
Q psy4956 15 IKIPENLSSDNSTYRLDYIPAHGH-PPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTPPDP 92 (361)
Q Consensus 15 ~~~p~~~~~~~~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~~~~ 92 (361)
|+|.+...+.++.|.|+|++.... .+.+..+++- .++|+|.+|+||..|..++++.... ..+.+..+.++|.-..
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev~IPgh--~nSYtIsGLkPGvtYegQLisV~r~-g~~EvtrfdfTT~~~~ 77 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEATIPGH--LNSYTIKGLKPGVVYEGQLISIQQY-GHQEVTRFDFTTTSTS 77 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEEEECSS--SSCCCCCCCCTTCCEEEEEEEECTT-SCCCEEEEEECSSSSC
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEEEcCCc--cceEEEeccCCCcEEEEEEEeeeec-ccCCceEEEEEeccCC
Confidence 455555677899999999986543 2334555554 8999999999999999999998876 4445556777665443
|
| >1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex, fibronectin type-III, immune system; 2.04A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I | Back alignment and structure |
|---|
Probab=98.69 E-value=3.3e-06 Score=67.14 Aligned_cols=168 Identities=15% Similarity=0.118 Sum_probs=103.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCC--CCCCeEEeecCCCCceEEEcCCC--CCcEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSE--KTPPRIIGFTENPPAGYSLKDLT--PGGSYQVQLFS 164 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~--~~~~~~~~~~~~~~~~~~l~~L~--p~~~Y~v~v~a 164 (361)
...+|.++++... +-...|+|+++.......|.|+|...+. ..|.. .-...... .+.|+++. ....|.+||+|
T Consensus 11 ~lp~P~NV~~~S~-Nf~~iL~W~p~~~~~~~~YtVqy~~y~~~~~~W~~-~C~~it~~-~CDlT~~~~d~~~~y~~RVrA 87 (229)
T 1fyh_B 11 SVPTPTNVTIESY-NMNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWID-ACINISHH-YCNISDHVGDPSNSLWVRVKA 87 (229)
T ss_dssp -CCCCEEEEEECB-SSCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEE-EEEEESSS-EEECGGGCCSTTSCEEEEEEE
T ss_pred CCCCCcEEEEEEE-CCeeEEEECCCCCCCCeEEEEEEEeccCccchhHh-hCcCCCCC-EEeCCCccccCceeEEEEEEE
Confidence 3566889888764 4467789998764345689999987653 23432 21122344 88888754 66789999999
Q ss_pred EeCCCCcccceeeee----ccCCCCCcceEEEeccCCeEEEEeecCCCC--C---cc----------eEEEEEEeCCCCC
Q psy4956 165 VYDSKESVAYTSRNF----TTKPNTPGKFIVWFRNETTLLVLWQPSYPA--S---IY----------THYKVSIDPPDAP 225 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~----~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~---~~----------~~y~v~~~~~~~~ 225 (361)
..++..|.......| .+...||. +.+... ..+|.|.-.+|... | .+ -.|.|.++..+..
T Consensus 88 ~~g~~~S~w~~s~~F~p~~~t~igPP~-v~l~~~-~~~i~V~i~~P~~~~~g~~~~l~~~~~~~~~~~~Y~v~~~~~~s~ 165 (229)
T 1fyh_B 88 RVGQKESAYAKSEEFAVCRDGKIGPPK-LDIRKE-EKQIMIDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMNGSE 165 (229)
T ss_dssp EETTEECCCEECCCBCHHHHSBCCCCE-EEEEEC-SSEEEEEEECCGGGC-----------CCSCSEEEEEEEEEETTEE
T ss_pred EcCCcccCCEeccceeeeeeeEECCCe-EEEEEe-CCEEEEEEeCCCcccCCCcceeeecCcccccceEEEEEEEECCCC
Confidence 998877754333333 23455665 777644 44777777655321 0 11 1789988775542
Q ss_pred CceeEEeec---cCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 226 ESVLYVEKE---GEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 226 ~~~~~~~~~---~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
. ....... ........+.|.+|.|++.|.|+|++..
T Consensus 166 ~-~~~~~~~~~~~~~~~~~~~~i~~L~p~t~YCv~v~~~~ 204 (229)
T 1fyh_B 166 I-QYKILTQKEDDCDEIQCQLAIPVSSLNSQYCVSAEGVL 204 (229)
T ss_dssp E-EEEEESSSCTTBCSSEEEEEEECCTTCCEEEEEEEEEE
T ss_pred e-eEEEEeecccCccccceeEEEeeCCCCCeEEEEEEEEe
Confidence 1 1111110 0011123478899999999999999975
|
| >3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1e-06 Score=73.82 Aligned_cols=163 Identities=12% Similarity=0.148 Sum_probs=88.4
Q ss_pred CcceEEEeccCC-eEEEEeecCCCCCcceEEEEEEeCCCCCCcee----EEeec--cCCCCC--cE--EEecCCCCC---
Q psy4956 186 PGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESVL----YVEKE--GEPPGP--AQ--AAFKGLVPG--- 251 (361)
Q Consensus 186 p~~l~~~~~~~~-~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~----~~~~~--~~~~~~--~~--~~~~~L~p~--- 251 (361)
+.+|........ ++++.|.+.........|....... +..... ..... ..++.. .. +.+..+-|.
T Consensus 104 ~~~lsC~~~~~~~~~~C~W~pg~~~~l~~~~~~~r~~~-~~~~~~C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp~~~~ 182 (306)
T 3d85_D 104 KTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSS-DPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEE 182 (306)
T ss_dssp CCCCEEEBSSSSSEEEEEEEESCCSSEEEEEEEEECSS-SCEEEEECCCEEEEEEEC--CEEEEEEEEEEETTCCTTSCC
T ss_pred CCcceEEcCCcccCcEEEecCCCCCceeEEEEEEecCC-CCcceECCCCCCCccceeecCccccceeeeeeccccccccc
Confidence 446777665554 8999999874322223444332211 111000 00000 000000 11 123444454
Q ss_pred -CeEEEEEEEEeCCCCCCceEEEE----ecCCCCCccceEEeeecCC-ceEEEEeeCCCCC-C----CceeEEEEEEECC
Q psy4956 252 -RAYNISVQTVSEDEISTPTTAQY----RTIPLRPLSFTYDKASITS-NSLRVVWEPPKGF-S----EFDKYQVSINVRR 320 (361)
Q Consensus 252 -t~Y~v~V~a~~~~~~s~~~~~~~----~t~~~~p~~l~~~~~~~~~-~si~l~W~~~~~~-~----~~~~y~i~~~~~~ 320 (361)
..|.|+|.|.|..|.+.+. ..+ ...|+||.+|.+ ..... ..+.|+|++|... . -...|+|+|+..+
T Consensus 183 ~~~y~~~V~A~n~lg~~s~~-~~f~~~~iVkPdPP~~l~~--~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~ 259 (306)
T 3d85_D 183 SLPIEVMVDAVHKLKYEQYT-SSFFIRDIIKPDPPKNLQL--KPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKS 259 (306)
T ss_dssp CSCEEEEEEEEETTEEEEEE-EEECHHHHBCCCCCEEEEE--EEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC-
T ss_pred cEEEEEEEEEEccCCccccc-eEEEehhcEecCCCceEEE--EEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECC
Confidence 4899999999987744333 222 357999999999 55443 7899999997531 1 2258999999776
Q ss_pred CCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 321 PGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
...... . .....+++.+ .+++.|.|+|+|...
T Consensus 260 ~~~~~~-~--~~~~~ts~~l----~~~~~Y~vqVRa~~~ 291 (306)
T 3d85_D 260 KREKKD-R--VFTDKTSATV----ICRKNASISVRAQDR 291 (306)
T ss_dssp -----C-E--EEESSSEEEE----CCCSSCEEEEEEEES
T ss_pred CCccEE-E--eeccccEEEE----eCCCeEEEEEEeccC
Confidence 422221 1 1223345544 569999999999873
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1.5e-07 Score=84.02 Aligned_cols=78 Identities=18% Similarity=0.310 Sum_probs=66.6
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
...|.++++...+.+++.|+|.+|.++.+..|+|.|...+.........+....+ ++.|.+|+|++.|.|+|+|.+..
T Consensus 370 l~~~~~l~~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~v~a~~~~ 447 (461)
T 3csg_A 370 SSVPTNLEVVAATPTSLLISWDASYSSSVSYYRITYGETGGNSPVQEFTVPGSKS-TATISGLSPGVDYTITVYAYSYY 447 (461)
T ss_dssp CCSSCCCEEEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEECTT
T ss_pred cCCCcceEEeccCCCeEEEEecCCCCCcceEEEEEEEECCCCccceEEEecCCCc-eEEecCCCCCCEEEEEEEEEecc
Confidence 3458899999999999999999986668999999999875422246677777777 99999999999999999999987
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=2.2e-07 Score=82.91 Aligned_cols=87 Identities=28% Similarity=0.418 Sum_probs=67.5
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCC--ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
..|.+|++...+.++++|+|.+| +.+.+..|.|.|.+.+... ....+.. ..+++.|.+|+|+|.|.|+|+|.
T Consensus 371 ~~~~~l~~~~~~~~s~~l~W~~p-~~~~~~~y~v~y~~~~~~~~~~~~~~~~-----~~~~~~i~~L~p~t~Y~~~v~a~ 444 (461)
T 3csg_A 371 SVPTNLEVVAATPTSLLISWDAS-YSSSVSYYRITYGETGGNSPVQEFTVPG-----SKSTATISGLSPGVDYTITVYAY 444 (461)
T ss_dssp CSSCCCEEEEECSSCEEEECCCT-TGGGCSEEEEEEEETTCCSCCEEEEEET-----TCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCcceEEeccCCCeEEEEecCC-CCCcceEEEEEEEECCCCccceEEEecC-----CCceEEecCCCCCCEEEEEEEEE
Confidence 46889999999999999999987 4568999999998876433 3333332 24899999999999999999999
Q ss_pred eCC--CCCCceEEEEec
Q psy4956 262 SED--EISTPTTAQYRT 276 (361)
Q Consensus 262 ~~~--~~s~~~~~~~~t 276 (361)
+.. ..|.+....++|
T Consensus 445 ~~~~g~~s~~~~~~~~~ 461 (461)
T 3csg_A 445 SYYYYYYSSPISINYRT 461 (461)
T ss_dssp CTTSCBCSCCEEEEEEC
T ss_pred eccCCCCCCCEEEeccC
Confidence 976 234555665554
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.60 E-value=8.9e-07 Score=60.76 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=61.2
Q ss_pred cCCCCCcceEEEec-cCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 181 TKPNTPGKFIVWFR-NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 181 t~p~~p~~l~~~~~-~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
+.|.+|.+|.+... ....+.|+|.+.. ...+|.|......+......... ...+++...+|.+|+.|.++|.
T Consensus 3 ~~P~aP~~l~a~~~~~~~~v~LsW~~~~---~~~~Y~VyR~~~~~~~~~~i~~~----~~~tsy~d~~l~~g~~Y~Y~V~ 75 (103)
T 3mpc_A 3 SAPAFPTGLSAVLDSSGNTANLTWNAAP---GANSYNVKRSTKSGGPYTTIATN----ITSTNYTDTGVATGTKYYYVVS 75 (103)
T ss_dssp CCCCCCEEEEEEECTTSCCEEEEEECCT---TCSEEEEEEESSTTCCCEEEEEE----ECSSEEEETTCCTTCCCEEEEE
T ss_pred cCCCCCceeEEEEeCCCCEEEEEEECCC---CCCEEEEEEecCCCCCcEEEeec----CCCCEEEECCCCCCCEEEEEEE
Confidence 45788999999875 4679999999752 35899997665433333322221 1237899999999999999999
Q ss_pred EEeCCCCCCceE
Q psy4956 260 TVSEDEISTPTT 271 (361)
Q Consensus 260 a~~~~~~s~~~~ 271 (361)
|++..++|.++.
T Consensus 76 Avn~~geS~~S~ 87 (103)
T 3mpc_A 76 AVSNGVETLNSA 87 (103)
T ss_dssp EEETTEECCCCC
T ss_pred EEeCcCCcCCCc
Confidence 999777776554
|
| >1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor complex, immune system; 2.52A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R | Back alignment and structure |
|---|
Probab=98.53 E-value=5.9e-05 Score=59.23 Aligned_cols=165 Identities=12% Similarity=0.117 Sum_probs=101.7
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcC--CCCCc--EEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD--LTPGG--SYQVQLF 163 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~--L~p~~--~Y~v~v~ 163 (361)
...+|.++++.+. +-...|+|+++. .+....|.++|...+...|.....+.. .+ .+.|++ +.... .|.+||+
T Consensus 4 ~Lp~P~NV~~~S~-Nf~~iL~W~p~~~~~~~~~YtVqy~~~~~~~W~~~~~C~~-it-~CDlT~~~~d~~~~~~y~~RVr 80 (214)
T 1y6k_R 4 ELPSPPSVWFEAE-FFHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQ-TL-SYDLTAVTLDLYHSNGYRARVR 80 (214)
T ss_dssp CCCCCSCEEEEEE-TTEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEES-SS-EEECGGGGTTGGGSSCEEEEEE
T ss_pred CCCCCceeEEEEE-cCcEEEEECCCCCCCCCeEEEEEEEEcCCCCCeeCCCCCc-cc-eEECCCcccccccCccEEEEEE
Confidence 3567899998764 557889999965 334567999999865544544333332 23 788876 44533 8999999
Q ss_pred EEeCCCCccccee-eee---ccCCCCCcceEEEeccCCeEEEEeecCCCC-C---c-----c---eEEEEEEeCCCCCCc
Q psy4956 164 SVYDSKESVAYTS-RNF---TTKPNTPGKFIVWFRNETTLLVLWQPSYPA-S---I-----Y---THYKVSIDPPDAPES 227 (361)
Q Consensus 164 a~~~~~~s~~~~~-~~~---~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~---~-----~---~~y~v~~~~~~~~~~ 227 (361)
|..++..|..... ..| .+...||. +.+... ..+|.|.-.+|... . . + ..|.+.++...+...
T Consensus 81 A~~~~~~S~w~~s~~~F~p~~t~igPP~-v~l~~~-~~~l~V~i~~P~~~~~~~~~~y~~~f~~~~~y~~~~~k~~~~~~ 158 (214)
T 1y6k_R 81 AVDGSRHSQWTVTNTRFSVDEVTLTVGS-VNLEIH-NGFILGKIQLPRPKMAPAQDTYESIFSHFREYEIAIRKVPGQFT 158 (214)
T ss_dssp EEETTEECCCEECSSCBCGGGEEBCCSE-EEEEEC-SSEEEEEEECCCCSSSCTTCCHHHHSCSCEEEEEEEEEESSCSC
T ss_pred EecCCcccCCEecCCceeecccEECCCe-EEEEEe-CCEEEEEEECCCcccccchhhhhheeccccEEEEEEEcccccCc
Confidence 9998877754322 233 23345564 777644 44899988776422 0 0 1 137887775443221
Q ss_pred eeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 228 VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
....... ...+.+..+.+++.|.|+|++...
T Consensus 159 ~~~~~~~-----~~~l~~~~p~~~t~YCv~v~~~~~ 189 (214)
T 1y6k_R 159 FTHKKVK-----HEQFSLLTSGEVGEFCVQVKPSVA 189 (214)
T ss_dssp CEEEEES-----SSEEEEECCSCCSEEEEEEEEEET
T ss_pred ccceeee-----eeeeeccCCCCCCeEEEEEEEEec
Confidence 1111111 133455566669999999998753
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.2e-06 Score=56.06 Aligned_cols=81 Identities=16% Similarity=0.052 Sum_probs=57.3
Q ss_pred eCCCceEEEEecCCCCCCCcceEEEEEEcCCCCCCCCeEEeecCccceEEecCCCCCceEEEEEEEecCCcCccceeeEE
Q psy4956 6 HGVHGANLVIKIPENLSSDNSTYRLDYIPAHGHPPPNTTYVSRDIKDNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTAS 85 (361)
Q Consensus 6 ~~~~~~~l~~~~p~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~ 85 (361)
.....+.-.|+|-....+++..|.|.||+.... ....++...+...+|+|.+|+||..|+..|.+.+.-|.. ......
T Consensus 16 ~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~-g~Wke~~Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~-Evs~f~ 93 (98)
T 1oww_A 16 TPSQPNSHPIQWNAPQPSHISKYILRWRPKNSV-GRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQ-EVTRFD 93 (98)
T ss_dssp CSSCTTCEEEEEECCSSSCEEEEEEEEEETTCS-SCCEEEEECSSCCEEEECSCCSSEEEEEEEEEEESSSCE-EEEEEE
T ss_pred CCCCCCccceEEecCCCCCceEEEEEEEEcCCC-CceeEEEecCccceEEEecCCCCcEEEEEEEEeeccCcc-cceEEE
Confidence 344455566777777788899999999986542 224444444448999999999999999999999876343 333444
Q ss_pred Eec
Q psy4956 86 ITT 88 (361)
Q Consensus 86 ~~t 88 (361)
++|
T Consensus 94 FtT 96 (98)
T 1oww_A 94 FTT 96 (98)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
|
| >2hft_A Human tissue factor; coagulation factor; 1.69A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1jps_T 1ahw_C 1boy_A 1tfh_A 1wtg_T* 1wss_T* 1wqv_T* 1wun_T* 1wv7_T* 2zp0_T* 2zwl_T* 2zzu_T* 1z6j_T* 2aei_T* 2flb_T* 2b7d_T* 2f9b_T* 1o5d_T* 2flr_T* 1w0y_T* ... | Back alignment and structure |
|---|
Probab=98.51 E-value=1.8e-05 Score=62.26 Aligned_cols=161 Identities=16% Similarity=0.124 Sum_probs=101.4
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcC-C--CCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD-L--TPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-L--~p~~~Y~v~v~a~ 165 (361)
...+|.++++.+. +-...|.|+++.. ...|.|+|...+. .|.. .-...... .+.|++ + .....|.+||+|.
T Consensus 5 ~lp~P~NV~~~S~-Nf~~iL~W~p~~~--n~~YtVqy~~~~~-~W~~-~C~~it~t-~CDlT~~~~~d~~~~y~~RVrA~ 78 (218)
T 2hft_A 5 NTVAAYNLTWKST-NFKTILEWEPKPV--NQVYTVQISTKSG-DWKS-KCFYTTDT-ECDLTDEIVKDVKQTYLARVFSY 78 (218)
T ss_dssp SCCCCEEEEEEEE-TTEEEEEEECCCS--SEEEEEEEEETTS-CCEE-EEEEESCS-EEECHHHHGGGTTSCEEEEEEEE
T ss_pred cCCCCceeEEEEE-cCeEEEEEcCCCC--CeEEEEEEEEcCc-chHh-hCcCCCCC-EEcCCcccccCCCceEEEEEEEE
Confidence 3467889988764 5578899999653 4789999998753 3443 22223334 888876 3 6778899999999
Q ss_pred eCC---CCcc-----cceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCCC--------------CcceEEEEEE
Q psy4956 166 YDS---KESV-----AYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYPA--------------SIYTHYKVSI 219 (361)
Q Consensus 166 ~~~---~~s~-----~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--------------~~~~~y~v~~ 219 (361)
.++ ..|. ......|. +...||. +.+.....+.|.|.-.+|... +..-.|.|.+
T Consensus 79 ~~~~~~~~S~~~~s~w~~s~~F~p~~~t~igPP~-v~l~~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~l~Y~v~~ 157 (218)
T 2hft_A 79 PAGNVESTGSAGEPLYENSPEFTPYLETNLGQPT-IQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYY 157 (218)
T ss_dssp ECSSCCCC----CCCEEECCCBCHHHHSBCCCCC-EEEEEEETTEEEEEECCCEEEEEETTEEEEHHHHHGGGCEEEEEE
T ss_pred eCCCCCccccccccCcccccceeehHhCEECCCE-EEEEECCCCEEEEEEECCCCccccCCcccchhHhcCCCeEEEEEE
Confidence 975 3221 11122222 3455665 888766666888888765311 1145799999
Q ss_pred eCCCCCC-------ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 220 DPPDAPE-------SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 220 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
+..++.. ...... . ...+. .+|.|++.|.|+|++...
T Consensus 158 w~~~s~~~~~~~~~~k~~~~-~-----~~~~~-~~L~p~t~YCv~v~~~~~ 201 (218)
T 2hft_A 158 WKSSSQEKGEFRSGKKTAKT-N-----TNEFL-IDVDKGENYCFSVQAVIP 201 (218)
T ss_dssp ECCC---------CCEEEEE-S-----SSEEE-EECCTTCCCEEEEEEECT
T ss_pred EECCCCcccccccceEEEec-C-----CceEE-ecCCCCCCEeEEEEEEEe
Confidence 8876541 222111 1 13444 459999999999999754
|
| >3og6_B Interleukin 28 receptor, alpha (interferon, lambd receptor); helical bundle, fibronectin type III domain, beta-sandwich, signaling, membrane; HET: BMA NAG; 2.10A {Homo sapiens} PDB: 3og4_B* | Back alignment and structure |
|---|
Probab=98.44 E-value=5e-05 Score=59.77 Aligned_cols=165 Identities=16% Similarity=0.122 Sum_probs=101.0
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeC-CCCCCceeEEeeccCCCCCcEEEecCC---CCCCeEEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP-PDAPESVLYVEKEGEPPGPAQAAFKGL---VPGRAYNISVQ 259 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L---~p~t~Y~v~V~ 259 (361)
.+|.|+.+...+ -...|.|+++.....-..|.|+|.. .+...+.. +.... .-..+.+.|+.+ .....|.++|+
T Consensus 7 p~P~NV~~~S~N-f~~iL~W~p~~~~~~~v~YtVqy~~~y~~~~W~~-v~~C~-~it~t~CDlT~~~~~d~~~~Y~~RVr 83 (226)
T 3og6_B 7 APPQNVTLLSQN-FSVYLTWLPGLGNPQDVTYFVAYQSSPTRRRWRE-VEECA-GTKELLCSMMCLKKQDLYNKFKGRVR 83 (226)
T ss_dssp CCCEEEEEEEET-TEEEEEEECCSSCCSSCEEEEEEECCTTSCCEEE-CGGGT-TBCSSEEECSSCTTCCTTSCBCEEEE
T ss_pred CCCceeEEEEEC-CceEEEECCCCCCCCCeEEEEEEEecCCCCCcee-Ccccc-CCCCCEEeCCcccccCCccCEEEEEE
Confidence 479999998554 5778899986433334579999983 33333322 11111 223478889874 56788999999
Q ss_pred EEeCCCCCCceEE-EE----ecCCCCCccceEEeeecCCceEEEEeeCCCCC---CCceeEEEEEEECCCCCCCCceeec
Q psy4956 260 TVSEDEISTPTTA-QY----RTIPLRPLSFTYDKASITSNSLRVVWEPPKGF---SEFDKYQVSINVRRPGASSTPITKS 331 (361)
Q Consensus 260 a~~~~~~s~~~~~-~~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~---~~~~~y~i~~~~~~~~~~~~~~~~~ 331 (361)
|..+...+..... .+ .+...||. +.+ ...++++.|.-..|... ..-..|.|.|.+.+...........
T Consensus 84 A~~g~~~S~W~~s~~F~p~~~t~igPP~-v~v---~~~~~sl~V~it~P~~~~~~~~~l~Y~v~yWk~~s~~k~~~~~~~ 159 (226)
T 3og6_B 84 TVSPSSKSPWVESEYLDYLFEVEPAPPV-LVL---TQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTP 159 (226)
T ss_dssp EEETTEECCCEECCCBCHHHHCCCCCCE-EEE---EEETTEEEEEEECCCCTTCCCCCEEEEEEEEETTCSCCEECCCEE
T ss_pred EEcCCCccCCeecccccchhhCEeCCCE-EEE---EEcCCEEEEEEECCCcccccCCCcEEEEEEEECCCCCeEEeeecc
Confidence 9998766654432 11 24555665 676 33446788888876321 1335688888877653221111111
Q ss_pred CCCCceeEeccCCCCCceEEEEEEEE
Q psy4956 332 RDEPTQCDMSEGLEPGRTYQVLVKTV 357 (361)
Q Consensus 332 ~~~~~~~~~~~~L~p~t~Y~v~V~a~ 357 (361)
......+.|. .+|++.|=|+|+|+
T Consensus 160 ~~~~~~~~L~--~~~~~~YCv~vqa~ 183 (226)
T 3og6_B 160 HGQPVQITLQ--PAASEHHCLSARTI 183 (226)
T ss_dssp TTSEEEEECC--TTCCSEEEEEEEEE
T ss_pred CCceeEEEec--CCCCCcEEEEEEEE
Confidence 1122245563 38999999999985
|
| >3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R* | Back alignment and structure |
|---|
Probab=98.42 E-value=2.3e-05 Score=61.24 Aligned_cols=162 Identities=12% Similarity=0.071 Sum_probs=101.1
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCC--CCCCeEEEEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL--VPGRAYNISVQTV 261 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~p~t~Y~v~V~a~ 261 (361)
..+.|+.+...+ -.-.|.|+++........|.|+|...+...+.. +.... .-..+.+.|+++ .....|.++|+|.
T Consensus 6 ~~~qNv~~~S~N-f~~iL~W~p~~~~~~~~~YtVqy~~~~~~~W~~-v~~C~-~it~t~CDlT~~~~d~~~~Y~~RVrA~ 82 (211)
T 3dlq_R 6 DLLQHVKFQSSN-FENILTWDSGPEGTPDTVYSIEYKTYGERDWVA-KKGCQ-RITRKSCNLTVETGNLTELYYARVTAV 82 (211)
T ss_dssp GTEEEEEEEEET-TEEEEEEEECTTCCSSEEEEEEEEETTCCCCEE-CTTCS-SBSSSEEECTGGGCCTTCCEEEEEEEE
T ss_pred cCccccEEEEEC-CeeEEEECCCCCCCCCeEEEEEEEECCCCCcee-ccccC-CCCCCEEeCCcccccCCccEEEEEEEE
Confidence 346778776544 467789998754445678999998765434332 11111 122467888774 4677899999999
Q ss_pred eCCCCCCceEE-EE----ecCCCCCccceEEeeecCCceEEEEeeCCCCC--------------CCceeEEEEEEECCCC
Q psy4956 262 SEDEISTPTTA-QY----RTIPLRPLSFTYDKASITSNSLRVVWEPPKGF--------------SEFDKYQVSINVRRPG 322 (361)
Q Consensus 262 ~~~~~s~~~~~-~~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~--------------~~~~~y~i~~~~~~~~ 322 (361)
.+...+..... .+ .+...||. +.+ ....++|.|.-.+|... -.--.|.|.|...+..
T Consensus 83 ~g~~~S~w~~s~~F~p~~~t~igPP~-v~l---~~~~~~l~V~i~~P~~~~~~~~g~~~sl~di~~~l~Y~V~~~~~~s~ 158 (211)
T 3dlq_R 83 SAGGRSATKMTDRFSSLQHTTLKPPD-VTC---ISKVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHDLFYHLELQVNRTY 158 (211)
T ss_dssp ETTSCEEEEECCCBCHHHHCBCCCCC-EEE---EECSSEEEEEECCCBCSCCC----CCBHHHHCTTCEEEEEEEC----
T ss_pred eCCCcCCceeeeeEEehhcceeCCCE-EEE---EEcCCEEEEEEECCCCccccCCCceeEHHHhcCCcEEEEEEEECCCc
Confidence 98766543321 11 23445564 677 45566899988776320 0123799998877532
Q ss_pred CCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 323 ASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
..... .....+.|.+ |.|++.|=|+|.+..
T Consensus 159 ---~k~~~--~~~~~~~l~~-L~p~t~YCv~v~~~~ 188 (211)
T 3dlq_R 159 ---QMHLG--GKQREYEFFG-LTPDTEFLGTIMILV 188 (211)
T ss_dssp ---CEEEE--ESSSEEEEES-CCTTCEEEEEEEEEE
T ss_pred ---EEEEe--cCCCEEEEcc-CCCCCcEEEEEEEEE
Confidence 12221 2336888986 999999999999864
|
| >1fyh_B Interferon-gamma receptor alpha chain; cytokine-receptor complex, fibronectin type-III, immune system; 2.04A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1fg9_C 1jrh_I | Back alignment and structure |
|---|
Probab=98.29 E-value=1.8e-05 Score=62.84 Aligned_cols=162 Identities=14% Similarity=0.094 Sum_probs=100.7
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCC--CCceeEEeeccCCCCCcEEEecCCC--CCCeEEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDA--PESVLYVEKEGEPPGPAQAAFKGLV--PGRAYNISVQ 259 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~--p~t~Y~v~V~ 259 (361)
.+|.|+++...+ -.-.|.|+++.... ...|.|+|...+. ..+....... ..+.+.|+++. ....|.++|+
T Consensus 13 p~P~NV~~~S~N-f~~iL~W~p~~~~~-~~~YtVqy~~y~~~~~~W~~~C~~i----t~~~CDlT~~~~d~~~~y~~RVr 86 (229)
T 1fyh_B 13 PTPTNVTIESYN-MNPIVYWEYQIMPQ-VPVFTVEVKNYGVKNSEWIDACINI----SHHYCNISDHVGDPSNSLWVRVK 86 (229)
T ss_dssp CCCEEEEEECBS-SCCEEEEECCCCSS-CCEEEEEEEETTCSSSCCEEEEEEE----SSSEEECGGGCCSTTSCEEEEEE
T ss_pred CCCcEEEEEEEC-CeeEEEECCCCCCC-CeEEEEEEEeccCccchhHhhCcCC----CCCEEeCCCccccCceeEEEEEE
Confidence 478999998655 45668999874323 4789999986542 2343222111 13688887744 5678999999
Q ss_pred EEeCCCCCCceEEE-----EecCCCCCccceEEeeecCCceEEEEeeCCCCC-----CCc----------eeEEEEEEEC
Q psy4956 260 TVSEDEISTPTTAQ-----YRTIPLRPLSFTYDKASITSNSLRVVWEPPKGF-----SEF----------DKYQVSINVR 319 (361)
Q Consensus 260 a~~~~~~s~~~~~~-----~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~-----~~~----------~~y~i~~~~~ 319 (361)
|..+...+..+... ..+...||. +.+ . ...++|.|.-.+|... ..+ -.|.|.+...
T Consensus 87 A~~g~~~S~w~~s~~F~p~~~t~igPP~-v~l--~-~~~~~i~V~i~~P~~~~~g~~~~l~~~~~~~~~~~~Y~v~~~~~ 162 (229)
T 1fyh_B 87 ARVGQKESAYAKSEEFAVCRDGKIGPPK-LDI--R-KEEKQIMIDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMN 162 (229)
T ss_dssp EEETTEECCCEECCCBCHHHHSBCCCCE-EEE--E-ECSSEEEEEEECCGGGC-----------CCSCSEEEEEEEEEET
T ss_pred EEcCCcccCCEeccceeeeeeeEECCCe-EEE--E-EeCCEEEEEEeCCCcccCCCcceeeecCcccccceEEEEEEEEC
Confidence 99987766544321 124455665 666 3 4456888888876320 011 2689988876
Q ss_pred CCCCCCCceeec---CC---CCceeEeccCCCCCceEEEEEEEEe
Q psy4956 320 RPGASSTPITKS---RD---EPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 320 ~~~~~~~~~~~~---~~---~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
+.+ ....... .. ....+.|.+ |.|++.|=|+|++..
T Consensus 163 ~s~--~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~YCv~v~~~~ 204 (229)
T 1fyh_B 163 GSE--IQYKILTQKEDDCDEIQCQLAIPV-SSLNSQYCVSAEGVL 204 (229)
T ss_dssp TEE--EEEEEESSSCTTBCSSEEEEEEEC-CTTCCEEEEEEEEEE
T ss_pred CCC--eeEEEEeecccCccccceeEEEee-CCCCCeEEEEEEEEe
Confidence 532 1111111 11 223477875 999999999999963
|
| >3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=8.3e-05 Score=57.28 Aligned_cols=166 Identities=13% Similarity=0.099 Sum_probs=88.7
Q ss_pred CCCccEEEEEeCCEEEEEeeCCCCCC-cccEEEEEEECCCC-CCCeEEeecC-CCCceEEEcCC--CCCcEEEEEEEEEe
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPISGK-YSGFKLKVISLSEK-TPPRIIGFTE-NPPAGYSLKDL--TPGGSYQVQLFSVY 166 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~~~~-~~~y~v~~~~~~~~-~~~~~~~~~~-~~~~~~~l~~L--~p~~~Y~v~v~a~~ 166 (361)
-|.|+++.+. +=.-.|+|+++.... -..|.++|...++. .|.....+.. ... .+.|+++ .+...|.+||+|..
T Consensus 4 ~~~Nv~~~S~-Nf~~iL~W~p~~~~~~~v~YtVqy~~~~~~~~W~~v~~C~nit~t-~CDLt~~~~~~~~~Y~~RV~A~~ 81 (199)
T 3s9d_B 4 ESCTFKISLR-NFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRS-FCDLTDEWRSTHEAYVTVLEGFS 81 (199)
T ss_dssp --CEEEEEEE-TTEEEEEEECSSCCSSCCEEEEEEEESSSCCCCEECGGGSSBSCS-EEECTTTCCCSSSCEEEEEEEEC
T ss_pred CceEEEEEEE-CCceEEEECCCCCCCCCcEEEEEEEEecCCCcceECCcCCccCCC-EEcCCCccccCcccEEEEEEEEC
Confidence 3567776653 446789999975322 34799999876422 3322222211 233 8999876 57788999999998
Q ss_pred CCCCcccceeeeec----cCCCCCcceEEEeccCCeEEEEeecCCCCC-cceEE-EEEEeCCCCCCceeEEe-eccCCCC
Q psy4956 167 DSKESVAYTSRNFT----TKPNTPGKFIVWFRNETTLLVLWQPSYPAS-IYTHY-KVSIDPPDAPESVLYVE-KEGEPPG 239 (361)
Q Consensus 167 ~~~~s~~~~~~~~~----t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~-~~~~y-~v~~~~~~~~~~~~~~~-~~~~~~~ 239 (361)
++..+. +....|. |...|| .+.+.... .++.|.=..|.-.+ ....| .+.|+............ ....-..
T Consensus 82 g~~~S~-~~s~~F~p~~~T~IgPP-~v~l~~~~-~~i~V~i~~P~~~~~~~~~y~sl~~~~~~~~~~k~~~~~~~~~~~~ 158 (199)
T 3s9d_B 82 GNTTLF-SCSHNFWLAIDMSFEPP-EFEIVGFT-NHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNMSG 158 (199)
T ss_dssp --CCEE-EEEEEECHHHHCEECCC-EEEEEECS-SCEEEEEECCC----CCCCCCEEEEEEEETTEEEEECCC----CCS
T ss_pred CCCCCc-eEecceehHHhCccCCC-EEEEEecC-CEEEEEEECCcccccccceeEEEEEEEEecccceEeeeeeeecccC
Confidence 776665 4444442 334445 56665443 45666655442111 11122 22332221111000000 0000012
Q ss_pred CcEEEecCCCCCCeEEEEEEEEe
Q psy4956 240 PAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 240 ~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
.....|.+|.|++.|.|+|++.-
T Consensus 159 ~~~~vi~~L~P~T~YCv~V~~~~ 181 (199)
T 3s9d_B 159 NFTYIIDKLIPNTNYCVSVYLEH 181 (199)
T ss_dssp EEEEEECSCCSSCEEEEEEEEEC
T ss_pred cceEEEeccCCCCcEEEEEEEEe
Confidence 24678999999999999999753
|
| >1y6k_R Interleukin-10 receptor alpha chain; helix bundle, receptor complex, immune system; 2.52A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1j7v_R* 1lqs_R 1y6m_R 1y6n_R | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0017 Score=50.86 Aligned_cols=163 Identities=14% Similarity=0.071 Sum_probs=99.4
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecC--CCCCC--eEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG--LVPGR--AYNISV 258 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--L~p~t--~Y~v~V 258 (361)
..+|.|+++...+ -.-.|.|+++...+....|.|+|...+...+... .... .-. .+.|++ +.... .|.++|
T Consensus 5 Lp~P~NV~~~S~N-f~~iL~W~p~~~~~~~~~YtVqy~~~~~~~W~~~-~~C~--~it-~CDlT~~~~d~~~~~~y~~RV 79 (214)
T 1y6k_R 5 LPSPPSVWFEAEF-FHHILHWTPIPQQSESTCYEVALLRYGIESWNSI-SQCS--QTL-SYDLTAVTLDLYHSNGYRARV 79 (214)
T ss_dssp CCCCSCEEEEEET-TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEE-EEEE--SSS-EEECGGGGTTGGGSSCEEEEE
T ss_pred CCCCceeEEEEEc-CcEEEEECCCCCCCCCeEEEEEEEEcCCCCCeeC-CCCC--ccc-eEECCCcccccccCccEEEEE
Confidence 3479999987554 5777899986444566789999987655444432 1111 112 788876 44543 899999
Q ss_pred EEEeCCCCCCceEE--EE---ecCCCCCccceEEeeecCCceEEEEeeCCCCC----CC-----c---eeEEEEEEECCC
Q psy4956 259 QTVSEDEISTPTTA--QY---RTIPLRPLSFTYDKASITSNSLRVVWEPPKGF----SE-----F---DKYQVSINVRRP 321 (361)
Q Consensus 259 ~a~~~~~~s~~~~~--~~---~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~----~~-----~---~~y~i~~~~~~~ 321 (361)
+|..++..|..... .+ .+...||. +.+ ....++|.|.-.+|... .. + ..|.+.+....+
T Consensus 80 rA~~~~~~S~w~~s~~~F~p~~t~igPP~-v~l---~~~~~~l~V~i~~P~~~~~~~~~~y~~~f~~~~~y~~~~~k~~~ 155 (214)
T 1y6k_R 80 RAVDGSRHSQWTVTNTRFSVDEVTLTVGS-VNL---EIHNGFILGKIQLPRPKMAPAQDTYESIFSHFREYEIAIRKVPG 155 (214)
T ss_dssp EEEETTEECCCEECSSCBCGGGEEBCCSE-EEE---EECSSEEEEEEECCCCSSSCTTCCHHHHSCSCEEEEEEEEEESS
T ss_pred EEecCCcccCCEecCCceeecccEECCCe-EEE---EEeCCEEEEEEECCCcccccchhhhhheeccccEEEEEEEcccc
Confidence 99998776654332 11 34455664 666 45566999999887421 00 1 138888776653
Q ss_pred CCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 322 GASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.... ..... ....+.+.. +.+++.|=|+|++..
T Consensus 156 ~~~~-~~~~~--~~~~l~~~~-p~~~t~YCv~v~~~~ 188 (214)
T 1y6k_R 156 QFTF-THKKV--KHEQFSLLT-SGEVGEFCVQVKPSV 188 (214)
T ss_dssp CSCC-EEEEE--SSSEEEEEC-CSCCSEEEEEEEEEE
T ss_pred cCcc-cceee--eeeeeeccC-CCCCCeEEEEEEEEe
Confidence 2111 11111 112344443 566999999999864
|
| >3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0004 Score=53.49 Aligned_cols=166 Identities=16% Similarity=0.160 Sum_probs=89.7
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCC-CCCceeEEeeccCCCCCcEEEecCC--CCCCeEEEEEEEE
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPD-APESVLYVEKEGEPPGPAQAAFKGL--VPGRAYNISVQTV 261 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L--~p~t~Y~v~V~a~ 261 (361)
.|.|+.+...+ -.-.|.|+++.....-..|.|+|.... ...+.. ..... .-..+.+.|+++ .+...|..+|+|.
T Consensus 4 ~~~Nv~~~S~N-f~~iL~W~p~~~~~~~v~YtVqy~~~~~~~~W~~-v~~C~-nit~t~CDLt~~~~~~~~~Y~~RV~A~ 80 (199)
T 3s9d_B 4 ESCTFKISLRN-FRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKV-VKNCA-NTTRSFCDLTDEWRSTHEAYVTVLEGF 80 (199)
T ss_dssp --CEEEEEEET-TEEEEEEECSSCCSSCCEEEEEEEESSSCCCCEE-CGGGS-SBSCSEEECTTTCCCSSSCEEEEEEEE
T ss_pred CceEEEEEEEC-CceEEEECCCCCCCCCcEEEEEEEEecCCCcceE-CCcCC-ccCCCEEcCCCccccCcccEEEEEEEE
Confidence 46688877544 467789998744333357999997542 223321 11111 223478889876 6788999999999
Q ss_pred eCCCCCCceEEEE----ecCCCCCccceEEeeecCCceEEEEeeCCCCC-CCceeE-EEEEEECCCCCCCC--ceee-cC
Q psy4956 262 SEDEISTPTTAQY----RTIPLRPLSFTYDKASITSNSLRVVWEPPKGF-SEFDKY-QVSINVRRPGASST--PITK-SR 332 (361)
Q Consensus 262 ~~~~~s~~~~~~~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~-~~~~~y-~i~~~~~~~~~~~~--~~~~-~~ 332 (361)
.+...+......+ .|..+|| .+.+ ...++++.|.=..|.-- .....| .+.|.....+.... .... ..
T Consensus 81 ~g~~~S~~~s~~F~p~~~T~IgPP-~v~l---~~~~~~i~V~i~~P~~~~~~~~~y~sl~~~~~~~~~~k~~~~~~~~~~ 156 (199)
T 3s9d_B 81 SGNTTLFSCSHNFWLAIDMSFEPP-EFEI---VGFTNHINVMVKFPSIVEEELQFDLSLVIEEQSEGIVKKHKPEIKGNM 156 (199)
T ss_dssp C--CCEEEEEEEECHHHHCEECCC-EEEE---EECSSCEEEEEECCC----CCCCCCEEEEEEEETTEEEEECCC----C
T ss_pred CCCCCCceEecceehHHhCccCCC-EEEE---EecCCEEEEEEECCcccccccceeEEEEEEEEecccceEeeeeeeecc
Confidence 8766555222222 1233444 4555 33455777777766311 012223 34444432221000 0010 11
Q ss_pred CCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 333 DEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 333 ~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.......+.+ |.|+|.|=|+|.+..
T Consensus 157 ~~~~~~vi~~-L~P~T~YCv~V~~~~ 181 (199)
T 3s9d_B 157 SGNFTYIIDK-LIPNTNYCVSVYLEH 181 (199)
T ss_dssp CSEEEEEECS-CCSSCEEEEEEEEEC
T ss_pred cCcceEEEec-cCCCCcEEEEEEEEe
Confidence 2334678876 999999999999753
|
| >1wft_A 1700129L13RIK protein; FN3 domain, similar to HOST cell factor 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00019 Score=47.84 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=62.9
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCC----cee-EEeeccCCCCCcEEEec---------
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPE----SVL-YVEKEGEPPGPAQAAFK--------- 246 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~--------- 246 (361)
.|.+|..+++.. +...+.|+|+||... |.|..|-|.+....... ... .+.. .-+...++++.
T Consensus 7 fPgAPs~ikIsK-~~dgahLsWePP~~~sG~I~EYSVYlAvrs~~~~~~~~qL~FvrV--YcG~~~~C~V~~~~L~~ahi 83 (123)
T 1wft_A 7 GPGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRI--YCGLKTSCTVTAGQLANAHI 83 (123)
T ss_dssp CCCCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEE--EEESCSEEEEEHHHHTTCCC
T ss_pred CCCCCcceEEee-CCCceEEeecCCCCCCcccEEEEEEEEecccccCCCcCeeeEEEE--EecCCcceEecccchhhhhh
Confidence 378899999874 567899999988544 89999999887543211 111 1100 01123566665
Q ss_pred CCCCCCeEEEEEEEEeCCCCCCceEEEEec
Q psy4956 247 GLVPGRAYNISVQTVSEDEISTPTTAQYRT 276 (361)
Q Consensus 247 ~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~t 276 (361)
++.+-..|.|+|.|.|..|-++.+.+.-..
T Consensus 84 d~t~kpAiiFRIaArNeKGYGPaTqVrwlq 113 (123)
T 1wft_A 84 DYTSRPAIVFRISAKNEKGYGPATQIRWLQ 113 (123)
T ss_dssp BCSSSCEEEEEEEEBSSSSBCCCEEEEEEC
T ss_pred ccCCCceEEEEEEeecCCCCCCcccceehh
Confidence 666677999999999999988887765443
|
| >1wft_A 1700129L13RIK protein; FN3 domain, similar to HOST cell factor 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00046 Score=46.01 Aligned_cols=82 Identities=15% Similarity=0.255 Sum_probs=58.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCC---CCe----EEeecCCCCceEEEc---------
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKT---PPR----IIGFTENPPAGYSLK--------- 150 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~---~~~----~~~~~~~~~~~~~l~--------- 150 (361)
-|.+|.++++.. +...+.|+|+||. .|.+..|-+++...+... ..+ ...+ .... ++++.
T Consensus 7 fPgAPs~ikIsK-~~dgahLsWePP~~~sG~I~EYSVYlAvrs~~~~~~~~qL~FvrVYc-G~~~-~C~V~~~~L~~ahi 83 (123)
T 1wft_A 7 GPGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYC-GLKT-SCTVTAGQLANAHI 83 (123)
T ss_dssp CCCCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEE-ESCS-EEEEEHHHHTTCCC
T ss_pred CCCCCcceEEee-CCCceEEeecCCCCCCcccEEEEEEEEecccccCCCcCeeeEEEEEe-cCCc-ceEecccchhhhhh
Confidence 367788887765 4678999999998 568999999886643221 111 1112 3344 77776
Q ss_pred CCCCCcEEEEEEEEEeCCCCccc
Q psy4956 151 DLTPGGSYQVQLFSVYDSKESVA 173 (361)
Q Consensus 151 ~L~p~~~Y~v~v~a~~~~~~s~~ 173 (361)
++.+-..|.|||.|.|..|.+..
T Consensus 84 d~t~kpAiiFRIaArNeKGYGPa 106 (123)
T 1wft_A 84 DYTSRPAIVFRISAKNEKGYGPA 106 (123)
T ss_dssp BCSSSCEEEEEEEEBSSSSBCCC
T ss_pred ccCCCceEEEEEEeecCCCCCCc
Confidence 56666789999999999988854
|
| >2hft_A Human tissue factor; coagulation factor; 1.69A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1jps_T 1ahw_C 1boy_A 1tfh_A 1wtg_T* 1wss_T* 1wqv_T* 1wun_T* 1wv7_T* 2zp0_T* 2zwl_T* 2zzu_T* 1z6j_T* 2aei_T* 2flb_T* 2b7d_T* 2f9b_T* 1o5d_T* 2flr_T* 1w0y_T* ... | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00071 Score=53.15 Aligned_cols=160 Identities=11% Similarity=0.096 Sum_probs=97.0
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecC-C--CCCCeEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG-L--VPGRAYNISVQ 259 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L--~p~t~Y~v~V~ 259 (361)
..+|.|+++...+ -.-.|.|+++.. -..|.|+|...+. .+....... ..+.+.|++ + .....|.++|+
T Consensus 6 lp~P~NV~~~S~N-f~~iL~W~p~~~---n~~YtVqy~~~~~-~W~~~C~~i----t~t~CDlT~~~~~d~~~~y~~RVr 76 (218)
T 2hft_A 6 TVAAYNLTWKSTN-FKTILEWEPKPV---NQVYTVQISTKSG-DWKSKCFYT----TDTECDLTDEIVKDVKQTYLARVF 76 (218)
T ss_dssp CCCCEEEEEEEET-TEEEEEEECCCS---SEEEEEEEEETTS-CCEEEEEEE----SCSEEECHHHHGGGTTSCEEEEEE
T ss_pred CCCCceeEEEEEc-CeEEEEEcCCCC---CeEEEEEEEEcCc-chHhhCcCC----CCCEEcCCcccccCCCceEEEEEE
Confidence 3479999998654 467789998743 4789999987653 333322111 136788876 3 67778999999
Q ss_pred EEeCC---CCCC----ceEEE--E----ecCCCCCccceEEeeecCCceEEEEeeCCCCC--------------CCceeE
Q psy4956 260 TVSED---EIST----PTTAQ--Y----RTIPLRPLSFTYDKASITSNSLRVVWEPPKGF--------------SEFDKY 312 (361)
Q Consensus 260 a~~~~---~~s~----~~~~~--~----~t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~--------------~~~~~y 312 (361)
|..+. ..|. +.... + .+...||. +.+ .....++|.|.-.+|... .....|
T Consensus 77 A~~~~~~~~~S~~~~s~w~~s~~F~p~~~t~igPP~-v~l--~~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~l~Y 153 (218)
T 2hft_A 77 SYPAGNVESTGSAGEPLYENSPEFTPYLETNLGQPT-IQS--FEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIY 153 (218)
T ss_dssp EEECSSCCCC----CCCEEECCCBCHHHHSBCCCCC-EEE--EEEETTEEEEEECCCEEEEEETTEEEEHHHHHGGGCEE
T ss_pred EEeCCCCCccccccccCcccccceeehHhCEECCCE-EEE--EECCCCEEEEEEECCCCccccCCcccchhHhcCCCeEE
Confidence 99985 2221 11111 1 24455665 677 444444888888876420 113569
Q ss_pred EEEEEECCCCCC-----CCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 313 QVSINVRRPGAS-----STPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 313 ~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.|.|...+.... .... .... ...+ +.+ |.|++.|=|+|+|..
T Consensus 154 ~v~~w~~~s~~~~~~~~~~k~-~~~~-~~~~-~~~-L~p~t~YCv~v~~~~ 200 (218)
T 2hft_A 154 TLYYWKSSSQEKGEFRSGKKT-AKTN-TNEF-LID-VDKGENYCFSVQAVI 200 (218)
T ss_dssp EEEEECCC---------CCEE-EEES-SSEE-EEE-CCTTCCCEEEEEEEC
T ss_pred EEEEEECCCCcccccccceEE-EecC-CceE-Eec-CCCCCCEeEEEEEEE
Confidence 999888764311 0111 1112 2334 456 999999999999974
|
| >3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0036 Score=50.80 Aligned_cols=79 Identities=15% Similarity=0.157 Sum_probs=59.6
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCC-C-CCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK-T-PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
|.+|..|.+.. .+..+.|+|+++ ...+..|+| ||..+.. . ..+...+..+.+ +|+-.++.+|+.|.+.|.+.+.
T Consensus 18 ~~~~~~L~at~-~~~~v~LsWs~s-~~~v~~~~V-YRdT~s~~sgr~ria~~~~st~-tytDt~~~~GttYyYwVk~~~~ 93 (344)
T 3b4n_A 18 FAAQTTLMLSQ-KSDVNYLGWSTD-ESKVARQEV-YRGTTSNPDLRERIAVLDAETR-TFKDADTNSGLNYWYWVDVVSE 93 (344)
T ss_dssp --CCEEEEEEE-ETTEEEEEEEEC-CSSEEEEEE-EEESSSCGGGCEEEEEECSSCC-EEEECCCCTTCCCEEEEEEEET
T ss_pred CCCCceeeeec-cCCeEEEEeecC-CCCeeeEEE-EccCCCCCCcceEEEeeccccc-EEEecCcCCCcEEEEEEEEecC
Confidence 55678888877 788999999985 347899999 5665443 2 334455556666 9999999999999999999987
Q ss_pred CCCcc
Q psy4956 168 SKESV 172 (361)
Q Consensus 168 ~~~s~ 172 (361)
.+.+.
T Consensus 94 ngs~~ 98 (344)
T 3b4n_A 94 NQAQV 98 (344)
T ss_dssp TCCEE
T ss_pred CCccc
Confidence 66553
|
| >3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0043 Score=50.40 Aligned_cols=77 Identities=14% Similarity=0.109 Sum_probs=55.3
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKT 356 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 356 (361)
.|..|..|.+ ....+.+.|+|..+.. .+..|+|.--..........+.....+.++|+-.+ +..|+.|.++|++
T Consensus 17 ~~~~~~~L~a---t~~~~~v~LsWs~s~~--~v~~~~VYRdT~s~~sgr~ria~~~~st~tytDt~-~~~GttYyYwVk~ 90 (344)
T 3b4n_A 17 SFAAQTTLML---SQKSDVNYLGWSTDES--KVARQEVYRGTTSNPDLRERIAVLDAETRTFKDAD-TNSGLNYWYWVDV 90 (344)
T ss_dssp ---CCEEEEE---EEETTEEEEEEEECCS--SEEEEEEEEESSSCGGGCEEEEEECSSCCEEEECC-CCTTCCCEEEEEE
T ss_pred CCCCCceeee---eccCCeEEEEeecCCC--CeeeEEEEccCCCCCCcceEEEeecccccEEEecC-cCCCcEEEEEEEE
Confidence 4556788888 4488899999998754 68899985443332222334455556778999986 9999999999999
Q ss_pred EeC
Q psy4956 357 VSG 359 (361)
Q Consensus 357 ~~~ 359 (361)
.++
T Consensus 91 ~~~ 93 (344)
T 3b4n_A 91 VSE 93 (344)
T ss_dssp EET
T ss_pred ecC
Confidence 985
|
| >3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha; GM-CSF, receptor complex, dodecamer, disease mutation, glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.009 Score=41.31 Aligned_cols=79 Identities=14% Similarity=0.296 Sum_probs=46.5
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCCCCce----eEEEEEEECCCCC-CCCceeec-CCCCceeEeccCCCCCceE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFD----KYQVSINVRRPGA-SSTPITKS-RDEPTQCDMSEGLEPGRTY 350 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~----~y~i~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~L~p~t~Y 350 (361)
.+.||.++++ .. ..+.+.|+|+.|.....+. .|++++.....+. ........ ....+.+.+.. +.|...|
T Consensus 17 rl~PP~nvtv--~~-~~s~~~IqW~~P~s~~~~~~~cF~Yev~I~~~~~~~~~~~q~~~~~~~~~~~~~~~~-~~~~~~y 92 (120)
T 3cxe_C 17 XFNPPSNVTV--RC-NTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPS-SEPRAKH 92 (120)
T ss_dssp CCCCCBCCCE--EE-CSSBEEECCBCCCSSCSSCCEEEEEECCTTSCCCSSCCSCEEECCCSSSCCCCCCBC-CSTTCBC
T ss_pred CCCCCceEEE--EE-cCCeEEEEECCCCcccccccccEEEEEEEcCCCCCccceEEEEEeeccccceeEeee-cCCCccE
Confidence 4678999999 44 4455999999983211122 3433332222111 11112211 11246777886 9999999
Q ss_pred EEEEEEEeC
Q psy4956 351 QVLVKTVSG 359 (361)
Q Consensus 351 ~v~V~a~~~ 359 (361)
.|+|+|...
T Consensus 93 tVrVRa~~~ 101 (120)
T 3cxe_C 93 SVKIRAADV 101 (120)
T ss_dssp CCEEEEEES
T ss_pred EEEEEeCCC
Confidence 999999854
|
| >3bes_R Interferon-gamma binding protein C4R; orthopoxvirus, protein complex antiviral defense, cytokine, glycoprotein, receptor, immune; HET: NAG BMA; 2.20A {Ectromelia virus} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.23 Score=39.37 Aligned_cols=155 Identities=12% Similarity=0.111 Sum_probs=86.8
Q ss_pred CCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCC--CCCcEEEEEEEEEeCCCC
Q psy4956 93 PTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDL--TPGGSYQVQLFSVYDSKE 170 (361)
Q Consensus 93 p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~p~~~Y~v~v~a~~~~~~ 170 (361)
|.++++.+. +-.-.|.|++ + ..|.++|..-+...|.. .-...... .+.|++. .++..|.+||+| +.
T Consensus 2 ~~NV~~~S~-NF~~IL~W~p--n---~tYtVQyk~yg~~~W~~-~C~ni~~t-~CDlS~~~~d~~~~Y~aRV~A----~e 69 (250)
T 3bes_R 2 ITSYKFESV-NFDSKIEWTG--N---GLYNISLRNYGIKTWQT-MYTNVPEG-TYDISGFPNNDFVSFWVKFEQ----GD 69 (250)
T ss_dssp EEEEEEEEE-TTEEEEEEEE--S---SCEEEEEEETTCCSCEE-EEEEECSE-EEECTTSSCSSSSCEEEEEEE----TT
T ss_pred CEEEEEEEE-CCccEEEeCC--C---CEEEEEEEECCcChhHh-hCcCCCCC-EEECCCccccCCceEEEEEEE----ec
Confidence 567777664 4456789998 2 58999998875434543 21122334 8888873 356789999999 33
Q ss_pred cccce---eeeeccCCCCCcceEEEeccCCeEEEEeecCCCC--C-------c------ceEEEEEEeCCCCCCceeEEe
Q psy4956 171 SVAYT---SRNFTTKPNTPGKFIVWFRNETTLLVLWQPSYPA--S-------I------YTHYKVSIDPPDAPESVLYVE 232 (361)
Q Consensus 171 s~~~~---~~~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~-------~------~~~y~v~~~~~~~~~~~~~~~ 232 (361)
+.... .....+...|| .+.+.... .+|.|.-.+|... | . .-.|.|.+......+... ..
T Consensus 70 s~~F~~~~~p~~~T~IGPP-~V~l~~~~-~sI~V~I~~P~~~~~g~~~siy~~d~~~~~~l~Y~v~~~~~~s~e~~~-~~ 146 (250)
T 3bes_R 70 YKVDKYCTGLCIEVKIGPP-TVTLTEYD-DHINLYIEHPYATRGSKKIPIYKRNDMCDIYLLYTANFTFGDSEEPVI-YD 146 (250)
T ss_dssp EEEEEEECCHHHHCBCCCC-EEEEEEET-TEEEEEEECCEEEETTEEEECSSCGGGTTCCCEEEEEEEETTCSSCEE-EE
T ss_pred cceeecCCCcccceEECCC-eEEEEEeC-CEEEEEEECCCcccCCCceeeeccccccccceEEEEEEEECCCCcceE-EE
Confidence 32210 01112334445 57776544 3777766554311 1 1 257899887644422111 11
Q ss_pred eccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 233 KEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
......+...+. -.|.|++.|.|+|++...
T Consensus 147 v~~~~~~~~~~~-~~l~p~t~YCV~Vq~~i~ 176 (250)
T 3bes_R 147 IDDYDCTSTGCS-IDFATTEKVCVMAQGATE 176 (250)
T ss_dssp CCGGGBCSSEEE-EEECCSSCEEEEEEEECC
T ss_pred eeecccCcceeE-EEeCCCCcEEEEEEEeCc
Confidence 110001112222 245599999999999865
|
| >3bes_R Interferon-gamma binding protein C4R; orthopoxvirus, protein complex antiviral defense, cytokine, glycoprotein, receptor, immune; HET: NAG BMA; 2.20A {Ectromelia virus} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.1 Score=41.39 Aligned_cols=153 Identities=9% Similarity=0.066 Sum_probs=88.4
Q ss_pred CcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCC--CCCCeEEEEEEEEeC
Q psy4956 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL--VPGRAYNISVQTVSE 263 (361)
Q Consensus 186 p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~p~t~Y~v~V~a~~~ 263 (361)
|.|+++...+ -.-.|.|++. ..|.|+|...+...+........ .+.+.|++. .++..|.++|+|
T Consensus 2 ~~NV~~~S~N-F~~IL~W~pn------~tYtVQyk~yg~~~W~~~C~ni~----~t~CDlS~~~~d~~~~Y~aRV~A--- 67 (250)
T 3bes_R 2 ITSYKFESVN-FDSKIEWTGN------GLYNISLRNYGIKTWQTMYTNVP----EGTYDISGFPNNDFVSFWVKFEQ--- 67 (250)
T ss_dssp EEEEEEEEET-TEEEEEEEES------SCEEEEEEETTCCSCEEEEEEEC----SEEEECTTSSCSSSSCEEEEEEE---
T ss_pred CEEEEEEEEC-CccEEEeCCC------CEEEEEEEECCcChhHhhCcCCC----CCEEECCCccccCCceEEEEEEE---
Confidence 6677777554 3566899982 46999998776444544322221 378888873 456789999999
Q ss_pred CCCCCceE----EEEecCCCCCccceEEeeecCCceEEEEeeCCC----CC-----CC------ceeEEEEEEECCCCCC
Q psy4956 264 DEISTPTT----AQYRTIPLRPLSFTYDKASITSNSLRVVWEPPK----GF-----SE------FDKYQVSINVRRPGAS 324 (361)
Q Consensus 264 ~~~s~~~~----~~~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~----~~-----~~------~~~y~i~~~~~~~~~~ 324 (361)
+.+.... ....+..+|| .+++ . ...++|.|.=.+|. |. .. ...|.|.+...+..+.
T Consensus 68 -~es~~F~~~~~p~~~T~IGPP-~V~l--~-~~~~sI~V~I~~P~~~~~g~~~siy~~d~~~~~~l~Y~v~~~~~~s~e~ 142 (250)
T 3bes_R 68 -GDYKVDKYCTGLCIEVKIGPP-TVTL--T-EYDDHINLYIEHPYATRGSKKIPIYKRNDMCDIYLLYTANFTFGDSEEP 142 (250)
T ss_dssp -TTEEEEEEECCHHHHCBCCCC-EEEE--E-EETTEEEEEEECCEEEETTEEEECSSCGGGTTCCCEEEEEEEETTCSSC
T ss_pred -eccceeecCCCcccceEECCC-eEEE--E-EeCCEEEEEEECCCcccCCCceeeeccccccccceEEEEEEEECCCCcc
Confidence 2232221 0112334455 4566 3 33458888777763 20 01 2578998877543111
Q ss_pred CC-ceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 325 ST-PITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 325 ~~-~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
.. .+....-..+...+ . |.|++.|=|.|.|...
T Consensus 143 ~~~~v~~~~~~~~~~~~-~-l~p~t~YCV~Vq~~i~ 176 (250)
T 3bes_R 143 VIYDIDDYDCTSTGCSI-D-FATTEKVCVMAQGATE 176 (250)
T ss_dssp EEEECCGGGBCSSEEEE-E-ECCSSCEEEEEEEECC
T ss_pred eEEEeeecccCcceeEE-E-eCCCCcEEEEEEEeCc
Confidence 11 11101112234455 4 8899999999999754
|
| >2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0029 Score=42.98 Aligned_cols=88 Identities=20% Similarity=0.386 Sum_probs=53.7
Q ss_pred eeeEEEec----CCCCCCccEEEEE-eCCEEEEEeeCCC-------CC-CcccEEEEEEECCCCCCCeEEeecCCCCceE
Q psy4956 81 TWTASITT----PPDPPTNLSVNVR-SGKTAQIFWSPPI-------SG-KYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147 (361)
Q Consensus 81 ~~~~~~~t----~~~~p~~l~~~~~-~~~~v~l~W~~p~-------~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~ 147 (361)
...+.|.| .|++|.++++..- ....+.++|.|+. ++ .+.+|.|+. + ..+...+.....-+.
T Consensus 5 ~a~veF~Tl~aGpPdpP~dVqVe~Gp~pgtLlVsW~Pvt~~~~g~Snga~VtGY~VYa----d--GqkV~eV~~PTad~~ 78 (130)
T 2csp_A 5 SSGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYA----K--GQRVAEVIFPTADST 78 (130)
T ss_dssp CCCSCCCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEES----S--SSEEEEECCTTCSEE
T ss_pred ceEEEEecCCCCCCCCCceeEEEeCCCCcEEEEEeECCcccCCCCCCCcceEEEEEEe----C--CcEEEEecCCCCCcE
Confidence 33455555 4788888887753 3578999999976 33 588999963 2 233334433332133
Q ss_pred EE--cCCCCCcEEEEEEEEEeCCCCcccc
Q psy4956 148 SL--KDLTPGGSYQVQLFSVYDSKESVAY 174 (361)
Q Consensus 148 ~l--~~L~p~~~Y~v~v~a~~~~~~s~~~ 174 (361)
.| ..|..-..+.+.||.....|+|..+
T Consensus 79 lv~l~~L~~l~~~~VtVRT~S~~GeS~DS 107 (130)
T 2csp_A 79 AVELVRLRSLEAKGVTVRTLSAQGESVDS 107 (130)
T ss_dssp EEESHHHHHHTCSCBEEEEEESSCCCCCC
T ss_pred EEEHHHhcCCCCcEEEEEeccCCccccCC
Confidence 33 2333323467888888888877543
|
| >4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.047 Score=29.46 Aligned_cols=37 Identities=24% Similarity=0.410 Sum_probs=30.6
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINV 318 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~ 318 (361)
.|.+|..+++ ...+.+++.|.|.+... .+.|.++...
T Consensus 6 kP~~PsrVQL--vRAst~sLEv~W~~vpt---A~~YiLQiqk 42 (45)
T 4go6_A 6 KPPPPARVQL--VRANTNSLEVSWGAVAT---ADSYLLQLQK 42 (45)
T ss_dssp CCCCCEEEEE--EEECSSCEEEEEECCTT---CSEEEEEEEE
T ss_pred cCCCcceEEE--EEeccceEEEEcCCCcc---hheeEEEEEe
Confidence 5778888888 89999999999998653 4889888764
|
| >4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.06 Score=29.06 Aligned_cols=39 Identities=23% Similarity=0.398 Sum_probs=31.3
Q ss_pred ccCCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeC
Q psy4956 180 TTKPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDP 221 (361)
Q Consensus 180 ~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~ 221 (361)
+.+|.+|..++....+.+++.|+|.+. ...+.|.++.+.
T Consensus 4 t~kP~~PsrVQLvRAst~sLEv~W~~v---ptA~~YiLQiqk 42 (45)
T 4go6_A 4 TEKPPPPARVQLVRANTNSLEVSWGAV---ATADSYLLQLQK 42 (45)
T ss_dssp CSCCCCCEEEEEEEECSSCEEEEEECC---TTCSEEEEEEEE
T ss_pred cccCCCcceEEEEEeccceEEEEcCCC---cchheeEEEEEe
Confidence 345889999999999999999999875 235788887764
|
| >3cxe_C Granulocyte-macrophage colony-stimulating factor subunit alpha; GM-CSF, receptor complex, dodecamer, disease mutation, glyco membrane; HET: NAG BMA; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.013 Score=40.55 Aligned_cols=78 Identities=14% Similarity=0.221 Sum_probs=46.7
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcc--e--EEEEEEeCCCCCC--ceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIY--T--HYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~--~--~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
+.||.++.+... .+.+.|.|+.|.....+ . .|+|.+....... ........ ....+.+.|.++.|...|.|
T Consensus 18 l~PP~nvtv~~~-~s~~~IqW~~P~s~~~~~~~cF~Yev~I~~~~~~~~~~~q~~~~~--~~~~~~~~~~~~~~~~~ytV 94 (120)
T 3cxe_C 18 FNPPSNVTVRCN-TTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVS--GDLENRYNFPSSEPRAKHSV 94 (120)
T ss_dssp CCCCBCCCEEEC-SSBEEECCBCCCSSCSSCCEEEEEECCTTSCCCSSCCSCEEECCC--SSSCCCCCCBCCSTTCBCCC
T ss_pred CCCCceEEEEEc-CCeEEEEECCCCcccccccccEEEEEEEcCCCCCccceEEEEEee--ccccceeEeeecCCCccEEE
Confidence 678999998764 45599999887321112 2 3444333222111 11222221 11136778888999999999
Q ss_pred EEEEEeC
Q psy4956 257 SVQTVSE 263 (361)
Q Consensus 257 ~V~a~~~ 263 (361)
+|+|...
T Consensus 95 rVRa~~~ 101 (120)
T 3cxe_C 95 KIRAADV 101 (120)
T ss_dssp EEEEEES
T ss_pred EEEeCCC
Confidence 9999864
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=95.35 E-value=0.015 Score=53.28 Aligned_cols=82 Identities=18% Similarity=0.238 Sum_probs=49.9
Q ss_pred cCCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCce--------------------eecCCCC
Q psy4956 276 TIPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPI--------------------TKSRDEP 335 (361)
Q Consensus 276 t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~--------------------~~~~~~~ 335 (361)
..|..|.+|.+.....+++++.|.|+.|.....+..|.|......-....... ....-..
T Consensus 33 ~~~~~p~~~~~~t~~~~~~si~l~~~~p~~~~~~~~y~vy~ng~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (608)
T 2uvf_A 33 SSLDAPQQLQVPTLAYDESSIVLVWKAPEDTRKIVDYQIFSAGKLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIVM 112 (608)
T ss_dssp ---CCCEEEECCTTCBCSSCEEEEEECCSCCTTEEEEEEEETTEEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCCC
T ss_pred cCCCCCCceEeeecccCCcEEEEEEeCCccccccccEEEEECCEEeEeeccccccccccccccccccccccccccceeee
Confidence 35667887776212568889999999997666778898865210000000000 0000123
Q ss_pred ceeEeccCCCCCceEEEEEEEEe
Q psy4956 336 TQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 336 ~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
+.+.+.+ |+|++.|.|+|.|..
T Consensus 113 ~~~~v~~-L~p~T~Y~~~v~a~d 134 (608)
T 2uvf_A 113 QNFTVIG-LKPETSYQFTVKAQY 134 (608)
T ss_dssp CEEEECS-CCTTCEEEEEEEEEE
T ss_pred eeEEecC-CCCCCEEEEEEEEec
Confidence 5788985 999999999999964
|
| >2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.038 Score=50.63 Aligned_cols=78 Identities=17% Similarity=0.283 Sum_probs=49.7
Q ss_pred ecCCCCCCccEEE--EEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEe-------------------------
Q psy4956 87 TTPPDPPTNLSVN--VRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIG------------------------- 138 (361)
Q Consensus 87 ~t~~~~p~~l~~~--~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~------------------------- 138 (361)
...|.+|.+|.+. ..+.+++.|.|+.|. ...+..|.|.. .........
T Consensus 32 ~~~~~~p~~~~~~t~~~~~~si~l~~~~p~~~~~~~~y~vy~----ng~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (608)
T 2uvf_A 32 SSSLDAPQQLQVPTLAYDESSIVLVWKAPEDTRKIVDYQIFS----AGKLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQ 107 (608)
T ss_dssp ----CCCEEEECCTTCBCSSCEEEEEECCSCCTTEEEEEEEE----TTEEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCS
T ss_pred ccCCCCCCceEeeecccCCcEEEEEEeCCccccccccEEEEE----CCEEeEeecccccccccccccccccccccccccc
Confidence 3457788888764 457889999999987 34567788854 111111100
Q ss_pred ecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 139 FTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 139 ~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
..-... ++.+.+|.|+++|.|.|.+....+
T Consensus 108 ~~~~~~-~~~v~~L~p~T~Y~~~v~a~d~~G 137 (608)
T 2uvf_A 108 HKIVMQ-NFTVIGLKPETSYQFTVKAQYADG 137 (608)
T ss_dssp CCCCCC-EEEECSCCTTCEEEEEEEEEETTS
T ss_pred ceeeee-eEEecCCCCCCEEEEEEEEecCCC
Confidence 000123 789999999999999999986554
|
| >2csp_A RIM-BP2, RIM binding protein 2; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.17 E-value=0.031 Score=38.03 Aligned_cols=88 Identities=22% Similarity=0.236 Sum_probs=51.4
Q ss_pred eeeeeccC----CCCCcceEEEec-cCCeEEEEeecCCC-------CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcE
Q psy4956 175 TSRNFTTK----PNTPGKFIVWFR-NETTLLVLWQPSYP-------ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQ 242 (361)
Q Consensus 175 ~~~~~~t~----p~~p~~l~~~~~-~~~~~~v~W~~~~~-------~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (361)
....|+|. |++|.++++..- .+..+.|+|.|+.. ...+++|.|+-. +... .+...-..+..-
T Consensus 6 a~veF~Tl~aGpPdpP~dVqVe~Gp~pgtLlVsW~Pvt~~~~g~Snga~VtGY~VYad---GqkV---~eV~~PTad~~l 79 (130)
T 2csp_A 6 SGVEFSTLPAGPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAK---GQRV---AEVIFPTADSTA 79 (130)
T ss_dssp CCSCCCCCCCCCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESS---SSEE---EEECCTTCSEEE
T ss_pred eEEEEecCCCCCCCCCceeEEEeCCCCcEEEEEeECCcccCCCCCCCcceEEEEEEeC---CcEE---EEecCCCCCcEE
Confidence 34455554 788999998753 45589999988541 147889999532 2111 111110111222
Q ss_pred EEecCCCCCCeEEEEEEEEeCCCCCC
Q psy4956 243 AAFKGLVPGRAYNISVQTVSEDEIST 268 (361)
Q Consensus 243 ~~~~~L~p~t~Y~v~V~a~~~~~~s~ 268 (361)
..+..|+--..+.|+|+.....|+|.
T Consensus 80 v~l~~L~~l~~~~VtVRT~S~~GeS~ 105 (130)
T 2csp_A 80 VELVRLRSLEAKGVTVRTLSAQGESV 105 (130)
T ss_dssp EESHHHHHHTCSCBEEEEEESSCCCC
T ss_pred EEHHHhcCCCCcEEEEEeccCCcccc
Confidence 33333443345788999998887763
|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
Probab=93.52 E-value=1.9 Score=32.77 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=66.3
Q ss_pred ceEEecCCCCCceEEEEEEEecCCcCccceeeEEEecC-CCCCCccEEEEE-------eCCEEEEEeeCCC-CCCcccEE
Q psy4956 52 DNIEFSEGLPGTKYDFYLYYTNSTVHDWLTWTASITTP-PDPPTNLSVNVR-------SGKTAQIFWSPPI-SGKYSGFK 122 (361)
Q Consensus 52 ~~~~i~~L~p~t~Y~i~V~a~~~~~~~~~~~~~~~~t~-~~~p~~l~~~~~-------~~~~v~l~W~~p~-~~~~~~y~ 122 (361)
-++.+..+. ...|.|+++|....|..+.+....+... ..+| .+.+... ....+.|+|.... .+.+..++
T Consensus 51 ys~~~~~~~-~G~htlta~A~D~aGn~s~s~~v~vtV~~~~~P-tv~itsP~~g~~~~~~~~vtl~~~AsD~~g~V~~Ve 128 (190)
T 3pdd_A 51 YTAKITGAA-VGAYNLKAVAVLSDGRRIESPVTPVLVKVIVKP-TVKLTAPKSNVVAYGNEFLKITATASDSDGKISRVD 128 (190)
T ss_dssp EEEEECSCC-SEEEEEEEEEEETTSCEEECCCEEEEEECCCCC-EEEEEECCTTCCCBTTSEEEEEEEEECSSSCEEEEE
T ss_pred eEEEeccCC-CccEEEEEEEEECCCCEeeecceeEEeccCCCC-ceeecCCCCCcEEecCCeEEEEEEEECCCCcEEEEE
Confidence 455566654 4579999999876656544333333332 3333 2233221 2457899997643 23466666
Q ss_pred EEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccC
Q psy4956 123 LKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 123 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~ 182 (361)
+.. +.. .+.........+.... +...|.|.++|....|....+....++..
T Consensus 129 ~~~----dg~---~v~t~t~~~y~~~~~~--~~G~~tl~a~A~D~aGn~s~s~~vtvtv~ 179 (190)
T 3pdd_A 129 FLV----DGE---VIGSDREAPYEYEWKA--VEGNHEISVIAYDDDDAASTPDSVKIFVK 179 (190)
T ss_dssp EEE----TTE---EEEEECSSSEEEEEEC--CSEEEEEEEEEEETTCCBCCCEEEEEEEB
T ss_pred EEE----CCE---EEecccCCCEEEEEec--CCeeEEEEEEEEECCCCEEecceEEEEEC
Confidence 643 111 1111111112444444 77799999999998776655455555544
|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
Probab=90.11 E-value=4.9 Score=30.40 Aligned_cols=154 Identities=15% Similarity=0.151 Sum_probs=81.7
Q ss_pred CCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceeeeeccC
Q psy4956 103 GKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 103 ~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~ 182 (361)
+..+.|.|....++.+..+++.. ++. .+.......+.+.+..+. ...|.+.++|....|....+....++-.
T Consensus 16 g~~vtv~~~As~d~~V~~Ve~~~----dg~---~v~~~t~~~ys~~~~~~~-~G~htlta~A~D~aGn~s~s~~v~vtV~ 87 (190)
T 3pdd_A 16 GKDINISATVKSKTPVSKVEFYN----GDT---LISSDTTAPYTAKITGAA-VGAYNLKAVAVLSDGRRIESPVTPVLVK 87 (190)
T ss_dssp TSCEEEEEEECCSSCEEEEEEEE----TTE---EEEEECSSSEEEEECSCC-SEEEEEEEEEEETTSCEEECCCEEEEEE
T ss_pred CCeEEEEEEEeCCCCEEEEEEEE----CCE---EEccccCCceEEEeccCC-CccEEEEEEEEECCCCEeeecceeEEec
Confidence 34789999775455666666643 111 111111121356666654 4589999999987766533222222221
Q ss_pred -CCCCcceEEEe--c-----cCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeE
Q psy4956 183 -PNTPGKFIVWF--R-----NETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 183 -p~~p~~l~~~~--~-----~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 254 (361)
..+|. +.+.. . ....+.|+|......+.+..+.+.... .. +... ......+.... +...|
T Consensus 88 ~~~~Pt-v~itsP~~g~~~~~~~~vtl~~~AsD~~g~V~~Ve~~~dg---~~----v~t~--t~~~y~~~~~~--~~G~~ 155 (190)
T 3pdd_A 88 VIVKPT-VKLTAPKSNVVAYGNEFLKITATASDSDGKISRVDFLVDG---EV----IGSD--REAPYEYEWKA--VEGNH 155 (190)
T ss_dssp CCCCCE-EEEEECCTTCCCBTTSEEEEEEEEECSSSCEEEEEEEETT---EE----EEEE--CSSSEEEEEEC--CSEEE
T ss_pred cCCCCc-eeecCCCCCcEEecCCeEEEEEEEECCCCcEEEEEEEECC---EE----Eecc--cCCCEEEEEec--CCeeE
Confidence 22332 22222 1 234689999765334557777775421 11 1111 11124444444 56699
Q ss_pred EEEEEEEeCCCCC-CceEEEEec
Q psy4956 255 NISVQTVSEDEIS-TPTTAQYRT 276 (361)
Q Consensus 255 ~v~V~a~~~~~~s-~~~~~~~~t 276 (361)
.|+++|....|.. ....+.+..
T Consensus 156 tl~a~A~D~aGn~s~s~~vtvtv 178 (190)
T 3pdd_A 156 EISVIAYDDDDAASTPDSVKIFV 178 (190)
T ss_dssp EEEEEEEETTCCBCCCEEEEEEE
T ss_pred EEEEEEEECCCCEEecceEEEEE
Confidence 9999999987754 333344444
|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* | Back alignment and structure |
|---|
Probab=87.84 E-value=1.6 Score=39.82 Aligned_cols=74 Identities=7% Similarity=0.033 Sum_probs=48.4
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEeecCCC-CceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENP-PAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~-~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.+|... .+.++|.|+|.... +..+. |.|.. + ........... . .....+|.+++.|.+.|+++.
T Consensus 26 ~~t~~~~l~~~-~~~~sv~l~W~a~s~~~g~~-y~v~~----~--g~~v~t~~~~~~~-~~~~~~l~~~~~Y~~~V~a~d 96 (584)
T 3arx_A 26 TTSGYNDMVKY-HELAKIKVKFNQWSGTSGDT-YNVYF----D--GVKVATGAITGSQ-TTASFEYGQGGLYQMEIEACD 96 (584)
T ss_dssp CCCCHHHHEEE-CSSEEEEEEEECCSSCCCSE-EEEEE----T--TEEEEEEECCTTE-EEEEEEECCCEEEEEEEEEEE
T ss_pred CCCChhhheec-ccCceEEEEEecccCCCCeE-EEEEE----C--CEEEEEecCCCCc-eeEEEeccCCceEEEEEEEEc
Confidence 46667777554 68899999999865 22345 88854 1 12222222221 1 233448999999999999999
Q ss_pred CCCCc
Q psy4956 167 DSKES 171 (361)
Q Consensus 167 ~~~~s 171 (361)
..|.+
T Consensus 97 ~~G~~ 101 (584)
T 3arx_A 97 ATGCS 101 (584)
T ss_dssp TTEEE
T ss_pred CCCcc
Confidence 77654
|
| >3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase, hydro hydrolase inhibitor complex; HET: POY; 1.16A {Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A* 3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A* 3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A* 3as3_A* | Back alignment and structure |
|---|
Probab=87.18 E-value=1.5 Score=39.95 Aligned_cols=75 Identities=13% Similarity=0.134 Sum_probs=47.8
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.|.+|.+|... .+..+|.|+|........+. |.|... +.. +..... .........+|.+++.|.++|.|+
T Consensus 26 ~~t~~~~l~~~-~~~~sv~l~W~a~s~~~g~~-y~v~~~---g~~---v~t~~~--~~~~~~~~~~l~~~~~Y~~~V~a~ 95 (584)
T 3arx_A 26 TTSGYNDMVKY-HELAKIKVKFNQWSGTSGDT-YNVYFD---GVK---VATGAI--TGSQTTASFEYGQGGLYQMEIEAC 95 (584)
T ss_dssp CCCCHHHHEEE-CSSEEEEEEEECCSSCCCSE-EEEEET---TEE---EEEEEC--CTTEEEEEEEECCCEEEEEEEEEE
T ss_pred CCCChhhheec-ccCceEEEEEecccCCCCeE-EEEEEC---CEE---EEEecC--CCCceeEEEeccCCceEEEEEEEE
Confidence 36667777554 78889999998765444455 888542 111 111110 000133445899999999999999
Q ss_pred eCCCC
Q psy4956 262 SEDEI 266 (361)
Q Consensus 262 ~~~~~ 266 (361)
+..|.
T Consensus 96 d~~G~ 100 (584)
T 3arx_A 96 DATGC 100 (584)
T ss_dssp ETTEE
T ss_pred cCCCc
Confidence 98775
|
| >4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=84.98 E-value=9.1 Score=27.76 Aligned_cols=87 Identities=14% Similarity=0.213 Sum_probs=54.2
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
|..| .+.+..++.++..+.|+|-.-...-..-.+-|+..-.. ...+. +-..+...++||.-.+.|.|++..+.
T Consensus 70 pesp-vlkivnvtqtscvlawdplklgsaklkslilyrkgirs---mvipn---pfkvtttkisglsvdtpyefqlklit 142 (290)
T 4gns_A 70 PESP-VLKIVNVTQTSCVLAWDPLKLGSAKLKSLILYRKGIRS---MVIPN---PFKVTTTKISGLSVDTPYEFQLKLIT 142 (290)
T ss_dssp CCCC-CEEEEEECSSCEEEEECCCCCSSSCEEEEEEESSSTTS---CBCSC---TTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCc-eEEEEeeccceEEEEeCccccchHHhhhhhhhhhccee---eecCC---CeeEEEEEecceecCCcceeEEEEEe
Confidence 5544 57888899999999999864322222333445443211 11111 23347788999999999999999998
Q ss_pred CCCCCCceEEEEec
Q psy4956 263 EDEISTPTTAQYRT 276 (361)
Q Consensus 263 ~~~~s~~~~~~~~t 276 (361)
..|.-....+..+|
T Consensus 143 tsgtlwsekvilrt 156 (290)
T 4gns_A 143 TSGTLWSEKVILRT 156 (290)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred ccCceehhheeeee
Confidence 76643333333333
|
| >4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=83.87 E-value=10 Score=27.48 Aligned_cols=69 Identities=17% Similarity=0.162 Sum_probs=44.3
Q ss_pred cceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 283 SFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 283 ~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
-+++ .+++.++..+.|++.+-.+.-..-.|-|+.+-.. .+.......+...+++ |.-.+.|.|.+.-+.
T Consensus 74 vlki--vnvtqtscvlawdplklgsaklkslilyrkgirs----mvipnpfkvtttkisg-lsvdtpyefqlklit 142 (290)
T 4gns_A 74 VLKI--VNVTQTSCVLAWDPLKLGSAKLKSLILYRKGIRS----MVIPNPFKVTTTKISG-LSVDTPYEFQLKLIT 142 (290)
T ss_dssp CEEE--EEECSSCEEEEECCCCCSSSCEEEEEEESSSTTS----CBCSCTTTCCEEEECS-CCTTCEEEEEEEEEE
T ss_pred eEEE--EeeccceEEEEeCccccchHHhhhhhhhhhccee----eecCCCeeEEEEEecc-eecCCcceeEEEEEe
Confidence 3455 7999999999999964322334444556544321 1222233445667775 999999999987654
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=83.15 E-value=14 Score=32.04 Aligned_cols=89 Identities=12% Similarity=0.069 Sum_probs=48.9
Q ss_pred CCCCcceEEEecc--CCeEEEEeecC-CCCCcceEEEEEEeCCCCCCceeEEee-------ccCCCCCcEEEecCCCCCC
Q psy4956 183 PNTPGKFIVWFRN--ETTLLVLWQPS-YPASIYTHYKVSIDPPDAPESVLYVEK-------EGEPPGPAQAAFKGLVPGR 252 (361)
Q Consensus 183 p~~p~~l~~~~~~--~~~~~v~W~~~-~~~~~~~~y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~L~p~t 252 (361)
+..|..+.+.... .+++.|.|... ...+. -.|+|....+......... .....-...+.+.+|+|++
T Consensus 22 ~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~---~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t 98 (426)
T 1xzw_A 22 YNAPQQVHITQGDYEGRGVIISWTTPYDKAGA---NKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDT 98 (426)
T ss_dssp TTCCEEEEEEECSSSSSCEEEEEEESSCCTTT---TEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTC
T ss_pred CCCCceEEEEECCCCCCeEEEEEEeCCCCCCC---CEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCC
Confidence 3567777776554 47899999654 22121 1345543332221111100 0012223567899999999
Q ss_pred eEEEEEEEEeCCCCCCceEEEEecCCC
Q psy4956 253 AYNISVQTVSEDEISTPTTAQYRTIPL 279 (361)
Q Consensus 253 ~Y~v~V~a~~~~~~s~~~~~~~~t~~~ 279 (361)
.|..+|.. + .......++|.|.
T Consensus 99 ~Y~Yrv~~----g-~~s~~~~f~T~p~ 120 (426)
T 1xzw_A 99 KYYYRLGF----G-DAKRQFWFVTPPK 120 (426)
T ss_dssp EEEEEECC----G-GGCEEEEEECCCC
T ss_pred EEEEEECC----C-CccceeEEECCCC
Confidence 99999965 2 1223456677664
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=82.84 E-value=4.3 Score=38.57 Aligned_cols=26 Identities=27% Similarity=0.400 Sum_probs=22.5
Q ss_pred cceEEecCCCCCceEEEEEEEecCCcC
Q psy4956 51 KDNIEFSEGLPGTKYDFYLYYTNSTVH 77 (361)
Q Consensus 51 ~~~~~i~~L~p~t~Y~i~V~a~~~~~~ 77 (361)
..+.++++|.||. |.|+|+|.+..+.
T Consensus 743 ~~~~~ytnL~pG~-Y~f~V~a~n~~g~ 768 (795)
T 4a2l_A 743 SRTVSYSNLPQGT-YQFLVKAANSDGK 768 (795)
T ss_dssp CCEEEEECCCSEE-EEEEEEEECTTSC
T ss_pred cCeEEecccCCCe-EEEEEEEECCCCc
Confidence 5789999999998 9999999887644
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=82.61 E-value=2.7 Score=39.68 Aligned_cols=26 Identities=15% Similarity=0.208 Sum_probs=21.9
Q ss_pred cceEEecCCCCCceEEEEEEEecCCcC
Q psy4956 51 KDNIEFSEGLPGTKYDFYLYYTNSTVH 77 (361)
Q Consensus 51 ~~~~~i~~L~p~t~Y~i~V~a~~~~~~ 77 (361)
..+.++++|.||+ |.|+|+|.+..|.
T Consensus 709 ~~~~~ytnL~pG~-Y~f~V~a~~~~g~ 734 (758)
T 3ott_A 709 INRITYSNLSYGN-YQLIISKLERDGQ 734 (758)
T ss_dssp CCEEEECSCCSEE-EEEEEEEBCTTSC
T ss_pred cceEEecCCCCcc-EEEEEEEeCCCCC
Confidence 4678999999998 9999999886644
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=82.34 E-value=9.1 Score=33.18 Aligned_cols=89 Identities=12% Similarity=0.075 Sum_probs=48.1
Q ss_pred CCCCcceEEEecc--CCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEee-------ccCCCCCcEEEecCCCCCCe
Q psy4956 183 PNTPGKFIVWFRN--ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEK-------EGEPPGPAQAAFKGLVPGRA 253 (361)
Q Consensus 183 p~~p~~l~~~~~~--~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~L~p~t~ 253 (361)
+..|..+.+.... .+++.|+|......+ .-.|+|....+......... .....-...+.+.+|+|++.
T Consensus 16 ~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~---~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 92 (424)
T 2qfp_A 16 YNAPQQVHITQGDLVGRAMIISWVTMDEPG---SSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTK 92 (424)
T ss_dssp TTCCEEEEEEECSSSSSCEEEEEEESSSCC---CCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCE
T ss_pred CCCCceEEEEecCCCCCeEEEEEECCCCCC---CCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCE
Confidence 3467777776543 368999996532211 12344443322111110000 01122235678999999999
Q ss_pred EEEEEEEEeCCCCCCceEEEEecCCC
Q psy4956 254 YNISVQTVSEDEISTPTTAQYRTIPL 279 (361)
Q Consensus 254 Y~v~V~a~~~~~~s~~~~~~~~t~~~ 279 (361)
|..+|..- + ......++|.|.
T Consensus 93 Y~Yrv~~~---~--~s~~~~f~T~p~ 113 (424)
T 2qfp_A 93 YYYEVGLR---N--TTRRFSFITPPQ 113 (424)
T ss_dssp EEEEECCS---S--SCEEEEEECCCC
T ss_pred EEEEECCC---C--ccceEEEECCCC
Confidence 99998652 2 224456677664
|
| >2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.00 E-value=2.1 Score=28.91 Aligned_cols=25 Identities=20% Similarity=0.308 Sum_probs=20.4
Q ss_pred cceEEecCCCCCceEEEEEEEecCCc
Q psy4956 51 KDNIEFSEGLPGTKYDFYLYYTNSTV 76 (361)
Q Consensus 51 ~~~~~i~~L~p~t~Y~i~V~a~~~~~ 76 (361)
.....|.+|.+|. |.|+|......+
T Consensus 69 ~~tlkLS~L~eG~-Y~FqltVtd~~~ 93 (113)
T 2e7m_A 69 KQTLNLSQLSVGL-YVFKVTVSSENA 93 (113)
T ss_dssp SSEEEECSCCSEE-EEECCEEEETTE
T ss_pred CCeeEecCcCcEE-EEEEEEEECCCC
Confidence 6899999999866 999998766553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 361 | ||||
| d1x5za1 | 102 | b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p | 5e-06 | |
| d1fnfa1 | 94 | b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m | 8e-05 | |
| d2dtge2 | 196 | b.1.2.1 (E:593-807) Insulin receptor {Human (Homo | 2e-04 | |
| d2dtge2 | 196 | b.1.2.1 (E:593-807) Insulin receptor {Human (Homo | 0.004 | |
| d1j8ka_ | 94 | b.1.2.1 (A:) Fibronectin, different Fn3 modules {H | 3e-04 | |
| d1wfoa1 | 117 | b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) | 6e-04 | |
| d1uena_ | 125 | b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens | 7e-04 | |
| d1x5ga1 | 103 | b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [ | 0.001 | |
| d1x3da1 | 105 | b.1.2.1 (A:8-112) Fibronectin type-III domain cont | 0.001 | |
| d1fnfa3 | 89 | b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m | 0.001 | |
| d1fnfa3 | 89 | b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m | 0.003 | |
| d1tdqa3 | 86 | b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic | 0.001 | |
| d1qr4a2 | 88 | b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu | 0.002 | |
| d1x5ya1 | 98 | b.1.2.1 (A:8-105) Myosin binding protein C, fast-t | 0.002 | |
| d1va9a1 | 109 | b.1.2.1 (A:8-116) Down syndrome cell adhesion mole | 0.002 | |
| d1x5ja1 | 100 | b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [ | 0.002 | |
| d1fnfa2 | 91 | b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m | 0.002 | |
| d1x5la1 | 98 | b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human | 0.002 | |
| d1qr4a1 | 87 | b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) | 0.003 | |
| d2cuma1 | 93 | b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) | 0.003 | |
| d1uema_ | 117 | b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens | 0.003 | |
| d1x4za1 | 108 | b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) { | 0.004 | |
| d1x5fa1 | 107 | b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [ | 0.004 |
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 5e-06
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 87 TTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG 146
T P P N S + + W+PP S + ++L RI T P
Sbjct: 8 TGVPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRI---TIEPGTS 64
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182
Y L+ L P Y +L + + + T
Sbjct: 65 YRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTM 100
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.1 bits (90), Expect = 8e-05
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Query: 89 PPDPPTNLSVNVRSGKTA-QIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
P PPTNL + + W + +G+++ + + + +
Sbjct: 1 PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSC 60
Query: 148 SLKDLTPGGSYQVQLFSVYDSKES 171
+ +L+PG Y V +++V D KES
Sbjct: 61 TFDNLSPGLEYNVSVYTVKDDKES 84
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (90), Expect = 2e-04
Identities = 22/190 (11%), Positives = 46/190 (24%), Gaps = 9/190 (4%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPA 145
T P P + S + W PP G + + + +E + + +
Sbjct: 1 TNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFELDYCLKGLK 60
Query: 146 G---YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVL 202
S + DS + + + E L +
Sbjct: 61 LPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNV 120
Query: 203 WQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262
P+ + + E + + + GL Y I +Q +
Sbjct: 121 VFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKE----SLVISGLRHFTGYRIELQACN 176
Query: 263 EDEISTPTTA 272
+D +
Sbjct: 177 QDTPEERCSV 186
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.6 bits (80), Expect = 0.004
Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 16/184 (8%)
Query: 181 TKPNTPGKFIVWFRNETTLLVLWQ-PSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPG 239
T P+ P I + + +++ W+ PS P THY V + ++ E
Sbjct: 1 TNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWER---------QAEDSELFE 51
Query: 240 PAQAAFKGLVPGRAYNISVQTVSEDEISTP-TTAQYRTIPLRPLSFTYDKASITSNSLRV 298
+P R ++ ++ + + P + + + +S R
Sbjct: 52 LDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRK 111
Query: 299 VWEPPKGFSEF-----DKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353
+E F K + +V G + + + + GL Y++
Sbjct: 112 TFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVISGLRHFTGYRIE 171
Query: 354 VKTV 357
++
Sbjct: 172 LQAC 175
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.1 bits (85), Expect = 3e-04
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
D P L+ + +I W P S E + + L+
Sbjct: 3 DRPKGLAFTDVDVDSIKIAWESPQ--GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQ 60
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183
L PG Y V + +++D ES T P
Sbjct: 61 GLRPGSEYTVSVVALHDDMESQPLIGTQSTAIP 93
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 6e-04
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG-- 146
P PP + + ++ W PP + ++ T P+
Sbjct: 20 VPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQ 79
Query: 147 YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182
Y+ L P Y ++ + A + TT+
Sbjct: 80 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 7e-04
Identities = 21/109 (19%), Positives = 31/109 (28%), Gaps = 10/109 (9%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSP--------PISGKYSGFKLKVISLSEKTPPRIIGF 139
P P N+ VNV + A++ W P + G + S
Sbjct: 13 LPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKI 72
Query: 140 TENPPAG--YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKPNTP 186
+ L L P Y + + V E A R F T +
Sbjct: 73 LTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSG 121
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.9 bits (82), Expect = 0.001
Identities = 16/100 (16%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
T P P NL S + + W P+SG +G + +
Sbjct: 4 TQPEVQLPGPAPNLRAYAASPTSITVTWETPVSG--NGEIQNYKLYYMEKGTDKEQDVDV 61
Query: 143 PPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182
Y++ L Y ++ + V+ T
Sbjct: 62 SSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 105 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.001
Identities = 13/94 (13%), Positives = 25/94 (26%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGY 147
PD P + R+ + + W P + K +
Sbjct: 9 CEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQF 68
Query: 148 SLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+ L+P + +L + D S + T
Sbjct: 69 KITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYT 102
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.6 bits (81), Expect = 0.001
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
D PT + + + + + W P +G++++ PR + +L
Sbjct: 2 DSPTGIDFSDITANSFTVHWIAP-RATITGYRIRHHPEHFSGRPRED-RVPHSRNSITLT 59
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
+LTPG Y V + ++ +ES + T
Sbjct: 60 NLTPGTEYVVSIVALNGREESPLLIGQQST 89
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.4 bits (78), Expect = 0.003
Identities = 17/91 (18%), Positives = 25/91 (27%), Gaps = 5/91 (5%)
Query: 186 PGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF 245
P + V W P + T Y++ P P
Sbjct: 4 PTGIDFSDITANSFTVHWIA--PRATITGYRIRHHPEHFSGRPREDRV---PHSRNSITL 58
Query: 246 KGLVPGRAYNISVQTVSEDEISTPTTAQYRT 276
L PG Y +S+ ++ E S Q T
Sbjct: 59 TNLTPGTEYVVSIVALNGREESPLLIGQQST 89
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 35.2 bits (80), Expect = 0.001
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
D P +L V S + + W+ I+ + + Y+L
Sbjct: 2 DSPRDLMVTASSETSISLIWTKASGPIDH----YRITFTPSSGISSEVTVPRDRTSYTLT 57
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNF 179
DL PG Y + + + ++S+ T F
Sbjct: 58 DLEPGAEYIISITAERGRQQSLESTVDAF 86
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 35.2 bits (80), Expect = 0.002
Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 4/90 (4%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
P +S + + +A + W+PP S S V + ++ L
Sbjct: 3 SPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTR---TKLVK 59
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
L PG Y V + SV +ES + T
Sbjct: 60 LVPGVDYNVNIISVKGFEESEPISG-ILKT 88
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Score = 35.3 bits (80), Expect = 0.002
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG-- 146
P P +L+V + T + W PP G ++ + + + P
Sbjct: 1 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCG 60
Query: 147 YSLKDLTPGGSYQVQLFSV 165
+++KDL G ++ V
Sbjct: 61 FTVKDLPTGARILFRVVGV 79
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.3 bits (80), Expect = 0.002
Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 11/107 (10%)
Query: 86 ITT----PPDPPTNLSVNVRSGKTAQIFWSPPISG-------KYSGFKLKVISLSEKTPP 134
I+T P PP ++++ + ++ Q+ W P Y + S
Sbjct: 1 ISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS 60
Query: 135 RIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
+ Y+L +L Y V + + + + + N TT
Sbjct: 61 IVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATT 107
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.0 bits (79), Expect = 0.002
Identities = 15/97 (15%), Positives = 27/97 (27%), Gaps = 4/97 (4%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG-- 146
P PP + ++ S T +I W+ K+
Sbjct: 1 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATT 60
Query: 147 --YSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTT 181
Y + L P Y+ + + S + + TT
Sbjct: 61 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTT 97
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.9 bits (79), Expect = 0.002
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD 151
PPT+L T ++ W+PP S + F ++ + + + L +
Sbjct: 3 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVLTN 61
Query: 152 LTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
L PG Y V + SVY+ ES R T
Sbjct: 62 LLPGTEYVVSVSSVYEQHESTPLRGRQKT 90
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.8 bits (79), Expect = 0.002
Identities = 9/94 (9%), Positives = 24/94 (25%)
Query: 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYS 148
P + + + W P + ++ + + + +
Sbjct: 3 APSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRAT 62
Query: 149 LKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182
+ L PG Y Q+ + + + T
Sbjct: 63 VSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 34.4 bits (78), Expect = 0.003
Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLK 150
D P +L V+ + T + W P++ ++ + + + L+
Sbjct: 1 DNPKDLEVSDPTETTLSLRWRRPVAKFDR----YRLTYVSPSGKKNEMEIPVDSTSFILR 56
Query: 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFT 180
L G Y + L + +S T + T
Sbjct: 57 GLDAGTEYTISLVAEKGRHKSKPTTIKGST 86
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.4 bits (78), Expect = 0.003
Identities = 18/97 (18%), Positives = 26/97 (26%), Gaps = 7/97 (7%)
Query: 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQA 243
P T L+ W E +L P G
Sbjct: 3 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQEILL-------PGGITSH 55
Query: 244 AFKGLVPGRAYNISVQTVSEDEISTPTTAQYRTIPLR 280
GL P +YN +Q + + P + + T LR
Sbjct: 56 QLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLR 92
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.9 bits (79), Expect = 0.003
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 2/106 (1%)
Query: 83 TASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTEN 142
++ P PP+ V + + + W P G + + S+ +
Sbjct: 9 NYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH 68
Query: 143 PPA-GYSLKDLTPGGSYQVQLFSVYDSKESV-AYTSRNFTTKPNTP 186
Y+++ L P Y + ++ S + S T+ + P
Sbjct: 69 VKTTLYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDSGP 114
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 34.7 bits (79), Expect = 0.004
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAG- 146
+PP+ P +++ S + + W P +G + +V K I T P
Sbjct: 9 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSR 68
Query: 147 --YSLKDLTPGGSYQVQLFSV 165
+ L G SY+ ++ ++
Sbjct: 69 LSVEITGLEKGISYKFRVRAL 89
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.5 bits (78), Expect = 0.004
Identities = 13/102 (12%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK--TPPRIIGFTE 141
A+ P P ++ ++ S + ++ W P S + + +++ R+ +
Sbjct: 5 ATTGPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSH 64
Query: 142 NPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSRNFTTKP 183
++++L P Y ++ + + T+P
Sbjct: 65 PGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 99.64 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 99.58 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 99.57 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 99.56 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.56 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.55 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.54 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.53 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 99.52 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.51 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.51 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.5 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.5 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 99.5 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.5 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.5 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 99.5 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 99.49 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 99.49 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.49 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 99.49 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 99.49 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.48 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.48 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.48 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.47 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 99.47 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.47 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.46 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 99.46 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 99.46 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 99.46 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.45 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 99.45 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 99.45 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.45 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.44 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.44 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.44 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.43 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.43 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 99.43 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.43 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.43 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 99.42 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 99.41 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.41 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 99.41 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 99.4 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.39 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 99.39 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.39 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.39 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.38 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.38 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 99.38 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 99.37 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 99.36 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 99.36 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 99.36 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 99.36 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.36 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.35 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 99.35 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 99.35 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 99.35 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 99.34 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 99.34 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.34 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 99.34 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 99.34 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 99.33 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 99.33 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 99.32 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 99.31 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 99.31 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 99.31 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 99.3 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 99.3 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 99.3 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 99.3 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 99.29 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 99.29 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 99.29 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 99.29 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.29 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 99.29 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 99.28 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 99.28 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 99.27 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.27 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 99.27 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 99.26 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 99.26 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 99.26 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.26 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 99.26 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.26 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 99.25 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 99.25 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 99.24 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 99.22 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.22 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 99.22 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 99.22 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 99.21 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 99.2 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 99.19 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 99.19 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 99.19 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 99.18 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 99.18 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.18 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 99.18 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 99.17 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 99.15 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 99.15 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 99.15 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.14 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 99.14 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 99.13 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 99.13 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 99.12 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 99.12 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 99.12 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 99.11 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 99.11 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 99.11 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 99.11 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 99.11 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 99.11 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 99.11 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 99.11 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 99.1 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 99.09 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 99.09 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 99.07 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 99.07 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 99.07 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 99.06 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 99.05 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 99.04 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 99.04 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 99.02 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 99.01 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 99.01 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 98.99 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 98.98 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 98.97 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 98.96 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 98.96 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 98.95 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 98.94 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 98.94 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 98.93 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 98.92 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 98.92 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 98.87 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 98.83 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 98.83 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 98.78 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 98.73 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 98.71 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 98.7 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 98.67 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 98.62 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 98.57 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 98.51 | |
| d2hyma1 | 109 | Interferon-alpha/beta receptor beta chain {Human ( | 97.63 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 96.96 | |
| d1f6fb1 | 96 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.82 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 96.64 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 96.59 | |
| d2hyma1 | 109 | Interferon-alpha/beta receptor beta chain {Human ( | 96.48 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 96.24 | |
| d2hfta1 | 106 | Extracellular region of human tissue factor {Human | 96.05 | |
| d1a21a1 | 103 | Extracellular region of human tissue factor {Rabbi | 96.0 | |
| d2c4fu1 | 116 | Extracellular region of human tissue factor {Human | 95.27 | |
| d2hfta1 | 106 | Extracellular region of human tissue factor {Human | 94.89 | |
| d2c4fu1 | 116 | Extracellular region of human tissue factor {Human | 94.65 | |
| d1f6fb1 | 96 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 94.44 | |
| d1a21a1 | 103 | Extracellular region of human tissue factor {Rabbi | 93.63 | |
| d1axib1 | 99 | Growth hormone receptor {Human (Homo sapiens) [Tax | 90.66 | |
| d2gysa3 | 99 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 86.26 |
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=9.2e-16 Score=105.28 Aligned_cols=101 Identities=17% Similarity=0.322 Sum_probs=85.7
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
|.+|.+|.+...+.+++.|+|+++ .+.+.+|.|.|...++........ ...+.+.|.+|.|++.|.|+|+|++
T Consensus 1 P~~P~~l~~~~~t~~si~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~l~~L~p~t~Y~~~V~a~~ 73 (102)
T d2cuha1 1 PDGPTQLRALNLTEGFAVLHWKPP--QNPVDTYDIQVTAPGAPPLQAETP-----GSAVDYPLHDLVLHTNYTATVRGLR 73 (102)
T ss_dssp CSSCEEEECCCCSSSCEEEEEECC--SSCCSEEEEEEECSSSCCEEEEEE-----TTCSEEEECSCCSSSEEEEEEEEEE
T ss_pred CcCCCccEEEEeCCCEEEEEEEee--eccceeeEEEEEeccccceeeeee-----eeeeeEEEccEEeeEEEEEEEEEEe
Confidence 678999999999999999999987 467899999999876655444433 2358999999999999999999999
Q ss_pred CCCCCCceEEEEecCCCCCccceEEeeecC
Q psy4956 263 EDEISTPTTAQYRTIPLRPLSFTYDKASIT 292 (361)
Q Consensus 263 ~~~~s~~~~~~~~t~~~~p~~l~~~~~~~~ 292 (361)
+.+.+.+....+.|.+.+|.+|.+ ..++
T Consensus 74 ~~~~s~~~~~~~~T~~~~P~~l~~--~~vt 101 (102)
T d2cuha1 74 GPNLTSPASITFTTGLEAPRDLEA--KEVT 101 (102)
T ss_dssp TTEECCCEEEEEESCCCCTTTSSS--CCCC
T ss_pred CCCCcCCEEEEEECCCCCCCCCEe--ecCC
Confidence 999999998899999999999888 5443
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=4e-15 Score=101.98 Aligned_cols=100 Identities=22% Similarity=0.326 Sum_probs=82.6
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
|.+|.+|.+..++.+++.|+|++| .+.+.+|+|.|+..+ .......+..... ++.|.+|.|++.|.|+|+|.++.+
T Consensus 1 P~~P~~l~~~~~t~~si~l~W~~p-~~~i~~Y~v~~~~~~--~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~a~~~~~ 76 (102)
T d2cuha1 1 PDGPTQLRALNLTEGFAVLHWKPP-QNPVDTYDIQVTAPG--APPLQAETPGSAV-DYPLHDLVLHTNYTATVRGLRGPN 76 (102)
T ss_dssp CSSCEEEECCCCSSSCEEEEEECC-SSCCSEEEEEEECSS--SCCEEEEEETTCS-EEEECSCCSSSEEEEEEEEEETTE
T ss_pred CcCCCccEEEEeCCCEEEEEEEee-eccceeeEEEEEecc--ccceeeeeeeeee-eEEEccEEeeEEEEEEEEEEeCCC
Confidence 678999999999999999999997 477899999998754 3445556667777 999999999999999999999988
Q ss_pred CcccceeeeeccCCCCCcceEEEec
Q psy4956 170 ESVAYTSRNFTTKPNTPGKFIVWFR 194 (361)
Q Consensus 170 ~s~~~~~~~~~t~p~~p~~l~~~~~ 194 (361)
.+.+ ....++|.+.+|.+|.+..+
T Consensus 77 ~s~~-~~~~~~T~~~~P~~l~~~~v 100 (102)
T d2cuha1 77 LTSP-ASITFTTGLEAPRDLEAKEV 100 (102)
T ss_dssp ECCC-EEEEEESCCCCTTTSSSCCC
T ss_pred CcCC-EEEEEECCCCCCCCCEeecC
Confidence 8866 45667788888888766543
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=4e-15 Score=115.09 Aligned_cols=179 Identities=14% Similarity=0.057 Sum_probs=77.4
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
|.|.+|.++.+...+.+++.|+|++|. +|.+.+|.|+|+........ .... ......|.+.+.|.+++.+.
T Consensus 1 T~Ps~P~~~~~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~------~~~~-~~~~~~~~~~~~y~~~v~~~ 73 (196)
T d2dtge2 1 TNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSEL------FELD-YCLKGLKLPSRTWSPPFESE 73 (196)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSC------TTCS-SSCSCCCCCC----------
T ss_pred CcCcCCcCCEEEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCce------eEEe-eEEeccccceeEEEEEEEEE
Confidence 568999999999999999999999987 46789999999875433221 1111 23334577889999999998
Q ss_pred eCCCCcccceeeeeccC----------CCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeec
Q psy4956 166 YDSKESVAYTSRNFTTK----------PNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKE 234 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~----------p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~ 234 (361)
+..+.+........... +..+..+.+.......+.+.|..+... .....|.+.+.............
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 151 (196)
T d2dtge2 74 DSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKV-- 151 (196)
T ss_dssp ----------------------------------------------------------------------CCSCSCEE--
T ss_pred cCCccccCcCCccceecCCCCccccccccCCcCcEEEeccCCceeecccCcCCCccceEEEEEEeecCCCccEEEEec--
Confidence 76655432222222111 112223334444445566666544211 11222222222222222211122
Q ss_pred cCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCc----eEEEEecCC
Q psy4956 235 GEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTP----TTAQYRTIP 278 (361)
Q Consensus 235 ~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~----~~~~~~t~~ 278 (361)
....++.|.+|.|++.|.|+|+|+|..|.+.+ ..+.++|.|
T Consensus 152 ---~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 152 ---VNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp ---CSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred ---cceEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 23478999999999999999999998776643 345566654
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=3.1e-14 Score=94.97 Aligned_cols=88 Identities=27% Similarity=0.375 Sum_probs=76.1
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+++|.+|.+...+.+++.|+|++| .+.+.+|+|.|+..++........+....+ .+.|.+|.|++.|.|+|.|.++.+
T Consensus 2 ld~P~~l~v~~~s~~s~~l~W~~p-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g 79 (90)
T d1tena_ 2 LDAPSQIEVKDVTDTTALITWFKP-LAEIDGIELTYGIKDVPGDRTTIDLTEDEN-QYSIGNLKPDTEYEVSLISRRGDM 79 (90)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECC-SSCCSEEEEEEEETTCTTCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCCCCCcEEEEecCCEEEEEEEeC-ceEeccEEEEEEEcCCCceeEEEEecCCcc-eeeEeeecCCCEEEEEEEEEeCCC
Confidence 688999999999999999999987 478899999999877666677777888887 999999999999999999999999
Q ss_pred Ccccceeeeec
Q psy4956 170 ESVAYTSRNFT 180 (361)
Q Consensus 170 ~s~~~~~~~~~ 180 (361)
.+.+. ...++
T Consensus 80 ~s~~~-~~~~~ 89 (90)
T d1tena_ 80 SSNPA-KETFT 89 (90)
T ss_dssp ECCCE-EEEEE
T ss_pred EeCCE-EEEEE
Confidence 88763 34443
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=3.3e-14 Score=94.64 Aligned_cols=82 Identities=21% Similarity=0.401 Sum_probs=73.3
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~ 170 (361)
++|.+|.+..++.+++.|+|++| .+.+.+|+|.|+..++..+.....+....+ ++.|.+|.|++.|.|+|.|.+..|.
T Consensus 2 d~P~~l~v~~vt~~sv~l~W~~p-~~~~~~Y~i~~~~~~~~~~~~~~~v~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g~ 79 (89)
T d1fnfa3 2 DSPTGIDFSDITANSFTVHWIAP-RATITGYRIRHHPEHFSGRPREDRVPHSRN-SITLTNLTPGTEYVVSIVALNGREE 79 (89)
T ss_dssp CCCEEEEEESCCSSEEEEEEECC-SSCCSEEEEEEECSCCSSCCEEEEEETTCC-EEEEESCCTTCEEEEEEEEEETTEE
T ss_pred ccCcCCEEEEecCCEEEEEEEeC-CCEEeeEEEEEEECCCCCceEEEEECCCcc-EEEECCCcccCEEEEEEEEEcCCcC
Confidence 68999999999999999999997 477899999999877666777778888887 9999999999999999999999998
Q ss_pred cccc
Q psy4956 171 SVAY 174 (361)
Q Consensus 171 s~~~ 174 (361)
|.+.
T Consensus 80 s~p~ 83 (89)
T d1fnfa3 80 SPLL 83 (89)
T ss_dssp CCCE
T ss_pred cCCE
Confidence 8763
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=3.1e-14 Score=94.71 Aligned_cols=88 Identities=22% Similarity=0.308 Sum_probs=73.1
Q ss_pred CCCccEEEEEe--CCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 92 PPTNLSVNVRS--GKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 92 ~p~~l~~~~~~--~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
+|.++.+...+ .+++.|+|++|..+.+.+|+|+|+..++....++..++.... .+.|.+|.|++.|.|+|.|.+..|
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~~~v~~~~~-~~~l~gL~P~t~Y~v~v~av~~~G 80 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATIPGHLN-SYTIKGLKPGVVYEGQLISIQQYG 80 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEEECSSCC-EEEECSCCSSEEEEEEEEEEESSS
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeeeeccCCCcc-EEEECCcccCcEEEEEEEEEeCCC
Confidence 57777776654 479999999987678999999999987666677788888888 999999999999999999999999
Q ss_pred Ccccceeeeecc
Q psy4956 170 ESVAYTSRNFTT 181 (361)
Q Consensus 170 ~s~~~~~~~~~t 181 (361)
.+.. ....++|
T Consensus 81 ~s~~-~~~~~tT 91 (93)
T d1owwa_ 81 HQEV-TRFDFTT 91 (93)
T ss_dssp CEEE-EEEEEEE
T ss_pred ccCc-EEEEEEe
Confidence 9876 3455554
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=6.6e-14 Score=93.64 Aligned_cols=81 Identities=26% Similarity=0.467 Sum_probs=72.6
Q ss_pred CCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCc
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s 171 (361)
||.+|.+...+.+++.|+|++|.++.+.+|.|+|+..++........+....+ .+.|.+|.|++.|.|+|+|.+..+.|
T Consensus 3 pP~~l~~~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g~S 81 (91)
T d1fnfa2 3 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDN-AVVLTNLLPGTEYVVSVSSVYEQHES 81 (91)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEEEECTTCC-EEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred cCCceEEEEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEEEEeCCCce-EEEEeceeCCCEEEEEEEEEcCCCCC
Confidence 68999999999999999999987778899999999887666677777777777 99999999999999999999999988
Q ss_pred cc
Q psy4956 172 VA 173 (361)
Q Consensus 172 ~~ 173 (361)
.+
T Consensus 82 ~p 83 (91)
T d1fnfa2 82 TP 83 (91)
T ss_dssp CC
T ss_pred CC
Confidence 76
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=5.8e-14 Score=94.72 Aligned_cols=84 Identities=20% Similarity=0.305 Sum_probs=72.2
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
..+|.+|.+...+.+++.|+|++|..+.+.+|+|+|+..+...+.....+....+ ++.|.+|.|++.|.|+|+|.+..|
T Consensus 6 vp~P~~l~v~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~t-~~~i~~L~p~t~Y~~~V~a~~~~g 84 (95)
T d2fnba_ 6 VPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSVG-YYTVTGLEPGIDYDISVITLINGG 84 (95)
T ss_dssp SCCCTTCEEECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEEEECCSSCS-EEEECCCCTTSEEEEEEEEEETTE
T ss_pred cCcCCCeEEEEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceEEEEEeCCCCe-EEEEecccCCEEEEEEEEEEeCCc
Confidence 3478999999999999999999987667899999999876655556666666676 999999999999999999999999
Q ss_pred Ccccc
Q psy4956 170 ESVAY 174 (361)
Q Consensus 170 ~s~~~ 174 (361)
.|.+.
T Consensus 85 ~s~p~ 89 (95)
T d2fnba_ 85 ESAPT 89 (95)
T ss_dssp ECCCC
T ss_pred EeCCE
Confidence 88764
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.52 E-value=1.1e-13 Score=91.51 Aligned_cols=86 Identities=24% Similarity=0.405 Sum_probs=72.3
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
++|.+|.+...+.+++.|+|+++ .+.+.+|.|.|...+.......+ ....+.+.|.+|.|++.|.|+|.|+++
T Consensus 1 DaP~~l~v~~~t~~sv~v~W~~p--~~~~~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 73 (87)
T d1qr4a1 1 DNPKDLEVSDPTETTLSLRWRRP--VAKFDRYRLTYVSPSGKKNEMEI-----PVDSTSFILRGLDAGTEYTISLVAEKG 73 (87)
T ss_dssp CCCEEEEEESCCSSEEEEEEECC--SSCCSEEEEEEECTTCCEEEEEE-----CTTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred CcCcCcEEEEecCCEEEEEEECC--CCCcceeEEEeecCCcceeEEeC-----CCCcCEEEECCCCcCCEEEEEEEEEcC
Confidence 47999999999999999999987 46789999999987655443333 334589999999999999999999999
Q ss_pred CCCCCceEEEEec
Q psy4956 264 DEISTPTTAQYRT 276 (361)
Q Consensus 264 ~~~s~~~~~~~~t 276 (361)
.+.+.+..+.+.|
T Consensus 74 ~~~s~~~~~~~~T 86 (87)
T d1qr4a1 74 RHKSKPTTIKGST 86 (87)
T ss_dssp SCBCCCEEEEEEC
T ss_pred CCCccCEEEEEEc
Confidence 9999998877765
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=2.5e-13 Score=91.05 Aligned_cols=90 Identities=30% Similarity=0.388 Sum_probs=77.8
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.+++|.++.+...+.+++.|+|.+| .+.+.+|.|.|+..+...+.....+....+ .+.|.+|.|++.|.|+|+|.++.
T Consensus 3 v~~~P~~l~v~~v~~~si~v~W~~p-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~v~V~a~~~~ 80 (93)
T d1tdqa1 3 VIDGPTQILVRDVSDTVAFVEWTPP-RAKVDFILLKYGLVGGEGGKTTFRLQPPLS-QYSVQALRPGSRYEVSISAVRGT 80 (93)
T ss_dssp SSCCCEEEEEEEECSSCEEEEEECC-SSCCSEEEEEEEESSSSCCCEEEEECTTCS-EEEECSCCTTCEEEEEEEEEETT
T ss_pred cCCcCCCCEEEEeCCCEEEEEEEcc-ccCCCceEEEEEeccCcceeeEEEeCCCce-EEEEeCcccceEEEEEEEEEeCC
Confidence 4678999999999999999999987 578899999999987766777777888877 99999999999999999999999
Q ss_pred CCcccceeeeecc
Q psy4956 169 KESVAYTSRNFTT 181 (361)
Q Consensus 169 ~~s~~~~~~~~~t 181 (361)
+.+.+ ....++|
T Consensus 81 g~s~~-~~~~~tT 92 (93)
T d1tdqa1 81 NESDA-SSTQFTT 92 (93)
T ss_dssp EECCC-EEEEEEC
T ss_pred CCcCC-EEEEEEC
Confidence 98876 3445554
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=4.5e-14 Score=94.01 Aligned_cols=81 Identities=17% Similarity=0.370 Sum_probs=67.4
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~ 170 (361)
++|.+|++...+.+++.|+|++| .+.+.+|.|+|+..++..+.....+....+ .+.|.+|.|++.|.|+|+|.+..+.
T Consensus 2 daP~nl~v~~~~~~s~~l~W~~p-~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~p~t~Y~~~V~a~n~~g~ 79 (89)
T d1fnha3 2 DAPSNLRFLATTPNSLLVSWQPP-RARITGYIIKYEKPGSPPREVVPRPRPGVT-EATITGLEPGTEYTIYVIALKNNQK 79 (89)
T ss_dssp CCCEEEEEEEEETTEEEEEEECC-SSCCSEEEEEEECTTSCCEECTTCCCTTCC-EEEEESCCTTCEEEEEEEEESSSCE
T ss_pred ccCcCCEEEEecCCEEEEEEeCC-CcCCceEEEEEeeccCCccEEEEEcCCCcc-EEEEEeeeCCCEEEEEEEEEcCCCE
Confidence 68999999999999999999997 478999999998765433333334445555 8999999999999999999999998
Q ss_pred ccc
Q psy4956 171 SVA 173 (361)
Q Consensus 171 s~~ 173 (361)
|.+
T Consensus 80 S~p 82 (89)
T d1fnha3 80 SEP 82 (89)
T ss_dssp EEE
T ss_pred eCC
Confidence 876
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.6e-13 Score=94.63 Aligned_cols=95 Identities=12% Similarity=0.198 Sum_probs=77.5
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..|.+|.++.+...+.+++.|+|.+|. ++.+.+|.|.|+..+...+........... .+.|.+|.|++.|.|+|+|
T Consensus 9 ~~P~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~p~t~Y~~rV~A 87 (107)
T d1x5fa1 9 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEM-QVTIQNLMPATVYIFRVMA 87 (107)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEECSSTTCS-EEEECSCCTTCEEEEEEEE
T ss_pred CCCcCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEEeCCCcc-EEEecCCCCCCEEEEEEEE
Confidence 457889999999999999999999875 456889999998876555555555555555 9999999999999999999
Q ss_pred EeCCCCcccceeeeeccCC
Q psy4956 165 VYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t~p 183 (361)
.+..|.|..+....++|.|
T Consensus 88 ~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 88 QNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp ECSSCEEEECCCEEEECCC
T ss_pred EeCCCCcCCCCCEEEECCC
Confidence 9999988766666666654
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=1.9e-13 Score=91.58 Aligned_cols=90 Identities=23% Similarity=0.321 Sum_probs=73.4
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
++|.+|.+...+.+++.|+|+++ .+.+.+|.|.|....+........ .......+.+.|.+|.|++.|.|+|.|++.
T Consensus 2 daP~~l~v~~~~~~sv~v~W~~p--~~~~~~y~v~y~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 78 (92)
T d1tdqa2 2 DAPKNLRVGSRTATSLDLEWDNS--EAEAQEYKVVYSTLAGEQYHEVLV-PKGIGPTTKTTLTDLVPGTEYGVGISAVMN 78 (92)
T ss_dssp CCCEEEEEEEECSSCEEEEEECC--SSCCSEEEEEEEETTCCCCEEEEE-ECCSSSEEEEEECSCCTTCEEEEEEEEEET
T ss_pred ccCcCCEEEEecCCEEEEEEEec--CCcccceEEEEEEcCCCcceeeEE-EecCCCeeEEEECCccCCCEEEEEEEEEeC
Confidence 47899999999999999999987 467899999999776544333221 122445678999999999999999999999
Q ss_pred CCCCCceEEEEec
Q psy4956 264 DEISTPTTAQYRT 276 (361)
Q Consensus 264 ~~~s~~~~~~~~t 276 (361)
.|.|.+..+.++|
T Consensus 79 ~g~s~p~~~~~~T 91 (92)
T d1tdqa2 79 SKQSIPATMNART 91 (92)
T ss_dssp TEECCCEEEEEEC
T ss_pred CCEecCEEEEEEC
Confidence 9999998888776
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.8e-13 Score=91.17 Aligned_cols=89 Identities=19% Similarity=0.278 Sum_probs=72.4
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
+++|.+|.+...+.+++.|.|+++ .+.+.+|.|.|...++......... +...+.+.|.+|.|++.|.|+|.|++
T Consensus 2 ld~P~~l~v~~~s~~s~~l~W~~p--~~~~~~y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~a~~ 76 (90)
T d1tena_ 2 LDAPSQIEVKDVTDTTALITWFKP--LAEIDGIELTYGIKDVPGDRTTIDL---TEDENQYSIGNLKPDTEYEVSLISRR 76 (90)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECC--SSCCSEEEEEEEETTCTTCCEEEEE---ETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCCcEEEEecCCEEEEEEEeC--ceEeccEEEEEEEcCCCceeEEEEe---cCCcceeeEeeecCCCEEEEEEEEEe
Confidence 578999999999999999999987 4678999999987765443322221 33458999999999999999999999
Q ss_pred CCCCCCceEEEEec
Q psy4956 263 EDEISTPTTAQYRT 276 (361)
Q Consensus 263 ~~~~s~~~~~~~~t 276 (361)
+.|.+.+....+.|
T Consensus 77 ~~g~s~~~~~~~~T 90 (90)
T d1tena_ 77 GDMSSNPAKETFTT 90 (90)
T ss_dssp TTEECCCEEEEEEC
T ss_pred CCCEeCCEEEEEEC
Confidence 99999888766554
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.1e-13 Score=93.14 Aligned_cols=89 Identities=21% Similarity=0.316 Sum_probs=70.7
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
.++|.+|++..++.+++.|+|++| .+.+.+|++.|+...+........+....+ ++.|.+|.|++.|.|+|.|.+..+
T Consensus 2 ~d~P~~l~v~~vt~~sv~l~W~~p-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g 79 (94)
T d1j8ka_ 2 IDRPKGLAFTDVDVDSIKIAWESP-QGQVSRYRVTYSSPEDGIHELFPAPDGEED-TAELQGLRPGSEYTVSVVALHDDM 79 (94)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCC-SSCCSCEEEEEEETTTEEEEECCCCCSSCC-EEEECSCCCCSEEEEEEEECSSSC
T ss_pred CCCCCCCEEEEecCCEEEEEEeCC-CccccceEEEEEeecCCCceEEEecCCCcc-EEEECCCCCCCEEEEEEEEEeCCC
Confidence 478999999999999999999997 467899999998865433333334444555 999999999999999999999999
Q ss_pred Ccccceeeeec
Q psy4956 170 ESVAYTSRNFT 180 (361)
Q Consensus 170 ~s~~~~~~~~~ 180 (361)
.|.+......+
T Consensus 80 ~S~p~~~~~~T 90 (94)
T d1j8ka_ 80 ESQPLIGTQST 90 (94)
T ss_dssp CCCCEEEEEEC
T ss_pred CcCCEEEEEEE
Confidence 88774443333
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=2.3e-13 Score=90.48 Aligned_cols=88 Identities=18% Similarity=0.241 Sum_probs=71.4
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
++|.+|.+...+.+++.|+|+++ .+.+.+|+|.|...+.......... +...+.+.|.+|.|++.|.|+|.|+++
T Consensus 2 d~P~~l~v~~vt~~sv~l~W~~p--~~~~~~Y~i~~~~~~~~~~~~~~~v---~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 76 (89)
T d1fnfa3 2 DSPTGIDFSDITANSFTVHWIAP--RATITGYRIRHHPEHFSGRPREDRV---PHSRNSITLTNLTPGTEYVVSIVALNG 76 (89)
T ss_dssp CCCEEEEEESCCSSEEEEEEECC--SSCCSEEEEEEECSCCSSCCEEEEE---ETTCCEEEEESCCTTCEEEEEEEEEET
T ss_pred ccCcCCEEEEecCCEEEEEEEeC--CCEEeeEEEEEEECCCCCceEEEEE---CCCccEEEECCCcccCEEEEEEEEEcC
Confidence 57999999999999999999987 4678999999998765443322221 334589999999999999999999999
Q ss_pred CCCCCceEEEEec
Q psy4956 264 DEISTPTTAQYRT 276 (361)
Q Consensus 264 ~~~s~~~~~~~~t 276 (361)
.|.|.+......|
T Consensus 77 ~g~s~p~~~~~~T 89 (89)
T d1fnfa3 77 REESPLLIGQQST 89 (89)
T ss_dssp TEECCCEEEEEEC
T ss_pred CcCcCCEEEEEEC
Confidence 9999888766543
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=2.8e-13 Score=90.74 Aligned_cols=91 Identities=18% Similarity=0.120 Sum_probs=73.8
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
|.+|.++.+...+.+++.|.|+++... +.+.+|.|.|+..++........ ....+++.+.+|.|++.|.|+|.|.
T Consensus 1 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~A~ 76 (93)
T d2vkwa2 1 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIRL----PSGSDHVMLKSLDWNAEYEVYVVAE 76 (93)
T ss_dssp CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEEE----CTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeeec----cCCceEEEEeccccceEEEEEEEEE
Confidence 678999999999999999999987533 56899999998876543322111 3345889999999999999999999
Q ss_pred eCCCCCCceEEEEecC
Q psy4956 262 SEDEISTPTTAQYRTI 277 (361)
Q Consensus 262 ~~~~~s~~~~~~~~t~ 277 (361)
|..|.|.++.+.++|.
T Consensus 77 N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 77 NQQGKSKAAHFVFRTA 92 (93)
T ss_dssp ETTEECCCEEEEEECC
T ss_pred cCCCCcCCEeEEEEec
Confidence 9999999988877763
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.7e-13 Score=90.90 Aligned_cols=89 Identities=19% Similarity=0.326 Sum_probs=73.8
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
.++|.++.+...+.+++.|+|+++ .+.+.+|.|.|...++....... ....+++.|.+|.|++.|.|+|.|++
T Consensus 2 l~~P~~l~~~~~~~~sv~l~W~~p--~~~~~~Y~v~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~t~Y~~~V~a~~ 74 (93)
T d2cuma1 2 LEAPRDLEAKEVTPRTALLTWTEP--PVRPAGYLLSFHTPGGQTQEILL-----PGGITSHQLLGLFPSTSYNARLQAMW 74 (93)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECC--SSCCSEEEEEEECTTSCEEEEEE-----CSSCSEEEECSCCTTCEEEEEEEEEB
T ss_pred cCcCCCCEEEEeCCCEEEEEEEcc--ccccccEEEEEEccccccEEEEE-----CCCccEEEEeCccCCCEEEEEEEEEe
Confidence 357999999999999999999987 46789999999987654333322 34458999999999999999999999
Q ss_pred CCCCCCceEEEEecCC
Q psy4956 263 EDEISTPTTAQYRTIP 278 (361)
Q Consensus 263 ~~~~s~~~~~~~~t~~ 278 (361)
+.|.+.+....+.|..
T Consensus 75 ~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 75 GQSLLPPVSTSFTTGG 90 (93)
T ss_dssp TTBCCCCEEEEEECCC
T ss_pred CCCCCCCEEEEEEeCC
Confidence 9999998888777754
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.49 E-value=6.7e-14 Score=94.73 Aligned_cols=85 Identities=20% Similarity=0.298 Sum_probs=68.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC---CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS---GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~---~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
+|.+|.++.+...+.+++.|+|++|.. +.+.+|.|+|+..+...|..........+ .+++.+|.+++.|.|+|+|.
T Consensus 1 PP~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~~~~~~~~-~~~v~~L~~~~~Y~frV~A~ 79 (98)
T d1x5ya1 1 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERC-GFTVKDLPTGARILFRVVGV 79 (98)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSS-EEEEECCCTTCCEEEEEEEE
T ss_pred CCCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEeeeecCcee-EEEECCCcCCeEEEEEEEEE
Confidence 478899999999999999999998762 35899999999876655544333334445 89999999999999999999
Q ss_pred eCCCCcccc
Q psy4956 166 YDSKESVAY 174 (361)
Q Consensus 166 ~~~~~s~~~ 174 (361)
+..|.|.++
T Consensus 80 n~~G~s~~s 88 (98)
T d1x5ya1 80 NIAGRSEPA 88 (98)
T ss_dssp ETTEECCCC
T ss_pred CCCcCCCCc
Confidence 999888653
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.49 E-value=2.5e-13 Score=89.50 Aligned_cols=84 Identities=21% Similarity=0.417 Sum_probs=71.1
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
++|.++.+...+.+++.|+|+++ .+.+++|.|+|...++......... ..+.+.|.+|.|++.|.|+|.|.++
T Consensus 2 ~~P~nl~v~~~~~~s~~l~W~~p--~~~~~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~~~~L~p~t~Y~v~V~a~~~ 74 (86)
T d1tdqa3 2 DSPRDLMVTASSETSISLIWTKA--SGPIDHYRITFTPSSGISSEVTVPR-----DRTSYTLTDLEPGAEYIISITAERG 74 (86)
T ss_dssp CCCEEEEEEEECSSCEEEEEECC--CSCCSEEEEEEECSSSCCEEEEEES-----SCSEEEECCCCTTCCEEEEEEEEET
T ss_pred ccCCCCEEEEecCCEEEEEEeCC--CCCccceEEEEecccccceEEEeCC-----CccEEEECCCccccEEEEEEEEEcC
Confidence 57999999999999999999987 5678999999998776555444432 3589999999999999999999999
Q ss_pred CCCCCceEEEE
Q psy4956 264 DEISTPTTAQY 274 (361)
Q Consensus 264 ~~~s~~~~~~~ 274 (361)
.+.+.+..+.+
T Consensus 75 ~~~s~p~~~~a 85 (86)
T d1tdqa3 75 RQQSLESTVDA 85 (86)
T ss_dssp TEECCCEEEEE
T ss_pred CCEECCEEeec
Confidence 99998887654
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=7.4e-14 Score=98.04 Aligned_cols=102 Identities=16% Similarity=0.239 Sum_probs=76.1
Q ss_pred EEEecCCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 84 ASITTPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 84 ~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
......|.+|.++.+...+.+++.|+|+++.+ ..+.+|.|+|+.................. .++|.+|.|++.|.|+
T Consensus 10 ~~~~~~P~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~L~p~t~Y~fr 88 (117)
T d1uema_ 10 YDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTT-LYTVRGLRPNTIYLFM 88 (117)
T ss_dssp CCSCCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEEECSS-EEEECSCCTTCEEEEE
T ss_pred ceeCccCcCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEeccccccc-cceECCCCCCCEEEEE
Confidence 44456788999999999999999999998763 45889999988765433333333333445 8999999999999999
Q ss_pred EEEEeCCCCcccceee-eeccCCCCC
Q psy4956 162 LFSVYDSKESVAYTSR-NFTTKPNTP 186 (361)
Q Consensus 162 v~a~~~~~~s~~~~~~-~~~t~p~~p 186 (361)
|+|.+..|.+.++... .++|.+.+|
T Consensus 89 V~A~N~~G~s~~S~~s~~v~t~~~~P 114 (117)
T d1uema_ 89 VRAINPQGLSDPSPMSDPVRTQDSGP 114 (117)
T ss_dssp EEEEETTEEEEECCCCCCEECCCSSC
T ss_pred EEEEeCCcCCCCcCCCcCEEeCCCCc
Confidence 9999998887654332 345555444
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1.3e-14 Score=112.06 Aligned_cols=166 Identities=11% Similarity=0.084 Sum_probs=69.8
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
|.|.+|.++.+...+.++|.|+|++|... |.+.+|.|.|.......... ........++.+.+.|.++|.
T Consensus 1 T~Ps~P~~~~~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~y~~~v~ 71 (196)
T d2dtge2 1 TNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELF---------ELDYCLKGLKLPSRTWSPPFE 71 (196)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSCT---------TCSSSCSCCCCCC--------
T ss_pred CcCcCCcCCEEEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCcee---------EEeeEEeccccceeEEEEEEE
Confidence 56889999999999999999999987433 78899999988654322111 012233345778899999999
Q ss_pred EEeCCCCCCceEE-EEecCC----------CCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCce
Q psy4956 260 TVSEDEISTPTTA-QYRTIP----------LRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPI 328 (361)
Q Consensus 260 a~~~~~~s~~~~~-~~~t~~----------~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~ 328 (361)
+.+..+.+..... .....+ ..+..+.+ .......+.+.|..+.+ ....|.+.+............
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 147 (196)
T d2dtge2 72 SEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSF--RKTFEDYLHNVVFVPRP--SRKRRSLGDVGNAGNNEEHRP 147 (196)
T ss_dssp ----------------------------------------------------------------------------CCSC
T ss_pred EEcCCccccCcCCccceecCCCCccccccccCCcCcEE--EeccCCceeecccCcCC--CccceEEEEEEeecCCCccEE
Confidence 9886654432221 111111 11233344 45555667777776644 223333322221111111222
Q ss_pred eecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 329 TKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
.......+++++.+ |+|++.|.|+|+|++++
T Consensus 148 ~~~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~~ 178 (196)
T d2dtge2 148 FEKVVNKESLVISG-LRHFTGYRIELQACNQD 178 (196)
T ss_dssp SCEECSCSEEEECS-SCSSCEEEECCEEESCS
T ss_pred EEeccceEEEEECC-CCCCCEEEEEEEEEECC
Confidence 22345567899986 99999999999999853
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=3.5e-13 Score=90.32 Aligned_cols=83 Identities=22% Similarity=0.439 Sum_probs=69.3
Q ss_pred CCCCCccEEEEEeC-CEEEEEeeCCCCCCcccEEEEEEECCCCC-CCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 90 PDPPTNLSVNVRSG-KTAQIFWSPPISGKYSGFKLKVISLSEKT-PPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 90 ~~~p~~l~~~~~~~-~~v~l~W~~p~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
+.||.+|++...+. +++.|+|++|..+.+.+|+|.|+..++.. ......+....+ ++.|.+|.|++.|.|+|.|.++
T Consensus 2 ~~PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~v~V~a~~~ 80 (94)
T d1fnfa1 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQS-SCTFDNLSPGLEYNVSVYTVKD 80 (94)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEEECTTCC-EEECCCCCTTSCEEEEEEEEET
T ss_pred CCcCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEEEEeCCCcc-EEEECCCCCCCEEEEEEEEEcC
Confidence 56899999988765 45999999986657999999999876543 456667777777 9999999999999999999999
Q ss_pred CCCccc
Q psy4956 168 SKESVA 173 (361)
Q Consensus 168 ~~~s~~ 173 (361)
.+.|.+
T Consensus 81 ~g~s~p 86 (94)
T d1fnfa1 81 DKESVP 86 (94)
T ss_dssp TEECCC
T ss_pred CCEeCC
Confidence 998865
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=2.2e-13 Score=93.85 Aligned_cols=91 Identities=14% Similarity=0.233 Sum_probs=72.8
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|. +|.+.+|+|.|+..+.........+..... ++.|.+|.|++.|.|+|+|.+
T Consensus 10 vP~~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 88 (106)
T d1wfna1 10 VPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLPNVTL-EYRVTGLTALTTYTIEVAAMT 88 (106)
T ss_dssp SCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEECSSCC-EEEEESCCTTCEEEEEEEEEC
T ss_pred CCcCCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEEecCCCee-EEEEccCCCCCEEEEEEEEEC
Confidence 47888999999999999999999877 567899999998876544334444555566 999999999999999999999
Q ss_pred CCCCcccceeeeec
Q psy4956 167 DSKESVAYTSRNFT 180 (361)
Q Consensus 167 ~~~~s~~~~~~~~~ 180 (361)
..|.+..+.....+
T Consensus 89 ~~G~g~~s~~~~~t 102 (106)
T d1wfna1 89 SKGQGQVSASTISS 102 (106)
T ss_dssp SSCEEEEEEEEEEC
T ss_pred CCCCcCCcCCEEcc
Confidence 99888765443333
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=6.1e-13 Score=88.49 Aligned_cols=88 Identities=20% Similarity=0.423 Sum_probs=72.7
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
..||.+|++...+.+++.|+|.+| .+.+.+|+|.|+..++ .......+..... .+.|.+|.||+.|.|+|++.+..+
T Consensus 2 ~spP~~l~v~~~~~~si~v~W~~p-~~~~~~Y~i~~~~~~~-~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g 78 (90)
T d1fnha2 2 VSPPRRARVTDATETTITISWRTK-TETITGFQVDAVPANG-QTPIQRTIKPDVR-SYTITGLQPGTDYKIYLYTLNDNA 78 (90)
T ss_dssp CCCCEEEEEEEECSSEEEEEEECC-SSCCCCEEEEEEESSS-SCCEEEECCTTCS-EEEEESCCTTCEEEEEEEEEETTE
T ss_pred cCcCCCCEEEEecCCEEEEEEECC-CCCCceeEEEEEEccC-CceEEEecCCCcc-EEEeCCCCCCcEEEEEEEEEeCCC
Confidence 578999999999999999999987 4789999999988754 3455566666666 999999999999999999999999
Q ss_pred Ccccceeeeecc
Q psy4956 170 ESVAYTSRNFTT 181 (361)
Q Consensus 170 ~s~~~~~~~~~t 181 (361)
.+.+ .....+|
T Consensus 79 ~s~p-~~~~~~T 89 (90)
T d1fnha2 79 RSSP-VVIDAST 89 (90)
T ss_dssp ECCC-EEEEEEC
T ss_pred CcCC-EEEEEEC
Confidence 8876 3344333
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.3e-13 Score=89.20 Aligned_cols=87 Identities=23% Similarity=0.385 Sum_probs=72.9
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
.||.+|++...+.+++.|+|+++ .+.+.+|.|.|...++........ ......+.|.+|.|++.|.|+|.|.++
T Consensus 3 spP~~l~v~~~~~~si~v~W~~p--~~~~~~Y~i~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 76 (90)
T d1fnha2 3 SPPRRARVTDATETTITISWRTK--TETITGFQVDAVPANGQTPIQRTI----KPDVRSYTITGLQPGTDYKIYLYTLND 76 (90)
T ss_dssp CCCEEEEEEEECSSEEEEEEECC--SSCCCCEEEEEEESSSSCCEEEEC----CTTCSEEEEESCCTTCEEEEEEEEEET
T ss_pred CcCCCCEEEEecCCEEEEEEECC--CCCCceeEEEEEEccCCceEEEec----CCCccEEEeCCCCCCcEEEEEEEEEeC
Confidence 57999999999999999999987 467899999999876644332221 344689999999999999999999999
Q ss_pred CCCCCceEEEEec
Q psy4956 264 DEISTPTTAQYRT 276 (361)
Q Consensus 264 ~~~s~~~~~~~~t 276 (361)
.|.+.+..+...|
T Consensus 77 ~g~s~p~~~~~~T 89 (90)
T d1fnha2 77 NARSSPVVIDAST 89 (90)
T ss_dssp TEECCCEEEEEEC
T ss_pred CCCcCCEEEEEEC
Confidence 9999998887766
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3.1e-13 Score=90.57 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=73.2
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
|.+|.++.+...+.+++.|.|.+|.+ +++.+|.|+|+..++ .+.....+..... .+.|.+|.|++.|.|+|+|.+.
T Consensus 1 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~-~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~N~ 78 (93)
T d2vkwa2 1 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSS-EWKPEIRLPSGSD-HVMLKSLDWNAEYEVYVVAENQ 78 (93)
T ss_dssp CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTS-CCCCCEEECTTCC-EEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCc-ceeeeeeccCCce-EEEEeccccceEEEEEEEEEcC
Confidence 67899999888899999999999874 458999999998765 3444555666676 9999999999999999999999
Q ss_pred CCCcccceeeeecc
Q psy4956 168 SKESVAYTSRNFTT 181 (361)
Q Consensus 168 ~~~s~~~~~~~~~t 181 (361)
.|.|.++. ..++|
T Consensus 79 ~G~s~ps~-~~~~T 91 (93)
T d2vkwa2 79 QGKSKAAH-FVFRT 91 (93)
T ss_dssp TEECCCEE-EEEEC
T ss_pred CCCcCCEe-EEEEe
Confidence 99998754 44544
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3.4e-13 Score=89.61 Aligned_cols=88 Identities=27% Similarity=0.514 Sum_probs=71.4
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
++|.+|++...+.+++.|+|+++ .+.+.+|.|.|...++..... ........+.+.+.+|.|++.|.|+|+|+++
T Consensus 2 daP~nl~v~~~~~~s~~l~W~~p--~~~i~~Y~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~n~ 76 (89)
T d1fnha3 2 DAPSNLRFLATTPNSLLVSWQPP--RARITGYIIKYEKPGSPPREV---VPRPRPGVTEATITGLEPGTEYTIYVIALKN 76 (89)
T ss_dssp CCCEEEEEEEEETTEEEEEEECC--SSCCSEEEEEEECTTSCCEEC---TTCCCTTCCEEEEESCCTTCEEEEEEEEESS
T ss_pred ccCcCCEEEEecCCEEEEEEeCC--CcCCceEEEEEeeccCCccEE---EEEcCCCccEEEEEeeeCCCEEEEEEEEEcC
Confidence 47999999999999999999987 467899999999876544321 1122445688999999999999999999999
Q ss_pred CCCCCceEEEEec
Q psy4956 264 DEISTPTTAQYRT 276 (361)
Q Consensus 264 ~~~s~~~~~~~~t 276 (361)
.|.|.|....++|
T Consensus 77 ~g~S~p~~~~~~T 89 (89)
T d1fnha3 77 NQKSEPLIGRKKT 89 (89)
T ss_dssp SCEEEEEEEEEEC
T ss_pred CCEeCCEEEEEEC
Confidence 9988887766554
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=5e-13 Score=88.02 Aligned_cols=82 Identities=22% Similarity=0.445 Sum_probs=69.9
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~ 170 (361)
++|.++.+...+.+++.|+|++| .+.+.+|+|+|+..++ ......+....+ .+.|.+|.|++.|.|+|.|.++.+.
T Consensus 2 ~~P~nl~v~~~~~~s~~l~W~~p-~~~~~~Y~v~~~~~~~--~~~~~~~~~~~~-~~~~~~L~p~t~Y~v~V~a~~~~~~ 77 (86)
T d1tdqa3 2 DSPRDLMVTASSETSISLIWTKA-SGPIDHYRITFTPSSG--ISSEVTVPRDRT-SYTLTDLEPGAEYIISITAERGRQQ 77 (86)
T ss_dssp CCCEEEEEEEECSSCEEEEEECC-CSCCSEEEEEEECSSS--CCEEEEEESSCS-EEEECCCCTTCCEEEEEEEEETTEE
T ss_pred ccCCCCEEEEecCCEEEEEEeCC-CCCccceEEEEecccc--cceEEEeCCCcc-EEEECCCccccEEEEEEEEEcCCCE
Confidence 68999999999999999999997 5789999999987553 345556667777 9999999999999999999999988
Q ss_pred ccccee
Q psy4956 171 SVAYTS 176 (361)
Q Consensus 171 s~~~~~ 176 (361)
|.+...
T Consensus 78 s~p~~~ 83 (86)
T d1tdqa3 78 SLESTV 83 (86)
T ss_dssp CCCEEE
T ss_pred ECCEEe
Confidence 876443
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.46 E-value=4.3e-13 Score=88.63 Aligned_cols=86 Identities=21% Similarity=0.386 Sum_probs=70.9
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~ 170 (361)
++|.+|.+...+.+++.|+|++|. +.+.+|+|.|+..+ .......+....+ .+.|.+|.|++.|.|+|.|.++.+.
T Consensus 1 DaP~~l~v~~~t~~sv~v~W~~p~-~~~~~Y~v~~~~~~--~~~~~~~~~~~~~-~~~~~~L~p~t~Y~v~V~a~~~~~~ 76 (87)
T d1qr4a1 1 DNPKDLEVSDPTETTLSLRWRRPV-AKFDRYRLTYVSPS--GKKNEMEIPVDST-SFILRGLDAGTEYTISLVAEKGRHK 76 (87)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCS-SCCSEEEEEEECTT--CCEEEEEECTTCS-EEEEESCCSSCEEEEEEEEESSSCB
T ss_pred CcCcCcEEEEecCCEEEEEEECCC-CCcceeEEEeecCC--cceeEEeCCCCcC-EEEECCCCcCCEEEEEEEEEcCCCC
Confidence 579999999999999999999974 77899999998754 3345566677777 9999999999999999999999998
Q ss_pred cccceeeeecc
Q psy4956 171 SVAYTSRNFTT 181 (361)
Q Consensus 171 s~~~~~~~~~t 181 (361)
|.+. ...++|
T Consensus 77 s~~~-~~~~~T 86 (87)
T d1qr4a1 77 SKPT-TIKGST 86 (87)
T ss_dssp CCCE-EEEEEC
T ss_pred ccCE-EEEEEc
Confidence 8763 334443
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.46 E-value=5.9e-13 Score=88.10 Aligned_cols=87 Identities=24% Similarity=0.326 Sum_probs=71.9
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
.+|.+|.+...+.+++.|.|+++ .+.+++|.|.|...+......... ....+.+.+.+|.|++.|.|+|.|+++
T Consensus 2 ~~P~~l~v~~v~~~s~~l~W~~~--~~~~~~Y~i~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 75 (88)
T d1qr4a2 2 GSPKGISFSDITENSATVSWTPP--RSRVDSYRVSYVPITGGTPNVVTV----DGSKTRTKLVKLVPGVDYNVNIISVKG 75 (88)
T ss_dssp CCCSCEEEESCCSSCEEEEECCC--SSCCSEEEEEEEETTCCCCEEEEE----ETTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred cCCcceEEEEecCCEEEEEEEcc--cEeeceEEEEEEeccCCceEEEEe----cCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 47899999999999999999987 467899999999877655433322 233589999999999999999999999
Q ss_pred CCCCCceEEEEec
Q psy4956 264 DEISTPTTAQYRT 276 (361)
Q Consensus 264 ~~~s~~~~~~~~t 276 (361)
.|.|.|....+.|
T Consensus 76 ~g~s~p~~~~~~T 88 (88)
T d1qr4a2 76 FEESEPISGILKT 88 (88)
T ss_dssp TEECCCEEEEEEC
T ss_pred CCCcCCEEEEEEC
Confidence 9999888776554
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.46 E-value=7e-13 Score=87.73 Aligned_cols=81 Identities=21% Similarity=0.467 Sum_probs=70.3
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKE 170 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~ 170 (361)
.+|.+|++..++.+++.|+|++| .+.+.+|.|.|+..+. ............+ ++.|.+|.|++.|.|+|.|.++.+.
T Consensus 2 ~~P~~l~v~~v~~~s~~l~W~~~-~~~~~~Y~i~~~~~~~-~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g~ 78 (88)
T d1qr4a2 2 GSPKGISFSDITENSATVSWTPP-RSRVDSYRVSYVPITG-GTPNVVTVDGSKT-RTKLVKLVPGVDYNVNIISVKGFEE 78 (88)
T ss_dssp CCCSCEEEESCCSSCEEEEECCC-SSCCSEEEEEEEETTC-CCCEEEEEETTCC-EEEECSCCSSCEEEEEEEEEETTEE
T ss_pred cCCcceEEEEecCCEEEEEEEcc-cEeeceEEEEEEeccC-CceEEEEecCCcc-EEEECCCCCCCEEEEEEEEEeCCCC
Confidence 57899999999999999999987 5789999999998765 3445566667777 9999999999999999999999998
Q ss_pred cccc
Q psy4956 171 SVAY 174 (361)
Q Consensus 171 s~~~ 174 (361)
|.+.
T Consensus 79 s~p~ 82 (88)
T d1qr4a2 79 SEPI 82 (88)
T ss_dssp CCCE
T ss_pred cCCE
Confidence 8763
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.45 E-value=9.6e-13 Score=88.05 Aligned_cols=88 Identities=25% Similarity=0.395 Sum_probs=69.4
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEE--eecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII--GFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
++|.+|.+...+.+++.|+|++| .+.+.+|.|.|+..++....... ....... ++.|.+|.|++.|.|+|.|.+..
T Consensus 2 daP~~l~v~~~~~~sv~v~W~~p-~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~ 79 (92)
T d1tdqa2 2 DAPKNLRVGSRTATSLDLEWDNS-EAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTT-KTTLTDLVPGTEYGVGISAVMNS 79 (92)
T ss_dssp CCCEEEEEEEECSSCEEEEEECC-SSCCSEEEEEEEETTCCCCEEEEEECCSSSEE-EEEECSCCTTCEEEEEEEEEETT
T ss_pred ccCcCCEEEEecCCEEEEEEEec-CCcccceEEEEEEcCCCcceeeEEEecCCCee-EEEECCccCCCEEEEEEEEEeCC
Confidence 68999999999999999999997 57889999999987654443322 2233334 89999999999999999999999
Q ss_pred CCcccceeeeecc
Q psy4956 169 KESVAYTSRNFTT 181 (361)
Q Consensus 169 ~~s~~~~~~~~~t 181 (361)
|.|.+. ...++|
T Consensus 80 g~s~p~-~~~~~T 91 (92)
T d1tdqa2 80 KQSIPA-TMNART 91 (92)
T ss_dssp EECCCE-EEEEEC
T ss_pred CEecCE-EEEEEC
Confidence 988763 444444
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=3.5e-13 Score=90.18 Aligned_cols=89 Identities=19% Similarity=0.301 Sum_probs=72.6
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
..+|.++.+...+++++.|+|++| ++.+.+|.|.|+...... .....+..... .+.|.+|.|++.|.|+|+|.+..|
T Consensus 2 l~aP~n~~~~~~s~~si~l~W~~p-~~~~~~Y~i~y~~~~~~~-~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~~G 78 (92)
T d1qg3a1 2 LGAPQNPNAKAAGSRKIHFNWLPP-SGKPMGYRVKYWIQGDSE-SEAHLLDSKVP-SVELTNLYPYCDYEMKVCAYGAQG 78 (92)
T ss_dssp CCCCEEEEEEECSTTCEEEEEECC-SSCCCEEEEEEEETTSCG-GGCEEEEESSS-EEEECSCCTTCEEEEEEEEECSSC
T ss_pred CCcCCCCEEEEccCCEEEEEEEec-CCCccceEEeeeeccccc-cEEEEecCCcc-EEEECCCCCCcEEEEEEEEEeCCc
Confidence 568999999999999999999998 577899999998865433 33344455566 999999999999999999999998
Q ss_pred Ccccceeeeecc
Q psy4956 170 ESVAYTSRNFTT 181 (361)
Q Consensus 170 ~s~~~~~~~~~t 181 (361)
.|..+....++|
T Consensus 79 ~g~~S~~~~~~T 90 (92)
T d1qg3a1 79 EGPYSSLVSCRT 90 (92)
T ss_dssp BCCCCCCEEEEC
T ss_pred CcCCCCCEEEEc
Confidence 887665555555
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=6.5e-13 Score=89.01 Aligned_cols=88 Identities=22% Similarity=0.318 Sum_probs=73.5
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSK 169 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~ 169 (361)
.++|.++.+...+.+++.|+|++| .+.+.+|+|.|+..+ .......+....+ ++.|.+|.|++.|.|+|.|.+..+
T Consensus 2 l~~P~~l~~~~~~~~sv~l~W~~p-~~~~~~Y~v~~~~~~--~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~~~~g 77 (93)
T d2cuma1 2 LEAPRDLEAKEVTPRTALLTWTEP-PVRPAGYLLSFHTPG--GQTQEILLPGGIT-SHQLLGLFPSTSYNARLQAMWGQS 77 (93)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECC-SSCCSEEEEEEECTT--SCEEEEEECSSCS-EEEECSCCTTCEEEEEEEEEBTTB
T ss_pred cCcCCCCEEEEeCCCEEEEEEEcc-ccccccEEEEEEccc--cccEEEEECCCcc-EEEEeCccCCCEEEEEEEEEeCCC
Confidence 578999999999999999999997 477899999998754 3445666777777 999999999999999999999999
Q ss_pred CcccceeeeeccC
Q psy4956 170 ESVAYTSRNFTTK 182 (361)
Q Consensus 170 ~s~~~~~~~~~t~ 182 (361)
.+.+ ....++|.
T Consensus 78 ~s~~-~~~~~tT~ 89 (93)
T d2cuma1 78 LLPP-VSTSFTTG 89 (93)
T ss_dssp CCCC-EEEEEECC
T ss_pred CCCC-EEEEEEeC
Confidence 8876 44556664
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.2e-12 Score=87.20 Aligned_cols=87 Identities=20% Similarity=0.400 Sum_probs=74.0
Q ss_pred CCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCc
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKES 171 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s 171 (361)
||.++.+..++.+++.|+|++| .+.+.+|.++|+......+.....+....+ ++.|.+|.|++.|.|+|+|.+..|.|
T Consensus 2 pP~~l~~~~v~~~si~l~W~~p-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~n~~g~s 79 (90)
T d1fnha1 2 APTDLKFTQVTPTSLSAQWTPP-NVQLTGYRVRVTPKEKTGPMKEINLAPDSS-SVVVSGLMVATKYEVSVYALKDTLTS 79 (90)
T ss_dssp CCEEEEEEEECSSCEEEEEECC-SSCCSEEEEEEEESSSCSCCCEEEECTTCC-EEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CCCCEEEEEecCCEEEEEEEcc-ceeccceEEEEEeeeCCCceEEEEeCCCCe-EEEEecccCceEEEEEEEEEeCCCCc
Confidence 6889999999999999999997 467899999998877666666777777777 99999999999999999999999988
Q ss_pred ccceeeeecc
Q psy4956 172 VAYTSRNFTT 181 (361)
Q Consensus 172 ~~~~~~~~~t 181 (361)
.+. ...++|
T Consensus 80 ~~~-~~~~~T 88 (90)
T d1fnha1 80 RPA-QGVVTT 88 (90)
T ss_dssp CCE-EEEEEC
T ss_pred CCE-eEEEEc
Confidence 764 334444
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1e-12 Score=92.15 Aligned_cols=92 Identities=15% Similarity=0.268 Sum_probs=74.0
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCC-eEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPP-RIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|.|.|+..+..... .......... .+.|.+|.|++.|.|+|+|.
T Consensus 20 ~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~ 98 (117)
T d1wfoa1 20 VPGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSAR-QYTATGLKPESVYLFRITAQ 98 (117)
T ss_dssp CCCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECTTCC-EEEEESCCSSSEEEEEEEEE
T ss_pred CCcCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEecCCceE-EEEECCCCCCCEEEEEEEEE
Confidence 47889999999999999999999877 56789999999886654333 3334455566 99999999999999999999
Q ss_pred eCCCCcccceeeeecc
Q psy4956 166 YDSKESVAYTSRNFTT 181 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t 181 (361)
+..|.+..+....++|
T Consensus 99 n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 99 TRKGWGEAAEALVVTT 114 (117)
T ss_dssp CSSCEEEEEEEEEECC
T ss_pred CCCcCCCCcCCEEEEC
Confidence 9999887655555555
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.44 E-value=1.3e-12 Score=87.45 Aligned_cols=89 Identities=19% Similarity=0.296 Sum_probs=73.4
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
+++|.++.+...+.+++.|+|+++ .+.+.+|.|.|...++......... +...+.+.|.+|.|++.|.|+|.|++
T Consensus 4 ~~~P~~l~v~~v~~~si~v~W~~p--~~~~~~y~i~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~v~V~a~~ 78 (93)
T d1tdqa1 4 IDGPTQILVRDVSDTVAFVEWTPP--RAKVDFILLKYGLVGGEGGKTTFRL---QPPLSQYSVQALRPGSRYEVSISAVR 78 (93)
T ss_dssp SCCCEEEEEEEECSSCEEEEEECC--SSCCSEEEEEEEESSSSCCCEEEEE---CTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCcCCCCEEEEeCCCEEEEEEEcc--ccCCCceEEEEEeccCcceeeEEEe---CCCceEEEEeCcccceEEEEEEEEEe
Confidence 468999999999999999999986 4678999999998766543322221 34468999999999999999999999
Q ss_pred CCCCCCceEEEEec
Q psy4956 263 EDEISTPTTAQYRT 276 (361)
Q Consensus 263 ~~~~s~~~~~~~~t 276 (361)
+.|.+.+....+.|
T Consensus 79 ~~g~s~~~~~~~tT 92 (93)
T d1tdqa1 79 GTNESDASSTQFTT 92 (93)
T ss_dssp TTEECCCEEEEEEC
T ss_pred CCCCcCCEEEEEEC
Confidence 99999888877766
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1.3e-12 Score=87.16 Aligned_cols=88 Identities=26% Similarity=0.386 Sum_probs=71.7
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCC
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 264 (361)
+|.+|++...+.+++.|+|+++. .+.+.+|.|.|...++......... ....+.+.|.+|.|++.|.|+|+|++..
T Consensus 3 pP~~l~~~~~~~~sv~l~W~~p~-~~~~~~y~v~y~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~a~~~~ 78 (91)
T d1fnfa2 3 PPTDLRFTNIGPDTMRVTWAPPP-SIDLTNFLVRYSPVKNEEDVAELSI---SPSDNAVVLTNLLPGTEYVVSVSSVYEQ 78 (91)
T ss_dssp CCEEEEEESCCSSCEEEEEECCT-TCCCSEEEEEEEETTCTTCCEEEEE---CTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred cCCceEEEEeCCCEEEEEEEecC-CCCcceeEEEEEECCCCccEEEEEe---CCCceEEEEeceeCCCEEEEEEEEEcCC
Confidence 78999999999999999999873 4678999999987765443322221 3456889999999999999999999999
Q ss_pred CCCCceEEEEec
Q psy4956 265 EISTPTTAQYRT 276 (361)
Q Consensus 265 ~~s~~~~~~~~t 276 (361)
|.|.+....++|
T Consensus 79 g~S~p~~~~~~T 90 (91)
T d1fnfa2 79 HESTPLRGRQKT 90 (91)
T ss_dssp EECCCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 999888877665
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.6e-13 Score=94.73 Aligned_cols=99 Identities=15% Similarity=0.265 Sum_probs=70.8
Q ss_pred EEEecCCCCCCccEEE--EEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEE
Q psy4956 84 ASITTPPDPPTNLSVN--VRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQ 159 (361)
Q Consensus 84 ~~~~t~~~~p~~l~~~--~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 159 (361)
+.+.+.|.+|.++.+. ..+.+++.|+|.+|.+ +++.+|.|+|+..++..+.....+..... .+.|.+|.|++.|.
T Consensus 5 l~v~~~P~~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~ 83 (108)
T d1wf5a1 5 LRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKAT-SVTVKGLVPARSYQ 83 (108)
T ss_dssp SSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEEESSCCTTCC-EEEEESCCTTCEEE
T ss_pred cEEecCCCCCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCceEEeeeecCCcc-EEEECCCCCCCEEE
Confidence 4455677888775544 4567899999999874 45889999998765432222233344455 89999999999999
Q ss_pred EEEEEEeCCCCcccceeeeeccCC
Q psy4956 160 VQLFSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 160 v~v~a~~~~~~s~~~~~~~~~t~p 183 (361)
|+|+|.+..|.|.++......+.|
T Consensus 84 frV~A~N~~G~s~~S~~~~~~t~P 107 (108)
T d1wf5a1 84 FRLCAVNDVGKGQFSKDTERVSLP 107 (108)
T ss_dssp EEEEEEESSCEEEECCCCSCEECC
T ss_pred EEEEEEcCCcCCCCcCCcCCEECC
Confidence 999999999888665444444443
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.8e-12 Score=86.35 Aligned_cols=78 Identities=17% Similarity=0.317 Sum_probs=68.9
Q ss_pred CccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCccc
Q psy4956 94 TNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVA 173 (361)
Q Consensus 94 ~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~ 173 (361)
.||++...+.+++.|+|++| .+.+.+|+|+|+..++........++...+ ++.|.+|.|++.|.|+|.|.+..|.+.+
T Consensus 1 rnl~v~~~t~~sv~l~W~~p-~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~t-~~~l~~L~p~t~Y~~~V~a~~~~g~s~~ 78 (91)
T d1fnaa_ 1 RDLEVVAATPTSLLISWDAP-AVTVRYYRITYGETGGNSPVQEFTVPGSKS-TATISGLKPGVDYTITVYAVTGRGDSPA 78 (91)
T ss_dssp CCCEEEEECSSCEEEECCCC-SSCCSEEEEEEEETTCCSCCEEEEEETTCC-EEEECSCCTTCEEEEEEEEECTTCCSSC
T ss_pred CCCEEEEeCCCEEEEEEEcc-ceEecEEEEEEEcCCCCceeEEEEeCCCcc-EEEeCCCCCCCEEEEEEEEEeCCccCCC
Confidence 37899999999999999987 478899999999987767777778888888 9999999999999999999998887754
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=7.9e-13 Score=89.04 Aligned_cols=92 Identities=13% Similarity=0.149 Sum_probs=73.2
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
|.+|..+.+...+.++|.|+|++|. ++.+.+|.+.|+......+.... ...... .+.+.+|.|++.|.|+|+|.+.
T Consensus 1 P~~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~ 78 (95)
T d2djsa1 1 PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-ARSQTN-TARIDGLRPGMVYVVQVRARTV 78 (95)
T ss_dssp CCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-EEESSS-EEEEESCCTTCEEEEEEEEEES
T ss_pred CCCCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEe-ecCCcc-EEEEeecCCccEEEEEEEEEcC
Confidence 4567789999999999999999876 56788999999887654433333 233445 8999999999999999999999
Q ss_pred CCCcccceeeeeccCC
Q psy4956 168 SKESVAYTSRNFTTKP 183 (361)
Q Consensus 168 ~~~s~~~~~~~~~t~p 183 (361)
.|.+..+....++|.|
T Consensus 79 ~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 79 AGYGKFSGKMCFQTLT 94 (95)
T ss_dssp SCEEEECCCEEEECCC
T ss_pred CCCCCCCCCEEEEeCC
Confidence 9988766666677765
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.7e-12 Score=88.67 Aligned_cols=90 Identities=17% Similarity=0.306 Sum_probs=71.3
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.|.+|.++.+...+.+++.|+|++|. ++.+.+|+|.|+..+...+. . +..... ++.|.+|.|++.|.|+|+|.+
T Consensus 10 vP~~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~-~--~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 85 (103)
T d1x5ga1 10 LPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ-D--VDVSSH-SYTINGLKKYTEYSFRVVAYN 85 (103)
T ss_dssp CCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC-C--EEECSS-EEEECSCCTTCEEEEEEEEEC
T ss_pred CcccCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeE-E--Eecccc-EEecCCCCCCCEEEEEEEEEc
Confidence 47889999999999999999999877 45789999999986543332 2 233445 899999999999999999999
Q ss_pred CCCCcccceeeeeccC
Q psy4956 167 DSKESVAYTSRNFTTK 182 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~ 182 (361)
..|.|..+....++|.
T Consensus 86 ~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 86 KHGPGVSTPDVAVRTL 101 (103)
T ss_dssp SSCCCCBCCCCCEECC
T ss_pred CCcCcCCCCCEEEEcC
Confidence 9888766555555553
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=9.3e-13 Score=88.64 Aligned_cols=88 Identities=20% Similarity=0.253 Sum_probs=71.4
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCC
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 264 (361)
+|.+|.+...+.+++.|+|+++. .+.+.+|.|.|...+......... .....+++.|.+|.|++.|.|+|.|++..
T Consensus 8 ~P~~l~v~~~t~~si~l~W~~p~-~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~t~~~i~~L~p~t~Y~~~V~a~~~~ 83 (95)
T d2fnba_ 8 QLTDLSFVDITDSSIGLRWTPLN-SSTIIGYRITVVAAGEGIPIFEDF---VDSSVGYYTVTGLEPGIDYDISVITLING 83 (95)
T ss_dssp CCTTCEEECCCSSCEEEECCCCC-CSSCCEEEEEEEEETSCCEEEEEE---CCSSCSEEEECCCCTTSEEEEEEEEEETT
T ss_pred cCCCeEEEEEcCCEEEEEEEecC-CceEEeEEEEEEEeeccceEEEEE---eCCCCeEEEEecccCCEEEEEEEEEEeCC
Confidence 78999999999999999999874 356899999998776544332221 24556899999999999999999999999
Q ss_pred CCCCceEEEEec
Q psy4956 265 EISTPTTAQYRT 276 (361)
Q Consensus 265 ~~s~~~~~~~~t 276 (361)
|.|.+....+.|
T Consensus 84 g~s~p~~~~~~T 95 (95)
T d2fnba_ 84 GESAPTTLTQQT 95 (95)
T ss_dssp EECCCCEEEEEC
T ss_pred cEeCCEEEEEEC
Confidence 999888776654
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=4.6e-13 Score=90.59 Aligned_cols=92 Identities=12% Similarity=0.196 Sum_probs=73.8
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
+|.+|.++.+...+.+++.|+|++|. ++.+.+|+|.|+..+..... ...+..... .+.|.+|.|++.|.|+|+|.+
T Consensus 3 ~P~~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~-~~~~~~~~~-~~~i~~L~p~t~Y~~~V~a~n 80 (98)
T d1x5la1 3 APSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS-YSTLKAVTT-RATVSGLKPGTRYVFQVRART 80 (98)
T ss_dssp CCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS-CEEEEESSS-EEEECSCCTTCEEEECEEEEE
T ss_pred CCCCCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeeccccccee-eEEecCCce-EEEECCCCCCCEEEEEEEEEc
Confidence 57788999999999999999999877 56789999999886543332 233444555 899999999999999999999
Q ss_pred CCCCcccceeeeeccC
Q psy4956 167 DSKESVAYTSRNFTTK 182 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~ 182 (361)
..|.+..+....++|.
T Consensus 81 ~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 81 SAGCGRFSQAMEVETG 96 (98)
T ss_dssp TTEECCCCCCEEEECC
T ss_pred CCCCcCCCCCEEEEcC
Confidence 9988876666667664
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=3.3e-13 Score=92.21 Aligned_cols=91 Identities=20% Similarity=0.288 Sum_probs=72.2
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|.+|.++.+...+.+++.|+|.+|.++.+.+|.|+|+..+...+ ..... .... ++.|.+|.|++.|.|+|+|.+..
T Consensus 10 vP~~P~~~~~~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~-~~~~~-~~~~-~~~i~~L~p~t~Y~~~V~A~n~~ 86 (102)
T d1x5za1 10 VPGQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEE-QRITI-EPGT-SYRLQGLKPNSLYYFRLAARSPQ 86 (102)
T ss_dssp CCCCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCC-BCCEE-CSSS-EEEEECCCTTCEEEECEEEECSS
T ss_pred CCcCCCCeEEEEccCCEEEEEEECCCCCCccceEEEEEeCCCCce-EEEEc-CCcC-EEEECCCCCCCEEEEEEEEEcCC
Confidence 477889999999999999999999888889999999988654322 22222 3345 89999999999999999999999
Q ss_pred CCcccceeeeeccC
Q psy4956 169 KESVAYTSRNFTTK 182 (361)
Q Consensus 169 ~~s~~~~~~~~~t~ 182 (361)
|.+..+....++|.
T Consensus 87 G~g~~S~~v~~~T~ 100 (102)
T d1x5za1 87 GLGASTAEISARTM 100 (102)
T ss_dssp CEEEECCCEEEECC
T ss_pred CEeCCCCCEEEEcC
Confidence 88766555555553
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=2.3e-12 Score=86.24 Aligned_cols=87 Identities=26% Similarity=0.421 Sum_probs=66.9
Q ss_pred CCCcceEEEeccCC-eEEEEeecCCCCCcceEEEEEEeCCCCCCce-eEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 184 NTPGKFIVWFRNET-TLLVLWQPSYPASIYTHYKVSIDPPDAPESV-LYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 184 ~~p~~l~~~~~~~~-~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.||.+|.+.....+ ++.|+|+++. .+.+++|+|.|...++.... .... .++..+.+.|.+|.|++.|.|+|.|+
T Consensus 3 ~PP~~l~v~~~~~ts~i~v~W~~p~-~~~i~~Y~v~y~~~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~v~V~a~ 78 (94)
T d1fnfa1 3 SPPTNLHLEANPDTGVLTVSWERST-TPDITGYRITTTPTNGQQGNSLEEV---VHADQSSCTFDNLSPGLEYNVSVYTV 78 (94)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCS-CSSCCEEEEEEEETTTCSSCCEEEE---ECTTCCEEECCCCCTTSCEEEEEEEE
T ss_pred CcCcCcEEEEecCCCEEEEEeeCCC-CCCeeEEEEEEEEecccCceEEEEE---eCCCccEEEECCCCCCCEEEEEEEEE
Confidence 57999999887655 5999999873 34689999999976553321 1111 13446899999999999999999999
Q ss_pred eCCCCCCceEEEE
Q psy4956 262 SEDEISTPTTAQY 274 (361)
Q Consensus 262 ~~~~~s~~~~~~~ 274 (361)
++.+.|.+....+
T Consensus 79 ~~~g~s~p~s~t~ 91 (94)
T d1fnfa1 79 KDDKESVPISDTI 91 (94)
T ss_dssp ETTEECCCEEEEE
T ss_pred cCCCEeCCEEEEE
Confidence 9999988877654
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1.2e-12 Score=87.69 Aligned_cols=90 Identities=19% Similarity=0.280 Sum_probs=71.3
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
|++|.++.+...+.+++.|+|++|. .+.+.+|.|+|+..++. +.. .+....+ .+.|.+|.|++.|.|+|+|.+.
T Consensus 1 P~~P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~--~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~ 76 (93)
T d1x4xa1 1 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGS-MQI--CYCGPGL-SYEIKGLSPATTYYCRVQALSV 76 (93)
T ss_dssp CCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTS-CCE--EEEESCS-EEEEESCCSSCEEEEEEEEECS
T ss_pred CcCCCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCc-ceE--eecCCcc-EEEEcccceeeEEEEEEEEEEC
Confidence 5778888888999999999999876 34688999999875432 222 2334455 8999999999999999999999
Q ss_pred CCCcccceeeeeccCC
Q psy4956 168 SKESVAYTSRNFTTKP 183 (361)
Q Consensus 168 ~~~s~~~~~~~~~t~p 183 (361)
.|.|..+....++|.|
T Consensus 77 ~G~s~~S~~~~~~Tpp 92 (93)
T d1x4xa1 77 VGAGPFSEVVACVTPP 92 (93)
T ss_dssp SCCCCBCCCEEEECCC
T ss_pred CcCcCCCCcEEEEeCC
Confidence 9988776666666654
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=2.3e-12 Score=86.87 Aligned_cols=92 Identities=16% Similarity=0.221 Sum_probs=71.3
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC--CC-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI--SG-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~--~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
|.+|.++.+...+.+++.|+|++|. ++ .+.+|.++++..+. ............. .+.|.+|.|++.|.|+|+|.+
T Consensus 1 P~~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~-~~~v~~L~p~t~Y~~rV~A~n 78 (96)
T d1x5xa1 1 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETS-GYGFKPKYDGEDL-AYTVKNLRRSTKYKFKVIAYN 78 (96)
T ss_dssp CCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSS-SCCCEEEEEESCS-EEEEESCCSSCEEEEEEEEEC
T ss_pred CccCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccc-eeeeEEeecCCCC-EEEECCCCCCCEEEEEEEEEc
Confidence 5788899999999999999999876 22 46678887765543 3333334444555 899999999999999999999
Q ss_pred CCCCcccceeeeeccCC
Q psy4956 167 DSKESVAYTSRNFTTKP 183 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~p 183 (361)
..|.|.++....++|.|
T Consensus 79 ~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 79 SEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp SSCEEEECCCEEEECCC
T ss_pred CCcEeCCCCCEEEEeCc
Confidence 99988776666777765
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=1.1e-12 Score=88.04 Aligned_cols=89 Identities=20% Similarity=0.345 Sum_probs=71.9
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSE 263 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 263 (361)
++|.+|.+...+.+++.|+|+++ .+.+.+|.+.|.......... ........+++.+.+|.|++.|.|+|.|+++
T Consensus 3 d~P~~l~v~~vt~~sv~l~W~~p--~~~~~~y~i~~~~~~~~~~~~---~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 77 (94)
T d1j8ka_ 3 DRPKGLAFTDVDVDSIKIAWESP--QGQVSRYRVTYSSPEDGIHEL---FPAPDGEEDTAELQGLRPGSEYTVSVVALHD 77 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCC--SSCCSCEEEEEEETTTEEEEE---CCCCCSSCCEEEECSCCCCSEEEEEEEECSS
T ss_pred CCCCCCEEEEecCCEEEEEEeCC--CccccceEEEEEeecCCCceE---EEecCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 57899999999999999999987 456889999998765433221 1122445689999999999999999999999
Q ss_pred CCCCCceEEEEecC
Q psy4956 264 DEISTPTTAQYRTI 277 (361)
Q Consensus 264 ~~~s~~~~~~~~t~ 277 (361)
.|.|.+....+.|.
T Consensus 78 ~g~S~p~~~~~~T~ 91 (94)
T d1j8ka_ 78 DMESQPLIGTQSTA 91 (94)
T ss_dssp SCCCCCEEEEEECC
T ss_pred CCCcCCEEEEEEEC
Confidence 99999988777664
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.39 E-value=1.1e-12 Score=88.18 Aligned_cols=83 Identities=14% Similarity=0.092 Sum_probs=66.0
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeE-EeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
+.+|.++.+...+.+++.|+|++|. .+.+.+|+|.|+..+....... .......+ ++.|.+|.|++.|.|+|+|.
T Consensus 7 ~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~ 85 (95)
T d2ibga1 7 MPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHAR-SFKIAPLETATMYEFKLQSF 85 (95)
T ss_dssp CCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCC-EEEECSCCTTCEEEEEEEEE
T ss_pred CCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeeccCCcee-EEEEeeccCCeEEEEEEEEE
Confidence 4457889999999999999999765 2348899999998765443333 33445555 99999999999999999999
Q ss_pred eCCCCccc
Q psy4956 166 YDSKESVA 173 (361)
Q Consensus 166 ~~~~~s~~ 173 (361)
+..|.|..
T Consensus 86 n~~G~s~~ 93 (95)
T d2ibga1 86 SAASASEF 93 (95)
T ss_dssp CSSCBCCC
T ss_pred eCCccCCC
Confidence 99998864
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=2e-12 Score=85.73 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=69.1
Q ss_pred CCcceEEEeccC--CeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 185 TPGKFIVWFRNE--TTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 185 ~p~~l~~~~~~~--~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
+|.++.+..... +++.|+|++|. .+.+.+|+|+|+..++........ .++..+.+.|.||+|++.|.|+|.|++
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~-~~~i~~Y~i~y~~~~~~~~~~~~~---v~~~~~~~~l~gL~P~t~Y~v~v~av~ 77 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQ-PSHISKYILRWRPKNSVGRWKEAT---IPGHLNSYTIKGLKPGVVYEGQLISIQ 77 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCS-SSCEEEEEEEEEETTCSSCCEEEE---ECSSCCEEEECSCCSSEEEEEEEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeeccc-ccceeEEEEEEeeccccceeeeec---cCCCccEEEECCcccCcEEEEEEEEEe
Confidence 567777765544 79999999874 367999999999876544322221 144568999999999999999999999
Q ss_pred CCCCCCceEEEEecC
Q psy4956 263 EDEISTPTTAQYRTI 277 (361)
Q Consensus 263 ~~~~s~~~~~~~~t~ 277 (361)
..|.+.+....+.|.
T Consensus 78 ~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 78 QYGHQEVTRFDFTTT 92 (93)
T ss_dssp SSSCEEEEEEEEEEC
T ss_pred CCCccCcEEEEEEec
Confidence 999998888877763
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=2.1e-12 Score=88.25 Aligned_cols=89 Identities=15% Similarity=0.206 Sum_probs=69.2
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|.++.+...+.+++.|+|++|... +.+.+|.|.|+..+....... ... ..++.+.+|.|++.|.|+|+|
T Consensus 10 vP~~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~-----~~~~~i~~L~p~t~Y~~~V~A 83 (103)
T d1x5ga1 10 LPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDV-DVS-----SHSYTINGLKKYTEYSFRVVA 83 (103)
T ss_dssp CCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCE-EEC-----SSEEEECSCCTTCEEEEEEEE
T ss_pred CcccCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEE-ecc-----ccEEecCCCCCCCEEEEEEEE
Confidence 4778999999999999999999876433 778999999987765444332 222 378999999999999999999
Q ss_pred EeCCCCCCceE-EEEec
Q psy4956 261 VSEDEISTPTT-AQYRT 276 (361)
Q Consensus 261 ~~~~~~s~~~~-~~~~t 276 (361)
.+..|.|..+. +.+.|
T Consensus 84 ~n~~G~g~~S~~v~v~T 100 (103)
T d1x5ga1 84 YNKHGPGVSTPDVAVRT 100 (103)
T ss_dssp ECSSCCCCBCCCCCEEC
T ss_pred EcCCcCcCCCCCEEEEc
Confidence 99988775443 33444
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=2.6e-12 Score=90.00 Aligned_cols=90 Identities=19% Similarity=0.289 Sum_probs=69.7
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
|.+|.++.+...+.+++.|.|++|... +.+.+|.|.|+..+.......... .......+.+.+|.|++.|.|+|+|+
T Consensus 21 P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~ 98 (117)
T d1wfoa1 21 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEV--LAPSARQYTATGLKPESVYLFRITAQ 98 (117)
T ss_dssp CCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEE--ECTTCCEEEEESCCSSSEEEEEEEEE
T ss_pred CcCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEe--cCCceEEEEECCCCCCCEEEEEEEEE
Confidence 788999999999999999999877433 778999999986655332211111 13345789999999999999999999
Q ss_pred eCCCCCCceEEEE
Q psy4956 262 SEDEISTPTTAQY 274 (361)
Q Consensus 262 ~~~~~s~~~~~~~ 274 (361)
|..|.+.++....
T Consensus 99 n~~G~g~~S~~~~ 111 (117)
T d1wfoa1 99 TRKGWGEAAEALV 111 (117)
T ss_dssp CSSCEEEEEEEEE
T ss_pred CCCcCCCCcCCEE
Confidence 9998877766543
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=5.4e-12 Score=83.85 Aligned_cols=88 Identities=20% Similarity=0.379 Sum_probs=71.1
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCC
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 264 (361)
+|.+|.+...+.+++.|.|+++ .+.+.+|.+.|.............. ....+++.+.+|.|++.|.|+|.|++..
T Consensus 2 pP~~l~~~~v~~~si~l~W~~p--~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~a~n~~ 76 (90)
T d1fnha1 2 APTDLKFTQVTPTSLSAQWTPP--NVQLTGYRVRVTPKEKTGPMKEINL---APDSSSVVVSGLMVATKYEVSVYALKDT 76 (90)
T ss_dssp CCEEEEEEEECSSCEEEEEECC--SSCCSEEEEEEEESSSCSCCCEEEE---CTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCCCEEEEEecCCEEEEEEEcc--ceeccceEEEEEeeeCCCceEEEEe---CCCCeEEEEecccCceEEEEEEEEEeCC
Confidence 6899999999999999999987 4577899999987665443322211 3445889999999999999999999999
Q ss_pred CCCCceEEEEecC
Q psy4956 265 EISTPTTAQYRTI 277 (361)
Q Consensus 265 ~~s~~~~~~~~t~ 277 (361)
|.+.+....+.|.
T Consensus 77 g~s~~~~~~~~T~ 89 (90)
T d1fnha1 77 LTSRPAQGVVTTL 89 (90)
T ss_dssp EECCCEEEEEECC
T ss_pred CCcCCEeEEEEcC
Confidence 9998888766653
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.38 E-value=2.8e-12 Score=86.50 Aligned_cols=85 Identities=22% Similarity=0.183 Sum_probs=67.9
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
|.+|.++.+...+.+++.|+|.+|..+ ..+.+|.|+++..+...+... .......+.+.+.+|.+++.|.|+|+|
T Consensus 2 P~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~---~~~~~~~~~~~v~~L~~~~~Y~frV~A 78 (98)
T d1x5ya1 2 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPA---NKEPVERCGFTVKDLPTGARILFRVVG 78 (98)
T ss_dssp CCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEES---SSSCBSSSEEEEECCCTTCCEEEEEEE
T ss_pred CCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEe---eeecCceeEEEECCCcCCeEEEEEEEE
Confidence 678999999999999999999987544 358999999988766554321 112334578999999999999999999
Q ss_pred EeCCCCCCce
Q psy4956 261 VSEDEISTPT 270 (361)
Q Consensus 261 ~~~~~~s~~~ 270 (361)
.|..|.|.++
T Consensus 79 ~n~~G~s~~s 88 (98)
T d1x5ya1 79 VNIAGRSEPA 88 (98)
T ss_dssp EETTEECCCC
T ss_pred ECCCcCCCCc
Confidence 9998877654
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.37 E-value=5.3e-12 Score=84.28 Aligned_cols=89 Identities=17% Similarity=0.239 Sum_probs=70.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
.|.+|.+|++...+.+++.|+|.+|. .+.+.+|.|.++..+. ...... ..+ .++|.+|.|++.|.|+|+|.
T Consensus 2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~---~~~~~~--~~t-~~~i~~L~p~t~Y~~rV~A~ 75 (94)
T d1x5aa1 2 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE---EWHQMV--LEP-RVLLTKLQPDTTYIVRVRTL 75 (94)
T ss_dssp CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC---EEEEEE--SSS-EEEEESCCSSCEEEEEEEEE
T ss_pred cCCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCc---eEEEee--ccC-EEEECCCCCCCEEEEEEEEE
Confidence 46788999999999999999999875 3446689998876432 222222 345 89999999999999999999
Q ss_pred eCCCCcccceeeeeccCC
Q psy4956 166 YDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~p 183 (361)
+..|.+..+....++|.|
T Consensus 76 n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 76 TPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp CSSSCCCCCCCEEEECCC
T ss_pred cCCcCcCCCCCEEEEeCC
Confidence 999988776677777764
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=4.1e-12 Score=86.98 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=65.5
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC-C--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI-S--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~-~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
++|++|.++.+...+.++|.|+|++|. + ..+.+|.++++......+........... .+.+.+|.|++.|.|+|+|
T Consensus 1 ~Pp~pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~frV~A 79 (104)
T d1bpva_ 1 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILEN-EFTVSGLTEDAAYEFRVIA 79 (104)
T ss_dssp CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCSCCCSS-EEEECSCCSSCCEEEEEEE
T ss_pred CCCCCCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEeecccee-EEEEcCCCCCCEEEEEEEE
Confidence 367889999999999999999999875 2 35889999998876544433333334444 8999999999999999999
Q ss_pred EeCCCC
Q psy4956 165 VYDSKE 170 (361)
Q Consensus 165 ~~~~~~ 170 (361)
.+..|.
T Consensus 80 ~n~~G~ 85 (104)
T d1bpva_ 80 KNAAGA 85 (104)
T ss_dssp ECTTSC
T ss_pred EECCCC
Confidence 998876
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=7.9e-12 Score=83.75 Aligned_cols=83 Identities=23% Similarity=0.487 Sum_probs=66.7
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
|.+|. +.+...+.+++.|+|++|. ++.+.+|.|+|+..+.. ......+..... ++.|.+|.|++.|.|+|+|.+.
T Consensus 1 P~~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~-~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n~ 77 (94)
T d2dn7a1 1 PGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA-RPNTIDFGKDDQ-HFTVTGLHKGTTYIFRLAAKNR 77 (94)
T ss_dssp CCCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS-SCEEEEEETTCC-EEEEECCCTTCEEEEEEEEEET
T ss_pred CCCCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCC-CcEEEEcCCCcc-EEEEEccCCeeEEEEEEEEEcC
Confidence 56675 4455678899999999987 46789999999887653 344556666777 9999999999999999999999
Q ss_pred CCCcccce
Q psy4956 168 SKESVAYT 175 (361)
Q Consensus 168 ~~~s~~~~ 175 (361)
.|.+.++.
T Consensus 78 ~G~g~~s~ 85 (94)
T d2dn7a1 78 AGLGEEFE 85 (94)
T ss_dssp TEEEEEEE
T ss_pred CcCCCCcc
Confidence 99887543
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=8.2e-12 Score=85.30 Aligned_cols=85 Identities=14% Similarity=0.245 Sum_probs=68.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCC-----CCeEEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKT-----PPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
.|++|.++++...+.+++.|+|++|. ++.+.+|.|+|+...... +........... ++.|.+|.|++.|.|+
T Consensus 2 ~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~ 80 (103)
T d1qg3a2 2 VPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNR-MLLIENLRESQPYRYT 80 (103)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCC-EEEECCCCTTCCEEEE
T ss_pred cCccCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEecCCCce-EEEEeecCCCCEEEEE
Confidence 47899999999999999999999887 567899999998764331 122223334444 8999999999999999
Q ss_pred EEEEeCCCCcccc
Q psy4956 162 LFSVYDSKESVAY 174 (361)
Q Consensus 162 v~a~~~~~~s~~~ 174 (361)
|+|.+..|.+.++
T Consensus 81 V~A~n~~G~g~~s 93 (103)
T d1qg3a2 81 VKARNGAGWGPER 93 (103)
T ss_dssp EEEEETTEECCCE
T ss_pred EEEEcCCccCCCc
Confidence 9999999888654
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.36 E-value=5.8e-12 Score=86.60 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=68.0
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCe--EEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPR--IIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
++|.+|.++.+...+.+++.|+|.++.+ ..+.+|.|+|+..+...... ...+..... .+.+.+|.|++.|.|+|+
T Consensus 9 ~pP~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~L~p~t~Y~frV~ 87 (108)
T d1x4za1 9 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRL-SVEITGLEKGISYKFRVR 87 (108)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCC-EEEEESCCTTCEEEEEEE
T ss_pred CCCccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEeecCCcc-EEEECCCCCCCEEEEEEE
Confidence 4688899999999999999999988763 35899999999865543322 233445555 899999999999999999
Q ss_pred EEeCCCCccc
Q psy4956 164 SVYDSKESVA 173 (361)
Q Consensus 164 a~~~~~~s~~ 173 (361)
|.+..|.|.+
T Consensus 88 A~N~~G~s~~ 97 (108)
T d1x4za1 88 ALNMLGESEP 97 (108)
T ss_dssp EEETTEECCC
T ss_pred EECCCcCCCC
Confidence 9999887764
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=3.8e-13 Score=94.73 Aligned_cols=91 Identities=23% Similarity=0.345 Sum_probs=70.9
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.+|.++.+...+.+++.|+|++|. +|.+.+|+|.|+..+...+.....+..... .+.|.+|.|++.|.|+|+|.+
T Consensus 13 ~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~n 91 (119)
T d1x5ha1 13 AAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVSGTQL-SQLIEGLDRGTEYNFRVAALT 91 (119)
T ss_dssp CCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECCBCCTTCC-EEEEECCCSSCEEEEECEEEE
T ss_pred CCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccccceeeeecCCCcc-EEEeCCCCCCCEEEEEEEEEc
Confidence 468899999999999999999874 457889999998865433333334455555 999999999999999999999
Q ss_pred CCCCcccceeeeeccC
Q psy4956 167 DSKESVAYTSRNFTTK 182 (361)
Q Consensus 167 ~~~~s~~~~~~~~~t~ 182 (361)
..|.|..+....++|.
T Consensus 92 ~~G~G~~S~~~~~~T~ 107 (119)
T d1x5ha1 92 INGTGPATDWLSAETF 107 (119)
T ss_dssp TTEEEEECCCEEEECC
T ss_pred CCcCCCCCCCEEEEeC
Confidence 9988765555566664
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=3.3e-12 Score=87.79 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=70.1
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|.++.+...+.+++.|+|+++.. .|.+.+|.|.|+..+......... ......++.|.+|.|++.|.|+|+|
T Consensus 10 vP~~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A 86 (106)
T d1wfna1 10 VPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHY---LPNVTLEYRVTGLTALTTYTIEVAA 86 (106)
T ss_dssp SCCCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEE---ECSSCCEEEEESCCTTCEEEEEEEE
T ss_pred CCcCCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEEe---cCCCeeEEEEccCCCCCEEEEEEEE
Confidence 378899999999999999999987643 378899999998765433211111 1233578999999999999999999
Q ss_pred EeCCCCCCceEEEEec
Q psy4956 261 VSEDEISTPTTAQYRT 276 (361)
Q Consensus 261 ~~~~~~s~~~~~~~~t 276 (361)
.+..|.+.++.....+
T Consensus 87 ~n~~G~g~~s~~~~~t 102 (106)
T d1wfna1 87 MTSKGQGQVSASTISS 102 (106)
T ss_dssp ECSSCEEEEEEEEEEC
T ss_pred ECCCCCcCCcCCEEcc
Confidence 9999988776654443
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=5.1e-12 Score=84.50 Aligned_cols=89 Identities=20% Similarity=0.215 Sum_probs=69.3
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
|++|.++.+...+.+++.|.|+++... +.+.+|.|.|...+........ .. .+.+.+.+|.|++.|.|+|+|.
T Consensus 1 P~~P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~-----~~~~~i~~L~p~t~Y~~~V~A~ 74 (93)
T d1x4xa1 1 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYC-GP-----GLSYEIKGLSPATTYYCRVQAL 74 (93)
T ss_dssp CCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEE-ES-----CSEEEEESCCSSCEEEEEEEEE
T ss_pred CcCCCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeec-CC-----ccEEEEcccceeeEEEEEEEEE
Confidence 567888888888999999999876433 6788999999987665544322 22 4789999999999999999999
Q ss_pred eCCCCCCceE-EEEecC
Q psy4956 262 SEDEISTPTT-AQYRTI 277 (361)
Q Consensus 262 ~~~~~s~~~~-~~~~t~ 277 (361)
|..|.|..+. +.+.|.
T Consensus 75 n~~G~s~~S~~~~~~Tp 91 (93)
T d1x4xa1 75 SVVGAGPFSEVVACVTP 91 (93)
T ss_dssp CSSCCCCBCCCEEEECC
T ss_pred ECCcCcCCCCcEEEEeC
Confidence 9999886654 344553
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=2e-12 Score=89.10 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=70.8
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
..+.||.++.+. .+.++|.|+|++|. .+.+.+|.|+|+..++........+....+ .+.+.+|.|++.|.|+|+|.
T Consensus 6 s~~sPP~~~~~~-~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~rV~A~ 83 (108)
T d1v5ja_ 6 SGLSPPRGLVAV-RTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTET-ELLVPGLIKDVLYEFRLVAF 83 (108)
T ss_dssp CCCCCCEEEEEE-ECSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEEEEEEECSSCC-EEECCCCCTTSCEECCBEEE
T ss_pred CCCCcCCCeEEE-EcCCEEEEEEEecccCCCceeEEEEEeeeeeeeeeeccccccceee-eEEEEeccCCcEEEEEEEEE
Confidence 456789998774 47889999999876 456889999998864422222334555566 89999999999999999999
Q ss_pred eCCCCcccceeeeeccC
Q psy4956 166 YDSKESVAYTSRNFTTK 182 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~ 182 (361)
+..|.+.++....++|.
T Consensus 84 n~~g~s~~S~~~~~~T~ 100 (108)
T d1v5ja_ 84 AGSFVSDPSNTANVSTS 100 (108)
T ss_dssp ETTEEEEECSCCCCCCS
T ss_pred eCCCEeCCcCceEEECC
Confidence 99998876555555554
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=9.9e-12 Score=83.26 Aligned_cols=89 Identities=16% Similarity=0.238 Sum_probs=68.6
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
|.+|. +.+...+.+++.|+|++|... +.+.+|.|.|+..+......... .....++.+.+|.|++.|.|+|+|.
T Consensus 1 P~~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~A~ 75 (94)
T d2dn7a1 1 PGRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDF----GKDDQHFTVTGLHKGTTYIFRLAAK 75 (94)
T ss_dssp CCCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEE----ETTCCEEEEECCCTTCEEEEEEEEE
T ss_pred CCCCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEEc----CCCccEEEEEccCCeeEEEEEEEEE
Confidence 56675 556667889999999987533 78999999998776655433221 2335789999999999999999999
Q ss_pred eCCCCCCceEEEEec
Q psy4956 262 SEDEISTPTTAQYRT 276 (361)
Q Consensus 262 ~~~~~s~~~~~~~~t 276 (361)
|..|.+.+....+.|
T Consensus 76 n~~G~g~~s~~~~~T 90 (94)
T d2dn7a1 76 NRAGLGEEFEKEIRT 90 (94)
T ss_dssp ETTEEEEEEEEEEEC
T ss_pred cCCcCCCCccEEEee
Confidence 999988877766655
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=4.7e-12 Score=84.28 Aligned_cols=73 Identities=19% Similarity=0.368 Sum_probs=60.1
Q ss_pred ccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeCC
Q psy4956 282 LSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSGK 360 (361)
Q Consensus 282 ~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 360 (361)
+||++ ..++.+++.|+|++|.+ .+++|.|.|...+.... ..........+++.+.+ |.||+.|.|+|.|+++.
T Consensus 1 rnl~v--~~~t~~sv~l~W~~p~~--~~~~Y~v~~~~~~~~~~-~~~~~~~~~~t~~~l~~-L~p~t~Y~~~V~a~~~~ 73 (91)
T d1fnaa_ 1 RDLEV--VAATPTSLLISWDAPAV--TVRYYRITYGETGGNSP-VQEFTVPGSKSTATISG-LKPGVDYTITVYAVTGR 73 (91)
T ss_dssp CCCEE--EEECSSCEEEECCCCSS--CCSEEEEEEEETTCCSC-CEEEEEETTCCEEEECS-CCTTCEEEEEEEEECTT
T ss_pred CCCEE--EEeCCCEEEEEEEccce--EecEEEEEEEcCCCCce-eEEEEeCCCccEEEeCC-CCCCCEEEEEEEEEeCC
Confidence 47888 89999999999999987 88999999998765333 22334556778999996 99999999999999764
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=4.6e-12 Score=86.84 Aligned_cols=92 Identities=16% Similarity=0.203 Sum_probs=72.1
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
..|++|.++.+...+.+++.|+|.+|. ++++.+|.|+++...... ........... .+.+.+|.|++.|.|+|+|.
T Consensus 9 ~~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~-~~~~~~~~~~~-~~~~~~L~p~t~Y~frV~A~ 86 (105)
T d1x3da1 9 CEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNG-EFCQCYMGSQK-QFKITKLSPAMGCKFRLSAR 86 (105)
T ss_dssp SCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSS-CCEEEEEESCS-EEEEESCCTTCEEEEECCEE
T ss_pred CCCcCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcc-eeEEEecCCcc-EEEecCCcCCcEEEEEEEEE
Confidence 357888999999999999999999987 346889999887654433 33333344555 89999999999999999999
Q ss_pred eCCCCcccceeeeecc
Q psy4956 166 YDSKESVAYTSRNFTT 181 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t 181 (361)
+..|.|.++....+.|
T Consensus 87 N~~G~s~~S~~~~~~T 102 (105)
T d1x3da1 87 NDYGTSGFSEEVLYYT 102 (105)
T ss_dssp ESSCBCCCCCCEEEEC
T ss_pred CCCeEcCCCCcEEEEC
Confidence 9999887665555554
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=9e-12 Score=85.54 Aligned_cols=95 Identities=15% Similarity=0.256 Sum_probs=72.6
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCC--CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYP--ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
..|.+|.+|.+...+.+++.|+|++|.. .+.+.+|.|.|+..+......... .....+.+.+.+|.|++.|.|+|
T Consensus 9 ~~P~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~p~t~Y~~rV 85 (107)
T d1x5fa1 9 PLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENT---SHPGEMQVTIQNLMPATVYIFRV 85 (107)
T ss_dssp CCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEEC---SSTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCcCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEEE---eCCCccEEEecCCCCCCEEEEEE
Confidence 4478899999999999999999987642 367889999998765544433221 23456889999999999999999
Q ss_pred EEEeCCCCCCceE-EEEecCC
Q psy4956 259 QTVSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 259 ~a~~~~~~s~~~~-~~~~t~~ 278 (361)
+|.+..|.|..+. +.+.|.|
T Consensus 86 ~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 86 MAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEECSSCEEEECCCEEEECCC
T ss_pred EEEeCCCCcCCCCCEEEECCC
Confidence 9999998775433 4555554
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=1.1e-11 Score=82.63 Aligned_cols=88 Identities=15% Similarity=0.125 Sum_probs=68.2
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
..+|.++.+...+.++|.|+|+++ .+.+.+|.|.|............. ......+.+.+|.|++.|.|+|+|.+
T Consensus 2 l~aP~n~~~~~~s~~si~l~W~~p--~~~~~~Y~i~y~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V~A~n 75 (92)
T d1qg3a1 2 LGAPQNPNAKAAGSRKIHFNWLPP--SGKPMGYRVKYWIQGDSESEAHLL----DSKVPSVELTNLYPYCDYEMKVCAYG 75 (92)
T ss_dssp CCCCEEEEEEECSTTCEEEEEECC--SSCCCEEEEEEEETTSCGGGCEEE----EESSSEEEECSCCTTCEEEEEEEEEC
T ss_pred CCcCCCCEEEEccCCEEEEEEEec--CCCccceEEeeeeccccccEEEEe----cCCccEEEECCCCCCcEEEEEEEEEe
Confidence 357999999999999999999987 467889999998765544322221 12247899999999999999999999
Q ss_pred CCCCCCceE-EEEec
Q psy4956 263 EDEISTPTT-AQYRT 276 (361)
Q Consensus 263 ~~~~s~~~~-~~~~t 276 (361)
..|.|..+. +.++|
T Consensus 76 ~~G~g~~S~~~~~~T 90 (92)
T d1qg3a1 76 AQGEGPYSSLVSCRT 90 (92)
T ss_dssp SSCBCCCCCCEEEEC
T ss_pred CCcCcCCCCCEEEEc
Confidence 988876543 34444
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=1.7e-12 Score=90.92 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=72.4
Q ss_pred eeccCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 178 ~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.....|.+|.++.+...+.+++.|+|+++... ..+.+|.|+++..........+.. ....+.+.+.+|.|++.|.|
T Consensus 11 ~~~~~P~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~v~~L~p~t~Y~f 87 (117)
T d1uema_ 11 DLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN---HVKTTLYTVRGLRPNTIYLF 87 (117)
T ss_dssp CSCCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE---EECSSEEEECSCCTTCEEEE
T ss_pred eeCccCcCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEecc---ccccccceECCCCCCCEEEE
Confidence 33456889999999999999999999976433 568999998876554332111111 11247899999999999999
Q ss_pred EEEEEeCCCCCCceEE--EEecCCCCC
Q psy4956 257 SVQTVSEDEISTPTTA--QYRTIPLRP 281 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~~--~~~t~~~~p 281 (361)
+|+|.|..|.+.+... .+.|.+.+|
T Consensus 88 rV~A~N~~G~s~~S~~s~~v~t~~~~P 114 (117)
T d1uema_ 88 MVRAINPQGLSDPSPMSDPVRTQDSGP 114 (117)
T ss_dssp EEEEEETTEEEEECCCCCCEECCCSSC
T ss_pred EEEEEeCCcCCCCcCCCcCEEeCCCCc
Confidence 9999999887654432 245555555
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=99.33 E-value=1.1e-11 Score=84.91 Aligned_cols=84 Identities=12% Similarity=0.044 Sum_probs=67.4
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEee-cCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGF-TENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..+|.++++...+.+++.|+|+++. +|.+.+|+|.|+..+.........+ ..... ++.|.+|.|++.|.|+|+|
T Consensus 5 ~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A 83 (105)
T d1cfba2 5 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQN-NIVIADQPTFVKYLIKVVA 83 (105)
T ss_dssp SCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCC-EEEECSCCSSCEEEEEEEE
T ss_pred CCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEEecCCCcc-EEEECCCCCCCEEEEEEEE
Confidence 3578999999989999999999754 5678999999988765444443333 44455 8999999999999999999
Q ss_pred EeCCCCcccc
Q psy4956 165 VYDSKESVAY 174 (361)
Q Consensus 165 ~~~~~~s~~~ 174 (361)
.+..|.|..+
T Consensus 84 ~N~~G~gp~S 93 (105)
T d1cfba2 84 INDRGESNVA 93 (105)
T ss_dssp EETTEECSSC
T ss_pred EeCCcCCCCC
Confidence 9999988643
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=99.33 E-value=5.2e-12 Score=85.71 Aligned_cols=85 Identities=11% Similarity=0.152 Sum_probs=66.2
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeE-EeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
..|++|.++.+. ...+++.|+|++|.+ +++.+|.|+|+......+... ........ ++.+.+|.|++.|.|+|+|
T Consensus 4 dvP~~P~~~~v~-~~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~p~t~Y~frV~A 81 (100)
T d1cfba1 4 DVPNAPKLTGIT-CQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTD-SSFVVQMSPWANYTFRVIA 81 (100)
T ss_dssp CCCCCCEEEEEE-ECSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTC-SEEEEECCSSEEEEEEEEE
T ss_pred cCCCcCcCcEEE-EcCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecCCce-EEEEecCCCCCEEEEEEEE
Confidence 468899999876 467899999998873 468999999988655444433 33333444 7899999999999999999
Q ss_pred EeCCCCcccc
Q psy4956 165 VYDSKESVAY 174 (361)
Q Consensus 165 ~~~~~~s~~~ 174 (361)
.+..|.|.++
T Consensus 82 ~n~~G~g~~S 91 (100)
T d1cfba1 82 FNKIGASPPS 91 (100)
T ss_dssp EETTEECCCC
T ss_pred EeCCcCCCCc
Confidence 9998888654
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=4.7e-12 Score=86.19 Aligned_cols=93 Identities=12% Similarity=0.173 Sum_probs=71.0
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeE-----EeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLY-----VEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.|.+|.+|.+...+.+++.|+|+++ .+.+.+|.|.+...+....... .......+...++.|.+|+|++.|.|
T Consensus 3 ~Pp~~~~l~v~~~t~~sv~v~W~pp--~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~ 80 (101)
T d2cuia1 3 SRPRLSQLSVTDVTTSSLRLNWEAP--PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSL 80 (101)
T ss_dssp CCCCCCCCEEESCCSSCEEEECCCC--TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEE
T ss_pred CccCCCCcEEEEECCCEEEEEEEec--cccccceEEEEEecCCCceeeccCCcceeEeecccceeEEEeCCCCcCCEEEE
Confidence 4678899999999999999999976 4678999999987643221100 00001134568899999999999999
Q ss_pred EEEEEeCCCCCCceEEEEec
Q psy4956 257 SVQTVSEDEISTPTTAQYRT 276 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~~~~~t 276 (361)
+|+|+++.|.+.+....++|
T Consensus 81 ~V~a~~~~g~g~~~~~~~~T 100 (101)
T d2cuia1 81 TLYGLRGPHKADSIQGTART 100 (101)
T ss_dssp EEEEECSSSEEEEEEEEEEC
T ss_pred EEEEEeCCcEeCCeEEEeEE
Confidence 99999999988887777665
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=3.4e-12 Score=88.75 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=72.3
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
..|.+|.++.+.. ..+++.|.|.++... +.+.+|.|+|...+........ ....+.+.+.+|.|++.|.|+|+
T Consensus 19 ~vP~~P~~~~~~~-~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~t~Y~~~V~ 92 (113)
T d1x5ia1 19 RVPEVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKV-----DYKQRYYTIENLDPSSHYVITLK 92 (113)
T ss_dssp SCCCSCSEEEEEE-ETTEEEEEEECCSCTTBCCCEEEEEECSSCGGGEEEEC-----CTTCCEEEECSCCSSCEECCEEE
T ss_pred CCCCCCEeeeeee-CCCEEEEEEEccccCCccEEEEEEEeeeccccceeeee-----eCCccEEEEeccccCcEEEEEEE
Confidence 3578899999875 467999999976433 6789999999876544333222 34468999999999999999999
Q ss_pred EEeCCCCCCceEEEEecCC
Q psy4956 260 TVSEDEISTPTTAQYRTIP 278 (361)
Q Consensus 260 a~~~~~~s~~~~~~~~t~~ 278 (361)
|.|..|.|.+....+.|.|
T Consensus 93 A~n~~G~g~~~~~~~~T~P 111 (113)
T d1x5ia1 93 AFNNVGEGIPLYESAVTRP 111 (113)
T ss_dssp EECSSCBCCCCCCCEECCC
T ss_pred EECCCcCCCCeeeEEEeCC
Confidence 9999999988777777765
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=1e-11 Score=83.67 Aligned_cols=92 Identities=15% Similarity=0.185 Sum_probs=68.2
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
|.+|.++.+...+.+++.|+|+++... ..+..|.+.++..+.......... ...+.+.+.+|.|++.|.|+|+|
T Consensus 1 P~~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~----~~~~~~~v~~L~p~t~Y~~rV~A 76 (96)
T d1x5xa1 1 PSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD----GEDLAYTVKNLRRSTKYKFKVIA 76 (96)
T ss_dssp CCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE----ESCSEEEEESCCSSCEEEEEEEE
T ss_pred CccCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec----CCCCEEEECCCCCCCEEEEEEEE
Confidence 567889999999999999999876433 346788888876655443322221 12478999999999999999999
Q ss_pred EeCCCCCCceE-EEEecCC
Q psy4956 261 VSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 261 ~~~~~~s~~~~-~~~~t~~ 278 (361)
.+..|.|.++. +.+.|.|
T Consensus 77 ~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 77 YNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp ECSSCEEEECCCEEEECCC
T ss_pred EcCCcEeCCCCCEEEEeCc
Confidence 99998776543 4556655
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.31 E-value=1.2e-11 Score=85.08 Aligned_cols=87 Identities=21% Similarity=0.327 Sum_probs=66.3
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCC-ceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPE-SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
+.|.+|.++.+...+.+++.|+|.++... ..+.+|.|+|+..+... +...... .......+.+.+|.|++.|.|+|
T Consensus 9 ~pP~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~L~p~t~Y~frV 86 (108)
T d1x4za1 9 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA--IPPSRLSVEITGLEKGISYKFRV 86 (108)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE--ECTTCCEEEEESCCTTCEEEEEE
T ss_pred CCCccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEe--ecCCccEEEECCCCCCCEEEEEE
Confidence 34788999999999999999999876433 46899999998755433 2222211 13456789999999999999999
Q ss_pred EEEeCCCCCCc
Q psy4956 259 QTVSEDEISTP 269 (361)
Q Consensus 259 ~a~~~~~~s~~ 269 (361)
+|.|..|.|.+
T Consensus 87 ~A~N~~G~s~~ 97 (108)
T d1x4za1 87 RALNMLGESEP 97 (108)
T ss_dssp EEEETTEECCC
T ss_pred EEECCCcCCCC
Confidence 99998887654
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=1.2e-11 Score=84.44 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=70.3
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCc--eeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPES--VLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
.|++|.++.+...+.+++.|+|+++... +.+.+|.|.|........ ..............++.+.+|+|++.|.|+|
T Consensus 2 ~P~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 81 (103)
T d1qg3a2 2 VPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTV 81 (103)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEEE
T ss_pred cCccCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEEE
Confidence 3788999999999999999999876433 789999999976543221 1001111123445789999999999999999
Q ss_pred EEEeCCCCCCceEEEEe
Q psy4956 259 QTVSEDEISTPTTAQYR 275 (361)
Q Consensus 259 ~a~~~~~~s~~~~~~~~ 275 (361)
+|.+..|.+++......
T Consensus 82 ~A~n~~G~g~~s~~~v~ 98 (103)
T d1qg3a2 82 KARNGAGWGPEREAIIN 98 (103)
T ss_dssp EEEETTEECCCEEEEEC
T ss_pred EEEcCCccCCCcccccE
Confidence 99999998877765443
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=2e-11 Score=82.94 Aligned_cols=83 Identities=19% Similarity=0.315 Sum_probs=68.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCC--------CCCeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEK--------TPPRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
.|.+|.+|.+..++.+++.|+|++| .+.+.+|.|+|+..... .......+..... ++.|.+|.|++.|.|
T Consensus 3 ~Pp~~~~l~v~~~t~~sv~v~W~pp-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~L~p~t~Y~~ 80 (101)
T d2cuia1 3 SRPRLSQLSVTDVTTSSLRLNWEAP-PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRH-SAVLRDLRSGTLYSL 80 (101)
T ss_dssp CCCCCCCCEEESCCSSCEEEECCCC-TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCC-EEEECSCCTTCEEEE
T ss_pred CccCCCCcEEEEECCCEEEEEEEec-cccccceEEEEEecCCCceeeccCCcceeEeeccccee-EEEeCCCCcCCEEEE
Confidence 5777899999999999999999987 57889999999875432 1233445566666 999999999999999
Q ss_pred EEEEEeCCCCccc
Q psy4956 161 QLFSVYDSKESVA 173 (361)
Q Consensus 161 ~v~a~~~~~~s~~ 173 (361)
+|+|.+..|.+.+
T Consensus 81 ~V~a~~~~g~g~~ 93 (101)
T d2cuia1 81 TLYGLRGPHKADS 93 (101)
T ss_dssp EEEEECSSSEEEE
T ss_pred EEEEEeCCcEeCC
Confidence 9999999998875
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.30 E-value=7.8e-12 Score=83.44 Aligned_cols=88 Identities=15% Similarity=0.171 Sum_probs=67.4
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.+|.+|++...+.++|.|+|+++... +.+.+|.|.+...+...... . . .+.+.|.+|.|++.|.|+|+
T Consensus 2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~~~~~--~-~-----~t~~~i~~L~p~t~Y~~rV~ 73 (94)
T d1x5aa1 2 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQM--V-L-----EPRVLLTKLQPDTTYIVRVR 73 (94)
T ss_dssp CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSCEEEEE--E-S-----SSEEEEESCCSSCEEEEEEE
T ss_pred cCCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCceEEEe--e-c-----cCEEEECCCCCCCEEEEEEE
Confidence 3678899999999999999999876432 55678999998765422211 1 1 37899999999999999999
Q ss_pred EEeCCCCCCceE-EEEecC
Q psy4956 260 TVSEDEISTPTT-AQYRTI 277 (361)
Q Consensus 260 a~~~~~~s~~~~-~~~~t~ 277 (361)
|.|..|.+..+. +.+.|.
T Consensus 74 A~n~~G~g~~S~~~~~~T~ 92 (94)
T d1x5aa1 74 TLTPLGPGPFSPDHEFRTS 92 (94)
T ss_dssp EECSSSCCCCCCCEEEECC
T ss_pred EEcCCcCcCCCCCEEEEeC
Confidence 999999876543 455554
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=4.8e-12 Score=86.26 Aligned_cols=89 Identities=20% Similarity=0.321 Sum_probs=68.8
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.|.+|.++.+...+.+++.|+|+++. .+.+.+|.|.|+..+.......... ...++.+.+|.|++.|.|+|.|.
T Consensus 10 vP~~P~~~~~~~~~~~si~l~W~~p~-~~~i~~Y~i~y~~~~~~~~~~~~~~-----~~~~~~i~~L~p~t~Y~~~V~A~ 83 (102)
T d1x5za1 10 VPGQPLNFKAEPESETSILLSWTPPR-SDTIANYELVYKDGEHGEEQRITIE-----PGTSYRLQGLKPNSLYYFRLAAR 83 (102)
T ss_dssp CCCCCEEEEEECSSSSEEEEEEECCS-CCCCCEEEECBEESSSCCCBCCEEC-----SSSEEEEECCCTTCEEEECEEEE
T ss_pred CCcCCCCeEEEEccCCEEEEEEECCC-CCCccceEEEEEeCCCCceEEEEcC-----CcCEEEECCCCCCCEEEEEEEEE
Confidence 47889999999999999999999874 4678999999987655443222211 23789999999999999999999
Q ss_pred eCCCCCCceE-EEEec
Q psy4956 262 SEDEISTPTT-AQYRT 276 (361)
Q Consensus 262 ~~~~~s~~~~-~~~~t 276 (361)
+..|.+.++. +.+.|
T Consensus 84 n~~G~g~~S~~v~~~T 99 (102)
T d1x5za1 84 SPQGLGASTAEISART 99 (102)
T ss_dssp CSSCEEEECCCEEEEC
T ss_pred cCCCEeCCCCCEEEEc
Confidence 9988765543 44554
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=8.1e-12 Score=84.87 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=69.2
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC-C-C-CcccEEEEEEECCCCCCCeEEee---cCCCCceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI-S-G-KYSGFKLKVISLSEKTPPRIIGF---TENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~-~-~-~~~~y~v~~~~~~~~~~~~~~~~---~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
.|.+|..+.+ ....+++.|.|++|. + | ++.+|.|+|+..+...+...... ..... .+.|.+|.|++.|.|+|
T Consensus 2 vP~~P~~~~~-~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~frV 79 (101)
T d2haza1 2 TPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEG-IVTIVGLKPETTYAVRL 79 (101)
T ss_dssp CCCCCEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHS-EEEECSCCTTCEEEEEE
T ss_pred cCcCCccCEE-EeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeeeccccee-EEEecCCCCCeEEEEEE
Confidence 3677755444 457789999999876 2 3 58999999998765544433222 12233 89999999999999999
Q ss_pred EEEeCCCCcccceeeeeccCC
Q psy4956 163 FSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~p 183 (361)
+|.+..|.|..+....++|.|
T Consensus 80 ~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 80 AALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEETTEECCCCCCEEEECCC
T ss_pred EEEeCCcCcCCCCceeEEeCC
Confidence 999999988877777777765
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=1.3e-11 Score=82.83 Aligned_cols=92 Identities=16% Similarity=0.248 Sum_probs=69.3
Q ss_pred CCCCcceEEEeccCCeEEEEeecCC-CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSY-PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~-~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
|.+|..+.+...+.++|.|.|+++. ..+.+.+|.+.++..+........... ....+.+.+|.|++.|.|+|+|.
T Consensus 1 P~~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~ 76 (95)
T d2djsa1 1 PSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARS----QTNTARIDGLRPGMVYVVQVRAR 76 (95)
T ss_dssp CCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEE----SSSEEEEESCCTTCEEEEEEEEE
T ss_pred CCCCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeecC----CccEEEEeecCCccEEEEEEEEE
Confidence 4567789999999999999998764 337899999999877654432222211 24789999999999999999999
Q ss_pred eCCCCCCce-EEEEecCC
Q psy4956 262 SEDEISTPT-TAQYRTIP 278 (361)
Q Consensus 262 ~~~~~s~~~-~~~~~t~~ 278 (361)
+..|.+..+ .+.+.|.|
T Consensus 77 n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 77 TVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp ESSCEEEECCCEEEECCC
T ss_pred cCCCCCCCCCCEEEEeCC
Confidence 999877543 34556654
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.29 E-value=9.9e-12 Score=84.51 Aligned_cols=93 Identities=16% Similarity=0.101 Sum_probs=73.0
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCC--CeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTP--PRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
++.+|.++.+..++.+++.|+|+++. ++.+.+|+|.|+..++... .....+..... ++.|.+|.|++.|.|+|
T Consensus 1 P~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~v 79 (101)
T d1x4ya1 1 PVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRY-WHSISHLQPETSYDIKM 79 (101)
T ss_dssp CCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCC-EEEECSCCTTCEEEEEE
T ss_pred CCCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEEcCCee-EEEEcCCCCCCEEEEEE
Confidence 35689999999999999999998653 4678899999987654332 22234455566 89999999999999999
Q ss_pred EEEeCCCCcccceeeeeccC
Q psy4956 163 FSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~ 182 (361)
+|.+..|.|..+....++|+
T Consensus 80 ~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 80 QCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp EEECTTCCCCCCCCEEEECC
T ss_pred EEEcCCCCCCCCCcEEEEcc
Confidence 99999998877666666654
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.29 E-value=1e-11 Score=83.32 Aligned_cols=84 Identities=17% Similarity=0.187 Sum_probs=63.7
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.+|.++.+...+.+++.|.|++|... +.+.+|.|.|+..+.......... .....+.+.+.+|.|++.|.|+|+|+
T Consensus 8 ~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~ 85 (95)
T d2ibga1 8 PVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATI--EGAHARSFKIAPLETATMYEFKLQSF 85 (95)
T ss_dssp CCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEE--ECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeec--cCCceeEEEEeeccCCeEEEEEEEEE
Confidence 45888999999999999999865332 568999999987654332111111 13446889999999999999999999
Q ss_pred eCCCCCCc
Q psy4956 262 SEDEISTP 269 (361)
Q Consensus 262 ~~~~~s~~ 269 (361)
|..|.|+.
T Consensus 86 n~~G~s~~ 93 (95)
T d2ibga1 86 SAASASEF 93 (95)
T ss_dssp CSSCBCCC
T ss_pred eCCccCCC
Confidence 99987754
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=8.7e-12 Score=88.74 Aligned_cols=104 Identities=17% Similarity=0.233 Sum_probs=76.0
Q ss_pred cceeeEEEecCCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCC-eEEeecCCCCceEEEcCCCCC
Q psy4956 79 WLTWTASITTPPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPP-RIIGFTENPPAGYSLKDLTPG 155 (361)
Q Consensus 79 ~~~~~~~~~t~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~~~l~~L~p~ 155 (361)
+.+........|.+|.++.+...+.+++.|+|+++.. +.+..|.++|+........ .......... .+.+.+|.|+
T Consensus 6 s~p~~~~v~d~P~~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~ 84 (127)
T d1ueya_ 6 SGPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQ-TTAQLNLSPY 84 (127)
T ss_dssp CCCCCCCCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSC-CEEEECCCTT
T ss_pred CCCccccccccCcCCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeecCCce-EEEECCCccC
Confidence 3344445556789999999999999999999998773 4578999998876544333 2332333444 7999999999
Q ss_pred cEEEEEEEEEeCCCCccccee-eeeccCC
Q psy4956 156 GSYQVQLFSVYDSKESVAYTS-RNFTTKP 183 (361)
Q Consensus 156 ~~Y~v~v~a~~~~~~s~~~~~-~~~~t~p 183 (361)
+.|.|+|+|.+..|.|.++.. ..+++.+
T Consensus 85 t~Y~frV~A~n~~G~s~~S~~s~~~~t~~ 113 (127)
T d1ueya_ 85 VNYSFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp CEECCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred CEEEEEEEEEcCCcCcCCcCCcccEEcCC
Confidence 999999999999988865433 3344543
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=99.29 E-value=1e-11 Score=84.24 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=60.5
Q ss_pred cCCCCCccceEEeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEE
Q psy4956 276 TIPLRPLSFTYDKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354 (361)
Q Consensus 276 t~~~~p~~l~~~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 354 (361)
..|.+|.++.+ . ...+++.|+|++|.. .+.+.+|.|+|+..................+++.+.+ |.||+.|.|+|
T Consensus 4 dvP~~P~~~~v--~-~~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~p~t~Y~frV 79 (100)
T d1cfba1 4 DVPNAPKLTGI--T-CQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQ-MSPWANYTFRV 79 (100)
T ss_dssp CCCCCCEEEEE--E-ECSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEE-CCSSEEEEEEE
T ss_pred cCCCcCcCcEE--E-EcCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecCCceEEEEec-CCCCCEEEEEE
Confidence 35888999988 4 466789999998743 3578999999998765433333333334556788886 99999999999
Q ss_pred EEEeC
Q psy4956 355 KTVSG 359 (361)
Q Consensus 355 ~a~~~ 359 (361)
+|.++
T Consensus 80 ~A~n~ 84 (100)
T d1cfba1 80 IAFNK 84 (100)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 99985
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=1e-11 Score=85.40 Aligned_cols=84 Identities=18% Similarity=0.341 Sum_probs=62.5
Q ss_pred EecCCCCCccceEEeeecCCceEEEEeeCCC-CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEE
Q psy4956 274 YRTIPLRPLSFTYDKASITSNSLRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352 (361)
Q Consensus 274 ~~t~~~~p~~l~~~~~~~~~~si~l~W~~~~-~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 352 (361)
..+.|.+|.++.+....++.+++.|+|.+|. +.+.+.+|.|+|+..+. .+...........+.+++.+ |.||+.|.|
T Consensus 7 v~~~P~~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~f 84 (108)
T d1wf5a1 7 VRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNA-PWTVLLASVDPKATSVTVKG-LVPARSYQF 84 (108)
T ss_dssp CCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTC-CCEEEESSCCTTCCEEEEES-CCTTCEEEE
T ss_pred EecCCCCCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccC-CceEEeeeecCCccEEEECC-CCCCCEEEE
Confidence 4566778877655335678899999999974 33578999999987654 22222223345667899986 999999999
Q ss_pred EEEEEeC
Q psy4956 353 LVKTVSG 359 (361)
Q Consensus 353 ~V~a~~~ 359 (361)
+|+|.+.
T Consensus 85 rV~A~N~ 91 (108)
T d1wf5a1 85 RLCAVND 91 (108)
T ss_dssp EEEEEES
T ss_pred EEEEEcC
Confidence 9999986
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=1.2e-11 Score=83.49 Aligned_cols=90 Identities=18% Similarity=0.235 Sum_probs=68.9
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCcee-EEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVL-YVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.+|.++.+...+.+++.|+|++|.. .+.+.+|.|.|...+...... .... ..+.+.|.+|.|++.|.|+|+
T Consensus 3 ~P~~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~-----~~~~~~i~~L~p~t~Y~~~V~ 77 (98)
T d1x5la1 3 APSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKA-----VTTRATVSGLKPGTRYVFQVR 77 (98)
T ss_dssp CCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEE-----SSSEEEECSCCTTCEEEECEE
T ss_pred CCCCCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEEecC-----CceEEEECCCCCCCEEEEEEE
Confidence 577889999999999999999987643 377899999998765543222 2222 247899999999999999999
Q ss_pred EEeCCCCCCce-EEEEec
Q psy4956 260 TVSEDEISTPT-TAQYRT 276 (361)
Q Consensus 260 a~~~~~~s~~~-~~~~~t 276 (361)
|.+..|.+..+ .+.+.|
T Consensus 78 a~n~~G~g~~S~~v~~~T 95 (98)
T d1x5la1 78 ARTSAGCGRFSQAMEVET 95 (98)
T ss_dssp EEETTEECCCCCCEEEEC
T ss_pred EEcCCCCcCCCCCEEEEc
Confidence 99998876543 334544
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=4e-11 Score=84.96 Aligned_cols=97 Identities=24% Similarity=0.377 Sum_probs=74.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCC-------CCeEEeecCCCCceEEEcCCCCCcE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKT-------PPRIIGFTENPPAGYSLKDLTPGGS 157 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~L~p~~~ 157 (361)
++.+|.++.+...+.+++.|+|++|. ++.+.+|.+.++...... ......+..... .+.|.+|.|++.
T Consensus 14 P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~ 92 (125)
T d1uena_ 14 PMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKT-HGMLPGLEPFSH 92 (125)
T ss_dssp CCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCS-EEEEESCCSSCE
T ss_pred CCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCcc-EEEECCCCCCCE
Confidence 45678999999999999999999876 567888999887643221 112344555666 999999999999
Q ss_pred EEEEEEEEeCCCCcccceeeeeccCCCCC
Q psy4956 158 YQVQLFSVYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 158 Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p 186 (361)
|.|+|+|.+..|.+..+....++|.+..|
T Consensus 93 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 121 (125)
T d1uena_ 93 YTLNVRVVNGKGEGPASPDRVFNTPEGSG 121 (125)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCCCCS
T ss_pred EEEEEEEEeCCcccCCCCCEEEECCCCCc
Confidence 99999999999887766667777765433
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=99.28 E-value=3e-11 Score=79.54 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=63.0
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
.+|.+|.+|.+...+.+++.|+|++|. ++.+.+|+|.+. ...... ...+ ++.+.+|.|++.|.|+|+|.+
T Consensus 2 ~AP~~P~~l~~~~~~~~sv~lsW~~p~~~~~i~~Y~i~~~------~~~~~~--~~~t-~~~~~~L~p~t~Y~~~V~A~n 72 (88)
T d1k85a_ 2 MAPTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNG------TALATT--VTGT-TATISGLAADTSYTFTVKAKD 72 (88)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCSSEEEEEEEES------SSEEEE--ESSS-EEEECCCCSSCEEEEEEEEEE
T ss_pred cCcCCCCCcEEEEecCCEEEEEEeCCCCCCCEEEEEEEcc------ceEEEe--cCCC-EEEECCCCCCCEEEEEEEEEE
Confidence 358899999999999999999999876 346788998641 122222 2344 899999999999999999999
Q ss_pred CCC-Ccccceeeeec
Q psy4956 167 DSK-ESVAYTSRNFT 180 (361)
Q Consensus 167 ~~~-~s~~~~~~~~~ 180 (361)
..| .+.++....++
T Consensus 73 ~~G~~s~~S~~v~vt 87 (88)
T d1k85a_ 73 AAGNVSAASNAVSVK 87 (88)
T ss_dssp TTTEECCCCCCEEEE
T ss_pred CCCCcCCCCcCEEEE
Confidence 887 45554444433
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=1.7e-11 Score=84.64 Aligned_cols=91 Identities=19% Similarity=0.314 Sum_probs=69.4
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeE----EeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRI----IGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~----~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
..||.++.+...+.+++.|+|++|. ++.+.+|.|.|+..+....... ........ .+.|.+|.|++.|.|+
T Consensus 9 ~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~ 87 (109)
T d1va9a1 9 DGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSE-VYTLDNLKKFAQYGVV 87 (109)
T ss_dssp SSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEE-EEEEESCCSSCCEEEE
T ss_pred CCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCee-EEEECCCCcceEEEEE
Confidence 3578899999999999999999875 4578899999988654432221 11223334 8999999999999999
Q ss_pred EEEEeCCCCcccceeeeecc
Q psy4956 162 LFSVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 162 v~a~~~~~~s~~~~~~~~~t 181 (361)
|+|.+..|.|..+....++|
T Consensus 88 V~a~n~~G~g~~S~~v~~~T 107 (109)
T d1va9a1 88 VQAFNRAGTGPSSSEINATT 107 (109)
T ss_dssp EEEEETTEECCCCCCEECCC
T ss_pred EEEEcCCcCCCCCCCEEEEc
Confidence 99999998887655555555
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=1.4e-11 Score=85.53 Aligned_cols=91 Identities=20% Similarity=0.336 Sum_probs=71.3
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSV 165 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~ 165 (361)
..|.+|.++.+.. ..+++.|+|++|. ++.+.+|.|+|+..+ .......+....+ .+.|.+|.|++.|.|+|+|.
T Consensus 19 ~vP~~P~~~~~~~-~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~--~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~A~ 94 (113)
T d1x5ia1 19 RVPEVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGS--PHAQTIKVDYKQR-YYTIENLDPSSHYVITLKAF 94 (113)
T ss_dssp SCCCSCSEEEEEE-ETTEEEEEEECCSCTTBCCCEEEEEECSSC--GGGEEEECCTTCC-EEEECSCCSSCEECCEEEEE
T ss_pred CCCCCCEeeeeee-CCCEEEEEEEccccCCccEEEEEEEeeecc--ccceeeeeeCCcc-EEEEeccccCcEEEEEEEEE
Confidence 4578899998865 5689999999876 456899999987643 2344555666666 99999999999999999999
Q ss_pred eCCCCcccceeeeeccCC
Q psy4956 166 YDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 166 ~~~~~s~~~~~~~~~t~p 183 (361)
+..|.|.+ ....++|.|
T Consensus 95 n~~G~g~~-~~~~~~T~P 111 (113)
T d1x5ia1 95 NNVGEGIP-LYESAVTRP 111 (113)
T ss_dssp CSSCBCCC-CCCCEECCC
T ss_pred CCCcCCCC-eeeEEEeCC
Confidence 99998875 344556655
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=4e-11 Score=81.92 Aligned_cols=94 Identities=20% Similarity=0.231 Sum_probs=68.9
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC----CCcccEEEEEEECCCC-CCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS----GKYSGFKLKVISLSEK-TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~----~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
.+.||.+|.+..++.+++.|+|++|.. .....|.+.++..... .+........... .+.|.+|.|++.|.|+|+
T Consensus 2 rl~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~rVr 80 (104)
T d2b5ib2 2 RLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQE-WICLETLTPDTQYEFQVR 80 (104)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCC-EEEECSCCTTCEEEEEEE
T ss_pred ccCCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcE-EEEECCCCCCCEEEEEEE
Confidence 467999999999999999999998762 2235688888776543 2223344445555 899999999999999999
Q ss_pred EEeCCCC----cccceeeeeccCC
Q psy4956 164 SVYDSKE----SVAYTSRNFTTKP 183 (361)
Q Consensus 164 a~~~~~~----s~~~~~~~~~t~p 183 (361)
|.+..|. |..+....++|.|
T Consensus 81 a~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 81 VKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEECCCCCCCCCCCcCCEEEECCC
Confidence 9986653 3344455666654
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=4.7e-11 Score=82.01 Aligned_cols=91 Identities=18% Similarity=0.280 Sum_probs=67.2
Q ss_pred CCCCCCccE-EEEEeCCEEEEEeeCCC-C--CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEE
Q psy4956 89 PPDPPTNLS-VNVRSGKTAQIFWSPPI-S--GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFS 164 (361)
Q Consensus 89 ~~~~p~~l~-~~~~~~~~v~l~W~~p~-~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a 164 (361)
.|.+|.++. +...+.+++.|+|.+|. + ..+.+|.++++..+...+... ....... .+.+.+|.|++.|.|+|+|
T Consensus 10 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~-~~~~~~~-~~~i~~L~p~t~Y~~rV~A 87 (107)
T d2crma1 10 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEM-IYSGATR-EHLCDRLNPGCFYRLRVYC 87 (107)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEE-EECSSCS-EEEECSCCTTSCEEEEEEE
T ss_pred CCcCCCCCEEEeeecCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEE-eecCCcc-EEEEeccCCCCEEEEEEEE
Confidence 366676644 44568899999999876 2 257889999987655444333 3344455 8999999999999999999
Q ss_pred EeCCCCcccceeeeecc
Q psy4956 165 VYDSKESVAYTSRNFTT 181 (361)
Q Consensus 165 ~~~~~~s~~~~~~~~~t 181 (361)
.+..|.|.++....++|
T Consensus 88 ~n~~G~s~~S~~v~v~T 104 (107)
T d2crma1 88 ISDGGQSAVSESLLVQT 104 (107)
T ss_dssp EETTEECCCCCCCCCCC
T ss_pred ECCCcCcCCCCcEEEEC
Confidence 99999887655555544
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.26 E-value=1.1e-11 Score=87.13 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=68.0
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCC---CCcccEEEEEEECC--CCCCCeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPIS---GKYSGFKLKVISLS--EKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~---~~~~~y~v~~~~~~--~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
+++.+|.++.+..++.++|.|+|++|.. ..+.+|.|+|+... ..............+ .+.|.+|.|++.|.|+|
T Consensus 14 ~pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~~~~-~~~v~~L~p~t~Y~frV 92 (120)
T d1wfua_ 14 VPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYAT-RHVVEGLEPRTLYKFRL 92 (120)
T ss_dssp CCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCS-EEEEESCCTTCEEEEEE
T ss_pred cCCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeecccccc-EEeCCCCCCCcEeeEEE
Confidence 4577777788888899999999998762 24678888776421 112222222334455 89999999999999999
Q ss_pred EEEeCCCCcccceeeeeccC
Q psy4956 163 FSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t~ 182 (361)
+|.+..|.+..+....++|.
T Consensus 93 ~A~n~~G~s~~S~~~~~~T~ 112 (120)
T d1wfua_ 93 KVTSPSGEYEYSPVVSVATT 112 (120)
T ss_dssp EEECSSSCEEECCCEEEECC
T ss_pred EEEeCCcEeCCCCCEEEEeC
Confidence 99999998876555556554
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=2.3e-11 Score=81.40 Aligned_cols=76 Identities=14% Similarity=0.205 Sum_probs=60.7
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKT 356 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 356 (361)
.|.+|.+|.+ ..++.+++.|+|++|.. +.+..|+|+|...+.... . .......+.+++.+ |.|++.|.|+|+|
T Consensus 2 ~P~~P~nl~v--~~~~~~~v~l~W~~p~~-~~~~~y~v~y~~~~~~~~--~-~~~~~~~~~~~~~~-L~p~t~Y~frVRa 74 (95)
T d2b5ic1 2 IPWAPENLTL--HKLSESQLELNWNNRFL-NHCLEHLVQYRTDWDHSW--T-EQSVDYRHKFSLPS-VDGQKRYTFRVRS 74 (95)
T ss_dssp ECCCCEEEEE--EEEETTEEEEEEECSSC-STTCEEEEEEEETTCSSC--E-EEEECSSCEEEECS-CCTTSCEEEEEEE
T ss_pred CCcCCCCCEE--EEEeCCEEEEEECCCCC-ceeEEEEEEEEcCCCcee--e-EeeecccceeEcCC-CCCCCEEEEEEEE
Confidence 4889999999 88899999999999764 367889999998865322 2 22234567899986 9999999999999
Q ss_pred EeC
Q psy4956 357 VSG 359 (361)
Q Consensus 357 ~~~ 359 (361)
...
T Consensus 75 ~~~ 77 (95)
T d2b5ic1 75 RFN 77 (95)
T ss_dssp ECC
T ss_pred eeC
Confidence 753
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=4.7e-11 Score=82.65 Aligned_cols=92 Identities=20% Similarity=0.271 Sum_probs=69.8
Q ss_pred CCCCCccEEEEE--eCCEEEEEeeCCC--CCCcccEEEEEEECCCCCC--CeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 90 PDPPTNLSVNVR--SGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTP--PRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 90 ~~~p~~l~~~~~--~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
..||.++.+... +.+++.|+|++|. ++.+.+|.+.|+......+ .....+..... .+.|.+|.|++.|.|+|+
T Consensus 12 ~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~ 90 (111)
T d1x5ka1 12 TSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRL-THQIQELTLDTPYYFKIQ 90 (111)
T ss_dssp CSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEEESTTCS-EEEECSCCSSSEEEEEEE
T ss_pred CCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEEeCCCee-EEEECCCCCCCEEEEEEE
Confidence 356777776653 5679999999877 5678999999887544322 33445556666 899999999999999999
Q ss_pred EEeCCCCcccceeeeeccC
Q psy4956 164 SVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t~ 182 (361)
|.+..|.|..+....++|.
T Consensus 91 A~n~~G~g~~S~~v~~~T~ 109 (111)
T d1x5ka1 91 ARNSKGMGPMSEAVQFRTP 109 (111)
T ss_dssp EECSSCBCCCCCCEEEECC
T ss_pred EEcCCCCcCCCCCEEEECC
Confidence 9999988876655666653
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.5e-11 Score=83.51 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=67.6
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-C-cceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-S-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.|.+|..+.+ ....+++.|.|++|... | .+.+|.|+|+..+...................+.+.+|.|++.|.|+|+
T Consensus 2 vP~~P~~~~~-~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~ 80 (101)
T d2haza1 2 TPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLA 80 (101)
T ss_dssp CCCCCEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEE
T ss_pred cCcCCccCEE-EeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeeecccceeEEEecCCCCCeEEEEEEE
Confidence 3677865555 45678899999987544 3 5899999999876655433322211112236799999999999999999
Q ss_pred EEeCCCCCCceE-EEEecCC
Q psy4956 260 TVSEDEISTPTT-AQYRTIP 278 (361)
Q Consensus 260 a~~~~~~s~~~~-~~~~t~~ 278 (361)
|.|..|.|.++. ..+.|.|
T Consensus 81 A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 81 ALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEETTEECCCCCCEEEECCC
T ss_pred EEeCCcCcCCCCceeEEeCC
Confidence 999988876554 4455554
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.8e-11 Score=83.09 Aligned_cols=90 Identities=14% Similarity=0.187 Sum_probs=68.5
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC------CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI------SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~------~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
+.||.++.+...+.+++.|+|++|. .+...+|.|.|+..+.... ....+..... .+.|.+|.|++.|.|+|+
T Consensus 2 ~~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~-~~~i~~L~p~t~Y~~~V~ 79 (100)
T d1x5ja1 2 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANT-KYKNANATTL-SYLVTGLKPNTLYEFSVM 79 (100)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSC-CCEECCBCSS-EEEEESCCTTCEECCEEE
T ss_pred CCCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcc-eeEecCCCcc-EEEECCCCCCCEEEEEEE
Confidence 4678999999999999999999864 1234678888876544333 3333444555 899999999999999999
Q ss_pred EEeCCCCcccceeeeecc
Q psy4956 164 SVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t 181 (361)
|.+..|.|..+....++|
T Consensus 80 a~n~~g~s~~S~~~~~~T 97 (100)
T d1x5ja1 80 VTKGRRSSTWSMTAHGTT 97 (100)
T ss_dssp EECSSCBCCCCCCCCEEC
T ss_pred EEeCCcCcCCCCeEEEEe
Confidence 999999887665555555
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=3.2e-11 Score=80.90 Aligned_cols=80 Identities=20% Similarity=0.397 Sum_probs=61.6
Q ss_pred EeCCEEEEEeeCCC-C-C-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccceee
Q psy4956 101 RSGKTAQIFWSPPI-S-G-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYTSR 177 (361)
Q Consensus 101 ~~~~~v~l~W~~p~-~-~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~~~ 177 (361)
...++|.|+|.+|. + + .+.+|+|+++..+...+.... ..... ++++.+|.|++.|.|+|+|.+..|.|.++...
T Consensus 14 ~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~--~~~~~-~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~ 90 (97)
T d2crza1 14 PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY--QGSEV-ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKC 90 (97)
T ss_dssp CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE--EESCS-EEEEESCCTTCEEEECCEEECSSCBCCCCCCE
T ss_pred eeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee--cCCce-EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCC
Confidence 45689999999876 2 3 588999999876554443332 33455 89999999999999999999999988876666
Q ss_pred eeccCC
Q psy4956 178 NFTTKP 183 (361)
Q Consensus 178 ~~~t~p 183 (361)
.++|.|
T Consensus 91 ~~~T~p 96 (97)
T d2crza1 91 DITTAP 96 (97)
T ss_dssp EEECCC
T ss_pred eEEeCc
Confidence 666654
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=4e-11 Score=81.99 Aligned_cols=86 Identities=13% Similarity=0.156 Sum_probs=67.4
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.|.+|.++.+...+.+++.|+|.++... +.+.+|.|+++............. .....+.+.+|.|++.|.|+|+|
T Consensus 10 ~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~----~~~~~~~~~~L~p~t~Y~frV~A 85 (105)
T d1x3da1 10 EPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM----GSQKQFKITKLSPAMGCKFRLSA 85 (105)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE----ESCSEEEEESCCTTCEEEEECCE
T ss_pred CCcCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec----CCccEEEecCCcCCcEEEEEEEE
Confidence 3778999999999999999999887533 678899999987655443222221 22478999999999999999999
Q ss_pred EeCCCCCCceE
Q psy4956 261 VSEDEISTPTT 271 (361)
Q Consensus 261 ~~~~~~s~~~~ 271 (361)
.|..|.|.++.
T Consensus 86 ~N~~G~s~~S~ 96 (105)
T d1x3da1 86 RNDYGTSGFSE 96 (105)
T ss_dssp EESSCBCCCCC
T ss_pred ECCCeEcCCCC
Confidence 99998876543
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=6.2e-11 Score=79.18 Aligned_cols=78 Identities=13% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|.+|.+|.+...+.+++.|+|++|..+....|+|+|+..+...+ +.... .... .+.|.+|.|++.|.|+|+|....
T Consensus 2 ~P~~P~nl~v~~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~-~~~~~-~~~~-~~~~~~L~p~t~Y~frVRa~~~~ 78 (95)
T d2b5ic1 2 IPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSW-TEQSV-DYRH-KFSLPSVDGQKRYTFRVRSRFNP 78 (95)
T ss_dssp ECCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSC-EEEEE-CSSC-EEEECSCCTTSCEEEEEEEECCS
T ss_pred CCcCCCCCEEEEEeCCEEEEEECCCCCceeEEEEEEEEcCCCcee-eEeee-cccc-eeEcCCCCCCCEEEEEEEEeeCC
Confidence 488999999999999999999999887778899999998765433 33333 3345 89999999999999999998654
Q ss_pred C
Q psy4956 169 K 169 (361)
Q Consensus 169 ~ 169 (361)
+
T Consensus 79 ~ 79 (95)
T d2b5ic1 79 L 79 (95)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=3.1e-11 Score=82.46 Aligned_cols=79 Identities=18% Similarity=0.129 Sum_probs=61.4
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCC--CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPK--GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~--~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 354 (361)
.|.+|.++.+ ..++.++|.|+|++|. +...+.+|.+++.....+.... ........+.+++.+ |+|++.|.|+|
T Consensus 2 Pp~pP~~p~~--~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~-L~p~t~Y~frV 77 (104)
T d1bpva_ 2 PIDPPGKPVP--LNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLK-ANFSNILENEFTVSG-LTEDAAYEFRV 77 (104)
T ss_dssp CCCCCCCCEE--EEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEE-CCCSCCCSSEEEECS-CCSSCCEEEEE
T ss_pred CCCCCCCCEE--EEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeE-EEeeccceeEEEEcC-CCCCCEEEEEE
Confidence 4678899998 8889999999999863 3346899999999876543322 222345667899986 99999999999
Q ss_pred EEEeC
Q psy4956 355 KTVSG 359 (361)
Q Consensus 355 ~a~~~ 359 (361)
+|++.
T Consensus 78 ~A~n~ 82 (104)
T d1bpva_ 78 IAKNA 82 (104)
T ss_dssp EEECT
T ss_pred EEEEC
Confidence 99975
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1.7e-11 Score=84.97 Aligned_cols=85 Identities=16% Similarity=0.187 Sum_probs=66.1
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCC---e--EEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPP---R--IIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~---~--~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
.|.+|.++.+...+.+++.|+|++|.+ +.+.+|.|+|+......+. . ......... .+.|.+|.|++.|.|+
T Consensus 10 ~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~L~p~t~Y~fr 88 (111)
T d1wisa1 10 LPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDAR-SMEVPDLNPFTCYSFR 88 (111)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCS-EEEECSCCTTSEECCC
T ss_pred CCcCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeeeccccee-EEEeCCCCCCCEEEEE
Confidence 477889999988899999999998873 5688999998765443221 1 222334444 8999999999999999
Q ss_pred EEEEeCCCCcccc
Q psy4956 162 LFSVYDSKESVAY 174 (361)
Q Consensus 162 v~a~~~~~~s~~~ 174 (361)
|+|.+..|.|.++
T Consensus 89 V~A~N~~G~s~~S 101 (111)
T d1wisa1 89 MRQVNIVGTSPPS 101 (111)
T ss_dssp CEEECSSCBCCCC
T ss_pred EEEEcCCcCCCCc
Confidence 9999999888654
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=99.22 E-value=7.9e-11 Score=80.46 Aligned_cols=85 Identities=14% Similarity=0.070 Sum_probs=65.0
Q ss_pred CCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.+|.++.+...+.++|.|+|+++. ..|.+.+|.|.|+..+.......... .....+++.|.+|.+++.|.|+|+|
T Consensus 6 ~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A 83 (105)
T d1cfba2 6 KNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNI--FDWRQNNIVIADQPTFVKYLIKVVA 83 (105)
T ss_dssp CCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEE--CCTTCCEEEECSCCSSCEEEEEEEE
T ss_pred CCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEEe--cCCCccEEEECCCCCCCEEEEEEEE
Confidence 468899999999999999998642 22688999999987654432221111 1344678999999999999999999
Q ss_pred EeCCCCCCce
Q psy4956 261 VSEDEISTPT 270 (361)
Q Consensus 261 ~~~~~~s~~~ 270 (361)
.|..|.|+++
T Consensus 84 ~N~~G~gp~S 93 (105)
T d1cfba2 84 INDRGESNVA 93 (105)
T ss_dssp EETTEECSSC
T ss_pred EeCCcCCCCC
Confidence 9999887544
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=7.4e-11 Score=79.10 Aligned_cols=80 Identities=15% Similarity=0.347 Sum_probs=61.3
Q ss_pred ccCCeEEEEeecCCCC-C-cceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE
Q psy4956 194 RNETTLLVLWQPSYPA-S-IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT 271 (361)
Q Consensus 194 ~~~~~~~v~W~~~~~~-~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~ 271 (361)
...++|.|+|++|..+ + .+.+|.|+++..+........... ..++.+.+|.|++.|.|+|+|.|..|.+.++.
T Consensus 14 ~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~-----~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~ 88 (97)
T d2crza1 14 PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGS-----EVECTVSSLLPGKTYSFRLRAANKMGFGPFSE 88 (97)
T ss_dssp CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEEES-----CSEEEEESCCTTCEEEECCEEECSSCBCCCCC
T ss_pred eeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEeecCC-----ceEEEEcCCCCCEEEEEEEEEecCCeEcCCcC
Confidence 4567999999977544 3 589999999987766655544433 37899999999999999999999999887653
Q ss_pred -EEEecCC
Q psy4956 272 -AQYRTIP 278 (361)
Q Consensus 272 -~~~~t~~ 278 (361)
..+.|.|
T Consensus 89 ~~~~~T~p 96 (97)
T d2crza1 89 KCDITTAP 96 (97)
T ss_dssp CEEEECCC
T ss_pred CCeEEeCc
Confidence 4455544
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=99.21 E-value=1.1e-10 Score=76.71 Aligned_cols=77 Identities=18% Similarity=0.292 Sum_probs=61.4
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
+|.+|.+|.+...+.+++.|+|+++...+.+.+|.|.+... ...... .+.+.+.+|.|++.|.|+|+|+
T Consensus 3 AP~~P~~l~~~~~~~~sv~lsW~~p~~~~~i~~Y~i~~~~~------~~~~~~-----~t~~~~~~L~p~t~Y~~~V~A~ 71 (88)
T d1k85a_ 3 APTAPTNLASTAQTTSSITLSWTASTDNVGVTGYDVYNGTA------LATTVT-----GTTATISGLAADTSYTFTVKAK 71 (88)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSCCSSEEEEEEEESSS------EEEEES-----SSEEEECCCCSSCEEEEEEEEE
T ss_pred CcCCCCCcEEEEecCCEEEEEEeCCCCCCCEEEEEEEccce------EEEecC-----CCEEEECCCCCCCEEEEEEEEE
Confidence 57899999999999999999999876666788999976431 111212 3789999999999999999999
Q ss_pred eCCC-CCCc
Q psy4956 262 SEDE-ISTP 269 (361)
Q Consensus 262 ~~~~-~s~~ 269 (361)
+..| .+.+
T Consensus 72 n~~G~~s~~ 80 (88)
T d1k85a_ 72 DAAGNVSAA 80 (88)
T ss_dssp ETTTEECCC
T ss_pred ECCCCcCCC
Confidence 9887 4544
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=5.2e-11 Score=82.42 Aligned_cols=89 Identities=16% Similarity=0.257 Sum_probs=67.5
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCce--eEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESV--LYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
.|.+|.++.+...+.+++.|+|+++... +.+.+|.|.+......... ..............+.+.+|.|++.|.|+|
T Consensus 10 ~P~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV 89 (111)
T d1wisa1 10 LPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRM 89 (111)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCC
T ss_pred CCcCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeeecccceeEEEeCCCCCCCEEEEEE
Confidence 3788999999999999999999977433 6788999999865443321 111122224556789999999999999999
Q ss_pred EEEeCCCCCCce
Q psy4956 259 QTVSEDEISTPT 270 (361)
Q Consensus 259 ~a~~~~~~s~~~ 270 (361)
+|.|..|.|.++
T Consensus 90 ~A~N~~G~s~~S 101 (111)
T d1wisa1 90 RQVNIVGTSPPS 101 (111)
T ss_dssp EEECSSCBCCCC
T ss_pred EEEcCCcCCCCc
Confidence 999998877554
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=3.7e-11 Score=82.60 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=60.5
Q ss_pred cCCCCCccceEEeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEE
Q psy4956 276 TIPLRPLSFTYDKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLV 354 (361)
Q Consensus 276 t~~~~p~~l~~~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 354 (361)
+.+.||+++.+ ..+.++|+|+|++|.. .+.+.+|.|+|+.... .+...........+.+.+.+ |+|++.|.|+|
T Consensus 6 s~~sPP~~~~~---~~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~~rV 80 (108)
T d1v5ja_ 6 SGLSPPRGLVA---VRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQ-GWEVLDPAVAGTETELLVPG-LIKDVLYEFRL 80 (108)
T ss_dssp CCCCCCEEEEE---EECSSSEEEEEECCSCCSSCCCBEEEEEEETTC-CCEEEEEEECSSCCEEECCC-CCTTSCEECCB
T ss_pred CCCCcCCCeEE---EEcCCEEEEEEEecccCCCceeEEEEEeeeeee-eeeeccccccceeeeEEEEe-ccCCcEEEEEE
Confidence 45678999987 4467899999999753 2578999999988754 22222233455678899986 99999999999
Q ss_pred EEEeCC
Q psy4956 355 KTVSGK 360 (361)
Q Consensus 355 ~a~~~~ 360 (361)
+|+++.
T Consensus 81 ~A~n~~ 86 (108)
T d1v5ja_ 81 VAFAGS 86 (108)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 999864
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=8.6e-11 Score=83.42 Aligned_cols=102 Identities=21% Similarity=0.247 Sum_probs=72.9
Q ss_pred eeccCCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 178 NFTTKPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 178 ~~~t~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.....|.+|.++++...+.+++.|+|+++... +.+..|.+.|............... ......+.+.+|.|++.|.|
T Consensus 12 ~v~d~P~~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~f 89 (127)
T d1ueya_ 12 PVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--VSGTQTTAQLNLSPYVNYSF 89 (127)
T ss_dssp CCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE--EESSCCEEEECCCTTCEECC
T ss_pred cccccCcCCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEee--cCCceEEEECCCccCCEEEE
Confidence 34456889999999999999999999977433 6678999999876544322111111 12246788999999999999
Q ss_pred EEEEEeCCCCCCceE--EEEecCCCCC
Q psy4956 257 SVQTVSEDEISTPTT--AQYRTIPLRP 281 (361)
Q Consensus 257 ~V~a~~~~~~s~~~~--~~~~t~~~~p 281 (361)
+|+|++..|.+.+.. ..+.+.+..|
T Consensus 90 rV~A~n~~G~s~~S~~s~~~~t~~~~P 116 (127)
T d1ueya_ 90 RVMAVNSIGKSLPSEASEQYLTKASEP 116 (127)
T ss_dssp EEEEEESSCBCCCCSCCCCEECCCSSC
T ss_pred EEEEEcCCcCcCCcCCcccEEcCCCCC
Confidence 999999988876543 2344555443
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.19 E-value=2.3e-10 Score=77.86 Aligned_cols=86 Identities=21% Similarity=0.246 Sum_probs=62.1
Q ss_pred CCCCCCccEEE----EEeCCEEEEEeeCCCCC------CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEE
Q psy4956 89 PPDPPTNLSVN----VRSGKTAQIFWSPPISG------KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSY 158 (361)
Q Consensus 89 ~~~~p~~l~~~----~~~~~~v~l~W~~p~~~------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 158 (361)
.|+||.++.+. ....+++.|+|++|... .+..|+|+|+..+...+.. ... ...+ .+.+.+|.|++.|
T Consensus 2 kP~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~-~~~-~~~~-~~~i~~L~p~t~Y 78 (103)
T d1f6fb2 2 EPEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEI-HFT-GHQT-QFKVFDLYPGQKY 78 (103)
T ss_dssp CCCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEE-EEE-ETCS-EEEECCCCTTCEE
T ss_pred CCCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceee-ecc-ccee-EEEeCCCCcceEE
Confidence 58899988775 23467899999998621 3468999999876544433 322 3445 8999999999999
Q ss_pred EEEEEEEeCCCC-cccceee
Q psy4956 159 QVQLFSVYDSKE-SVAYTSR 177 (361)
Q Consensus 159 ~v~v~a~~~~~~-s~~~~~~ 177 (361)
.|+|+|.+..|. |..+...
T Consensus 79 ~~rVra~~~~G~wS~wS~~~ 98 (103)
T d1f6fb2 79 LVQTRCKPDHGYWSRWSQES 98 (103)
T ss_dssp EEEEEEEESSSCCCCCCCCE
T ss_pred EEEEEEEeCCCCCCCCcCce
Confidence 999999998775 5544333
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=1.4e-10 Score=79.05 Aligned_cols=82 Identities=21% Similarity=0.203 Sum_probs=64.5
Q ss_pred CCCCCCccEEEEEe--CCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNVRS--GKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~~~--~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
.|+||.++.+..+. +..+.|+|++|. .+.+..|+|+|+..+.. ......+..... .+.|.+|.|++.|.|+|
T Consensus 1 kP~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~-~~~i~~L~p~t~Y~~rV 78 (104)
T d1n26a3 1 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSK-TFTTWMVKDLQH-HCVIHDAWSGLRHVVQL 78 (104)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCS-CCEEEECGGGCS-EEEESSCCTTCCEEEEE
T ss_pred CCcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCC-ceeeeccccceE-EEEECCCCCCCEEEEEE
Confidence 48899999988764 568999999875 23467899999987654 344455555666 89999999999999999
Q ss_pred EEEeCCCCcc
Q psy4956 163 FSVYDSKESV 172 (361)
Q Consensus 163 ~a~~~~~~s~ 172 (361)
+|.+..|.+.
T Consensus 79 ra~n~~g~g~ 88 (104)
T d1n26a3 79 RAQEEFGQGE 88 (104)
T ss_dssp EEEETTTBSC
T ss_pred EEEeCCCccC
Confidence 9999877654
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.18 E-value=1.6e-10 Score=78.27 Aligned_cols=94 Identities=18% Similarity=0.144 Sum_probs=68.4
Q ss_pred CCCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
+.+|.++.+...+.+++.|.|+++. ..+.+.+|.|.|+..+.......... ........+.+.+|.|++.|.|+|+
T Consensus 2 ~~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~v~ 80 (101)
T d1x4ya1 2 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD-MVEGDRYWHSISHLQPETSYDIKMQ 80 (101)
T ss_dssp CSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE-EEETTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEE-EEcCCeeEEEEcCCCCCCEEEEEEE
Confidence 4579999999999999999997542 22788999999997655432211110 0123347899999999999999999
Q ss_pred EEeCCCCCCceE-EEEecC
Q psy4956 260 TVSEDEISTPTT-AQYRTI 277 (361)
Q Consensus 260 a~~~~~~s~~~~-~~~~t~ 277 (361)
|++..|.++.+. +.+.|.
T Consensus 81 a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 81 CFNEGGESEFSNVMICETK 99 (101)
T ss_dssp EECTTCCCCCCCCEEEECC
T ss_pred EEcCCCCCCCCCcEEEEcc
Confidence 999998876554 344443
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=6.8e-11 Score=82.87 Aligned_cols=95 Identities=20% Similarity=0.309 Sum_probs=70.0
Q ss_pred C-CCCcceEEEeccCCeEEEEeecCC---CCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 183 P-NTPGKFIVWFRNETTLLVLWQPSY---PASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 183 p-~~p~~l~~~~~~~~~~~v~W~~~~---~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
| .+|.++.+...+.+++.|+|+++. ..|.+.+|.|.|+..+.... ...........++.|.+|.|++.|.|+|
T Consensus 11 P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 87 (119)
T d1x5ha1 11 PSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSD---VTETLVSGTQLSQLIEGLDRGTEYNFRV 87 (119)
T ss_dssp CCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEE---EECCBCCTTCCEEEEECCCSSCEEEEEC
T ss_pred CCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccccc---eeeeecCCCccEEEeCCCCCCCEEEEEE
Confidence 5 368999999999999999998763 22678999999987654221 1111224456889999999999999999
Q ss_pred EEEeCCCCCCce-EEEEecCCCC
Q psy4956 259 QTVSEDEISTPT-TAQYRTIPLR 280 (361)
Q Consensus 259 ~a~~~~~~s~~~-~~~~~t~~~~ 280 (361)
+|.+..|.|..+ .+.+.|.+..
T Consensus 88 ~A~n~~G~G~~S~~~~~~T~~~~ 110 (119)
T d1x5ha1 88 AALTINGTGPATDWLSAETFESD 110 (119)
T ss_dssp EEEETTEEEEECCCEEEECCSSC
T ss_pred EEEcCCcCCCCCCCEEEEeCCCC
Confidence 999998876543 3456665433
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.18 E-value=6.7e-11 Score=81.11 Aligned_cols=82 Identities=20% Similarity=0.327 Sum_probs=57.3
Q ss_pred CCCccEEEEEeCCEEEEEeeCCCC--CCcccEEEEEEECCCCCCCeEE--eec----------CCCCceEEEcCCCCCcE
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPIS--GKYSGFKLKVISLSEKTPPRII--GFT----------ENPPAGYSLKDLTPGGS 157 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~~--~~~~~y~v~~~~~~~~~~~~~~--~~~----------~~~~~~~~l~~L~p~~~ 157 (361)
||..+.+..++.+++.|+|.+|.+ +++.+|.|+|+..+........ ... ... ..++|.+|.|++.
T Consensus 2 PP~~p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~L~p~t~ 80 (107)
T d2ic2a1 2 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKS-FTASVTDLKPQHT 80 (107)
T ss_dssp CCCCCEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEE-EEEEECSCCSSEE
T ss_pred cCcCCEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccce-eEEEECCCcCCcE
Confidence 566677888899999999999873 5689999999876543222211 110 111 3799999999999
Q ss_pred EEEEEEEEeCCCCcccc
Q psy4956 158 YQVQLFSVYDSKESVAY 174 (361)
Q Consensus 158 Y~v~v~a~~~~~~s~~~ 174 (361)
|.|+|+|.|..|.|..+
T Consensus 81 Y~frV~A~N~~G~s~~S 97 (107)
T d2ic2a1 81 YRFRILAVYSNNDNKES 97 (107)
T ss_dssp EEEEEEEEETTSCEEEC
T ss_pred EEEEEEEEcCCCCCCCC
Confidence 99999999999988653
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=1.2e-10 Score=79.82 Aligned_cols=85 Identities=16% Similarity=0.239 Sum_probs=62.7
Q ss_pred CCCCcce-EEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 183 PNTPGKF-IVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 183 p~~p~~l-~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
|.+|.++ .+...+.+++.|+|++|... ..+..|.++++............ ....+.+.+.+|+|++.|.|+|+
T Consensus 11 P~~P~~~~~~~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~rV~ 86 (107)
T d2crma1 11 PGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY----SGATREHLCDRLNPGCFYRLRVY 86 (107)
T ss_dssp CCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE----CSSCSEEEECSCCTTSCEEEEEE
T ss_pred CcCCCCCEEEeeecCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEee----cCCccEEEEeccCCCCEEEEEEE
Confidence 6667664 44556889999999977544 35789999998665544332222 22357899999999999999999
Q ss_pred EEeCCCCCCceE
Q psy4956 260 TVSEDEISTPTT 271 (361)
Q Consensus 260 a~~~~~~s~~~~ 271 (361)
|.|..|.|.++.
T Consensus 87 A~n~~G~s~~S~ 98 (107)
T d2crma1 87 CISDGGQSAVSE 98 (107)
T ss_dssp EEETTEECCCCC
T ss_pred EECCCcCcCCCC
Confidence 999998776654
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.15 E-value=5.1e-10 Score=76.05 Aligned_cols=80 Identities=20% Similarity=0.351 Sum_probs=60.7
Q ss_pred CCCCCcceEEE----eccCCeEEEEeecCCCC-----CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCC
Q psy4956 182 KPNTPGKFIVW----FRNETTLLVLWQPSYPA-----SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252 (361)
Q Consensus 182 ~p~~p~~l~~~----~~~~~~~~v~W~~~~~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t 252 (361)
+|.||.+|.+. ....+++.|+|++|... +.+..|.|.++..+........... .+.+.+.+|.+++
T Consensus 2 kP~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~~-----~~~~~i~~L~p~t 76 (103)
T d1f6fb2 2 EPEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTGH-----QTQFKVFDLYPGQ 76 (103)
T ss_dssp CCCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEET-----CSEEEECCCCTTC
T ss_pred CCCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeecccc-----eeEEEeCCCCcce
Confidence 47899998875 34556799999987431 3556999999987766654433322 4789999999999
Q ss_pred eEEEEEEEEeCCCC
Q psy4956 253 AYNISVQTVSEDEI 266 (361)
Q Consensus 253 ~Y~v~V~a~~~~~~ 266 (361)
.|.|+|+|.+..|.
T Consensus 77 ~Y~~rVra~~~~G~ 90 (103)
T d1f6fb2 77 KYLVQTRCKPDHGY 90 (103)
T ss_dssp EEEEEEEEEESSSC
T ss_pred EEEEEEEEEeCCCC
Confidence 99999999998774
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.15 E-value=7e-11 Score=83.29 Aligned_cols=93 Identities=13% Similarity=0.196 Sum_probs=68.1
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCe------E---------EeecCCCCceEEEc
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPR------I---------IGFTENPPAGYSLK 150 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~------~---------~~~~~~~~~~~~l~ 150 (361)
..|.+|.++.+.. +.+++.|+|++|. ++.+.+|.|+|+......... . ..+..... .+.+.
T Consensus 6 ~~P~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~ 83 (123)
T d1wfta_ 6 SGPGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQL-ANAHI 83 (123)
T ss_dssp SCCCCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHH-TTCCC
T ss_pred CCCcCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCcc-EEEEc
Confidence 4688899998865 6789999999876 568999999998754432110 0 11122222 56778
Q ss_pred CCCCCcEEEEEEEEEeCCCCcccceeeeeccC
Q psy4956 151 DLTPGGSYQVQLFSVYDSKESVAYTSRNFTTK 182 (361)
Q Consensus 151 ~L~p~~~Y~v~v~a~~~~~~s~~~~~~~~~t~ 182 (361)
+|.|++.|.|+|+|.|..|.+..+....+++.
T Consensus 84 ~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~ 115 (123)
T d1wfta_ 84 DYTSRPAIVFRISAKNEKGYGPATQIRWLQGN 115 (123)
T ss_dssp BCSSSCEEEEEEEEBSSSSBCCCEEEEEECCS
T ss_pred CCCCCCEEEEEEEEecCCcCCCCCCcEEEEec
Confidence 99999999999999999999876555556654
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=1.8e-10 Score=78.62 Aligned_cols=80 Identities=13% Similarity=0.072 Sum_probs=56.3
Q ss_pred CCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCe-EEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPR-IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|..+.+...+.+++.|+|.+|. .+.+.+|.|.|+...+..... ......... .+.|.+|.|++.|.|+|+|.+..
T Consensus 9 ~P~~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~~~~~~~-~~~i~~L~p~t~Y~frVra~n~~ 87 (105)
T d2d9qb2 9 MDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEAL-QYELCGLLPATAYTLQIRCIRWP 87 (105)
T ss_dssp CCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEECSCEE-EEEECSCCSCCCEEEEEEEEECS
T ss_pred CCCCCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeecccCCcc-eeEEecccCCeEEEEEEEEEeCC
Confidence 45566677778999999999976 455778999999865443333 333444444 89999999999999999999988
Q ss_pred CCcc
Q psy4956 169 KESV 172 (361)
Q Consensus 169 ~~s~ 172 (361)
|.+.
T Consensus 88 g~G~ 91 (105)
T d2d9qb2 88 LPGH 91 (105)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7753
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=3.1e-10 Score=78.39 Aligned_cols=92 Identities=18% Similarity=0.230 Sum_probs=65.4
Q ss_pred CCCcceEEEe--ccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 184 NTPGKFIVWF--RNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 184 ~~p~~l~~~~--~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.||.++.+.. .+.+++.|+|++|.. .+.+.+|.+.|.............. ......+.+.|.+|.|++.|.|+|+|
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~A 91 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE-PVVGNRLTHQIQELTLDTPYYFKIQA 91 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEE-EESTTCSEEEECSCCSSSEEEEEEEE
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEE-EeCCCeeEEEECCCCCCCEEEEEEEE
Confidence 4677888764 456789999987643 3788999999987655432111111 11344578999999999999999999
Q ss_pred EeCCCCCCceE-EEEec
Q psy4956 261 VSEDEISTPTT-AQYRT 276 (361)
Q Consensus 261 ~~~~~~s~~~~-~~~~t 276 (361)
.|..|.|..+. +.+.|
T Consensus 92 ~n~~G~g~~S~~v~~~T 108 (111)
T d1x5ka1 92 RNSKGMGPMSEAVQFRT 108 (111)
T ss_dssp ECSSCBCCCCCCEEEEC
T ss_pred EcCCCCcCCCCCEEEEC
Confidence 99988876654 34444
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=1.3e-10 Score=81.01 Aligned_cols=104 Identities=24% Similarity=0.275 Sum_probs=68.4
Q ss_pred cccceeeeeccC---CCCCcceEEEeccCCeEEEEeecCCC---CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEE
Q psy4956 171 SVAYTSRNFTTK---PNTPGKFIVWFRNETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAA 244 (361)
Q Consensus 171 s~~~~~~~~~t~---p~~p~~l~~~~~~~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (361)
|..+....++|. |..|..+.+...+.+++.|.|+++.. .+.+.+|.|.|+..+...... ... ...+.
T Consensus 3 s~~S~~v~v~T~~~~P~~pp~~~~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~-~~~------~~~~~ 75 (117)
T d1wj3a_ 3 SGSSGTVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV-LNT------NKTSA 75 (117)
T ss_dssp CCCCCCCCCCCSCCCCCCCCCSCBCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEE-EEE------SSSEE
T ss_pred CCCCCCEEEEcCCCCcCCCCcceEEeecCCEEEEEEeecccccCCCceeEEEEEEEecCCCceee-eec------eeeEE
Confidence 333344555555 44333444555678899999986432 268899999998766544433 222 24567
Q ss_pred ecCCCCCCeEEEEEEEEeCCCCCCceE-E-EEecCCCCC
Q psy4956 245 FKGLVPGRAYNISVQTVSEDEISTPTT-A-QYRTIPLRP 281 (361)
Q Consensus 245 ~~~L~p~t~Y~v~V~a~~~~~~s~~~~-~-~~~t~~~~p 281 (361)
+.+|.+++.|.|+|+|.|..|.+..+. + ...+.+.+|
T Consensus 76 ~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~~~~~P 114 (117)
T d1wj3a_ 76 ELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGP 114 (117)
T ss_dssp EEECCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCS
T ss_pred EeeccCCcEEEEEEEEEcCCccCCCCCCEEEeccCCCCC
Confidence 778999999999999999998876553 2 234444445
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=9.2e-11 Score=79.57 Aligned_cols=84 Identities=21% Similarity=0.311 Sum_probs=54.8
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCC-----CcccEEEEEEECCCCCCCeEEeecCCCC-ceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISG-----KYSGFKLKVISLSEKTPPRIIGFTENPP-AGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~-----~~~~y~v~~~~~~~~~~~~~~~~~~~~~-~~~~l~~L~p~~~Y~v~v 162 (361)
+|.+|.+|.+...+++++.|+|.+|... ....|.|+|+..+...+.....+..... ..+.+.+|.|++.|.|+|
T Consensus 1 kP~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV 80 (101)
T d1iarb2 1 KPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARV 80 (101)
T ss_dssp CCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEEE
T ss_pred CcccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCccceEEEECCCCCCCEEEEEE
Confidence 4889999999999999999999987521 1235999998876554544444433332 368888999999999999
Q ss_pred EEEeCCCCcc
Q psy4956 163 FSVYDSKESV 172 (361)
Q Consensus 163 ~a~~~~~~s~ 172 (361)
+|.+..|.+.
T Consensus 81 rA~~~~g~g~ 90 (101)
T d1iarb2 81 RAWAQAYNTT 90 (101)
T ss_dssp EEECGGGTCC
T ss_pred EEEcCCCCCC
Confidence 9998776654
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=4e-10 Score=76.80 Aligned_cols=80 Identities=11% Similarity=0.221 Sum_probs=61.1
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCC---CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGF---SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~---~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 353 (361)
.+.||.+|++ ..++.+++.|+|.+|... .....|++++...+...............+.+.+.+ |+|++.|.|+
T Consensus 2 rl~pP~~l~v--~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~~r 78 (104)
T d2b5ib2 2 RLMAPISLQV--VHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLET-LTPDTQYEFQ 78 (104)
T ss_dssp CCCCCEEEEE--EEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECS-CCTTCEEEEE
T ss_pred ccCCCCCcEE--EEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcEEEEECC-CCCCCEEEEE
Confidence 4679999999 899999999999987432 345678999887764322233334455677899986 9999999999
Q ss_pred EEEEeC
Q psy4956 354 VKTVSG 359 (361)
Q Consensus 354 V~a~~~ 359 (361)
|+|.+.
T Consensus 79 Vra~~~ 84 (104)
T d2b5ib2 79 VRVKPL 84 (104)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999854
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.12 E-value=1.5e-10 Score=79.28 Aligned_cols=86 Identities=13% Similarity=0.119 Sum_probs=57.6
Q ss_pred CCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCC-ceeEEee--------ccCCCCCcEEEecCCCCCCeE
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPE-SVLYVEK--------EGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~L~p~t~Y 254 (361)
||..+.+...+.+++.|+|.++... +.+.+|.|+|+..+... +...... .........+.+.+|+|++.|
T Consensus 2 PP~~p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 81 (107)
T d2ic2a1 2 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY 81 (107)
T ss_dssp CCCCCEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEE
T ss_pred cCcCCEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEE
Confidence 5667778888999999999887533 67899999997654322 1111110 011222357899999999999
Q ss_pred EEEEEEEeCCCCCCce
Q psy4956 255 NISVQTVSEDEISTPT 270 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~ 270 (361)
.|+|.|.|..|.|.++
T Consensus 82 ~frV~A~N~~G~s~~S 97 (107)
T d2ic2a1 82 RFRILAVYSNNDNKES 97 (107)
T ss_dssp EEEEEEEETTSCEEEC
T ss_pred EEEEEEEcCCCCCCCC
Confidence 9999999999887543
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=3.8e-10 Score=78.79 Aligned_cols=82 Identities=13% Similarity=0.204 Sum_probs=62.4
Q ss_pred EeCCEEEEEeeCCC-CCCcccEEEEEEECCCC---CCCeEEeec-CCCCceEEEcCCCCCcEEEEEEEEEeCCCCcccce
Q psy4956 101 RSGKTAQIFWSPPI-SGKYSGFKLKVISLSEK---TPPRIIGFT-ENPPAGYSLKDLTPGGSYQVQLFSVYDSKESVAYT 175 (361)
Q Consensus 101 ~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~---~~~~~~~~~-~~~~~~~~l~~L~p~~~Y~v~v~a~~~~~~s~~~~ 175 (361)
+++++|.|+|++|. ++.+.+|+|.|+..+.. .......+. .... ++.|.+|.|++.|.|+|+|.+..|.+..+.
T Consensus 27 ~s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~-s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~ 105 (120)
T d1ujta_ 27 LTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTER-SAVLVNLKKGVTYEIKVRPYFNEFQGMDSE 105 (120)
T ss_dssp CBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCC-EEEEESCCSSEEEEEEEEEESSSCCCCCCC
T ss_pred eCCCeEEEEecCCCCCCcEEEEEEEeeecccCCCCcceEEEEeccCcee-EEEECCCCCCCEEEEEEEEEeCCcCcCCCC
Confidence 57899999999875 45788999999886433 222333443 3344 899999999999999999999999887766
Q ss_pred eeeeccCC
Q psy4956 176 SRNFTTKP 183 (361)
Q Consensus 176 ~~~~~t~p 183 (361)
...++|.+
T Consensus 106 ~~~~~T~e 113 (120)
T d1ujta_ 106 SKTVRTTE 113 (120)
T ss_dssp CEEEEECS
T ss_pred CEEEEeCC
Confidence 66666654
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=3.6e-10 Score=78.73 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=66.5
Q ss_pred eEEEecC---CCCCCccEEEEEeCCEEEEEeeCCC----CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCC
Q psy4956 83 TASITTP---PDPPTNLSVNVRSGKTAQIFWSPPI----SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPG 155 (361)
Q Consensus 83 ~~~~~t~---~~~p~~l~~~~~~~~~v~l~W~~p~----~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 155 (361)
.+.++|. |..|..+.+...+.+.+.|+|+++. ++.+.+|+|+|+..+.. ...... ... .+.+.+|.|+
T Consensus 8 ~v~v~T~~~~P~~pp~~~~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~-~~~~~~---~~~-~~~~~~L~p~ 82 (117)
T d1wj3a_ 8 TVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQN-NVQVLN---TNK-TSAELVLPIK 82 (117)
T ss_dssp CCCCCCSCCCCCCCCCSCBCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCS-SCEEEE---ESS-SEEEEECCCS
T ss_pred CEEEEcCCCCcCCCCcceEEeecCCEEEEEEeecccccCCCceeEEEEEEEecCCC-ceeeee---cee-eEEEeeccCC
Confidence 4455453 4433444455677899999998754 46788999999876532 222222 233 6777899999
Q ss_pred cEEEEEEEEEeCCCCcccceeeee-ccCCCCC
Q psy4956 156 GSYQVQLFSVYDSKESVAYTSRNF-TTKPNTP 186 (361)
Q Consensus 156 ~~Y~v~v~a~~~~~~s~~~~~~~~-~t~p~~p 186 (361)
+.|.|+|+|.+..|.+..+....+ ++.+..|
T Consensus 83 t~Y~~~V~A~n~~G~G~~S~~v~v~~~~~~~P 114 (117)
T d1wj3a_ 83 EDYIIEVKATTDGGDGTSSEQIRIPRITSSGP 114 (117)
T ss_dssp SCEEEEEEEEESSCCCCBCCCEEECCCCCCCS
T ss_pred cEEEEEEEEEcCCccCCCCCCEEEeccCCCCC
Confidence 999999999999998876544444 4444444
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=2e-10 Score=79.91 Aligned_cols=100 Identities=21% Similarity=0.229 Sum_probs=70.3
Q ss_pred cCCCCCcceEEEe--ccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 181 TKPNTPGKFIVWF--RNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 181 t~p~~p~~l~~~~--~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
.+|.+|.++.+.. .+.++|.|+|.++.. .+.+.+|.|+|+...+...... .........+.+.|.+|.+++.|.|+
T Consensus 3 vkP~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~~~t~Y~~~ 81 (115)
T d1bqua2 3 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI-PPEDTASTRSSFTVQDLKPFTEYVFR 81 (115)
T ss_dssp EECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC-CGGGGCSCCSEEEECSCCSSEEEEEE
T ss_pred eECCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecc-ccccccccccEEeeCCCccCcEEEEE
Confidence 4578899988874 456789999987643 3678899999997665553321 22222455688999999999999999
Q ss_pred EEEEeCCCCCCc----eEEEEecCCCCC
Q psy4956 258 VQTVSEDEISTP----TTAQYRTIPLRP 281 (361)
Q Consensus 258 V~a~~~~~~s~~----~~~~~~t~~~~p 281 (361)
|+|.+..|.+.. ....+.|...+|
T Consensus 82 V~a~~~~G~g~~S~~S~~~~~~T~~~~P 109 (115)
T d1bqua2 82 IRCMKEDGKGYWSDWSEEASGITYEDRP 109 (115)
T ss_dssp EEEEETTSCSCCCCCCCCEEEEECCCHH
T ss_pred EEEEeCCCccCCcCCcCCEEEECCCCCC
Confidence 999998876532 234555544433
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=9.1e-11 Score=81.70 Aligned_cols=94 Identities=18% Similarity=0.254 Sum_probs=67.2
Q ss_pred cCCCCCCccEEEE--EeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeEE--eecCCCCceEEEcCCCCCcEEEEE
Q psy4956 88 TPPDPPTNLSVNV--RSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRII--GFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 88 t~~~~p~~l~~~~--~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
..|+||.++.+.. .+.+++.|+|++|. ++.+.+|.|+|+...+..+.... ......+ .+.|.+|.+++.|.|+
T Consensus 3 vkP~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~-~~~i~~L~~~t~Y~~~ 81 (115)
T d1bqua2 3 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRS-SFTVQDLKPFTEYVFR 81 (115)
T ss_dssp EECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCS-EEEECSCCSSEEEEEE
T ss_pred eECCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecccccccccccc-EEeeCCCccCcEEEEE
Confidence 4578998887764 45788999999876 56688999999987654432211 2223444 8999999999999999
Q ss_pred EEEEeCCCCcc---cceeeeeccC
Q psy4956 162 LFSVYDSKESV---AYTSRNFTTK 182 (361)
Q Consensus 162 v~a~~~~~~s~---~~~~~~~~t~ 182 (361)
|+|.+..|.+. ++....++|.
T Consensus 82 V~a~~~~G~g~~S~~S~~~~~~T~ 105 (115)
T d1bqua2 82 IRCMKEDGKGYWSDWSEEASGITY 105 (115)
T ss_dssp EEEEETTSCSCCCCCCCCEEEEEC
T ss_pred EEEEeCCCccCCcCCcCCEEEECC
Confidence 99999877653 2233445554
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=3.1e-10 Score=76.74 Aligned_cols=84 Identities=15% Similarity=0.118 Sum_probs=63.8
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCC-----CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPA-----SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISV 258 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V 258 (361)
.||.++.+...+.++|.|+|+++... +.+.+|.|.+...+......... ......+.|.||.|++.|.|+|
T Consensus 3 ~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V 78 (100)
T d1x5ja1 3 MPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA----NATTLSYLVTGLKPNTLYEFSV 78 (100)
T ss_dssp CCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEEC----CBCSSEEEEESCCTTCEECCEE
T ss_pred CCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEec----CCCccEEEECCCCCCCEEEEEE
Confidence 57899999999999999999865321 45568999988765544322221 2234789999999999999999
Q ss_pred EEEeCCCCCCceE
Q psy4956 259 QTVSEDEISTPTT 271 (361)
Q Consensus 259 ~a~~~~~~s~~~~ 271 (361)
+|.+..|.|..+.
T Consensus 79 ~a~n~~g~s~~S~ 91 (100)
T d1x5ja1 79 MVTKGRRSSTWSM 91 (100)
T ss_dssp EEECSSCBCCCCC
T ss_pred EEEeCCcCcCCCC
Confidence 9999988875544
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=5.5e-10 Score=76.09 Aligned_cols=89 Identities=22% Similarity=0.268 Sum_probs=58.8
Q ss_pred CCCCCCccEEE----EEeCCEEEEEeeCCCCC------CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEE
Q psy4956 89 PPDPPTNLSVN----VRSGKTAQIFWSPPISG------KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSY 158 (361)
Q Consensus 89 ~~~~p~~l~~~----~~~~~~v~l~W~~p~~~------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 158 (361)
.|+||.++.+. ..+.+.+.|+|++|... ....|++.++..+...+.. . ...... .+.|.+|.|++.|
T Consensus 2 kP~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~-~-~~~~~~-~~~i~~L~p~t~Y 78 (104)
T d3d48r2 2 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-H-FAGQQT-EFKILSLHPGQKY 78 (104)
T ss_dssp CCCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEE-E-EEETCS-EEEECC--CCCEE
T ss_pred CCcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceee-e-cccccc-EEEECCCCCCCEE
Confidence 58899988875 33567899999998621 2346888887765433322 2 333445 8999999999999
Q ss_pred EEEEEEEeCCCC-cccceeeeec
Q psy4956 159 QVQLFSVYDSKE-SVAYTSRNFT 180 (361)
Q Consensus 159 ~v~v~a~~~~~~-s~~~~~~~~~ 180 (361)
.|+|+|.+..|. |..+....+.
T Consensus 79 ~~rVrA~n~~G~ws~wS~~~~v~ 101 (104)
T d3d48r2 79 LVQVRCKPDHGYWSAWSPATFIQ 101 (104)
T ss_dssp EEEEEEEESSSCCCCCCCCEEEE
T ss_pred EEEEEEEeCCCCCCCCcCCEEEE
Confidence 999999998876 6554444443
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=1.1e-10 Score=78.00 Aligned_cols=83 Identities=18% Similarity=0.072 Sum_probs=66.5
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCC-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISG-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYD 167 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~ 167 (361)
+|++|.++++...+..++.|+|.++.++ ...+|.|.++......+........... .+.+.+|.+++.|.|+|.|.|.
T Consensus 3 PP~~P~n~~~~~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~~~~~Y~f~V~A~N~ 81 (95)
T d1bqua1 3 PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTS-CTVDYSTVYFVNIEVWVEAENA 81 (95)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEECCSSCTTE-EECSSCCCTTSCEEEEEEEEET
T ss_pred CcCCCeeeEEEEccCCEEEEEEeCcccCCCceEEEEEEEEcccceeEeeccccccee-eeeeeecCCCcEEEEEEEEEeC
Confidence 6889999999999999999999998743 4679999998865544444444444444 6777899999999999999999
Q ss_pred CCCcc
Q psy4956 168 SKESV 172 (361)
Q Consensus 168 ~~~s~ 172 (361)
.|.+.
T Consensus 82 ~G~s~ 86 (95)
T d1bqua1 82 LGKVT 86 (95)
T ss_dssp TEEEE
T ss_pred Ccccc
Confidence 88764
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.11 E-value=2.6e-10 Score=77.91 Aligned_cols=80 Identities=11% Similarity=0.065 Sum_probs=56.7
Q ss_pred CCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCC-CCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEK-TPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
.|..+.+...+.+++.|+|++|. .+.+.+|.|+|+...+. .+........... .+.|.+|.|++.|.|+|+|.+..
T Consensus 10 ~P~~p~~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~~~~~-~~~l~~L~p~t~Y~frVra~~~~ 88 (106)
T d1cd9b2 10 LDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKD-QFELCGLHQAPVYTLQMRCIRSS 88 (106)
T ss_dssp CCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEEESCEE-EEEECCCCSCSCEEEEEEEEESS
T ss_pred CCCCCeEecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecccCCce-EEEEeccCCCeEEEEEEEEEeCC
Confidence 34556667778899999999877 44578999999975444 4444444444555 89999999999999999999988
Q ss_pred CCcc
Q psy4956 169 KESV 172 (361)
Q Consensus 169 ~~s~ 172 (361)
|.+.
T Consensus 89 g~g~ 92 (106)
T d1cd9b2 89 LPGF 92 (106)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7754
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=5.8e-10 Score=76.05 Aligned_cols=80 Identities=14% Similarity=0.191 Sum_probs=60.4
Q ss_pred cCCCCCCccEEEEEe-CCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRS-GKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 88 t~~~~p~~l~~~~~~-~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
..++||.++.+.... .+.+.|+|.+|. ......|+|+|+..+...+.....+....+ ++.|.+|.|++.|.|+|+
T Consensus 3 Vk~dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~t-~~~i~~L~p~t~Y~~rVR 81 (105)
T d1erna2 3 VLLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILEGRT-ECVLSNLRGRTRYTFAVR 81 (105)
T ss_dssp BCCCCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEEEECTTCC-EEEECSCCSSCEEEEEEE
T ss_pred cccCCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEEeecCCcc-EEEEeCCCCCcEEEEEEE
Confidence 468999999988764 456999999875 223458999999876544444555555566 899999999999999999
Q ss_pred EEeCC
Q psy4956 164 SVYDS 168 (361)
Q Consensus 164 a~~~~ 168 (361)
|...+
T Consensus 82 ar~~~ 86 (105)
T d1erna2 82 ARMAE 86 (105)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99643
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=6.6e-10 Score=75.60 Aligned_cols=83 Identities=11% Similarity=0.113 Sum_probs=63.5
Q ss_pred CCCCCcceEEEecc--CCeEEEEeecCCC---CCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 182 KPNTPGKFIVWFRN--ETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 182 ~p~~p~~l~~~~~~--~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
+|++|.++.+.... ...|.|+|+++.. .+.+..|.|.|+..+......... ....+.+.+.+|.|++.|.|
T Consensus 1 kP~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~ 76 (104)
T d1n26a3 1 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV----KDLQHHCVIHDAWSGLRHVV 76 (104)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC----GGGCSEEEESSCCTTCCEEE
T ss_pred CCcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeecc----ccceEEEEECCCCCCCEEEE
Confidence 47899999998764 4579999998642 256789999999876655443322 22347899999999999999
Q ss_pred EEEEEeCCCCCC
Q psy4956 257 SVQTVSEDEIST 268 (361)
Q Consensus 257 ~V~a~~~~~~s~ 268 (361)
+|+|.+..|.+.
T Consensus 77 rVra~n~~g~g~ 88 (104)
T d1n26a3 77 QLRAQEEFGQGE 88 (104)
T ss_dssp EEEEEETTTBSC
T ss_pred EEEEEeCCCccC
Confidence 999999877653
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=9.9e-10 Score=74.74 Aligned_cols=84 Identities=19% Similarity=0.316 Sum_probs=58.4
Q ss_pred CCCCCcceEEE----eccCCeEEEEeecCCCC-----CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCC
Q psy4956 182 KPNTPGKFIVW----FRNETTLLVLWQPSYPA-----SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGR 252 (361)
Q Consensus 182 ~p~~p~~l~~~----~~~~~~~~v~W~~~~~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t 252 (361)
+|++|.++.+. ....+++.|+|++|... +.+..|.+.+...+........... .+.+.+.+|.+++
T Consensus 2 kP~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~-----~~~~~i~~L~p~t 76 (104)
T d3d48r2 2 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQ-----QTEFKILSLHPGQ 76 (104)
T ss_dssp CCCCCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEEEET-----CSEEEECC--CCC
T ss_pred CCcCCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeecccc-----ccEEEECCCCCCC
Confidence 47899999885 33556799999986422 3456899988887665554433332 4789999999999
Q ss_pred eEEEEEEEEeCCCC-CCce
Q psy4956 253 AYNISVQTVSEDEI-STPT 270 (361)
Q Consensus 253 ~Y~v~V~a~~~~~~-s~~~ 270 (361)
.|.|+|+|.+..|. |+.+
T Consensus 77 ~Y~~rVrA~n~~G~ws~wS 95 (104)
T d3d48r2 77 KYLVQVRCKPDHGYWSAWS 95 (104)
T ss_dssp EEEEEEEEEESSSCCCCCC
T ss_pred EEEEEEEEEeCCCCCCCCc
Confidence 99999999998886 5433
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1.8e-10 Score=78.08 Aligned_cols=86 Identities=24% Similarity=0.332 Sum_probs=55.2
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC----CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA----SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 257 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 257 (361)
+|.+|.+|.+.....+++.|.|.+|... .....|.|.|...+........... .......+.+.+|.|++.|.|+
T Consensus 1 kP~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~r 79 (101)
T d1iarb2 1 KPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVT-YLEPSLRIAASTLKSGISYRAR 79 (101)
T ss_dssp CCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEEC-SSCCEEEECC-----CCCEEEE
T ss_pred CcccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeec-cCccceEEEECCCCCCCEEEEE
Confidence 4789999999999999999999876433 2334699999877665544333222 1334467889999999999999
Q ss_pred EEEEeCCCCCC
Q psy4956 258 VQTVSEDEIST 268 (361)
Q Consensus 258 V~a~~~~~~s~ 268 (361)
|+|.+..|.+.
T Consensus 80 VrA~~~~g~g~ 90 (101)
T d1iarb2 80 VRAWAQAYNTT 90 (101)
T ss_dssp EEEECGGGTCC
T ss_pred EEEEcCCCCCC
Confidence 99998776653
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=1.6e-10 Score=77.27 Aligned_cols=85 Identities=8% Similarity=0.011 Sum_probs=65.7
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTV 261 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~ 261 (361)
.|.+|.++.+...+.+++.|+|+++...+...+|.|.++........... ........+.+.+|.+++.|.|+|.|.
T Consensus 3 PP~~P~n~~~~~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~~~~Y~f~V~A~ 79 (95)
T d1bqua1 3 PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA---KRDTPTSCTVDYSTVYFVNIEVWVEAE 79 (95)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEEC---CSSCTTEEECSSCCCTTSCEEEEEEEE
T ss_pred CcCCCeeeEEEEccCCEEEEEEeCcccCCCceEEEEEEEEcccceeEeec---ccccceeeeeeeecCCCcEEEEEEEEE
Confidence 47899999999999999999999886556678999999876543332211 113345677788999999999999999
Q ss_pred eCCCCCCc
Q psy4956 262 SEDEISTP 269 (361)
Q Consensus 262 ~~~~~s~~ 269 (361)
|..|.+.+
T Consensus 80 N~~G~s~S 87 (95)
T d1bqua1 80 NALGKVTS 87 (95)
T ss_dssp ETTEEEEC
T ss_pred eCCccccC
Confidence 98886543
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=4.3e-10 Score=77.37 Aligned_cols=87 Identities=10% Similarity=0.174 Sum_probs=64.7
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCC---CcceEEEEEEeCCCCCCceeE-EeeccCCCCCcEEEecCCCCCCeEEEEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPA---SIYTHYKVSIDPPDAPESVLY-VEKEGEPPGPAQAAFKGLVPGRAYNISVQ 259 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~---~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 259 (361)
.+|.++.+...+.+++.|.|+++... +.+.+|.|.|+..+....... ............+.+.+|.|++.|.|+|+
T Consensus 10 ~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 89 (109)
T d1va9a1 10 GPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ 89 (109)
T ss_dssp SCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEE
T ss_pred CCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCeeEEEECCCCcceEEEEEEE
Confidence 47889999999999999999875322 688899999987654332111 11111133457899999999999999999
Q ss_pred EEeCCCCCCce
Q psy4956 260 TVSEDEISTPT 270 (361)
Q Consensus 260 a~~~~~~s~~~ 270 (361)
|.|..|.|+.+
T Consensus 90 a~n~~G~g~~S 100 (109)
T d1va9a1 90 AFNRAGTGPSS 100 (109)
T ss_dssp EEETTEECCCC
T ss_pred EEcCCcCCCCC
Confidence 99998877554
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.07 E-value=3.7e-10 Score=79.47 Aligned_cols=92 Identities=13% Similarity=0.173 Sum_probs=64.9
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCC-CCcceEEEEEEeCCCCCCce-----eEE---eec----cCCCCCcEEEecC
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYP-ASIYTHYKVSIDPPDAPESV-----LYV---EKE----GEPPGPAQAAFKG 247 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~-~~~~~~y~v~~~~~~~~~~~-----~~~---~~~----~~~~~~~~~~~~~ 247 (361)
..|.+|.++++.. +.+++.|+|++|.. .+.+.+|.|.|+........ ... ... ........+.+.+
T Consensus 6 ~~P~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (123)
T d1wfta_ 6 SGPGAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHID 84 (123)
T ss_dssp SCCCCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCB
T ss_pred CCCcCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcC
Confidence 4588999999875 67899999997643 38899999999765442211 000 000 0011124567889
Q ss_pred CCCCCeEEEEEEEEeCCCCCCceEEE
Q psy4956 248 LVPGRAYNISVQTVSEDEISTPTTAQ 273 (361)
Q Consensus 248 L~p~t~Y~v~V~a~~~~~~s~~~~~~ 273 (361)
|.|++.|.|+|+|.|..|.++.+...
T Consensus 85 L~p~t~Y~frV~A~N~~G~Gp~S~~~ 110 (123)
T d1wfta_ 85 YTSRPAIVFRISAKNEKGYGPATQIR 110 (123)
T ss_dssp CSSSCEEEEEEEEBSSSSBCCCEEEE
T ss_pred CCCCCEEEEEEEEecCCcCCCCCCcE
Confidence 99999999999999999999877654
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=2.8e-10 Score=77.64 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=53.1
Q ss_pred CCccceEEeeecCCceEEEEeeCCC-CCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEe
Q psy4956 280 RPLSFTYDKASITSNSLRVVWEPPK-GFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVS 358 (361)
Q Consensus 280 ~p~~l~~~~~~~~~~si~l~W~~~~-~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 358 (361)
.|..+.+ ...+.+++.|+|+++. +...+.+|+|+|+...+..............+++.+.+ |.||+.|.|+|+|.+
T Consensus 9 ~P~~p~~--~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~frVra~n 85 (105)
T d2d9qb2 9 MDPSPEA--APPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCG-LLPATAYTLQIRCIR 85 (105)
T ss_dssp CCC---------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECS-CCSCCCEEEEEEEEE
T ss_pred CCCCCEe--ecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeecccCCcceeEEec-ccCCeEEEEEEEEEe
Confidence 3445566 6778899999999973 23478899999998765333333333455667899986 999999999999987
Q ss_pred C
Q psy4956 359 G 359 (361)
Q Consensus 359 ~ 359 (361)
.
T Consensus 86 ~ 86 (105)
T d2d9qb2 86 W 86 (105)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=8.5e-10 Score=76.96 Aligned_cols=86 Identities=17% Similarity=0.241 Sum_probs=62.0
Q ss_pred eccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCc-eeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCCCCCCceE
Q psy4956 193 FRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPES-VLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSEDEISTPTT 271 (361)
Q Consensus 193 ~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~ 271 (361)
.++.++|.|+|+++...+.+.+|+|.|+....... ..............++.+.+|+|++.|.|+|+|++..|.+..+.
T Consensus 26 ~~s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~ 105 (120)
T d1ujta_ 26 VLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSE 105 (120)
T ss_dssp CCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCC
T ss_pred EeCCCeEEEEecCCCCCCcEEEEEEEeeecccCCCCcceEEEEeccCceeEEEECCCCCCCEEEEEEEEEeCCcCcCCCC
Confidence 35778999999987656789999999986543221 11111122234567899999999999999999999999887653
Q ss_pred -EEEecCC
Q psy4956 272 -AQYRTIP 278 (361)
Q Consensus 272 -~~~~t~~ 278 (361)
+.+.|.+
T Consensus 106 ~~~~~T~e 113 (120)
T d1ujta_ 106 SKTVRTTE 113 (120)
T ss_dssp CEEEEECS
T ss_pred CEEEEeCC
Confidence 4566655
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.2e-09 Score=75.71 Aligned_cols=94 Identities=13% Similarity=0.206 Sum_probs=64.6
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCCCC--------CcccEEEEEEECCCCCCCeE-EeecCCCCceEEEcCCCCCcEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPISG--------KYSGFKLKVISLSEKTPPRI-IGFTENPPAGYSLKDLTPGGSY 158 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~~~--------~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~~~Y 158 (361)
..|.+|.+|.+. .+.+.+.|+|++|... ....|.+.|+..+...+... ........ .+.+.+|.|++.|
T Consensus 4 vkP~pP~nl~v~-~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~p~t~Y 81 (114)
T d2gysa2 4 VQPPEPRDLQIS-TDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQA-TLGPEHLMPSSTY 81 (114)
T ss_dssp BCCCCCEEEEEE-EETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEESSSEE-EECTTTCCTTCEE
T ss_pred ccCCcCCCeEEE-EeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEeeccCceE-EEEeCCCCCCcEE
Confidence 368999999985 5678999999998621 13468999988665433332 22333333 7788999999999
Q ss_pred EEEEEEEeCCCC------cccceeeeeccCC
Q psy4956 159 QVQLFSVYDSKE------SVAYTSRNFTTKP 183 (361)
Q Consensus 159 ~v~v~a~~~~~~------s~~~~~~~~~t~p 183 (361)
.|+|+|.+..|. |..+....+.|.|
T Consensus 82 ~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~p 112 (114)
T d2gysa2 82 VARVRTRLAPGSRLSGRPSKWSPEVCWDSQP 112 (114)
T ss_dssp EEEEEEEECTTSSCCBCCCCCCCCEEEECCC
T ss_pred EEEEEEEeCCCCCCCCCccCCcCCEeeeCcC
Confidence 999999986654 3344455566643
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.04 E-value=4e-10 Score=76.93 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=52.4
Q ss_pred CccceEEeeecCCceEEEEeeCCCC-CCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEEEEeC
Q psy4956 281 PLSFTYDKASITSNSLRVVWEPPKG-FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVKTVSG 359 (361)
Q Consensus 281 p~~l~~~~~~~~~~si~l~W~~~~~-~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~ 359 (361)
|..+.+ ...+.++|.|+|++|.. ...+.+|+|+|+...+......+.......+++.+.+ |.|++.|.|+|+|++.
T Consensus 11 P~~p~~--~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~~~~~~~~l~~-L~p~t~Y~frVra~~~ 87 (106)
T d1cd9b2 11 DIGPDV--VSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCG-LHQAPVYTLQMRCIRS 87 (106)
T ss_dssp CC---------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECC-CCSCSCEEEEEEEEES
T ss_pred CCCCeE--ecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecccCCceEEEEec-cCCCeEEEEEEEEEeC
Confidence 344455 67788999999998732 2468899999997654333333333445668899986 9999999999999975
Q ss_pred C
Q psy4956 360 K 360 (361)
Q Consensus 360 ~ 360 (361)
.
T Consensus 88 ~ 88 (106)
T d1cd9b2 88 S 88 (106)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=6.4e-10 Score=79.91 Aligned_cols=96 Identities=20% Similarity=0.338 Sum_probs=68.7
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCC--C---------CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPIS--G---------KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGS 157 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~--~---------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 157 (361)
.+..+....+..++.+++.|+|++|.. + .+..|.+.++........... ...... .+.|.+|.|++.
T Consensus 17 ~~~~~~~P~V~~v~~~sv~l~W~~P~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-~~~~~~-~~~i~~L~P~t~ 94 (137)
T d1wk0a_ 17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-YVGEET-NITLNDLKPAMD 94 (137)
T ss_dssp HTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-EEESCS-EEEECSCCTTCE
T ss_pred CCCCCCCCEEEEeEcCEEEEEEeCcCcCCCceeeccccceEEeeEEEEeeCCCCccEEEE-EecCcc-EEEECCCCCCcE
Confidence 355556667888899999999998762 1 245688887665443333332 334455 899999999999
Q ss_pred EEEEEEEEeCCCCcccceeeeeccCCCCC
Q psy4956 158 YQVQLFSVYDSKESVAYTSRNFTTKPNTP 186 (361)
Q Consensus 158 Y~v~v~a~~~~~~s~~~~~~~~~t~p~~p 186 (361)
|.|+|+|.+..|.+.++....++|.+.+|
T Consensus 95 Y~f~V~A~n~~G~g~~S~~~~~~T~~~~P 123 (137)
T d1wk0a_ 95 YHAKVQAEYNSIKGTPSEAEIFTTLSCEP 123 (137)
T ss_dssp ECEEEEEEETTEECCCCCCCCEECCCSSS
T ss_pred EEEEEEEEcCCcccCCCCCEEEECCCCCC
Confidence 99999999999888766666677764333
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.02 E-value=1.5e-09 Score=75.92 Aligned_cols=91 Identities=11% Similarity=0.092 Sum_probs=62.5
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEe----CCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSID----PPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~ 255 (361)
.|.+|.++.+..++.++|.|.|++|..+ ..+.+|.|.|+ .............. .+.+.+.+|+|++.|.
T Consensus 15 pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~~-----~~~~~v~~L~p~t~Y~ 89 (120)
T d1wfua_ 15 PLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGY-----ATRHVVEGLEPRTLYK 89 (120)
T ss_dssp CCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEES-----CSEEEEESCCTTCEEE
T ss_pred CCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeecccc-----ccEEeCCCCCCCcEee
Confidence 3567777778888899999999876433 23555555543 33333333333322 3789999999999999
Q ss_pred EEEEEEeCCCCCCceE-EEEecC
Q psy4956 256 ISVQTVSEDEISTPTT-AQYRTI 277 (361)
Q Consensus 256 v~V~a~~~~~~s~~~~-~~~~t~ 277 (361)
|+|+|+|..|.+.... +.+.|.
T Consensus 90 frV~A~n~~G~s~~S~~~~~~T~ 112 (120)
T d1wfua_ 90 FRLKVTSPSGEYEYSPVVSVATT 112 (120)
T ss_dssp EEEEEECSSSCEEECCCEEEECC
T ss_pred EEEEEEeCCcEeCCCCCEEEEeC
Confidence 9999999998875443 444454
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=1.1e-09 Score=74.69 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=58.1
Q ss_pred CCCCCccEEEEEe------CCEEEEEeeCCCCC------CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcE
Q psy4956 90 PDPPTNLSVNVRS------GKTAQIFWSPPISG------KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGS 157 (361)
Q Consensus 90 ~~~p~~l~~~~~~------~~~v~l~W~~p~~~------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 157 (361)
|+||.+|.+.... ..++.|+|++|... ....|+|+|+..+...+. ... ....+ .+.|.+|.+++.
T Consensus 1 PdPP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~-~~~-~~~~~-~~~i~~L~~~t~ 77 (106)
T d1axib2 1 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWK-MMD-PILTT-SVPVYSLKVDKE 77 (106)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCE-ECC-CBSSS-EEEEEEEETTSC
T ss_pred CcCCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccce-eee-ecccc-eEEECCCCCCCE
Confidence 6889998876433 24799999998621 245799999987654443 222 23345 899999999999
Q ss_pred EEEEEEEEeCCC--Ccccc
Q psy4956 158 YQVQLFSVYDSK--ESVAY 174 (361)
Q Consensus 158 Y~v~v~a~~~~~--~s~~~ 174 (361)
|.|+|+|.+.++ .|..+
T Consensus 78 Y~frVRa~~~~~g~ws~wS 96 (106)
T d1axib2 78 YEVRVRSKQRNSGNYGEFS 96 (106)
T ss_dssp EEEEEEEEETTSSCCCCCC
T ss_pred EEEEEEEEECCCCCCCCCC
Confidence 999999987543 35443
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=5.2e-10 Score=79.02 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=68.2
Q ss_pred CCCcceEEEeccCCeEEEEeecCCC---CCcceEEEEEEeCCCCCCc----eeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYP---ASIYTHYKVSIDPPDAPES----VLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~---~~~~~~y~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.+|.++.+...+.++|.|+|+++.. .+.+.+|.+.+........ ...............+.|.+|.|++.|.|
T Consensus 16 ~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 95 (125)
T d1uena_ 16 VAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTL 95 (125)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEE
T ss_pred CCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCccEEEECCCCCCCEEEE
Confidence 5688999999999999999987632 2677888888865332111 00000001123457899999999999999
Q ss_pred EEEEEeCCCCCCce-EEEEecCCCCC
Q psy4956 257 SVQTVSEDEISTPT-TAQYRTIPLRP 281 (361)
Q Consensus 257 ~V~a~~~~~~s~~~-~~~~~t~~~~p 281 (361)
+|+|.|..|.+..+ .+.+.|.+..|
T Consensus 96 ~V~A~n~~G~g~~S~~~~~~T~~~~p 121 (125)
T d1uena_ 96 NVRVVNGKGEGPASPDRVFNTPEGSG 121 (125)
T ss_dssp EEEEEESSCEEEECCCEEEECCCCCS
T ss_pred EEEEEeCCcccCCCCCEEEECCCCCc
Confidence 99999998876543 35667766544
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=9e-12 Score=84.70 Aligned_cols=92 Identities=13% Similarity=0.209 Sum_probs=69.0
Q ss_pred cCCCCCCccEEEEEeCCEEEEEeeCCC--CCCcccEEEEEEECCCCCCCeE--EeecCCCCceEEEcCCCCCcEEEEEEE
Q psy4956 88 TPPDPPTNLSVNVRSGKTAQIFWSPPI--SGKYSGFKLKVISLSEKTPPRI--IGFTENPPAGYSLKDLTPGGSYQVQLF 163 (361)
Q Consensus 88 t~~~~p~~l~~~~~~~~~v~l~W~~p~--~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~~~Y~v~v~ 163 (361)
.+++.|.++.+...+.+++.|+|.+|. +|.+.+|+|+|+..+....... ........ .+.+.+|.|+ .|.|+|+
T Consensus 3 ~~~d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~~~-tY~~rV~ 80 (102)
T d2dtge1 3 KADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALER-GCRLRGLSPG-NYSVRIR 80 (102)
T ss_dssp CCCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTT-CCCCCSCCSS-EECCCCC
T ss_pred CCCCCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeeeeecccceE-EEEEecccee-eEEEEEE
Confidence 357788888888888999999999887 5678999999987654322221 22223334 7999999997 5999999
Q ss_pred EEeCCCCcccceeeeecc
Q psy4956 164 SVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 164 a~~~~~~s~~~~~~~~~t 181 (361)
|.+..|.|..+....+.+
T Consensus 81 A~n~~G~g~~S~~v~f~~ 98 (102)
T d2dtge1 81 ATSLAGNGSWTEPTYFYV 98 (102)
T ss_dssp EEETTBCCCCCCCCEECC
T ss_pred EEcCCccCCCCCCEEEEc
Confidence 999999887665555555
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=2.3e-09 Score=72.97 Aligned_cols=79 Identities=18% Similarity=0.317 Sum_probs=57.4
Q ss_pred CCCCCccceEEeeec-CCceEEEEeeCCCC--CCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEE
Q psy4956 277 IPLRPLSFTYDKASI-TSNSLRVVWEPPKG--FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVL 353 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~-~~~si~l~W~~~~~--~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~ 353 (361)
.++||.+|.+ ... ..+.+.|+|.+|.. ...+..|+|+|+..+..... .........+++.+.+ |.||+.|.|+
T Consensus 4 k~dPP~nl~v--~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~-~~~~~~~~~t~~~i~~-L~p~t~Y~~r 79 (105)
T d1erna2 4 LLDAPVGLVA--RLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSV-QRVEILEGRTECVLSN-LRGRTRYTFA 79 (105)
T ss_dssp CCCCCEEEEE--EECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEE-EEEEECTTCCEEEECS-CCSSCEEEEE
T ss_pred ccCCCCCCEE--EEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCce-EEEeecCCccEEEEeC-CCCCcEEEEE
Confidence 5889999999 554 34569999998642 24567899999987643222 2233445567899986 9999999999
Q ss_pred EEEEeC
Q psy4956 354 VKTVSG 359 (361)
Q Consensus 354 V~a~~~ 359 (361)
|+|...
T Consensus 80 VRar~~ 85 (105)
T d1erna2 80 VRARMA 85 (105)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999864
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=2.3e-09 Score=73.00 Aligned_cols=78 Identities=13% Similarity=0.196 Sum_probs=57.4
Q ss_pred CCCCcceEEEeccC------CeEEEEeecCCCC-----CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCC
Q psy4956 183 PNTPGKFIVWFRNE------TTLLVLWQPSYPA-----SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPG 251 (361)
Q Consensus 183 p~~p~~l~~~~~~~------~~~~v~W~~~~~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 251 (361)
|+||.+|.+..... .++.|+|++|... ..+..|.|.|+..+......... ...+.+.+.+|.++
T Consensus 1 PdPP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~-----~~~~~~~i~~L~~~ 75 (106)
T d1axib2 1 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP-----ILTTSVPVYSLKVD 75 (106)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC-----BSSSEEEEEEEETT
T ss_pred CcCCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeee-----cccceEEECCCCCC
Confidence 67899998864432 3699999987432 24568999999876665543222 22478999999999
Q ss_pred CeEEEEEEEEeCCC
Q psy4956 252 RAYNISVQTVSEDE 265 (361)
Q Consensus 252 t~Y~v~V~a~~~~~ 265 (361)
+.|.|+|+|.+.++
T Consensus 76 t~Y~frVRa~~~~~ 89 (106)
T d1axib2 76 KEYEVRVRSKQRNS 89 (106)
T ss_dssp SCEEEEEEEEETTS
T ss_pred CEEEEEEEEEECCC
Confidence 99999999988543
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=2.1e-09 Score=74.46 Aligned_cols=80 Identities=16% Similarity=0.204 Sum_probs=58.0
Q ss_pred cCCCCCccceEEeeecCCceEEEEeeCCCCC-------CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCc
Q psy4956 276 TIPLRPLSFTYDKASITSNSLRVVWEPPKGF-------SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGR 348 (361)
Q Consensus 276 t~~~~p~~l~~~~~~~~~~si~l~W~~~~~~-------~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t 348 (361)
..|.+|.+|.+ . ...+++.|+|.+|... ..+..|+|+|+..+...............+.+.+.+ |.||+
T Consensus 4 vkP~pP~nl~v--~-~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~p~t 79 (114)
T d2gysa2 4 VQPPEPRDLQI--S-TDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILLSNTSQATLGPEH-LMPSS 79 (114)
T ss_dssp BCCCCCEEEEE--E-EETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEEESSSEEEECTTT-CCTTC
T ss_pred ccCCcCCCeEE--E-EeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEeeccCceEEEEeCC-CCCCc
Confidence 46889999999 4 4567899999997421 134579999998765433333333445556788886 99999
Q ss_pred eEEEEEEEEeC
Q psy4956 349 TYQVLVKTVSG 359 (361)
Q Consensus 349 ~Y~v~V~a~~~ 359 (361)
.|.|+|+|.+.
T Consensus 80 ~Y~~rVRa~~~ 90 (114)
T d2gysa2 80 TYVARVRTRLA 90 (114)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEeC
Confidence 99999999874
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=2.6e-09 Score=76.64 Aligned_cols=96 Identities=18% Similarity=0.211 Sum_probs=67.7
Q ss_pred cCCCCCcceEEEeccCCeEEEEeecCCCC----------CcceEEEEEEeCCCCCCc-eeEEeeccCCCCCcEEEecCCC
Q psy4956 181 TKPNTPGKFIVWFRNETTLLVLWQPSYPA----------SIYTHYKVSIDPPDAPES-VLYVEKEGEPPGPAQAAFKGLV 249 (361)
Q Consensus 181 t~p~~p~~l~~~~~~~~~~~v~W~~~~~~----------~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~ 249 (361)
..|..+....+..++.+++.|+|+++... ..+..|.+.+........ ....... ...+.|.+|.
T Consensus 16 ~~~~~~~~P~V~~v~~~sv~l~W~~P~~~~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~-----~~~~~i~~L~ 90 (137)
T d1wk0a_ 16 ALLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGE-----ETNITLNDLK 90 (137)
T ss_dssp HHTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEES-----CSEEEECSCC
T ss_pred cCCCCCCCCEEEEeEcCEEEEEEeCcCcCCCceeeccccceEEeeEEEEeeCCCCccEEEEEecC-----ccEEEECCCC
Confidence 33555666678889999999999876432 135679998887654332 2222222 4789999999
Q ss_pred CCCeEEEEEEEEeCCCCCCceE-EEEecCCCCC
Q psy4956 250 PGRAYNISVQTVSEDEISTPTT-AQYRTIPLRP 281 (361)
Q Consensus 250 p~t~Y~v~V~a~~~~~~s~~~~-~~~~t~~~~p 281 (361)
|++.|.|+|+|.+..|.+.+.. +.+.|.+.+|
T Consensus 91 P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~P 123 (137)
T d1wk0a_ 91 PAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEP 123 (137)
T ss_dssp TTCEECEEEEEEETTEECCCCCCCCEECCCSSS
T ss_pred CCcEEEEEEEEEcCCcccCCCCCEEEECCCCCC
Confidence 9999999999999988776543 4456655444
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.95 E-value=3.4e-09 Score=72.35 Aligned_cols=87 Identities=15% Similarity=0.124 Sum_probs=60.8
Q ss_pred CCCCCcceEE-EeccCCeEEEEeecCCCCCcceEEEEEEeCCCCC----CceeEEeeccCCCCCcEEEecCCCCCCeEEE
Q psy4956 182 KPNTPGKFIV-WFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP----ESVLYVEKEGEPPGPAQAAFKGLVPGRAYNI 256 (361)
Q Consensus 182 ~p~~p~~l~~-~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 256 (361)
.|.+|.++.+ .....+++.|+|.++...+....|.+.+...... .................+.+.+|.+++.|.|
T Consensus 4 PP~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t~Y~f 83 (107)
T d1cd9b1 4 PPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAI 83 (107)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEE
T ss_pred ccCCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcCceEEE
Confidence 4788999985 5667889999999875445446777777544321 1111122222234557788999999999999
Q ss_pred EEEEEeCCCCCC
Q psy4956 257 SVQTVSEDEIST 268 (361)
Q Consensus 257 ~V~a~~~~~~s~ 268 (361)
+|.|.|..|.+.
T Consensus 84 rV~A~N~~G~s~ 95 (107)
T d1cd9b1 84 WVQAENMLGSSE 95 (107)
T ss_dssp EEEEEETTEEEE
T ss_pred EEEEEeCCcccc
Confidence 999999888653
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=2.1e-09 Score=73.75 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=57.4
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCC----CCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKG----FSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQV 352 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~----~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v 352 (361)
+|+||.+|.+.....+.+++.|+|++|.. ......|.+++...+..... ... ....+++++.+ |.|++.|.|
T Consensus 7 kP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~-~~~--~~~~~~~~i~~-L~~~t~Y~~ 82 (109)
T d1uc6a_ 7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQ-HVE--LSNGTAHTITD-AYAGKEYII 82 (109)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCC-CEE--ESSCSEEEETT-CCSSSCEEE
T ss_pred ECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceE-Eec--cCCceeEEeCC-CCCCCEEEE
Confidence 68899999983334466889999998732 13456799999887654332 222 24556899986 999999999
Q ss_pred EEEEEeC
Q psy4956 353 LVKTVSG 359 (361)
Q Consensus 353 ~V~a~~~ 359 (361)
+|+|.+.
T Consensus 83 rVrA~~~ 89 (109)
T d1uc6a_ 83 QVAAKDN 89 (109)
T ss_dssp EEECCBS
T ss_pred EEEEEEC
Confidence 9999754
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.94 E-value=1.4e-10 Score=80.84 Aligned_cols=92 Identities=17% Similarity=0.198 Sum_probs=59.8
Q ss_pred CCCCCCccEEEE-EeCCEEEEEeeCCCC----CCcccEEEEEEECCCCCCCeEE-eecCCCCceEEEcCCCCCcEEEEEE
Q psy4956 89 PPDPPTNLSVNV-RSGKTAQIFWSPPIS----GKYSGFKLKVISLSEKTPPRII-GFTENPPAGYSLKDLTPGGSYQVQL 162 (361)
Q Consensus 89 ~~~~p~~l~~~~-~~~~~v~l~W~~p~~----~~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~~~~l~~L~p~~~Y~v~v 162 (361)
.|.+|.++.+.. .+++++.|+|++|.. +...+|.+.|+...+....... ...... ..+.|.+|.+++.|.|+|
T Consensus 10 pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~i~~L~~~t~Y~v~V 88 (117)
T d2cspa1 10 PPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVIFPTADS-TAVELVRLRSLEAKGVTV 88 (117)
T ss_dssp CCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEEEECCTTCSE-EEEESHHHHHHTCSCBEE
T ss_pred CCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccceeeeeeccce-eeeeccCCCCCcEEEEEE
Confidence 366788888754 456799999999752 2234455555443222222222 122222 378889999999999999
Q ss_pred EEEeCCCCcccceeeeecc
Q psy4956 163 FSVYDSKESVAYTSRNFTT 181 (361)
Q Consensus 163 ~a~~~~~~s~~~~~~~~~t 181 (361)
+|.+..|.|..+....+.+
T Consensus 89 ~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 89 RTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEEESSCCCCCCSCBCCCH
T ss_pred EEEcCCCcCCCCCCEEeeC
Confidence 9999999887655544444
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=7.6e-09 Score=70.86 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=62.6
Q ss_pred cCCCCCCccEEEEE--eCCEEEEEeeCCCC-----CCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEE
Q psy4956 88 TPPDPPTNLSVNVR--SGKTAQIFWSPPIS-----GKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQV 160 (361)
Q Consensus 88 t~~~~p~~l~~~~~--~~~~v~l~W~~p~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v 160 (361)
..|+||.++.+..+ +.+++.|+|++|.. .....|.++++..+...+.... ..... .+.|.+|.+++.|.|
T Consensus 6 VkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~--~~~~~-~~~i~~L~~~t~Y~~ 82 (109)
T d1uc6a_ 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE--LSNGT-AHTITDAYAGKEYII 82 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE--ESSCS-EEEETTCCSSSCEEE
T ss_pred EECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEec--cCCce-eEEeCCCCCCCEEEE
Confidence 36889999988765 46789999998762 1235799998886654443322 23445 899999999999999
Q ss_pred EEEEEeCCC--Ccccceeeeec
Q psy4956 161 QLFSVYDSK--ESVAYTSRNFT 180 (361)
Q Consensus 161 ~v~a~~~~~--~s~~~~~~~~~ 180 (361)
+|+|.+.++ .|..+.....+
T Consensus 83 rVrA~~~~~g~wS~WS~~~~~t 104 (109)
T d1uc6a_ 83 QVAAKDNEIGTWSDWSVAAHAT 104 (109)
T ss_dssp EEECCBSSSCCCCCCCEEEEEC
T ss_pred EEEEEECCCCCcCCCCCCEEeE
Confidence 999976432 24443444443
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=3.5e-11 Score=81.66 Aligned_cols=88 Identities=17% Similarity=0.216 Sum_probs=65.0
Q ss_pred CCCCCcceEEEeccCCeEEEEeecCCCC-CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEE
Q psy4956 182 KPNTPGKFIVWFRNETTLLVLWQPSYPA-SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQT 260 (361)
Q Consensus 182 ~p~~p~~l~~~~~~~~~~~v~W~~~~~~-~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a 260 (361)
.++.|.++.+.....+++.|+|++|... |.+.+|.|.|+..+......... .........+.+.+|.+++ |.|+|+|
T Consensus 4 ~~d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~t-Y~~rV~A 81 (102)
T d2dtge1 4 ADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDT-RKHFALERGCRLRGLSPGN-YSVRIRA 81 (102)
T ss_dssp CCCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCC-SSSCCCTTCCCCCSCCSSE-ECCCCCE
T ss_pred CCCCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeee-eecccceEEEEEeccceee-EEEEEEE
Confidence 3667888888888999999999876433 78999999998765433222111 1123445678999999985 9999999
Q ss_pred EeCCCCCCceE
Q psy4956 261 VSEDEISTPTT 271 (361)
Q Consensus 261 ~~~~~~s~~~~ 271 (361)
.+..|.|+.+.
T Consensus 82 ~n~~G~g~~S~ 92 (102)
T d2dtge1 82 TSLAGNGSWTE 92 (102)
T ss_dssp EETTBCCCCCC
T ss_pred EcCCccCCCCC
Confidence 99988876554
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=3.7e-10 Score=79.78 Aligned_cols=80 Identities=16% Similarity=0.181 Sum_probs=59.6
Q ss_pred CCCCccEEEEEeCCEEEEEeeCCC---CCCcccEEEEEEECCCCCCCe---------------------E--EeecCCCC
Q psy4956 91 DPPTNLSVNVRSGKTAQIFWSPPI---SGKYSGFKLKVISLSEKTPPR---------------------I--IGFTENPP 144 (361)
Q Consensus 91 ~~p~~l~~~~~~~~~v~l~W~~p~---~~~~~~y~v~~~~~~~~~~~~---------------------~--~~~~~~~~ 144 (361)
..|.+|.+...+.++|.|+|++|. .+.+.+|.|.|+......... . ........
T Consensus 3 s~plnl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (125)
T d2dtge3 3 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP 82 (125)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred CCCEEEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccC
Confidence 467899999999999999999876 356889999987643321100 0 11112334
Q ss_pred ceEEEcCCCCCcEEEEEEEEEeCCCCc
Q psy4956 145 AGYSLKDLTPGGSYQVQLFSVYDSKES 171 (361)
Q Consensus 145 ~~~~l~~L~p~~~Y~v~v~a~~~~~~s 171 (361)
++.|.+|+|++.|.|+|+|++..|.+
T Consensus 83 -~~~l~~L~p~T~Y~~~V~A~n~~G~~ 108 (125)
T d2dtge3 83 -GWLMRGLKPWTQYAIFVKTLVTFSDE 108 (125)
T ss_dssp -EEEECSCCSSCBCCBEEEECCCCCSS
T ss_pred -EEEECCCccCCEEEEEEEEEeCCCcc
Confidence 89999999999999999999988753
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=1.3e-09 Score=76.91 Aligned_cols=84 Identities=17% Similarity=0.186 Sum_probs=62.2
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCC--CcceEEEEEEeCCCCCCcee--------------------EEeeccCCCCCc
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPA--SIYTHYKVSIDPPDAPESVL--------------------YVEKEGEPPGPA 241 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~--~~~~~y~v~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 241 (361)
.+|.+|.+...+.++|.|+|++|... +.+.+|.|.|+......... ............
T Consensus 3 s~plnl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (125)
T d2dtge3 3 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP 82 (125)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred CCCEEEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccC
Confidence 46789999999999999999987533 67899999997653321110 011112234567
Q ss_pred EEEecCCCCCCeEEEEEEEEeCCCCC
Q psy4956 242 QAAFKGLVPGRAYNISVQTVSEDEIS 267 (361)
Q Consensus 242 ~~~~~~L~p~t~Y~v~V~a~~~~~~s 267 (361)
.+.|.+|+|++.|.|+|+|++..|.+
T Consensus 83 ~~~l~~L~p~T~Y~~~V~A~n~~G~~ 108 (125)
T d2dtge3 83 GWLMRGLKPWTQYAIFVKTLVTFSDE 108 (125)
T ss_dssp EEEECSCCSSCBCCBEEEECCCCCSS
T ss_pred EEEECCCccCCEEEEEEEEEeCCCcc
Confidence 89999999999999999999988753
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.83 E-value=1.3e-08 Score=69.36 Aligned_cols=81 Identities=19% Similarity=0.181 Sum_probs=55.3
Q ss_pred CCCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCc--e----eecCCCCceeEeccCCCCCceE
Q psy4956 277 IPLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTP--I----TKSRDEPTQCDMSEGLEPGRTY 350 (361)
Q Consensus 277 ~~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~L~p~t~Y 350 (361)
.|.+|.+|+.. .....++++++|.++...+....|.+.|........... . .......+++++.+ |.|++.|
T Consensus 4 PP~~P~~v~~i-~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~~~t~Y 81 (107)
T d1cd9b1 4 PPASPSNLSCL-MHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKN-LLLYQYM 81 (107)
T ss_dssp CCCCCEEEEEE-EETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGG-CCTTSCE
T ss_pred ccCCCcCCEEE-EecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeeccccCccccEEEcCC-CCcCceE
Confidence 47789999841 467888999999987443334667777765543211111 1 11224557888986 9999999
Q ss_pred EEEEEEEeC
Q psy4956 351 QVLVKTVSG 359 (361)
Q Consensus 351 ~v~V~a~~~ 359 (361)
.|+|.|.+.
T Consensus 82 ~frV~A~N~ 90 (107)
T d1cd9b1 82 AIWVQAENM 90 (107)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEeC
Confidence 999999985
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.83 E-value=6.5e-09 Score=69.95 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=49.7
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCCCC--CCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCCCCCceEEEEEE
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPKGF--SEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGLEPGRTYQVLVK 355 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~~~--~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~ 355 (361)
+.|| +|.+ .. +.+++.|+|.+|... ..+..|+|+|+.......... .......+++++.+ |.||+.|.|+|+
T Consensus 6 ~~Pp-~l~v--~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~-~~~~~~~~~~~l~~-L~p~t~Y~~rVR 79 (100)
T d2gysa4 6 MAPP-SLQV--TK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSK-TETLQNAHSMALPA-LEPSTRYWARVR 79 (100)
T ss_dssp CCCC-EEEE--C----CCCEEEEEC--------CEEEEEEEECSSSCSTTSC-EEEEESCSEEECCC-CCSSCCCEEEEE
T ss_pred CCCC-ccEE--EE-CCCEEEEEEecCcccCCccceEEEEEEeecccceecee-ecccCCceEEEeCC-CCCCCeEEEEEE
Confidence 4455 7888 43 557899999987431 245689999987765322232 22334567899986 999999999999
Q ss_pred EEeC
Q psy4956 356 TVSG 359 (361)
Q Consensus 356 a~~~ 359 (361)
|...
T Consensus 80 a~~~ 83 (100)
T d2gysa4 80 VRTS 83 (100)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9854
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.78 E-value=7.8e-09 Score=69.54 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=50.5
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCCC--C-CcccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEEEEEEe
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPIS--G-KYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~~--~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
+.|| +|.+.. +.+++.|+|++|.. + ....|+|+|+.................. .+.|.+|.|++.|.|+|+|.+
T Consensus 6 ~~Pp-~l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~rVRa~~ 82 (100)
T d2gysa4 6 MAPP-SLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQNAH-SMALPALEPSTRYWARVRVRT 82 (100)
T ss_dssp CCCC-EEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEEESCS-EEECCCCCSSCCCEEEEEEEE
T ss_pred CCCC-ccEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccceeceeecccCCce-EEEeCCCCCCCeEEEEEEEEE
Confidence 4455 787765 55789999998862 2 2457999998765443222222223455 899999999999999999997
Q ss_pred CCC
Q psy4956 167 DSK 169 (361)
Q Consensus 167 ~~~ 169 (361)
..+
T Consensus 83 ~~g 85 (100)
T d2gysa4 83 SRT 85 (100)
T ss_dssp CCT
T ss_pred CCC
Confidence 554
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.73 E-value=3e-09 Score=73.82 Aligned_cols=83 Identities=22% Similarity=0.227 Sum_probs=55.9
Q ss_pred CCCCcceEEEe-ccCCeEEEEeecCCCC-------CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeE
Q psy4956 183 PNTPGKFIVWF-RNETTLLVLWQPSYPA-------SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 183 p~~p~~l~~~~-~~~~~~~v~W~~~~~~-------~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 254 (361)
|.+|.++.+.. .+.+++.|+|+++... +.+.+|.+.+.. ... ........+.+.+.|.+|++++.|
T Consensus 11 p~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~----~~~--~~~~~~~~~~~~~~i~~L~~~t~Y 84 (117)
T d2cspa1 11 PAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKG----QRV--AEVIFPTADSTAVELVRLRSLEAK 84 (117)
T ss_dssp CCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSS----SEE--EEECCTTCSEEEEESHHHHHHTCS
T ss_pred CCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeec----ccc--eeeeeeccceeeeeccCCCCCcEE
Confidence 56888998864 5667999999986321 345566654321 111 111222344567889999999999
Q ss_pred EEEEEEEeCCCCCCceE
Q psy4956 255 NISVQTVSEDEISTPTT 271 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~~ 271 (361)
.|+|+|++..|.|..+.
T Consensus 85 ~v~V~A~n~~G~s~~S~ 101 (117)
T d2cspa1 85 GVTVRTLSAQGESVDSA 101 (117)
T ss_dssp CBEEEEEESSCCCCCCS
T ss_pred EEEEEEEcCCCcCCCCC
Confidence 99999999998875443
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=1.8e-08 Score=67.44 Aligned_cols=84 Identities=20% Similarity=0.220 Sum_probs=56.5
Q ss_pred CCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCe---EEeecCCCCceEEEcCCCCCcEEEEEEEEEeCC
Q psy4956 92 PPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPR---IIGFTENPPAGYSLKDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 92 ~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~---~~~~~~~~~~~~~l~~L~p~~~Y~v~v~a~~~~ 168 (361)
+|.++++...+.. ..|+|++|....-..|.+++...+...+.. +........ .+.+.+|.++..|.|||+|.++.
T Consensus 3 ~P~nv~v~s~n~~-~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~Y~fRV~A~n~~ 80 (98)
T d1fyhb1 3 TPTNVTIESYNMN-PIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACINISHHYC-NISDHVGDPSNSLWVRVKARVGQ 80 (98)
T ss_dssp CCEEEEEECBSSC-CEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEEEESSSEE-ECGGGCCSTTSCEEEEEEEEETT
T ss_pred cCCceEEEEeCCc-EEEEECCCCCCCCCceeEEEEEeccccceeEEeeeeccccee-eeEecccCCCCEEEEEEEEEcCC
Confidence 6899998876554 469999987433345666666554433322 222322222 56667999999999999999999
Q ss_pred CCcccceee
Q psy4956 169 KESVAYTSR 177 (361)
Q Consensus 169 ~~s~~~~~~ 177 (361)
+.|.++...
T Consensus 81 g~S~ws~s~ 89 (98)
T d1fyhb1 81 KESAYAKSE 89 (98)
T ss_dssp EECCCEECC
T ss_pred cccCCccCC
Confidence 988764433
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=3.4e-08 Score=66.02 Aligned_cols=83 Identities=11% Similarity=0.057 Sum_probs=53.4
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCC--ceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEe
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPE--SVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVS 262 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~ 262 (361)
+|.||.+...+... .|.|++|..++. ..|.+.+....... ........ ......+.+.+|.++..|.|+|+|++
T Consensus 3 ~P~nv~v~s~n~~~-~L~W~pP~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~Y~fRV~A~n 78 (98)
T d1fyhb1 3 TPTNVTIESYNMNP-IVYWEYQIMPQV-PVFTVEVKNYGVKNSEWIDACINI--SHHYCNISDHVGDPSNSLWVRVKARV 78 (98)
T ss_dssp CCEEEEEECBSSCC-EEEEECCCCSSC-CEEEEEEEETTCSSSCCEEEEEEE--SSSEEECGGGCCSTTSCEEEEEEEEE
T ss_pred cCCceEEEEeCCcE-EEEECCCCCCCC-CceeEEEEEeccccceeEEeeeec--ccceeeeEecccCCCCEEEEEEEEEc
Confidence 78999998776554 699998754433 23444444332222 21111111 22234566789999999999999999
Q ss_pred CCCCCCceE
Q psy4956 263 EDEISTPTT 271 (361)
Q Consensus 263 ~~~~s~~~~ 271 (361)
+.+.|..+.
T Consensus 79 ~~g~S~ws~ 87 (98)
T d1fyhb1 79 GQKESAYAK 87 (98)
T ss_dssp TTEECCCEE
T ss_pred CCcccCCcc
Confidence 998876655
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=6e-08 Score=64.68 Aligned_cols=85 Identities=12% Similarity=0.131 Sum_probs=59.8
Q ss_pred CCCCCccEEEEEeCCEEEEEeeCCC-CCCcccEEEEEEECCCCCCCeEEeecCCCC--ceEEEcCCCCCcEEEEEEEEEe
Q psy4956 90 PDPPTNLSVNVRSGKTAQIFWSPPI-SGKYSGFKLKVISLSEKTPPRIIGFTENPP--AGYSLKDLTPGGSYQVQLFSVY 166 (361)
Q Consensus 90 ~~~p~~l~~~~~~~~~v~l~W~~p~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~--~~~~l~~L~p~~~Y~v~v~a~~ 166 (361)
..+|.++++.. .+....|+|++|. ++....|.|+++..+...|.....+..... ..+.+.+|.++..|.|||+|.+
T Consensus 4 lP~P~nv~~~s-~n~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA~n 82 (99)
T d1y6kr1 4 LPSPPSVWFEA-EFFHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRAVD 82 (99)
T ss_dssp CCCCSCEEEEE-ETTEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEEEE
T ss_pred CCCCCcceEEE-ECCEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeeccccccceeeeeeecCCCCEEEEEEEEEc
Confidence 34578999865 4557889999876 455568999999876555554433322211 1345678999999999999999
Q ss_pred CCCCcccce
Q psy4956 167 DSKESVAYT 175 (361)
Q Consensus 167 ~~~~s~~~~ 175 (361)
+.+.|.+..
T Consensus 83 ~~g~S~Ws~ 91 (99)
T d1y6kr1 83 GSRHSQWTV 91 (99)
T ss_dssp TTEECCCEE
T ss_pred CCCcCCCcc
Confidence 999886543
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=4.8e-08 Score=65.19 Aligned_cols=86 Identities=16% Similarity=0.056 Sum_probs=59.3
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEEEEEEEEeCC
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTVSED 264 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~ 264 (361)
+|.++++...+ ....|+|+++...+....|.|+++..+...+.....-.........+.+.+|.++..|.|+|+|.++.
T Consensus 6 ~P~nv~~~s~n-~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA~n~~ 84 (99)
T d1y6kr1 6 SPPSVWFEAEF-FHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRAVDGS 84 (99)
T ss_dssp CCSCEEEEEET-TEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEEEETT
T ss_pred CCCcceEEEEC-CEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEeeccccccceeeeeeecCCCCEEEEEEEEEcCC
Confidence 57799986544 57889999876666667899999877665554432111100001223467899999999999999999
Q ss_pred CCCCceE
Q psy4956 265 EISTPTT 271 (361)
Q Consensus 265 ~~s~~~~ 271 (361)
+.|..+.
T Consensus 85 g~S~Ws~ 91 (99)
T d1y6kr1 85 RHSQWTV 91 (99)
T ss_dssp EECCCEE
T ss_pred CcCCCcc
Confidence 8876554
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=6.4e-08 Score=63.84 Aligned_cols=77 Identities=18% Similarity=0.242 Sum_probs=48.7
Q ss_pred CCCCCCccEEEEEe-CCEEEEEeeCCCCCC------cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCCCCcEEEEE
Q psy4956 89 PPDPPTNLSVNVRS-GKTAQIFWSPPISGK------YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLTPGGSYQVQ 161 (361)
Q Consensus 89 ~~~~p~~l~~~~~~-~~~v~l~W~~p~~~~------~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~v~ 161 (361)
+|+||.||.+.... +..+.|+|.+|.... ...|+|.|+..+...+.. .... ..+ . ..|.|++.|.|+
T Consensus 1 KPdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~-~~~~-~~t-~---~~L~p~~~Y~v~ 74 (94)
T d3d85d3 1 KPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKD-RVFT-DKT-S---ATVICRKNASIS 74 (94)
T ss_dssp CCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------C-EEEE-SSS-E---EEECCCSSCEEE
T ss_pred CCCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEE-eccc-cce-E---EEecCCCCEEEE
Confidence 48899999988654 467999999986211 357999998755433322 2221 222 3 347899999999
Q ss_pred EEEEeCCCCc
Q psy4956 162 LFSVYDSKES 171 (361)
Q Consensus 162 v~a~~~~~~s 171 (361)
|+|....+.+
T Consensus 75 VRa~~~~~~g 84 (94)
T d3d85d3 75 VRAQDRYYSS 84 (94)
T ss_dssp EEEEESSSCC
T ss_pred EEEecCCCCC
Confidence 9999765444
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.51 E-value=1.8e-07 Score=61.59 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=49.9
Q ss_pred CCCCCcceEEEecc-CCeEEEEeecCCCC-----CcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCCCCCCeEE
Q psy4956 182 KPNTPGKFIVWFRN-ETTLLVLWQPSYPA-----SIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGLVPGRAYN 255 (361)
Q Consensus 182 ~p~~p~~l~~~~~~-~~~~~v~W~~~~~~-----~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~ 255 (361)
+|+||.||.+.... ...+.|+|++|... .....|.|.|+..+........... .+. ..|.|++.|.
T Consensus 1 KPdPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~~-----~t~---~~L~p~~~Y~ 72 (94)
T d3d85d3 1 KPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTD-----KTS---ATVICRKNAS 72 (94)
T ss_dssp CCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEES-----SSE---EEECCCSSCE
T ss_pred CCCCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEecccc-----ceE---EEecCCCCEE
Confidence 47899999998754 45699999887432 2256899999987665544333222 123 3478999999
Q ss_pred EEEEEEeCCCCC
Q psy4956 256 ISVQTVSEDEIS 267 (361)
Q Consensus 256 v~V~a~~~~~~s 267 (361)
|+|+|.+..+.+
T Consensus 73 v~VRa~~~~~~g 84 (94)
T d3d85d3 73 ISVRAQDRYYSS 84 (94)
T ss_dssp EEEEEEESSSCC
T ss_pred EEEEEecCCCCC
Confidence 999999765544
|
| >d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-alpha/beta receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.63 E-value=0.00035 Score=46.17 Aligned_cols=80 Identities=13% Similarity=0.191 Sum_probs=53.4
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCC-CCCceeecCCCCceeEeccCC-CCCceEEEEEE
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGA-SSTPITKSRDEPTQCDMSEGL-EPGRTYQVLVK 355 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L-~p~t~Y~v~V~ 355 (361)
+..|.+|++ ...+-.-.|+|++..+...-..|.|+|..-+... +........-..+.+.|++.+ .+...|.+||+
T Consensus 8 ~~~P~nv~i---~s~Nf~~iL~W~p~~~s~~~~~YtVqy~~~~~~~~W~~v~~C~~it~t~CDLT~e~~~~~~~Y~~RV~ 84 (109)
T d2hyma1 8 TDESCTFKI---SLRNFRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKVVKNCANTTRSFCDLTDEWRSTHEAYVTVLE 84 (109)
T ss_dssp TTCCCEEEE---EESSSCEEEEEECCCSSCCCCEEEEEEEETTCTTCCEECSSSSSBSCSEEECTTTCCCSSSCEEEEEE
T ss_pred CCCCeeEEE---EEECCceEEEECCCCCCCCCeEEEEEEEEEcccccCccchhhhCCCCCeEeCchhhccCCccEEEEEE
Confidence 445777777 4445567999998765445568999998654322 221112234456788888534 47788999999
Q ss_pred EEeCC
Q psy4956 356 TVSGK 360 (361)
Q Consensus 356 a~~~~ 360 (361)
|..|+
T Consensus 85 A~~G~ 89 (109)
T d2hyma1 85 GFSGN 89 (109)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 99885
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=96.96 E-value=0.007 Score=40.11 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=47.1
Q ss_pred CCCcceEEEecc--CCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeecc-------CCCCCcEEEecCCCCCCeE
Q psy4956 184 NTPGKFIVWFRN--ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEG-------EPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 184 ~~p~~l~~~~~~--~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~L~p~t~Y 254 (361)
.+|+.+.+.... .+++.|+|.-.... ..-.|+|....+........... .....+.+.|.+|+|++.|
T Consensus 17 ~~P~qvhlt~~~~~~tsm~VsW~T~~~~---~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y 93 (112)
T d2qfra1 17 NAPQQVHITQGDLVGRAMIISWVTMDEP---GSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (112)
T ss_dssp TCCEEEEEEECSSSSSCEEEEEEESSSC---CCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCccEEEeCcCCCCCEEEEEEECCCCC---CCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEE
Confidence 468888877543 46899999653211 12234443332222111111000 0112256899999999999
Q ss_pred EEEEEEEeCCCCCCceEEEEecCC
Q psy4956 255 NISVQTVSEDEISTPTTAQYRTIP 278 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~~~~~~t~~ 278 (361)
.++|-. ++ ......++|.|
T Consensus 94 ~YrVG~---~~--~S~~~~F~T~P 112 (112)
T d2qfra1 94 YYEVGL---RN--TTRRFSFITPP 112 (112)
T ss_dssp EEEECC---SS--SCEEEEEECCC
T ss_pred EEEECC---CC--ceeeEEEEcCC
Confidence 999832 22 33445677654
|
| >d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.82 E-value=0.0024 Score=41.22 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=53.8
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEe--cCCCCCCeEEEEEEEEe
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF--KGLVPGRAYNISVQTVS 262 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~L~p~t~Y~v~V~a~~ 262 (361)
.|.++.........++.+|++......-+.|.+.+.......... . ......+..++.| ..+.....|.|+|.|.|
T Consensus 2 kP~~~sC~s~~~~~~~C~W~~G~~t~L~T~Y~l~~~~~~~~~~~e-C-p~y~~~~~~~C~f~~~~~~~~~~y~i~V~a~N 79 (96)
T d1f6fb1 2 KPEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEKTTYE-C-PDYKTSGPNSCFFSKQYTSIWKIYIITVNATN 79 (96)
T ss_dssp CCEEEEEEBSSSSCEEEEEECCCCTTSCCEEEEEEEETTEEEEEE-C-SCSSTTCTTEEEECTTTCCSSCEEEEEEEEEE
T ss_pred CCeEeEEEeCCCCEEEEEeeCCCcCCcCceEEEEEEecCCCcccc-C-CcccCCCceeEEECCccCccceEEEEEEEEEc
Confidence 578888887777899999998643344578999987554322111 1 1111233456555 55778899999999999
Q ss_pred CCCC
Q psy4956 263 EDEI 266 (361)
Q Consensus 263 ~~~~ 266 (361)
.-|.
T Consensus 80 ~LG~ 83 (96)
T d1f6fb1 80 QMGS 83 (96)
T ss_dssp TTEE
T ss_pred CCCC
Confidence 7663
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=96.64 E-value=0.011 Score=39.04 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=47.4
Q ss_pred CCCCccEEEEEe--CCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEE-e-----ecC-CCC--ceEEEcCCCCCcEEE
Q psy4956 91 DPPTNLSVNVRS--GKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRII-G-----FTE-NPP--AGYSLKDLTPGGSYQ 159 (361)
Q Consensus 91 ~~p~~l~~~~~~--~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~-~-----~~~-~~~--~~~~l~~L~p~~~Y~ 159 (361)
.+|..+.+.-.. .+++.|+|.-.. ....-.|+|....+....... . ... ... ..+.|++|.|++.|.
T Consensus 17 ~~P~qvhlt~~~~~~tsm~VsW~T~~--~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y~ 94 (112)
T d2qfra1 17 NAPQQVHITQGDLVGRAMIISWVTMD--EPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYY 94 (112)
T ss_dssp TCCEEEEEEECSSSSSCEEEEEEESS--SCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEEE
T ss_pred CCCccEEEeCcCCCCCEEEEEEECCC--CCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEEE
Confidence 457777766432 478999996632 223445656553332121111 0 000 000 268999999999999
Q ss_pred EEEEEEeCCCCcccceeeeeccCC
Q psy4956 160 VQLFSVYDSKESVAYTSRNFTTKP 183 (361)
Q Consensus 160 v~v~a~~~~~~s~~~~~~~~~t~p 183 (361)
++|- .++. +....|+|.|
T Consensus 95 YrVG---~~~~---S~~~~F~T~P 112 (112)
T d2qfra1 95 YEVG---LRNT---TRRFSFITPP 112 (112)
T ss_dssp EEEC---CSSS---CEEEEEECCC
T ss_pred EEEC---CCCc---eeeEEEEcCC
Confidence 9982 2232 3445677754
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=96.59 E-value=0.02 Score=38.25 Aligned_cols=88 Identities=13% Similarity=0.105 Sum_probs=48.3
Q ss_pred CCCcceEEEecc--CCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeec-------cCCCCCcEEEecCCCCCCeE
Q psy4956 184 NTPGKFIVWFRN--ETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKE-------GEPPGPAQAAFKGLVPGRAY 254 (361)
Q Consensus 184 ~~p~~l~~~~~~--~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~L~p~t~Y 254 (361)
.+|..+.+...+ .+++.|+|.-...... .-.|.|....+.......... ......+++.|.||.|++.|
T Consensus 23 ~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~--~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y 100 (119)
T d1xzwa1 23 NAPQQVHITQGDYEGRGVIISWTTPYDKAG--ANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKY 100 (119)
T ss_dssp TCCEEEEEEECSSSSSCEEEEEEESSCCTT--TTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEE
T ss_pred CCCCEEEEEecCCCCCEEEEEEECCCCCCC--CCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEE
Confidence 568777776554 4689999975322211 114556543332222111000 00112256889999999999
Q ss_pred EEEEEEEeCCCCCCceEEEEecCC
Q psy4956 255 NISVQTVSEDEISTPTTAQYRTIP 278 (361)
Q Consensus 255 ~v~V~a~~~~~~s~~~~~~~~t~~ 278 (361)
.++|-. ++ ......++|.|
T Consensus 101 ~YrVG~---~~--~S~~~~F~T~P 119 (119)
T d1xzwa1 101 YYRLGF---GD--AKRQFWFVTPP 119 (119)
T ss_dssp EEEECC---GG--GCEEEEEECCC
T ss_pred EEEECC---CC--ccceEEEeCCC
Confidence 999843 12 23345666654
|
| >d2hyma1 b.1.2.1 (A:1-109) Interferon-alpha/beta receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-alpha/beta receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.024 Score=37.01 Aligned_cols=80 Identities=15% Similarity=0.221 Sum_probs=51.7
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCC-CceeEEeeccCCCCCcEEEecC--CCCCCeEEEEEE
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP-ESVLYVEKEGEPPGPAQAAFKG--LVPGRAYNISVQ 259 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--L~p~t~Y~v~V~ 259 (361)
++.|.++++...+ -.-.|.|++......-..|.|+|...+.. .+.. +.... .-..+.+.|++ +.+...|.++|+
T Consensus 8 ~~~P~nv~i~s~N-f~~iL~W~p~~~s~~~~~YtVqy~~~~~~~~W~~-v~~C~-~it~t~CDLT~e~~~~~~~Y~~RV~ 84 (109)
T d2hyma1 8 TDESCTFKISLRN-FRSILSWELKNHSIVPTHYTLLYTIMSKPEDLKV-VKNCA-NTTRSFCDLTDEWRSTHEAYVTVLE 84 (109)
T ss_dssp TTCCCEEEEEESS-SCEEEEEECCCSSCCCCEEEEEEEETTCTTCCEE-CSSSS-SBSCSEEECTTTCCCSSSCEEEEEE
T ss_pred CCCCeeEEEEEEC-CceEEEECCCCCCCCCeEEEEEEEEEcccccCcc-chhhh-CCCCCeEeCchhhccCCccEEEEEE
Confidence 4568899887554 35678999864344456899999754332 2322 11111 22347788876 557788999999
Q ss_pred EEeCCC
Q psy4956 260 TVSEDE 265 (361)
Q Consensus 260 a~~~~~ 265 (361)
|..|..
T Consensus 85 A~~G~~ 90 (109)
T d2hyma1 85 GFSGNT 90 (109)
T ss_dssp EEETTE
T ss_pred EEcCCc
Confidence 998654
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=96.24 E-value=0.0072 Score=40.52 Aligned_cols=75 Identities=11% Similarity=0.184 Sum_probs=42.1
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCce---ee------cCCCCceeEeccCCCCCc
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPI---TK------SRDEPTQCDMSEGLEPGR 348 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~L~p~t 348 (361)
..+|..+.+.......+++.|+|.-..+ ....-.|+|-...+....... .. .....-.++|++ |+|+|
T Consensus 22 ~~~P~qvhl~~~~~~~tsm~VsW~T~~~--~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~Ltg-L~P~T 98 (119)
T d1xzwa1 22 YNAPQQVHITQGDYEGRGVIISWTTPYD--KAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKD-LEYDT 98 (119)
T ss_dssp TTCCEEEEEEECSSSSSCEEEEEEESSC--CTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECC-CCTTC
T ss_pred CCCCCEEEEEecCCCCCEEEEEEECCCC--CCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECC-CCCCC
Confidence 3567777773333446799999986432 111125666554332111000 00 011223688885 99999
Q ss_pred eEEEEEE
Q psy4956 349 TYQVLVK 355 (361)
Q Consensus 349 ~Y~v~V~ 355 (361)
.|.++|-
T Consensus 99 ~Y~YrVG 105 (119)
T d1xzwa1 99 KYYYRLG 105 (119)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999984
|
| >d2hfta1 b.1.2.1 (A:1-106) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Extracellular region of human tissue factor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.05 E-value=0.015 Score=37.82 Aligned_cols=74 Identities=19% Similarity=0.324 Sum_probs=49.7
Q ss_pred CCCCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccCC--CCCceEEEEEE
Q psy4956 278 PLRPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEGL--EPGRTYQVLVK 355 (361)
Q Consensus 278 ~~~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~p~t~Y~v~V~ 355 (361)
-..|.||++ ...+-.-.|.|+++.. . ..|.|+|...++ .+.. ...+-..+.+.|++.+ .....|.+||+
T Consensus 6 ~~~p~NV~~---~S~Nf~~iL~W~p~~~--~-~~YtVqy~~~~~-~W~~--~C~nit~~~CDlt~~~~~d~~~~Y~aRVr 76 (106)
T d2hfta1 6 TVAAYNLTW---KSTNFKTILEWEPKPV--N-QVYTVQISTKSG-DWKS--KCFYTTDTECDLTDEIVKDVKQTYLARVF 76 (106)
T ss_dssp CCCCEEEEE---EEETTEEEEEEECCCS--S-EEEEEEEEETTS-CCEE--EEEEESCSEEECHHHHGGGTTSCEEEEEE
T ss_pred cccceEEEE---EEEcCeEEEEECCCCC--C-EEEEEEEEEcCC-chhh--cccCcCccccccccccccCCCCCEEEEEE
Confidence 346888888 4455678899998643 3 459999987643 3322 2334455678886422 35678999999
Q ss_pred EEeCC
Q psy4956 356 TVSGK 360 (361)
Q Consensus 356 a~~~~ 360 (361)
|..++
T Consensus 77 A~~~~ 81 (106)
T d2hfta1 77 SYPAG 81 (106)
T ss_dssp EEECS
T ss_pred EEcCC
Confidence 98764
|
| >d1a21a1 b.1.2.1 (A:4-106) Extracellular region of human tissue factor {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Extracellular region of human tissue factor species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.00 E-value=0.015 Score=37.64 Aligned_cols=72 Identities=24% Similarity=0.397 Sum_probs=47.8
Q ss_pred CCccceEEeeecCCceEEEEeeCCCCCCCceeEEEEEEECCCCCCCCceeecCCCCceeEeccC-CCC-CceEEEEEEEE
Q psy4956 280 RPLSFTYDKASITSNSLRVVWEPPKGFSEFDKYQVSINVRRPGASSTPITKSRDEPTQCDMSEG-LEP-GRTYQVLVKTV 357 (361)
Q Consensus 280 ~p~~l~~~~~~~~~~si~l~W~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~p-~t~Y~v~V~a~ 357 (361)
.|.||++ ...+-.-.|.|+++.. . ..|.|+|...++ .+. ....+-..+.+.|++. |.+ ...|.+||+|.
T Consensus 3 k~~NV~~---~S~Nf~~iL~W~p~~~--~-~~YtVqy~~~~~-~W~--~~C~nit~~~CDlt~~~~~~~~~~Y~aRVra~ 73 (103)
T d1a21a1 3 RAYNLTW---KSTNFKTILEWEPKSI--D-HVYTVQISTRLE-NWK--SKCFLTAETECDLTDEVVKDVGQTYMARVLSY 73 (103)
T ss_dssp CCEEEEE---EEETTEEEEEEECCCS--S-EEEEEEEECSSS-CCE--EEEEEESSSEEECHHHHTTCTTSCBEEEEEEE
T ss_pred CCEEEEE---EEEcCceEEEECCCCC--C-eEEEEEEEecCC-Ccc--ccccCcCcceecCcccccccCCCCEEEEEEEe
Confidence 5778887 4444568899998643 3 459999986543 332 2233455668888742 345 46899999998
Q ss_pred eCC
Q psy4956 358 SGK 360 (361)
Q Consensus 358 ~~~ 360 (361)
.++
T Consensus 74 ~~~ 76 (103)
T d1a21a1 74 PAR 76 (103)
T ss_dssp ECC
T ss_pred cCC
Confidence 653
|
| >d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Extracellular region of human tissue factor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.27 E-value=0.021 Score=37.97 Aligned_cols=68 Identities=15% Similarity=0.088 Sum_probs=45.1
Q ss_pred CCCCcceEEEeccCCeEEEEeecCCC----CC----------cceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecCC
Q psy4956 183 PNTPGKFIVWFRNETTLLVLWQPSYP----AS----------IYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKGL 248 (361)
Q Consensus 183 p~~p~~l~~~~~~~~~~~v~W~~~~~----~~----------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 248 (361)
-.|| .+.+......+|.|.-.+|.. .+ ..-.|.|.|+..+... .. .....+.+|
T Consensus 18 IGPP-~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s~~-----~~------~~~~~l~~L 85 (116)
T d2c4fu1 18 LGQP-TIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKKTA-----KT------NTNEFLIDV 85 (116)
T ss_dssp CCCC-CEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCEEE-----EE------SSSEEEEEC
T ss_pred eCCc-eEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCceE-----EE------eeeEEEeCC
Confidence 3445 566555566788888766521 11 1247999998654321 11 256789999
Q ss_pred CCCCeEEEEEEEEe
Q psy4956 249 VPGRAYNISVQTVS 262 (361)
Q Consensus 249 ~p~t~Y~v~V~a~~ 262 (361)
.|++.|.|+|+|.-
T Consensus 86 ~p~t~YCv~Vqa~i 99 (116)
T d2c4fu1 86 DKGENYCFSVQAVI 99 (116)
T ss_dssp CTTCCCEEEEEEEC
T ss_pred CCCCcEEEEEEEEe
Confidence 99999999999974
|
| >d2hfta1 b.1.2.1 (A:1-106) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Extracellular region of human tissue factor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.89 E-value=0.19 Score=32.33 Aligned_cols=78 Identities=14% Similarity=0.154 Sum_probs=53.0
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCCCCCcccEEEEEEECCCCCCCeEEeecCCCCceEEEcC-C--CCCcEEEEEEEEE
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPISGKYSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKD-L--TPGGSYQVQLFSV 165 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~-L--~p~~~Y~v~v~a~ 165 (361)
...+|.|+++.+. +-.-.|.|.++. .-..|.|+|+..++ .|.. .-...... .+.|.+ + .....|.+||+|.
T Consensus 5 ~~~~p~NV~~~S~-Nf~~iL~W~p~~--~~~~YtVqy~~~~~-~W~~-~C~nit~~-~CDlt~~~~~d~~~~Y~aRVrA~ 78 (106)
T d2hfta1 5 NTVAAYNLTWKST-NFKTILEWEPKP--VNQVYTVQISTKSG-DWKS-KCFYTTDT-ECDLTDEIVKDVKQTYLARVFSY 78 (106)
T ss_dssp SCCCCEEEEEEEE-TTEEEEEEECCC--SSEEEEEEEEETTS-CCEE-EEEEESCS-EEECHHHHGGGTTSCEEEEEEEE
T ss_pred ccccceEEEEEEE-cCeEEEEECCCC--CCEEEEEEEEEcCC-chhh-cccCcCcc-ccccccccccCCCCCEEEEEEEE
Confidence 3456889888764 557789999853 23469999988653 3432 22223344 888865 3 4567899999999
Q ss_pred eCCCCcc
Q psy4956 166 YDSKESV 172 (361)
Q Consensus 166 ~~~~~s~ 172 (361)
.++..+.
T Consensus 79 ~~~~~S~ 85 (106)
T d2hfta1 79 PAGNVES 85 (106)
T ss_dssp ECSSCCC
T ss_pred cCCCccc
Confidence 8877664
|
| >d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Extracellular region of human tissue factor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.65 E-value=0.036 Score=36.74 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=46.6
Q ss_pred CCCCCCccEEEEEeCCEEEEEeeCCC-----CCC----------cccEEEEEEECCCCCCCeEEeecCCCCceEEEcCCC
Q psy4956 89 PPDPPTNLSVNVRSGKTAQIFWSPPI-----SGK----------YSGFKLKVISLSEKTPPRIIGFTENPPAGYSLKDLT 153 (361)
Q Consensus 89 ~~~~p~~l~~~~~~~~~v~l~W~~p~-----~~~----------~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 153 (361)
...|| .+.+....+.++.|.-++|. ++. ...|.|.|+..+. ... ... .+.|.+|.
T Consensus 17 ~IGPP-~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s---~~~-----~~~-~~~l~~L~ 86 (116)
T d2c4fu1 17 NLGQP-TIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKK---TAK-----TNT-NEFLIDVD 86 (116)
T ss_dssp BCCCC-CEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCE---EEE-----ESS-SEEEEECC
T ss_pred EeCCc-eEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCc---eEE-----Eee-eEEEeCCC
Confidence 35555 56655556778999988874 111 2469998875432 111 223 78899999
Q ss_pred CCcEEEEEEEEEe
Q psy4956 154 PGGSYQVQLFSVY 166 (361)
Q Consensus 154 p~~~Y~v~v~a~~ 166 (361)
|++.|.|.|+|.-
T Consensus 87 p~t~YCv~Vqa~i 99 (116)
T d2c4fu1 87 KGENYCFSVQAVI 99 (116)
T ss_dssp TTCCCEEEEEEEC
T ss_pred CCCcEEEEEEEEe
Confidence 9999999999984
|
| >d1f6fb1 b.1.2.1 (B:5-100) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.44 E-value=0.067 Score=34.00 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=49.5
Q ss_pred CCccEEEEEeCCEEEEEeeCCCCCC-cccEEEEEEECCCCCCCeEEe-ecCCCCceEEE--cCCCCCcEEEEEEEEEeCC
Q psy4956 93 PTNLSVNVRSGKTAQIFWSPPISGK-YSGFKLKVISLSEKTPPRIIG-FTENPPAGYSL--KDLTPGGSYQVQLFSVYDS 168 (361)
Q Consensus 93 p~~l~~~~~~~~~v~l~W~~p~~~~-~~~y~v~~~~~~~~~~~~~~~-~~~~~~~~~~l--~~L~p~~~Y~v~v~a~~~~ 168 (361)
|.++.-.......+.-+|++..... -..|.+.|+......+..+.. ...... ++.+ ..+.....|.|.|.|.+..
T Consensus 3 P~~~sC~s~~~~~~~C~W~~G~~t~L~T~Y~l~~~~~~~~~~~eCp~y~~~~~~-~C~f~~~~~~~~~~y~i~V~a~N~L 81 (96)
T d1f6fb1 3 PEIHKCRSPDKETFTCWWNPGTDGGLPTNYSLTYSKEGEKTTYECPDYKTSGPN-SCFFSKQYTSIWKIYIITVNATNQM 81 (96)
T ss_dssp CEEEEEEBSSSSCEEEEEECCCCTTSCCEEEEEEEETTEEEEEECSCSSTTCTT-EEEECTTTCCSSCEEEEEEEEEETT
T ss_pred CeEeEEEeCCCCEEEEEeeCCCcCCcCceEEEEEEecCCCccccCCcccCCCce-eEEECCccCccceEEEEEEEEEcCC
Confidence 5566555555667999999954333 367999987643222211111 122233 6666 4567789999999999977
Q ss_pred CCc
Q psy4956 169 KES 171 (361)
Q Consensus 169 ~~s 171 (361)
|..
T Consensus 82 G~~ 84 (96)
T d1f6fb1 82 GSS 84 (96)
T ss_dssp EEE
T ss_pred CCc
Confidence 654
|
| >d1a21a1 b.1.2.1 (A:4-106) Extracellular region of human tissue factor {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Extracellular region of human tissue factor species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=93.63 E-value=0.49 Score=30.16 Aligned_cols=74 Identities=12% Similarity=0.092 Sum_probs=47.5
Q ss_pred CCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCCCceeEEeeccCCCCCcEEEecC--CCC-CCeEEEEEEEE
Q psy4956 185 TPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAPESVLYVEKEGEPPGPAQAAFKG--LVP-GRAYNISVQTV 261 (361)
Q Consensus 185 ~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--L~p-~t~Y~v~V~a~ 261 (361)
.|.|+++...+ -...|.|+|+. . -..|.|+|...++ .+....... ....+.|++ |.+ ...|.++|+|.
T Consensus 3 k~~NV~~~S~N-f~~iL~W~p~~--~-~~~YtVqy~~~~~-~W~~~C~ni----t~~~CDlt~~~~~~~~~~Y~aRVra~ 73 (103)
T d1a21a1 3 RAYNLTWKSTN-FKTILEWEPKS--I-DHVYTVQISTRLE-NWKSKCFLT----AETECDLTDEVVKDVGQTYMARVLSY 73 (103)
T ss_dssp CCEEEEEEEET-TEEEEEEECCC--S-SEEEEEEEECSSS-CCEEEEEEE----SSSEEECHHHHTTCTTSCBEEEEEEE
T ss_pred CCEEEEEEEEc-CceEEEECCCC--C-CeEEEEEEEecCC-CccccccCc----CcceecCcccccccCCCCEEEEEEEe
Confidence 57788887554 46778999752 2 2469999987644 332222211 236788864 445 46799999999
Q ss_pred eCCCCC
Q psy4956 262 SEDEIS 267 (361)
Q Consensus 262 ~~~~~s 267 (361)
.+.+.+
T Consensus 74 ~~~~~s 79 (103)
T d1a21a1 74 PARNGN 79 (103)
T ss_dssp ECCC--
T ss_pred cCCCcc
Confidence 876644
|
| >d1axib1 b.1.2.1 (B:32-130) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.66 E-value=0.21 Score=31.62 Aligned_cols=75 Identities=12% Similarity=0.023 Sum_probs=42.4
Q ss_pred CcceEEEeccCCeEEEEeecCCCC-----Ccce-EEEEEEeCCCCCCceeEEeeccCCCCCcEEEe--cCCCCCCeEEEE
Q psy4956 186 PGKFIVWFRNETTLLVLWQPSYPA-----SIYT-HYKVSIDPPDAPESVLYVEKEGEPPGPAQAAF--KGLVPGRAYNIS 257 (361)
Q Consensus 186 p~~l~~~~~~~~~~~v~W~~~~~~-----~~~~-~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~L~p~t~Y~v~ 257 (361)
|.++.........++..|++.... +.+. .|.+.+............+-. .++.+++.| ..+...+.|.|+
T Consensus 2 P~~~~C~s~~~etftC~W~pG~~~~l~~~~~l~~~Y~~~~~~~~~~~~~eCpdY~--~~~~nsC~F~~~~tsiw~~Y~i~ 79 (99)
T d1axib1 2 PKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYV--SAGENSCYFNSSFTSIAIPYCIK 79 (99)
T ss_dssp CCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSS--TTCTTEEEECGGGCCSSSEEEEE
T ss_pred CeeeeEecCCCcEEEEEecCCCcCCCCCCCceeEEEEEeccccCCCccccCcCCc--cCCccceEeCCcccceeeEEEEE
Confidence 678888888888999999875321 2222 355544333222222211111 233456666 568889999999
Q ss_pred EEEEe
Q psy4956 258 VQTVS 262 (361)
Q Consensus 258 V~a~~ 262 (361)
|.|.+
T Consensus 80 v~a~n 84 (99)
T d1axib1 80 LTSNG 84 (99)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99965
|
| >d2gysa3 b.1.2.1 (A:218-316) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.26 E-value=1.7 Score=26.35 Aligned_cols=79 Identities=16% Similarity=0.223 Sum_probs=45.1
Q ss_pred CCCcceEEEeccCCeEEEEeecCCCCCcceEEEEEEeCCCCC------CceeE--EeeccCCCC-----CcEEEecCCCC
Q psy4956 184 NTPGKFIVWFRNETTLLVLWQPSYPASIYTHYKVSIDPPDAP------ESVLY--VEKEGEPPG-----PAQAAFKGLVP 250 (361)
Q Consensus 184 ~~p~~l~~~~~~~~~~~v~W~~~~~~~~~~~y~v~~~~~~~~------~~~~~--~~~~~~~~~-----~~~~~~~~L~p 250 (361)
..|.||+..-.+...+..+|+.-.....-..|.+.|+..-.. ..... +.... +.. .....+.+-..
T Consensus 2 AqPrNLqC~FdG~~~LsCSWEV~~~Vt~SVsFgLfYk~~P~ag~a~l~re~eCsPv~ke~-~~spyv~~~Cqi~V~dp~~ 80 (99)
T d2gysa3 2 AQPQNLECFFDGAAVLSCSWEVRKEVASSVSFGLFYKPSPDAGSAVLLREEECSPVLREG-LGSLHTRHHCQIPVPDPAT 80 (99)
T ss_dssp TSCEEEEEEECSSSEEEEEEEEEHHHHTTCCEEEEEECC-----CCCCCCEECCCEEEEC-CTTTEEEEEEEEECSCTTT
T ss_pred CCccceEEEeCCcceEEEEEEEeeeEeeeEEEEEEeccCcccccccccchhccChhhhcc-CCCceEEEEeeeeCCCccc
Confidence 368999999999999999997431112224577878743221 11111 11110 110 12345567777
Q ss_pred CCeEEEEEEEEeC
Q psy4956 251 GRAYNISVQTVSE 263 (361)
Q Consensus 251 ~t~Y~v~V~a~~~ 263 (361)
...|.|+|+...+
T Consensus 81 hsqY~VsVrp~ee 93 (99)
T d2gysa3 81 HGQYIVSVQPRRA 93 (99)
T ss_dssp CCEEEEEEEECCC
T ss_pred cceEEEEEEeccc
Confidence 8888888887553
|